DC-Build-Header: dolfin 1.0.0-7 / Sat Feb 02 02:09:12 +0000 2013 DC-Task: logfile:/tmp/dolfin_1.0.0-7_unstable_clang.log version:1.0.0-7 modes:binary-only:clang chroot:unstable source:dolfin esttime:4843 architecture:any DC-Sbuild-call: su user -c 'sbuild -n --apt-update -d unstable -v --chroot-setup-commands=/tmp/switch-to-clang dolfin_1.0.0-7' Could not create '/sbuild-nonexistent/logs': No such file or directory Could not create '/sbuild-nonexistent/logs': No such file or directory sbuild (Debian sbuild) 0.62.5 (13 Jul 2011) on ip-10-28-52-139.ec2.internal ╔══════════════════════════════════════════════════════════════════════════════╗ ║ dolfin 1.0.0-7 (amd64) 02 Feb 2013 02:09 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: dolfin Version: 1.0.0-7 Source Version: 1.0.0-7 Distribution: unstable Architecture: amd64 I: NOTICE: Log filtering will replace 'build/dolfin-Eb0VHZ/dolfin-1.0.0' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/dolfin-Eb0VHZ' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/unstable-amd64-sbuild-5f444a29-8b9e-4767-b2eb-36a461cb83b4' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Ign http://localhost unstable InRelease Get:1 http://localhost unstable Release.gpg [836 B] Get:2 http://localhost unstable Release [227 kB] Ign http://localhost unstable/main Sources/DiffIndex Ign http://localhost unstable/main amd64 Packages/DiffIndex Get:3 http://localhost unstable/main Translation-en/DiffIndex [7876 B] Get:4 http://localhost unstable/main 2013-02-01-2012.11.pdiff [40 B] Get:5 http://localhost unstable/main 2013-02-01-2012.11.pdiff [40 B] Get:6 http://localhost unstable/main Sources [8235 kB] Get:7 http://localhost unstable/main amd64 Packages [8278 kB] Fetched 16.7 MB in 3s (5340 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... NOTICE: 'dolfin' packaging is maintained in the 'Svn' version control system at: svn://svn.debian.org/svn/debian-science/packages/fenics/dolfin/trunk Need to get 9485 kB of source archives. Get:1 http://localhost/debian/ unstable/main dolfin 1.0.0-7 (dsc) [2883 B] Get:2 http://localhost/debian/ unstable/main dolfin 1.0.0-7 (tar) [9444 kB] Get:3 http://localhost/debian/ unstable/main dolfin 1.0.0-7 (diff) [37.8 kB] Fetched 9485 kB in 0s (18.5 MB/s) Download complete and in download only mode Check arch ────────── ┌──────────────────────────────────────────────────────────────────────────────┐ │ Chroot Setup Commands │ └──────────────────────────────────────────────────────────────────────────────┘ /tmp/switch-to-clang ──────────────────── + echo 'Entering customization script...' Entering customization script... + echo 'Add an unstable version of clang as repository' Add an unstable version of clang as repository + echo deb http://clang.ecranbleu.org/apt/debian unstable main + apt-get update Ign http://localhost unstable InRelease Hit http://localhost unstable Release.gpg Hit http://localhost unstable Release Ign http://clang.ecranbleu.org unstable InRelease Ign http://localhost unstable/main Sources/DiffIndex Ign http://clang.ecranbleu.org unstable Release.gpg Get:1 http://clang.ecranbleu.org unstable Release [1616 B] Ign http://localhost unstable/main amd64 Packages/DiffIndex Hit http://localhost unstable/main Translation-en/DiffIndex Get:2 http://clang.ecranbleu.org unstable/main amd64 Packages [2354 B] Hit http://localhost unstable/main Sources Ign http://clang.ecranbleu.org unstable/main Translation-en Hit http://localhost unstable/main amd64 Packages Fetched 3970 B in 1s (2700 B/s) Reading package lists... + echo 'Install of clang' Install of clang + apt-get update Ign http://localhost unstable InRelease Hit http://localhost unstable Release.gpg Hit http://localhost unstable Release Ign http://clang.ecranbleu.org unstable InRelease Ign http://localhost unstable/main Sources/DiffIndex Ign http://clang.ecranbleu.org unstable Release.gpg Ign http://localhost unstable/main amd64 Packages/DiffIndex Hit http://clang.ecranbleu.org unstable Release Ign http://clang.ecranbleu.org unstable/main amd64 Packages/DiffIndex Hit http://localhost unstable/main Translation-en/DiffIndex Hit http://localhost unstable/main Sources Hit http://localhost unstable/main amd64 Packages Hit http://clang.ecranbleu.org unstable/main amd64 Packages Ign http://clang.ecranbleu.org unstable/main Translation-en Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: clang-3.2 compiler-rt libclang-common-dev libexpat1 libffi5 libllvm3.2 libncursesw5 libsqlite3-0 libssl1.0.0 mime-support python python-minimal python2.7 python2.7-minimal Suggested packages: python-doc python-tk python2.7-doc binfmt-support Recommended packages: llvm-3.2-dev file The following NEW packages will be installed: clang clang-3.2 compiler-rt libclang-common-dev libexpat1 libffi5 libllvm3.2 libncursesw5 libsqlite3-0 libssl1.0.0 mime-support python python-minimal python2.7 python2.7-minimal 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. Need to get 25.3 MB of archives. After this operation, 70.1 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libclang-common-dev compiler-rt clang-3.2 clang Get:1 http://localhost/debian/ unstable/main libncursesw5 amd64 5.9-10 [141 kB] Get:2 http://localhost/debian/ unstable/main libssl1.0.0 amd64 1.0.1c-4 [1213 kB] Get:3 http://localhost/debian/ unstable/main libsqlite3-0 amd64 3.7.15.2-1 [463 kB] Get:4 http://localhost/debian/ unstable/main libexpat1 amd64 2.1.0-1 [141 kB] Get:5 http://localhost/debian/ unstable/main libffi5 amd64 3.0.10-3 [24.8 kB] Get:6 http://localhost/debian/ unstable/main libllvm3.2 amd64 3.2-2 [7865 kB] Get:7 http://clang.ecranbleu.org/apt/debian/ unstable/main libclang-common-dev amd64 3.2-2 [303 kB] Get:8 http://localhost/debian/ unstable/main mime-support all 3.52-2 [35.2 kB] Get:9 http://localhost/debian/ unstable/main python2.7-minimal amd64 2.7.3-6 [1783 kB] Get:10 http://localhost/debian/ unstable/main python2.7 amd64 2.7.3-6 [2729 kB] Get:11 http://localhost/debian/ unstable/main python-minimal all 2.7.3-3 [42.5 kB] Get:12 http://localhost/debian/ unstable/main python all 2.7.3-3 [179 kB] Get:13 http://clang.ecranbleu.org/apt/debian/ unstable/main compiler-rt amd64 3.2-2 [312 kB] Get:14 http://clang.ecranbleu.org/apt/debian/ unstable/main clang-3.2 amd64 3.2-2 [10.0 MB] Get:15 http://clang.ecranbleu.org/apt/debian/ unstable/main clang all 3.2-2 [9558 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.3 MB in 7s (3366 kB/s) Selecting previously unselected package libncursesw5:amd64. (Reading database ... 13484 files and directories currently installed.) Unpacking libncursesw5:amd64 (from .../libncursesw5_5.9-10_amd64.deb) ... Selecting previously unselected package libssl1.0.0:amd64. Unpacking libssl1.0.0:amd64 (from .../libssl1.0.0_1.0.1c-4_amd64.deb) ... Selecting previously unselected package libsqlite3-0:amd64. Unpacking libsqlite3-0:amd64 (from .../libsqlite3-0_3.7.15.2-1_amd64.deb) ... Selecting previously unselected package libexpat1:amd64. Unpacking libexpat1:amd64 (from .../libexpat1_2.1.0-1_amd64.deb) ... Selecting previously unselected package libffi5:amd64. Unpacking libffi5:amd64 (from .../libffi5_3.0.10-3_amd64.deb) ... Selecting previously unselected package libllvm3.2:amd64. Unpacking libllvm3.2:amd64 (from .../libllvm3.2_3.2-2_amd64.deb) ... Selecting previously unselected package mime-support. Unpacking mime-support (from .../mime-support_3.52-2_all.deb) ... Selecting previously unselected package python2.7-minimal. Unpacking python2.7-minimal (from .../python2.7-minimal_2.7.3-6_amd64.deb) ... Selecting previously unselected package python2.7. Unpacking python2.7 (from .../python2.7_2.7.3-6_amd64.deb) ... Selecting previously unselected package python-minimal. Unpacking python-minimal (from .../python-minimal_2.7.3-3_all.deb) ... Selecting previously unselected package python. Unpacking python (from .../python_2.7.3-3_all.deb) ... Selecting previously unselected package libclang-common-dev. Unpacking libclang-common-dev (from .../libclang-common-dev_3.2-2_amd64.deb) ... Selecting previously unselected package compiler-rt. Unpacking compiler-rt (from .../compiler-rt_3.2-2_amd64.deb) ... Selecting previously unselected package clang-3.2. Unpacking clang-3.2 (from .../clang-3.2_3.2-2_amd64.deb) ... Selecting previously unselected package clang. Unpacking clang (from .../archives/clang_3.2-2_all.deb) ... Setting up libncursesw5:amd64 (5.9-10) ... Setting up libssl1.0.0:amd64 (1.0.1c-4) ... debconf: unable to initialize frontend: Dialog debconf: (Dialog frontend will not work on a dumb terminal, an emacs shell buffer, or without a controlling terminal.) debconf: falling back to frontend: Readline debconf: unable to initialize frontend: Readline debconf: (This frontend requires a controlling tty.) debconf: falling back to frontend: Teletype Setting up libsqlite3-0:amd64 (3.7.15.2-1) ... Setting up libexpat1:amd64 (2.1.0-1) ... Setting up libffi5:amd64 (3.0.10-3) ... Setting up libllvm3.2:amd64 (3.2-2) ... Setting up mime-support (3.52-2) ... Setting up python2.7-minimal (2.7.3-6) ... Linking and byte-compiling packages for runtime python2.7... Setting up python2.7 (2.7.3-6) ... Setting up python-minimal (2.7.3-3) ... Setting up python (2.7.3-3) ... Setting up libclang-common-dev (3.2-2) ... Setting up compiler-rt (3.2-2) ... Setting up clang-3.2 (3.2-2) ... Setting up clang (3.2-2) ... + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7' + cd /usr/bin + for VERSION in '$VERSIONS' + rm g++-4.6 gcc-4.6 cpp-4.6 + ln -s clang++ g++-4.6 + ln -s clang gcc-4.6 + ln -s clang cpp-4.6 + for VERSION in '$VERSIONS' + rm g++-4.7 gcc-4.7 cpp-4.7 + ln -s clang++ g++-4.7 + ln -s clang gcc-4.7 + ln -s clang cpp-4.7 + cd - /«BUILDDIR» + echo 'Block the installation of new gcc version' Block the installation of new gcc version + echo 'gcc-4.6 hold' + dpkg --set-selections + echo 'cpp-4.6 hold' + dpkg --set-selections + echo 'g++-4.6 hold' + dpkg --set-selections + echo 'gcc-4.7 hold' + dpkg --set-selections + echo 'cpp-4.7 hold' + dpkg --set-selections + echo 'g++-4.7 hold' + dpkg --set-selections + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/switch-to-clang'. Finished processing commands. ──────────────────────────────────────────────────────────────────────────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-YyszYy/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/710 B of archives. After this operation, 0 B of additional disk space will be used. Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14662 files and directories currently installed.) Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs (>= 0.4.90~), debhelper (>= 7), python-all-dev (>= 2.6.6-3~), cmake (>= 2.8.0), swig2.0, python-numpy, pkg-config, libxml2-dev, libboost-dev, libboost-program-options-dev, libboost-filesystem-dev, libboost-serialization-dev, libboost-thread-dev, libboost-iostreams-dev, libboost-mpi-dev, libboost-math-dev, libsuitesparse-dev, ufc (>= 2.0.5-3), python-ufc (>= 2.0.5-3), libptscotch-dev, libpetsc3.2-dev, libslepc3.2-dev, libarmadillo-dev, libcgal-dev Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs (>= 0.4.90~), debhelper (>= 7), python-all-dev (>= 2.6.6-3~), cmake (>= 2.8.0), swig2.0, python-numpy, pkg-config, libxml2-dev, libboost-dev, libboost-program-options-dev, libboost-filesystem-dev, libboost-serialization-dev, libboost-thread-dev, libboost-iostreams-dev, libboost-mpi-dev, libboost-math-dev, libsuitesparse-dev, ufc (>= 2.0.5-3), python-ufc (>= 2.0.5-3), libptscotch-dev, libpetsc3.2-dev, libslepc3.2-dev, libarmadillo-dev, libcgal-dev dpkg-deb: building package `sbuild-build-depends-dolfin-dummy' in `/«BUILDDIR»/resolver-FtSHBO/apt_archive/sbuild-build-depends-dolfin-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install dolfin build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: adduser bsdmainutils cdbs cmake cmake-data debhelper emacsen-common file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.7 groff-base hdf5-helpers html2text intltool-debian libamd2.2.0 libarchive12 libarmadillo-dev libarmadillo3 libarpack2 libarpack2-dev libasprintf-dev libasprintf0c2 libaudio2 libblacs-mpi-dev libblacs-mpi1 libblas-dev libblas3 libblas3gf libboost-date-time1.49-dev libboost-date-time1.49.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.49-dev libboost-filesystem1.49.0 libboost-iostreams-dev libboost-iostreams1.49-dev libboost-iostreams1.49.0 libboost-math-dev libboost-math1.49-dev libboost-math1.49.0 libboost-mpi-dev libboost-mpi1.49-dev libboost-mpi1.49.0 libboost-program-options-dev libboost-program-options1.49-dev libboost-program-options1.49.0 libboost-regex1.49-dev libboost-regex1.49.0 libboost-serialization-dev libboost-serialization1.49-dev libboost-serialization1.49.0 libboost-system1.49-dev libboost-system1.49.0 libboost-thread-dev libboost-thread1.49-dev libboost-thread1.49.0 libboost1.49-dev libbtf1.1.0 libcamd2.2.0 libccolamd2.7.1 libcgal-dev libcgal9 libcholmod1.7.1 libcolamd2.7.1 libcroco3 libcsparse2.2.3 libcurl3 libcurl3-gnutls libcxsparse2.2.3 libdbus-1-3 libdrm2 libexpat1-dev libfontconfig1 libfreetype6 libgcrypt11 libgettextpo-dev libgettextpo0 libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglu1-mesa libgmp-dev libgmpxx4ldbl libgnutls26 libgpg-error0 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-7 libhdf5-openmpi-dev libhypre-2.8.0b libhypre-dev libibverbs-dev libibverbs1 libice6 libicu-dev libicu48 libidn11 libjbig0 libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libklu1.1.0 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblapack3gf liblcms1 libldap-2.4-2 libldl2.0.1 libmagic1 libmng1 libmpfr-dev libmumps-4.10.0 libmumps-dev libnettle4 libnuma1 libopenmpi-dev libopenmpi1.3 libp11-kit0 libparpack2 libparpack2-dev libpcre3 libpetsc3.2 libpetsc3.2-dev libpipeline1 libpng12-0 libpopt0 libprocps0 libpthread-stubs0 libpthread-stubs0-dev libptscotch-5.1 libptscotch-dev libpython2.6 libpython2.7 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtdbus4 libqtgui4 librtmp0 libsasl2-2 libscalapack-mpi-dev libscalapack-mpi1 libscotch-5.1 libscotch-dev libslepc3.2 libslepc3.2-dev libsm6 libspooles-dev libspooles2.2 libssh2-1 libssl-dev libsuitesparse-dev libsuperlu3 libsuperlu3-dev libtasn1-3 libtiff4 libtorque2 libumfpack5.4.0 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-glx0 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxml2 libxml2-dev libxmlrpc-core-c3 libxrender1 libxt6 libxxf86vm1 man-db mpi-default-bin mpi-default-dev openmpi-bin openmpi-common pkg-config po-debconf procps python-all python-all-dev python-dev python-numpy python-support python-ufc python2.6 python2.6-dev python2.6-minimal python2.7-dev qdbus qt4-linguist-tools qt4-qmake swig2.0 ttf-dejavu-core ufc x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: wamerican wordlist whois vacation devscripts dh-make gettext-doc gfortran-multilib gfortran-doc gfortran-4.7-multilib gfortran-4.7-doc libgfortran3-dbg groff libitpp-dev nas libboost-doc libboost-graph1.49-dev libboost1.49-doc libboost-chrono1.49-dev libboost-graph-parallel1.49-dev libboost-locale1.49-dev libboost-python1.49-dev libboost-random1.49-dev libboost-signals1.49-dev libboost-test1.49-dev libboost-timer1.49-dev libboost-wave1.49-dev xsltproc doxygen docbook-xml docbook-xsl default-jdk fop rng-tools libgmp10-doc krb5-doc krb5-user libhdf5-doc icu-doc liblcms-utils libmpfr-doc petsc-dev libpetsc3.2-dbg petsc3.2-doc libluminate-dev libqt4-declarative-folderlistmodel libqt4-declarative-gestures libqt4-declarative-particles libqt4-declarative-shaders qt4-qmlviewer firebird-dev libmysqlclient-dev libpq-dev libsqlite0-dev libsqlite3-dev qt4-dev-tools qt4-doc unixodbc-dev libthai0 qt4-qtconfig scalapack-doc libslepc3.2-dbg slepc3.2-doc spooles-doc libxcb-doc less www-browser libmail-box-perl python-numpy-doc python-numpy-dbg python-nose python2.6-doc binfmt-support swig2.0-examples swig2.0-doc ufc-doc Recommended packages: autotools-dev curl wget lynx-cur autopoint ca-certificates dbus libgl1-mesa-dri libglib2.0-data shared-mime-info krb5-locales libqt4-opengl-dev libqtwebkit-dev libqt4-sql-mysql libqt4-sql-odbc libqt4-sql-psql libqt4-sql-sqlite libqt4-sql-sqlite2 libqt4-sql-ibase libcups2 libsasl2-modules libssl-doc libx11-doc xml-core openmpi-checkpoint libmail-sendmail-perl psmisc The following NEW packages will be installed: adduser bsdmainutils cdbs cmake cmake-data debhelper emacsen-common file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.7 groff-base hdf5-helpers html2text intltool-debian libamd2.2.0 libarchive12 libarmadillo-dev libarmadillo3 libarpack2 libarpack2-dev libasprintf-dev libasprintf0c2 libaudio2 libblacs-mpi-dev libblacs-mpi1 libblas-dev libblas3 libblas3gf libboost-date-time1.49-dev libboost-date-time1.49.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.49-dev libboost-filesystem1.49.0 libboost-iostreams-dev libboost-iostreams1.49-dev libboost-iostreams1.49.0 libboost-math-dev libboost-math1.49-dev libboost-math1.49.0 libboost-mpi-dev libboost-mpi1.49-dev libboost-mpi1.49.0 libboost-program-options-dev libboost-program-options1.49-dev libboost-program-options1.49.0 libboost-regex1.49-dev libboost-regex1.49.0 libboost-serialization-dev libboost-serialization1.49-dev libboost-serialization1.49.0 libboost-system1.49-dev libboost-system1.49.0 libboost-thread-dev libboost-thread1.49-dev libboost-thread1.49.0 libboost1.49-dev libbtf1.1.0 libcamd2.2.0 libccolamd2.7.1 libcgal-dev libcgal9 libcholmod1.7.1 libcolamd2.7.1 libcroco3 libcsparse2.2.3 libcurl3 libcurl3-gnutls libcxsparse2.2.3 libdbus-1-3 libdrm2 libexpat1-dev libfontconfig1 libfreetype6 libgcrypt11 libgettextpo-dev libgettextpo0 libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglu1-mesa libgmp-dev libgmpxx4ldbl libgnutls26 libgpg-error0 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-7 libhdf5-openmpi-dev libhypre-2.8.0b libhypre-dev libibverbs-dev libibverbs1 libice6 libicu-dev libicu48 libidn11 libjbig0 libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libklu1.1.0 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblapack3gf liblcms1 libldap-2.4-2 libldl2.0.1 libmagic1 libmng1 libmpfr-dev libmumps-4.10.0 libmumps-dev libnettle4 libnuma1 libopenmpi-dev libopenmpi1.3 libp11-kit0 libparpack2 libparpack2-dev libpcre3 libpetsc3.2 libpetsc3.2-dev libpipeline1 libpng12-0 libpopt0 libprocps0 libpthread-stubs0 libpthread-stubs0-dev libptscotch-5.1 libptscotch-dev libpython2.6 libpython2.7 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtdbus4 libqtgui4 librtmp0 libsasl2-2 libscalapack-mpi-dev libscalapack-mpi1 libscotch-5.1 libscotch-dev libslepc3.2 libslepc3.2-dev libsm6 libspooles-dev libspooles2.2 libssh2-1 libssl-dev libsuitesparse-dev libsuperlu3 libsuperlu3-dev libtasn1-3 libtiff4 libtorque2 libumfpack5.4.0 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-glx0 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxml2 libxml2-dev libxmlrpc-core-c3 libxrender1 libxt6 libxxf86vm1 man-db mpi-default-bin mpi-default-dev openmpi-bin openmpi-common pkg-config po-debconf procps python-all python-all-dev python-dev python-numpy python-support python-ufc python2.6 python2.6-dev python2.6-minimal python2.7-dev qdbus qt4-linguist-tools qt4-qmake sbuild-build-depends-dolfin-dummy swig2.0 ttf-dejavu-core ufc x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 233 newly installed, 0 to remove and 0 not upgraded. Need to get 191 MB/191 MB of archives. After this operation, 700 MB of additional disk space will be used. Get:1 http://localhost/debian/ unstable/main libpipeline1 amd64 1.2.2-1 [39.9 kB] Get:2 http://localhost/debian/ unstable/main libpopt0 amd64 1.16-7 [56.4 kB] Get:3 http://localhost/debian/ unstable/main libprocps0 amd64 1:3.3.4-2 [58.6 kB] Get:4 http://localhost/debian/ unstable/main groff-base amd64 1.22.1-2 [741 kB] Get:5 http://localhost/debian/ unstable/main bsdmainutils amd64 9.0.4 [210 kB] Get:6 http://localhost/debian/ unstable/main man-db amd64 2.6.3-3 [898 kB] Get:7 http://localhost/debian/ unstable/main libasprintf0c2 amd64 0.18.1.1-10 [27.2 kB] Get:8 http://localhost/debian/ unstable/main libgpg-error0 amd64 1.10-3.1 [77.9 kB] Get:9 http://localhost/debian/ unstable/main libgcrypt11 amd64 1.5.0-3 [298 kB] Get:10 http://localhost/debian/ unstable/main libp11-kit0 amd64 0.12-3 [52.8 kB] Get:11 http://localhost/debian/ unstable/main libtasn1-3 amd64 2.13-2 [67.7 kB] Get:12 http://localhost/debian/ unstable/main libgnutls26 amd64 2.12.20-3 [618 kB] Get:13 http://localhost/debian/ unstable/main libkeyutils1 amd64 1.5.5-4 [8690 B] Get:14 http://localhost/debian/ unstable/main libkrb5support0 amd64 1.10.1+dfsg-3 [49.2 kB] Get:15 http://localhost/debian/ unstable/main libk5crypto3 amd64 1.10.1+dfsg-3 [112 kB] Get:16 http://localhost/debian/ unstable/main libkrb5-3 amd64 1.10.1+dfsg-3 [394 kB] Get:17 http://localhost/debian/ unstable/main libgssapi-krb5-2 amd64 1.10.1+dfsg-3 [148 kB] Get:18 http://localhost/debian/ unstable/main libidn11 amd64 1.25-2 [178 kB] Get:19 http://localhost/debian/ unstable/main libsasl2-2 amd64 2.1.25.dfsg1-6 [120 kB] Get:20 http://localhost/debian/ unstable/main libldap-2.4-2 amd64 2.4.31-1 [243 kB] Get:21 http://localhost/debian/ unstable/main libmagic1 amd64 5.11-2 [202 kB] Get:22 http://localhost/debian/ unstable/main libpcre3 amd64 1:8.31-2 [247 kB] Get:23 http://localhost/debian/ unstable/main libxml2 amd64 2.8.0+dfsg1-7 [903 kB] Get:24 http://localhost/debian/ unstable/main libnettle4 amd64 2.4-3 [149 kB] Get:25 http://localhost/debian/ unstable/main libarchive12 amd64 3.0.4-2 [303 kB] Get:26 http://localhost/debian/ unstable/main libxau6 amd64 1:1.0.7-1 [18.8 kB] Get:27 http://localhost/debian/ unstable/main x11-common all 1:7.7+1 [278 kB] Get:28 http://localhost/debian/ unstable/main libice6 amd64 2:1.0.8-2 [63.1 kB] Get:29 http://localhost/debian/ unstable/main libsm6 amd64 2:1.2.1-2 [34.2 kB] Get:30 http://localhost/debian/ unstable/main libxdmcp6 amd64 1:1.1.1-1 [26.3 kB] Get:31 http://localhost/debian/ unstable/main libxcb1 amd64 1.8.1-2 [50.1 kB] Get:32 http://localhost/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB] Get:33 http://localhost/debian/ unstable/main libx11-6 amd64 2:1.5.0-1 [901 kB] Get:34 http://localhost/debian/ unstable/main libxt6 amd64 1:1.1.3-1 [211 kB] Get:35 http://localhost/debian/ unstable/main libaudio2 amd64 1.9.3-5 [86.4 kB] Get:36 http://localhost/debian/ unstable/main libglib2.0-0 amd64 2.33.12+really2.32.4-5 [1838 kB] Get:37 http://localhost/debian/ unstable/main libcroco3 amd64 0.6.6-2 [134 kB] Get:38 http://localhost/debian/ unstable/main librtmp0 amd64 2.4+20111222.git4e06e21-1 [62.3 kB] Get:39 http://localhost/debian/ unstable/main libssh2-1 amd64 1.4.2-1.1 [133 kB] Get:40 http://localhost/debian/ unstable/main libcurl3 amd64 7.28.0-3 [331 kB] Get:41 http://localhost/debian/ unstable/main libcurl3-gnutls amd64 7.28.0-3 [322 kB] Get:42 http://localhost/debian/ unstable/main libdbus-1-3 amd64 1.6.8-1 [173 kB] Get:43 http://localhost/debian/ unstable/main libdrm2 amd64 2.4.40-1~deb7u2 [459 kB] Get:44 http://localhost/debian/ unstable/main libfreetype6 amd64 2.4.9-1.1 [451 kB] Get:45 http://localhost/debian/ unstable/main ttf-dejavu-core all 2.33-3 [1021 kB] Get:46 http://localhost/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB] Get:47 http://localhost/debian/ unstable/main libfontconfig1 amd64 2.9.0-7.1 [300 kB] Get:48 http://localhost/debian/ unstable/main libunistring0 amd64 0.9.3-5 [434 kB] Get:49 http://localhost/debian/ unstable/main libgettextpo0 amd64 0.18.1.1-10 [145 kB] Get:50 http://localhost/debian/ unstable/main libgfortran3 amd64 4.7.2-5 [351 kB] Get:51 http://localhost/debian/ unstable/main libglapi-mesa amd64 8.0.5-3 [46.6 kB] Get:52 http://localhost/debian/ unstable/main libx11-xcb1 amd64 2:1.5.0-1 [139 kB] Get:53 http://localhost/debian/ unstable/main libxcb-glx0 amd64 1.8.1-2 [32.1 kB] Get:54 http://localhost/debian/ unstable/main libxfixes3 amd64 1:5.0-4 [21.5 kB] Get:55 http://localhost/debian/ unstable/main libxdamage1 amd64 1:1.1.3-2 [14.3 kB] Get:56 http://localhost/debian/ unstable/main libxext6 amd64 2:1.3.1-2 [55.3 kB] Get:57 http://localhost/debian/ unstable/main libxxf86vm1 amd64 1:1.1.2-1 [19.0 kB] Get:58 http://localhost/debian/ unstable/main libgl1-mesa-glx amd64 8.0.5-3 [134 kB] Get:59 http://localhost/debian/ unstable/main libglu1-mesa amd64 8.0.5-3 [190 kB] Get:60 http://localhost/debian/ unstable/main libgmpxx4ldbl amd64 2:5.0.5+dfsg-2 [21.6 kB] Get:61 http://localhost/debian/ unstable/main libicu48 amd64 4.8.1.1-10 [4741 kB] Get:62 http://localhost/debian/ unstable/main libjpeg8 amd64 8d-1 [134 kB] Get:63 http://localhost/debian/ unstable/main liblcms1 amd64 1.19.dfsg-1.2 [113 kB] Get:64 http://localhost/debian/ unstable/main libmng1 amd64 1.0.10-3 [235 kB] Get:65 http://localhost/debian/ unstable/main libpng12-0 amd64 1.2.49-3 [190 kB] Get:66 http://localhost/debian/ unstable/main libqtcore4 amd64 4:4.8.2+dfsg-10 [2108 kB] Get:67 http://localhost/debian/ unstable/main libqt4-xml amd64 4:4.8.2+dfsg-10 [131 kB] Get:68 http://localhost/debian/ unstable/main libqtdbus4 amd64 4:4.8.2+dfsg-10 [219 kB] Get:69 http://localhost/debian/ unstable/main libqt4-network amd64 4:4.8.2+dfsg-10 [569 kB] Get:70 http://localhost/debian/ unstable/main libqt4-script amd64 4:4.8.2+dfsg-10 [814 kB] Get:71 http://localhost/debian/ unstable/main libqt4-sql amd64 4:4.8.2+dfsg-10 [137 kB] Get:72 http://localhost/debian/ unstable/main libqt4-xmlpatterns amd64 4:4.8.2+dfsg-10 [1049 kB] Get:73 http://localhost/debian/ unstable/main fontconfig amd64 2.9.0-7.1 [348 kB] Get:74 http://localhost/debian/ unstable/main libjbig0 amd64 2.0-2 [32.2 kB] Get:75 http://localhost/debian/ unstable/main libtiff4 amd64 3.9.6-11 [202 kB] Get:76 http://localhost/debian/ unstable/main libxrender1 amd64 1:0.9.7-1 [32.2 kB] Get:77 http://localhost/debian/ unstable/main libqtgui4 amd64 4:4.8.2+dfsg-10 [4050 kB] Get:78 http://localhost/debian/ unstable/main libqt4-declarative amd64 4:4.8.2+dfsg-10 [1105 kB] Get:79 http://localhost/debian/ unstable/main libqt4-designer amd64 4:4.8.2+dfsg-10 [3648 kB] Get:80 http://localhost/debian/ unstable/main libqt4-help amd64 4:4.8.2+dfsg-10 [238 kB] Get:81 http://localhost/debian/ unstable/main libqt4-opengl amd64 4:4.8.2+dfsg-10 [337 kB] Get:82 http://localhost/debian/ unstable/main libqt4-qt3support amd64 4:4.8.2+dfsg-10 [1071 kB] Get:83 http://localhost/debian/ unstable/main libqt4-scripttools amd64 4:4.8.2+dfsg-10 [257 kB] Get:84 http://localhost/debian/ unstable/main libqt4-svg amd64 4:4.8.2+dfsg-10 [176 kB] Get:85 http://localhost/debian/ unstable/main libqt4-test amd64 4:4.8.2+dfsg-10 [100 kB] Get:86 http://localhost/debian/ unstable/main adduser all 3.113+nmu3 [264 kB] Get:87 http://localhost/debian/ unstable/main libboost-iostreams1.49.0 amd64 1.49.0-3.1 [57.6 kB] Get:88 http://localhost/debian/ unstable/main procps amd64 1:3.3.4-2 [259 kB] Get:89 http://localhost/debian/ unstable/main file amd64 5.11-2 [51.8 kB] Get:90 http://localhost/debian/ unstable/main gettext-base amd64 0.18.1.1-10 [154 kB] Get:91 http://localhost/debian/ unstable/main python-support all 1.0.15 [33.6 kB] Get:92 http://localhost/debian/ unstable/main python2.6-minimal amd64 2.6.8-1.1 [1547 kB] Get:93 http://localhost/debian/ unstable/main cdbs all 0.4.120 [80.4 kB] Get:94 http://localhost/debian/ unstable/main libxmlrpc-core-c3 amd64 1.16.33-3.2 [186 kB] Get:95 http://localhost/debian/ unstable/main emacsen-common all 2.0.5 [20.9 kB] Get:96 http://localhost/debian/ unstable/main cmake-data all 2.8.9-1 [1359 kB] Get:97 http://localhost/debian/ unstable/main cmake amd64 2.8.9-1 [4730 kB] Get:98 http://localhost/debian/ unstable/main html2text amd64 1.3.2a-15 [103 kB] Get:99 http://localhost/debian/ unstable/main libasprintf-dev amd64 0.18.1.1-10 [26.8 kB] Get:100 http://localhost/debian/ unstable/main libgettextpo-dev amd64 0.18.1.1-10 [184 kB] Get:101 http://localhost/debian/ unstable/main gettext amd64 0.18.1.1-10 [1815 kB] Get:102 http://localhost/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB] Get:103 http://localhost/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB] Get:104 http://localhost/debian/ unstable/main debhelper all 9.20120909 [705 kB] Get:105 http://localhost/debian/ unstable/main gfortran-4.7 amd64 4.7.2-5 [6173 kB] Get:106 http://localhost/debian/ unstable/main gfortran amd64 4:4.7.2-1 [1130 B] Get:107 http://localhost/debian/ unstable/main hdf5-helpers amd64 1.8.8-9 [32.5 kB] Get:108 http://localhost/debian/ unstable/main libamd2.2.0 amd64 1:3.4.0-3 [29.2 kB] Get:109 http://localhost/debian/ unstable/main libblas3 amd64 1.2.20110419-5 [293 kB] Get:110 http://localhost/debian/ unstable/main liblapack3 amd64 3.4.1-6 [5036 kB] Get:111 http://localhost/debian/ unstable/main libarmadillo3 amd64 1:3.2.3+dfsg-1 [18.7 kB] Get:112 http://localhost/debian/ unstable/main libarmadillo-dev amd64 1:3.2.3+dfsg-1 [291 kB] Get:113 http://localhost/debian/ unstable/main libibverbs1 amd64 1.1.6-1 [35.3 kB] Get:114 http://localhost/debian/ unstable/main libnuma1 amd64 2.0.8-1 [34.7 kB] Get:115 http://localhost/debian/ unstable/main libtorque2 amd64 2.4.16+dfsg-1 [120 kB] Get:116 http://localhost/debian/ unstable/main libopenmpi1.3 amd64 1.4.5-1 [1436 kB] Get:117 http://localhost/debian/ unstable/main libparpack2 amd64 3.1.1-2.1 [237 kB] Get:118 http://localhost/debian/ unstable/main libarpack2 amd64 3.1.1-2.1 [134 kB] Get:119 http://localhost/debian/ unstable/main libblas-dev amd64 1.2.20110419-5 [312 kB] Get:120 http://localhost/debian/ unstable/main libblas3gf all 1.2.20110419-5 [8090 B] Get:121 http://localhost/debian/ unstable/main libboost1.49-dev amd64 1.49.0-3.1 [9203 kB] Get:122 http://localhost/debian/ unstable/main libboost-date-time1.49.0 amd64 1.49.0-3.1 [46.7 kB] Get:123 http://localhost/debian/ unstable/main libboost-serialization1.49.0 amd64 1.49.0-3.1 [212 kB] Get:124 http://localhost/debian/ unstable/main libboost-serialization1.49-dev amd64 1.49.0-3.1 [316 kB] Get:125 http://localhost/debian/ unstable/main libboost-date-time1.49-dev amd64 1.49.0-3.1 [49.5 kB] Get:126 http://localhost/debian/ unstable/main libboost-dev amd64 1.49.0.1 [3022 B] Get:127 http://localhost/debian/ unstable/main libboost-system1.49.0 amd64 1.49.0-3.1 [33.0 kB] Get:128 http://localhost/debian/ unstable/main libboost-filesystem1.49.0 amd64 1.49.0-3.1 [77.2 kB] Get:129 http://localhost/debian/ unstable/main libboost-system1.49-dev amd64 1.49.0-3.1 [34.7 kB] Get:130 http://localhost/debian/ unstable/main libboost-filesystem1.49-dev amd64 1.49.0-3.1 [104 kB] Get:131 http://localhost/debian/ unstable/main libboost-filesystem-dev amd64 1.49.0.1 [2744 B] Get:132 http://localhost/debian/ unstable/main libboost-regex1.49.0 amd64 1.49.0-3.1 [449 kB] Get:133 http://localhost/debian/ unstable/main libicu-dev amd64 4.8.1.1-10 [5710 kB] Get:134 http://localhost/debian/ unstable/main libboost-regex1.49-dev amd64 1.49.0-3.1 [661 kB] Get:135 http://localhost/debian/ unstable/main libboost-iostreams1.49-dev amd64 1.49.0-3.1 [73.7 kB] Get:136 http://localhost/debian/ unstable/main libboost-iostreams-dev amd64 1.49.0.1 [2704 B] Get:137 http://localhost/debian/ unstable/main libboost-math1.49.0 amd64 1.49.0-3.1 [473 kB] Get:138 http://localhost/debian/ unstable/main libboost-math1.49-dev amd64 1.49.0-3.1 [1872 kB] Get:139 http://localhost/debian/ unstable/main libboost-math-dev amd64 1.49.0.1 [2914 B] Get:140 http://localhost/debian/ unstable/main libboost-mpi1.49.0 amd64 1.49.0-3.1 [82.8 kB] Get:141 http://localhost/debian/ unstable/main openmpi-common all 1.4.5-1 [101 kB] Get:142 http://localhost/debian/ unstable/main libibverbs-dev amd64 1.1.6-1 [84.8 kB] Get:143 http://localhost/debian/ unstable/main libopenmpi-dev amd64 1.4.5-1 [2778 kB] Get:144 http://localhost/debian/ unstable/main mpi-default-dev amd64 1.0.1 [3604 B] Get:145 http://localhost/debian/ unstable/main libboost-mpi1.49-dev amd64 1.49.0-3.1 [527 kB] Get:146 http://localhost/debian/ unstable/main libboost-mpi-dev amd64 1.49.0.1 [2806 B] Get:147 http://localhost/debian/ unstable/main libboost-program-options1.49.0 amd64 1.49.0-3.1 [156 kB] Get:148 http://localhost/debian/ unstable/main libboost-program-options1.49-dev amd64 1.49.0-3.1 [223 kB] Get:149 http://localhost/debian/ unstable/main libboost-program-options-dev amd64 1.49.0.1 [2732 B] Get:150 http://localhost/debian/ unstable/main libboost-serialization-dev amd64 1.49.0.1 [2940 B] Get:151 http://localhost/debian/ unstable/main libboost-thread1.49.0 amd64 1.49.0-3.1 [61.0 kB] Get:152 http://localhost/debian/ unstable/main libboost-thread1.49-dev amd64 1.49.0-3.1 [67.1 kB] Get:153 http://localhost/debian/ unstable/main libboost-thread-dev amd64 1.49.0.1 [2736 B] Get:154 http://localhost/debian/ unstable/main libbtf1.1.0 amd64 1:3.4.0-3 [13.5 kB] Get:155 http://localhost/debian/ unstable/main libcamd2.2.0 amd64 1:3.4.0-3 [28.5 kB] Get:156 http://localhost/debian/ unstable/main libccolamd2.7.1 amd64 1:3.4.0-3 [30.5 kB] Get:157 http://localhost/debian/ unstable/main libcgal9 amd64 4.0.2-1 [376 kB] Get:158 http://localhost/debian/ unstable/main libgmp-dev amd64 2:5.0.5+dfsg-2 [610 kB] Get:159 http://localhost/debian/ unstable/main libmpfr-dev amd64 3.1.0-5 [602 kB] Get:160 http://localhost/debian/ unstable/main qdbus amd64 4:4.8.2+dfsg-10 [68.8 kB] Get:161 http://localhost/debian/ unstable/main libqt4-dbus amd64 4:4.8.2+dfsg-10 [46.1 kB] Get:162 http://localhost/debian/ unstable/main libqt4-dev-bin amd64 4:4.8.2+dfsg-10 [1630 kB] Get:163 http://localhost/debian/ unstable/main qt4-linguist-tools amd64 4:4.8.2+dfsg-10 [852 kB] Get:164 http://localhost/debian/ unstable/main qt4-qmake amd64 4:4.8.2+dfsg-10 [1267 kB] Get:165 http://localhost/debian/ unstable/main libqt4-dev amd64 4:4.8.2+dfsg-10 [918 kB] Get:166 http://localhost/debian/ unstable/main zlib1g-dev amd64 1:1.2.7.dfsg-13 [215 kB] Get:167 http://localhost/debian/ unstable/main libcgal-dev amd64 4.0.2-1 [4900 kB] Get:168 http://localhost/debian/ unstable/main libcolamd2.7.1 amd64 1:3.4.0-3 [22.5 kB] Get:169 http://localhost/debian/ unstable/main libcholmod1.7.1 amd64 1:3.4.0-3 [409 kB] Get:170 http://localhost/debian/ unstable/main libcsparse2.2.3 amd64 1:3.4.0-3 [36.7 kB] Get:171 http://localhost/debian/ unstable/main libcxsparse2.2.3 amd64 1:3.4.0-3 [112 kB] Get:172 http://localhost/debian/ unstable/main libexpat1-dev amd64 2.1.0-1 [229 kB] Get:173 http://localhost/debian/ unstable/main libjpeg8-dev amd64 8d-1 [242 kB] Get:174 http://localhost/debian/ unstable/main libklu1.1.0 amd64 1:3.4.0-3 [107 kB] Get:175 http://localhost/debian/ unstable/main liblapack-dev amd64 3.4.1-6 [5549 kB] Get:176 http://localhost/debian/ unstable/main liblapack3gf all 3.4.1-6 [10.2 kB] Get:177 http://localhost/debian/ unstable/main libldl2.0.1 amd64 1:3.4.0-3 [12.9 kB] Get:178 http://localhost/debian/ unstable/main libpthread-stubs0 amd64 0.3-3 [3228 B] Get:179 http://localhost/debian/ unstable/main libpthread-stubs0-dev amd64 0.3-3 [3998 B] Get:180 http://localhost/debian/ unstable/main python2.6 amd64 2.6.8-1.1 [2509 kB] Get:181 http://localhost/debian/ unstable/main libpython2.6 amd64 2.6.8-1.1 [1104 kB] Get:182 http://localhost/debian/ unstable/main libpython2.7 amd64 2.7.3-6 [1208 kB] Get:183 http://localhost/debian/ unstable/main libssl-dev amd64 1.0.1c-4 [1698 kB] Get:184 http://localhost/debian/ unstable/main libumfpack5.4.0 amd64 1:3.4.0-3 [360 kB] Get:185 http://localhost/debian/ unstable/main libsuitesparse-dev amd64 1:3.4.0-3 [1506 kB] Get:186 http://localhost/debian/ unstable/main libsuperlu3 amd64 3.0+20070106-3 [170 kB] Get:187 http://localhost/debian/ unstable/main libsuperlu3-dev amd64 3.0+20070106-3 [573 kB] Get:188 http://localhost/debian/ unstable/main xorg-sgml-doctools all 1:1.10-1 [24.1 kB] Get:189 http://localhost/debian/ unstable/main x11proto-core-dev all 7.0.23-1 [774 kB] Get:190 http://localhost/debian/ unstable/main libxau-dev amd64 1:1.0.7-1 [21.7 kB] Get:191 http://localhost/debian/ unstable/main libxdmcp-dev amd64 1:1.1.1-1 [42.3 kB] Get:192 http://localhost/debian/ unstable/main x11proto-input-dev all 2.2-1 [172 kB] Get:193 http://localhost/debian/ unstable/main x11proto-kb-dev all 1.0.6-2 [269 kB] Get:194 http://localhost/debian/ unstable/main xtrans-dev all 1.2.7-1 [112 kB] Get:195 http://localhost/debian/ unstable/main libxcb1-dev amd64 1.8.1-2 [88.1 kB] Get:196 http://localhost/debian/ unstable/main libx11-dev amd64 2:1.5.0-1 [1037 kB] Get:197 http://localhost/debian/ unstable/main libxml2-dev amd64 2.8.0+dfsg1-7 [899 kB] Get:198 http://localhost/debian/ unstable/main pkg-config amd64 0.26-1 [59.5 kB] Get:199 http://localhost/debian/ unstable/main python-all all 2.7.3-3 [876 B] Get:200 http://localhost/debian/ unstable/main python2.7-dev amd64 2.7.3-6 [22.8 MB] Get:201 http://localhost/debian/ unstable/main python-dev all 2.7.3-3 [916 B] Get:202 http://localhost/debian/ unstable/main python2.6-dev amd64 2.6.8-1.1 [4577 kB] Get:203 http://localhost/debian/ unstable/main python-all-dev all 2.7.3-3 [894 B] Get:204 http://localhost/debian/ unstable/main python-numpy amd64 1:1.6.2-1 [2631 kB] Get:205 http://localhost/debian/ unstable/main swig2.0 amd64 2.0.8-1 [1430 kB] Get:206 http://localhost/debian/ unstable/main libparpack2-dev amd64 3.1.1-2.1 [338 kB] Get:207 http://localhost/debian/ unstable/main libarpack2-dev amd64 3.1.1-2.1 [185 kB] Get:208 http://localhost/debian/ unstable/main openmpi-bin amd64 1.4.5-1 [166 kB] Get:209 http://localhost/debian/ unstable/main mpi-default-bin amd64 1.0.1 [2990 B] Get:210 http://localhost/debian/ unstable/main libblacs-mpi1 amd64 1.1-31 [68.4 kB] Get:211 http://localhost/debian/ unstable/main libblacs-mpi-dev amd64 1.1-31 [76.5 kB] Get:212 http://localhost/debian/ unstable/main libhdf5-openmpi-7 amd64 1.8.8-9 [1459 kB] Get:213 http://localhost/debian/ unstable/main libhdf5-openmpi-dev amd64 1.8.8-9 [2607 kB] Get:214 http://localhost/debian/ unstable/main libhdf5-mpi-dev amd64 1.8.8-9 [24.3 kB] Get:215 http://localhost/debian/ unstable/main libhypre-2.8.0b amd64 2.8.0b-1 [1778 kB] Get:216 http://localhost/debian/ unstable/main libhypre-dev all 2.8.0b-1 [171 kB] Get:217 http://localhost/debian/ unstable/main libscalapack-mpi1 amd64 1.8.0-9 [3201 kB] Get:218 http://localhost/debian/ unstable/main libmumps-4.10.0 amd64 4.10.0.dfsg-3 [2109 kB] Get:219 http://localhost/debian/ unstable/main libscalapack-mpi-dev amd64 1.8.0-9 [3548 kB] Get:220 http://localhost/debian/ unstable/main libmumps-dev amd64 4.10.0.dfsg-3 [2251 kB] Get:221 http://localhost/debian/ unstable/main libscotch-5.1 amd64 5.1.12b.dfsg-2 [808 kB] Get:222 http://localhost/debian/ unstable/main libptscotch-5.1 amd64 5.1.12b.dfsg-2 [1299 kB] Get:223 http://localhost/debian/ unstable/main libspooles2.2 amd64 2.2-9 [556 kB] Get:224 http://localhost/debian/ unstable/main libpetsc3.2 amd64 3.2.dfsg-6 [2775 kB] Get:225 http://localhost/debian/ unstable/main libspooles-dev amd64 2.2-9 [791 kB] Get:226 http://localhost/debian/ unstable/main libscotch-dev amd64 5.1.12b.dfsg-2 [3885 kB] Get:227 http://localhost/debian/ unstable/main libptscotch-dev amd64 5.1.12b.dfsg-2 [6608 kB] Get:228 http://localhost/debian/ unstable/main libpetsc3.2-dev amd64 3.2.dfsg-6 [5878 kB] Get:229 http://localhost/debian/ unstable/main libslepc3.2 amd64 3.2-p5-1 [378 kB] Get:230 http://localhost/debian/ unstable/main libslepc3.2-dev amd64 3.2-p5-1 [1137 kB] Get:231 http://localhost/debian/ unstable/main ufc all 2.0.5-3 [8850 B] Get:232 http://localhost/debian/ unstable/main python-ufc amd64 2.0.5-3 [97.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 191 MB in 9s (20.3 MB/s) Selecting previously unselected package libpipeline1:amd64. (Reading database ... 14662 files and directories currently installed.) Unpacking libpipeline1:amd64 (from .../libpipeline1_1.2.2-1_amd64.deb) ... Selecting previously unselected package libpopt0:amd64. Unpacking libpopt0:amd64 (from .../libpopt0_1.16-7_amd64.deb) ... Selecting previously unselected package libprocps0:amd64. Unpacking libprocps0:amd64 (from .../libprocps0_1%3a3.3.4-2_amd64.deb) ... Selecting previously unselected package groff-base. Unpacking groff-base (from .../groff-base_1.22.1-2_amd64.deb) ... Selecting previously unselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_9.0.4_amd64.deb) ... Selecting previously unselected package man-db. Unpacking man-db (from .../man-db_2.6.3-3_amd64.deb) ... Selecting previously unselected package libasprintf0c2:amd64. Unpacking libasprintf0c2:amd64 (from .../libasprintf0c2_0.18.1.1-10_amd64.deb) ... Selecting previously unselected package libgpg-error0:amd64. 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Setting up procps (1:3.3.4-2) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up file (5.11-2) ... Setting up gettext-base (0.18.1.1-10) ... Setting up python-support (1.0.15) ... Setting up python2.6-minimal (2.6.8-1.1) ... Setting up cdbs (0.4.120) ... Setting up libxmlrpc-core-c3 (1.16.33-3.2) ... Setting up emacsen-common (2.0.5) ... Setting up cmake-data (2.8.9-1) ... Install cmake-data for emacs Setting up cmake (2.8.9-1) ... Setting up html2text (1.3.2a-15) ... Setting up libasprintf-dev:amd64 (0.18.1.1-10) ... Setting up libgettextpo-dev:amd64 (0.18.1.1-10) ... Setting up gettext (0.18.1.1-10) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2) ... Setting up debhelper (9.20120909) ... Setting up gfortran-4.7 (4.7.2-5) ... 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Processing triggers for python-support ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 2.6.32-5-xen-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.22-7.1 dpkg-dev_1.16.9 g++-4.6_4.6.3-15 g++-4.7_4.7.2-5 gcc-4.6_4.6.3-15 gcc-4.7_4.7.2-5 libc6-dev_2.13-38 libstdc++6_4.7.2-5 libstdc++6-4.6-dev_4.6.3-15 libstdc++6-4.7-dev_4.7.2-5 linux-libc-dev_3.2.35-2 Package versions: adduser_3.113+nmu3 apt_0.9.7.7 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-0.1 binutils_2.22-7.1 bsdmainutils_9.0.4 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.120 clang_3.2-2 clang-3.2_3.2-2 cmake_2.8.9-1 cmake-data_2.8.9-1 compiler-rt_3.2-2 coreutils_8.20-3 cpp_4:4.7.2-1 cpp-4.6_4.6.3-15 cpp-4.7_4.7.2-5 dash_0.5.7-3 debconf_1.5.49 debconf-i18n_1.5.49 debfoster_2.7-1.2 debhelper_9.20120909 debian-archive-keyring_2012.4 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libblacs-mpi1_1.1-31 libblas-dev_1.2.20110419-5 libblas3_1.2.20110419-5 libblas3gf_1.2.20110419-5 libblkid1_2.20.1-5.3 libboost-date-time1.49-dev_1.49.0-3.1 libboost-date-time1.49.0_1.49.0-3.1 libboost-dev_1.49.0.1 libboost-filesystem-dev_1.49.0.1 libboost-filesystem1.49-dev_1.49.0-3.1 libboost-filesystem1.49.0_1.49.0-3.1 libboost-iostreams-dev_1.49.0.1 libboost-iostreams1.49-dev_1.49.0-3.1 libboost-iostreams1.49.0_1.49.0-3.1 libboost-math-dev_1.49.0.1 libboost-math1.49-dev_1.49.0-3.1 libboost-math1.49.0_1.49.0-3.1 libboost-mpi-dev_1.49.0.1 libboost-mpi1.49-dev_1.49.0-3.1 libboost-mpi1.49.0_1.49.0-3.1 libboost-program-options-dev_1.49.0.1 libboost-program-options1.49-dev_1.49.0-3.1 libboost-program-options1.49.0_1.49.0-3.1 libboost-regex1.49-dev_1.49.0-3.1 libboost-regex1.49.0_1.49.0-3.1 libboost-serialization-dev_1.49.0.1 libboost-serialization1.49-dev_1.49.0-3.1 libboost-serialization1.49.0_1.49.0-3.1 libboost-system1.49-dev_1.49.0-3.1 libboost-system1.49.0_1.49.0-3.1 libboost-thread-dev_1.49.0.1 libboost-thread1.49-dev_1.49.0-3.1 libboost-thread1.49.0_1.49.0-3.1 libboost1.49-dev_1.49.0-3.1 libbtf1.1.0_1:3.4.0-3 libbz2-1.0_1.0.6-4 libc-bin_2.13-38 libc-dev-bin_2.13-38 libc6_2.13-38 libc6-dev_2.13-38 libcamd2.2.0_1:3.4.0-3 libccolamd2.7.1_1:3.4.0-3 libcgal-dev_4.0.2-1 libcgal9_4.0.2-1 libcholmod1.7.1_1:3.4.0-3 libclang-common-dev_3.2-2 libclass-isa-perl_0.36-5 libcolamd2.7.1_1:3.4.0-3 libcomerr2_1.42.5-1 libcroco3_0.6.6-2 libcsparse2.2.3_1:3.4.0-3 libcurl3_7.28.0-3 libcurl3-gnutls_7.28.0-3 libcxsparse2.2.3_1:3.4.0-3 libdb5.1_5.1.29-5 libdbus-1-3_1.6.8-1 libdpkg-perl_1.16.9 libdrm2_2.4.40-1~deb7u2 libexpat1_2.1.0-1 libexpat1-dev_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-2 libfontconfig1_2.9.0-7.1 libfreetype6_2.4.9-1.1 libgc1c2_1:7.1-9.1 libgcc1_1:4.7.2-5 libgcrypt11_1.5.0-3 libgdbm3_1.8.3-11 libgettextpo-dev_0.18.1.1-10 libgettextpo0_0.18.1.1-10 libgfortran3_4.7.2-5 libgl1-mesa-glx_8.0.5-3 libglapi-mesa_8.0.5-3 libglib2.0-0_2.33.12+really2.32.4-5 libglu1-mesa_8.0.5-3 libgmp-dev_2:5.0.5+dfsg-2 libgmp10_2:5.0.5+dfsg-2 libgmpxx4ldbl_2:5.0.5+dfsg-2 libgnutls26_2.12.20-3 libgomp1_4.7.2-5 libgpg-error0_1.10-3.1 libgpm2_1.20.4-6 libgssapi-krb5-2_1.10.1+dfsg-3 libhdf5-mpi-dev_1.8.8-9 libhdf5-openmpi-7_1.8.8-9 libhdf5-openmpi-dev_1.8.8-9 libhypre-2.8.0b_2.8.0b-1 libhypre-dev_2.8.0b-1 libibverbs-dev_1.1.6-1 libibverbs1_1.1.6-1 libice6_2:1.0.8-2 libicu-dev_4.8.1.1-10 libicu48_4.8.1.1-10 libidn11_1.25-2 libitm1_4.7.2-5 libjbig0_2.0-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 libk5crypto3_1.10.1+dfsg-3 libkeyutils1_1.5.5-4 libklu1.1.0_1:3.4.0-3 libkrb5-3_1.10.1+dfsg-3 libkrb5support0_1.10.1+dfsg-3 liblapack-dev_3.4.1-6 liblapack3_3.4.1-6 liblapack3gf_3.4.1-6 liblcms1_1.19.dfsg-1.2 libldap-2.4-2_2.4.31-1 libldl2.0.1_1:3.4.0-3 libllvm3.2_3.2-2 liblocale-gettext-perl_1.05-7+b1 liblzma5_5.1.1alpha+20120614-2 libmagic1_5.11-2 libmng1_1.0.10-3 libmount1_2.20.1-5.3 libmpc2_0.9-4 libmpfr-dev_3.1.0-5 libmpfr4_3.1.0-5 libmumps-4.10.0_4.10.0.dfsg-3 libmumps-dev_4.10.0.dfsg-3 libncurses5_5.9-10 libncursesw5_5.9-10 libnettle4_2.4-3 libnuma1_2.0.8-1 libopenmpi-dev_1.4.5-1 libopenmpi1.3_1.4.5-1 libp11-kit0_0.12-3 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libparpack2_3.1.1-2.1 libparpack2-dev_3.1.1-2.1 libpcre3_1:8.31-2 libpetsc3.2_3.2.dfsg-6 libpetsc3.2-dev_3.2.dfsg-6 libpipeline1_1.2.2-1 libpng12-0_1.2.49-3 libpopt0_1.16-7 libprocps0_1:3.3.4-2 libpthread-stubs0_0.3-3 libpthread-stubs0-dev_0.3-3 libptscotch-5.1_5.1.12b.dfsg-2 libptscotch-dev_5.1.12b.dfsg-2 libpython2.6_2.6.8-1.1 libpython2.7_2.7.3-6 libqt4-dbus_4:4.8.2+dfsg-10 libqt4-declarative_4:4.8.2+dfsg-10 libqt4-designer_4:4.8.2+dfsg-10 libqt4-dev_4:4.8.2+dfsg-10 libqt4-dev-bin_4:4.8.2+dfsg-10 libqt4-help_4:4.8.2+dfsg-10 libqt4-network_4:4.8.2+dfsg-10 libqt4-opengl_4:4.8.2+dfsg-10 libqt4-qt3support_4:4.8.2+dfsg-10 libqt4-script_4:4.8.2+dfsg-10 libqt4-scripttools_4:4.8.2+dfsg-10 libqt4-sql_4:4.8.2+dfsg-10 libqt4-svg_4:4.8.2+dfsg-10 libqt4-test_4:4.8.2+dfsg-10 libqt4-xml_4:4.8.2+dfsg-10 libqt4-xmlpatterns_4:4.8.2+dfsg-10 libqtcore4_4:4.8.2+dfsg-10 libqtdbus4_4:4.8.2+dfsg-10 libqtgui4_4:4.8.2+dfsg-10 libquadmath0_4.7.2-5 libreadline6_6.2+dfsg-0.1 librtmp0_2.4+20111222.git4e06e21-1 libsasl2-2_2.1.25.dfsg1-6 libscalapack-mpi-dev_1.8.0-9 libscalapack-mpi1_1.8.0-9 libscotch-5.1_5.1.12b.dfsg-2 libscotch-dev_5.1.12b.dfsg-2 libselinux1_2.1.9-5 libsemanage-common_2.1.6-6 libsemanage1_2.1.6-6 libsepol1_2.1.4-3 libslang2_2.2.4-15 libslepc3.2_3.2-p5-1 libslepc3.2-dev_3.2-p5-1 libsm6_2:1.2.1-2 libspooles-dev_2.2-9 libspooles2.2_2.2-9 libsqlite3-0_3.7.15.2-1 libss2_1.42.5-1 libssh2-1_1.4.2-1.1 libssl-dev_1.0.1c-4 libssl1.0.0_1.0.1c-4 libstdc++6_4.7.2-5 libstdc++6-4.6-dev_4.6.3-15 libstdc++6-4.7-dev_4.7.2-5 libsuitesparse-dev_1:3.4.0-3 libsuperlu3_3.0+20070106-3 libsuperlu3-dev_3.0+20070106-3 libswitch-perl_2.16-2 libtasn1-3_2.13-2 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtiff4_3.9.6-11 libtimedate-perl_1.2000-1 libtinfo5_5.9-10 libtorque2_2.4.16+dfsg-1 libumfpack5.4.0_1:3.4.0-3 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-23+nmu1 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.3 libx11-6_2:1.5.0-1 libx11-data_2:1.5.0-1 libx11-dev_2:1.5.0-1 libx11-xcb1_2:1.5.0-1 libxau-dev_1:1.0.7-1 libxau6_1:1.0.7-1 libxcb-glx0_1.8.1-2 libxcb1_1.8.1-2 libxcb1-dev_1.8.1-2 libxdamage1_1:1.1.3-2 libxdmcp-dev_1:1.1.1-1 libxdmcp6_1:1.1.1-1 libxext6_2:1.3.1-2 libxfixes3_1:5.0-4 libxml2_2.8.0+dfsg1-7 libxml2-dev_2.8.0+dfsg1-7 libxmlrpc-core-c3_1.16.33-3.2 libxrender1_1:0.9.7-1 libxt6_1:1.1.3-1 libxxf86vm1_1:1.1.2-1 linux-libc-dev_3.2.35-2 login_1:4.1.5.1-1 lsb-base_4.1+Debian9 make_3.81-8.2 man-db_2.6.3-3 mawk_1.3.3-17 mime-support_3.52-2 mount_2.20.1-5.3 mpi-default-bin_1.0.1 mpi-default-dev_1.0.1 multiarch-support_2.13-38 ncurses-base_5.9-10 ncurses-bin_5.9-10 openmpi-bin_1.4.5-1 openmpi-common_1.4.5-1 passwd_1:4.1.5.1-1 patch_2.6.1-3 perl_5.14.2-17 perl-base_5.14.2-17 perl-modules_5.14.2-17 pkg-config_0.26-1 po-debconf_1.0.16+nmu2 procps_1:3.3.4-2 python_2.7.3-3 python-all_2.7.3-3 python-all-dev_2.7.3-3 python-dev_2.7.3-3 python-minimal_2.7.3-3 python-numpy_1:1.6.2-1 python-support_1.0.15 python-ufc_2.0.5-3 python2.6_2.6.8-1.1 python2.6-dev_2.6.8-1.1 python2.6-minimal_2.6.8-1.1 python2.7_2.7.3-6 python2.7-dev_2.7.3-6 python2.7-minimal_2.7.3-6 qdbus_4:4.8.2+dfsg-10 qt4-linguist-tools_4:4.8.2+dfsg-10 qt4-qmake_4:4.8.2+dfsg-10 readline-common_6.2+dfsg-0.1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-dolfin-dummy_0.invalid.0 sed_4.2.1-10 sensible-utils_0.0.7 sudo_1.8.5p2-1 swig2.0_2.0.8-1 sysv-rc_2.88dsf-39 sysvinit_2.88dsf-39 sysvinit-utils_2.88dsf-39 tar_1.26+dfsg-0.1 ttf-dejavu-core_2.33-3 tzdata_2012j-1 ucf_3.0025+nmu3 ufc_2.0.5-3 util-linux_2.20.1-5.3 vim_2:7.3.547-6 vim-common_2:7.3.547-6 vim-runtime_2:7.3.547-6 x11-common_1:7.7+1 x11proto-core-dev_7.0.23-1 x11proto-input-dev_2.2-1 x11proto-kb-dev_1.0.6-2 xorg-sgml-doctools_1:1.10-1 xtrans-dev_1.2.7-1 xz-utils_5.1.1alpha+20120614-2 zlib1g_1:1.2.7.dfsg-13 zlib1g-dev_1:1.2.7.dfsg-13 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Fri Jun 29 08:06:51 2012 UTC using RSA key ID 9F807F14 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./dolfin_1.0.0-7.dsc dpkg-source: info: extracting dolfin in dolfin-1.0.0 dpkg-source: info: unpacking dolfin_1.0.0.orig.tar.gz dpkg-source: info: unpacking dolfin_1.0.0-7.debian.tar.gz dpkg-source: info: applying fix_swig_2.0.5_bug.patch dpkg-source: info: applying gcc4.7.patch Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── HOME=/sbuild-nonexistent LOGNAME=user PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=user SCHROOT_SESSION_ID=unstable-amd64-sbuild-5f444a29-8b9e-4767-b2eb-36a461cb83b4 SCHROOT_UID=1000 SCHROOT_USER=user SHELL=/bin/sh USER=user dpkg-buildpackage ───────────────── dpkg-buildpackage: source package dolfin dpkg-buildpackage: source version 1.0.0-7 dpkg-buildpackage: source changed by Johannes Ring dpkg-source --before-build dolfin-1.0.0 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean test -x debian/rules dh_testroot rmdir obj-x86_64-linux-gnu rmdir: failed to remove 'obj-x86_64-linux-gnu': No such file or directory make: [cleanbuilddir] Error 1 (ignored) rm -f debian/stamp-makefile-build debian/stamp-makefile-install /usr/bin/make -C obj-x86_64-linux-gnu -k clean make: *** obj-x86_64-linux-gnu: No such file or directory. Stop. make: [makefile-clean] Error 2 (ignored) rm -rf obj-x86_64-linux-gnu dh_clean rm -f debian/copyright_newhints rm -f debian/cdbs-install-list debian/cdbs-package-list debian/stamp-copyright-check rm -rf "debian/upstream-cruft" rm -f debian/stamp-upstream-cruft rm -rf install-stamp-python2.6 install-stamp-python2.7 debian/rules build-arch test -x debian/rules mkdir -p "obj-x86_64-linux-gnu" /usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_DH_STRIP_ARGS is a deprecated variable WARNING: copyright-check disabled - licensecheck (from devscripts package) is missing. touch debian/stamp-copyright-check touch debian/stamp-upstream-cruft cd obj-x86_64-linux-gnu && cmake /«PKGBUILDDIR»/. -DCMAKE_INSTALL_PREFIX="/usr" -DCMAKE_C_COMPILER:FILEPATH="cc" -DCMAKE_CXX_COMPILER:FILEPATH="g++" -DCMAKE_C_FLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -D_FORTIFY_SOURCE=2" -DCMAKE_CXX_FLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -D_FORTIFY_SOURCE=2" -DCMAKE_SKIP_RPATH=ON -DCMAKE_VERBOSE_MAKEFILE=ON -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFIN_ENABLE_TRILINOS:BOOL=OFF -D DOLFIN_ENABLE_CGAL:BOOL=ON -D DOLFIN_ENABLE_MTL4:BOOL=OFF -D DOLFIN_ENABLE_PARMETIS:BOOL=OFF -D DOLFIN_ENABLE_UNIT_TESTS:BOOL=OFF -D SWIG_EXECUTABLE:FILEPATH=/usr/bin/swig2.0 -D DOLFIN_ENABLE_MPI:BOOL=ON -D PETSC_DIR:PATH=/usr/lib/petscdir/3.2 -D SLEPC_DIR:PATH=/usr/lib/slepcdir/3.2 -D PYTHON_EXECUTABLE:FILEPATH=/usr/bin/python2.7 -D PYTHON_LIBRARY:FILEPATH=/usr/lib/libpython2.7.so -D PYTHON_INCLUDE_DIR:PATH=/usr/include/python2.7 .. -- The C compiler identification is Clang 3.2.0 -- The CXX compiler identification is Clang 3.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DISABLE_PEDANTIC_CHECKS -- Performing Test HAVE_DISABLE_PEDANTIC_CHECKS - Success -- Performing Test HAVE_STD -- Performing Test HAVE_STD - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found MPI_C: /usr/lib/openmpi/lib/libmpi.so;/usr/lib/openmpi/lib/libopen-rte.so;/usr/lib/openmpi/lib/libopen-pal.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- Found MPI_CXX: /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so;/usr/lib/openmpi/lib/libopen-rte.so;/usr/lib/openmpi/lib/libopen-pal.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [/openmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-Qopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-openmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [ ] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-xopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [+Oopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-qsmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-mp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [/openmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-Qopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-openmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [ ] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-xopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [+Oopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-qsmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-mp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Could NOT find OpenMP (missing: OpenMP_C_FLAGS OpenMP_CXX_FLAGS) -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [/openmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-Qopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-openmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [ ] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-xopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [+Oopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-qsmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP C flag = [-mp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [/openmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-Qopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-openmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [ ] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-xopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [+Oopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-qsmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Try OpenMP CXX flag = [-mp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Failed -- Could NOT find OpenMP (missing: OpenMP_C_FLAGS OpenMP_CXX_FLAGS) -- Performing Test OPENMP_UINT_TEST_RUNS -- Performing Test OPENMP_UINT_TEST_RUNS - Failed -- Boost version: 1.49.0 -- Found the following Boost libraries: -- filesystem -- program_options -- system -- thread -- iostreams -- math_tr1 -- mpi -- serialization -- UFC version: 2.0.5 -- Checking for package 'Armadillo' -- Performing Test ARMADILLO_TEST_RUNS -- Performing Test ARMADILLO_TEST_RUNS - Success -- Found Armadillo: /usr/lib/libarmadillo.so -- Found LibXml2: /usr/lib/x86_64-linux-gnu/libxml2.so (found version "2.8.0") -- Found PythonInterp: /usr/bin/python2.7 (found version "2.7.3") -- Found PythonLibs: /usr/lib/libpython2.7.so (found version "2.7.3") -- NumPy headers found -- Found SWIG: /usr/bin/swig2.0 (found version "2.0.8") -- Checking for package 'SCOTCH-PT' -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/libptscotch.so;/usr/lib/libptscotcherr.so -- Checking for package 'AMD' -- Found AMD: /usr/lib/libamd.so -- Checking for package 'BLAS' -- Found BLAS: /usr/lib/libblas.so -- Checking for package 'UMFPACK' -- Checking for package 'AMD' -- Checking for package 'BLAS' -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- Checking for package 'BLAS' -- ParMETIS could not be found/configured. (missing: PARMETIS_LIBRARIES PARMETIS_TEST_RUNS PARMETIS_INCLUDE_DIRS) -- Checking for package 'LAPACK' -- Found LAPACK: /usr/lib/liblapack.so -- Performing Test CHOLMOD_TEST_RUNS -- Performing Test CHOLMOD_TEST_RUNS - Success -- Found CHOLMOD: /usr/lib/libcholmod.so;/usr/lib/libamd.so;/usr/lib/libcamd.so;/usr/lib/libcolamd.so;/usr/lib/libccolamd.so;/usr/lib/libblas.so;/usr/lib/liblapack.so -- Performing Test UMFPACK_TEST_RUNS -- Performing Test UMFPACK_TEST_RUNS - Success -- Found UMFPACK: /usr/include/suitesparse -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- Checking for package 'BLAS' -- ParMETIS could not be found/configured. (missing: PARMETIS_LIBRARIES PARMETIS_TEST_RUNS PARMETIS_INCLUDE_DIRS) -- Checking for package 'LAPACK' -- Checking for package 'PETSc' -- PETSC_DIR is /usr/lib/petscdir/3.2 -- PETSC_ARCH is linux-gnu-c-opt -- Found petscconf.h -- Performing Test PETSC_TEST_RUNS -- Performing Test PETSC_TEST_RUNS - Success -- PETSc test runs -- Found PETSc: /usr/lib/petscdir/3.2/linux-gnu-c-opt/lib/libpetsc.so -- Checking for package 'SLEPc' -- SLEPC_DIR is /usr/lib/slepcdir/3.2 -- Performing Test SLEPC_TEST_RUNS -- Performing Test SLEPC_TEST_RUNS - Success -- SLEPc test runs -- Found SLEPc: /usr/lib/libslepc.so;/usr/lib/libparpack.so;/usr/lib/libarpack.so -- Checking for package 'CGAL' -- Performing Test CGAL_TEST_RUNS -- Performing Test CGAL_TEST_RUNS - Success -- Found CGAL: /usr/lib/libCGAL.so;/usr/lib/x86_64-linux-gnu/libgmpxx.so;/usr/lib/x86_64-linux-gnu/libmpfr.so;/usr/lib/x86_64-linux-gnu/libgmp.so;/usr/lib/libboost_thread-mt.so -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.7") -- Checking for package 'Sphinx' -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE SPHINX_VERSION_OK) (Required is at least version "1.0.7") -- -- The following optional packages were found: -- ------------------------------------------- -- (OK) MPI -- (OK) PETSC -- (OK) SLEPC -- (OK) UMFPACK -- (OK) CHOLMOD -- (OK) SCOTCH -- (OK) CGAL -- (OK) ZLIB -- (OK) PYTHON -- -- The following optional packages were not enabled: -- ------------------------------------------------- -- (--) TRILINOS -- (--) MTL4 -- (--) PARMETIS -- -- The following optional packages could not be found: -- --------------------------------------------------- -- (**) OPENMP -- (**) SPHINX -- CMake Warning at dolfin/CMakeLists.txt:227 (message): UFC compiled with different version of SWIG. Please install SWIG version 2.0.7 or recompile UFC with present SWIG. CMake Warning at CMakeLists.txt:584 (message): Disabling generation of documentation because Sphinx is missing. -- Configuring done -- Generating done -- Build files have been written to: /«PKGBUILDDIR»/obj-x86_64-linux-gnu /usr/bin/make -C obj-x86_64-linux-gnu make[1]: Entering directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu' /usr/bin/cmake -H/«PKGBUILDDIR» -B/«PKGBUILDDIR»/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles /«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu' /usr/bin/make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/depend make[3]: Entering directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu' cd /«PKGBUILDDIR»/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR»/dolfin /«PKGBUILDDIR»/obj-x86_64-linux-gnu /«PKGBUILDDIR»/obj-x86_64-linux-gnu/dolfin /«PKGBUILDDIR»/obj-x86_64-linux-gnu/dolfin/CMakeFiles/dolfin.dir/DependInfo.cmake --color= Scanning dependencies of target dolfin make[3]: Leaving directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu' /usr/bin/make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[3]: Entering directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o cd /«PKGBUILDDIR»/obj-x86_64-linux-gnu/dolfin && /usr/bin/g++ -Ddolfin_EXPORTS -DBOOST_UBLAS_NDEBUG -DHAS_SLEPC -DHAS_PETSC -DHAS_UMFPACK -DHAS_CHOLMOD -DHAS_SCOTCH -DHAS_CGAL -DHAS_ZLIB -DHAS_MPI -DMPICH_IGNORE_CXX_SEEK -DDOLFIN_VERSION=\"1.0.0\" -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -D_FORTIFY_SOURCE=2 -O2 -g -fPIC -I/«PKGBUILDDIR» -I/usr/include/libxml2 -I/usr/lib/slepcdir/3.2 -I/usr/lib/slepcdir/3.2/linux-gnu-c-opt/include -I/usr/lib/slepcdir/3.2/include -I/usr/lib/petscdir/3.2/include -I/usr/lib/petscdir/3.2/linux-gnu-c-opt/include -I/usr/include/scotch -I/usr/include/spooles -I/usr/include/suitesparse -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -o CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o -c /«PKGBUILDDIR»/dolfin/adaptivity/marking.cpp /usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles 22 [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o cd /«PKGBUILDDIR»/obj-x86_64-linux-gnu/dolfin && /usr/bin/g++ -Ddolfin_EXPORTS -DBOOST_UBLAS_NDEBUG -DHAS_SLEPC -DHAS_PETSC -DHAS_UMFPACK -DHAS_CHOLMOD -DHAS_SCOTCH -DHAS_CGAL -DHAS_ZLIB -DHAS_MPI -DMPICH_IGNORE_CXX_SEEK -DDOLFIN_VERSION=\"1.0.0\" -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -D_FORTIFY_SOURCE=2 -O2 -g -fPIC -I/«PKGBUILDDIR» -I/usr/include/libxml2 -I/usr/lib/slepcdir/3.2 -I/usr/lib/slepcdir/3.2/linux-gnu-c-opt/include -I/usr/lib/slepcdir/3.2/include -I/usr/lib/petscdir/3.2/include -I/usr/lib/petscdir/3.2/linux-gnu-c-opt/include -I/usr/include/scotch -I/usr/include/spooles -I/usr/include/suitesparse -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -o CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o -c /«PKGBUILDDIR»/dolfin/adaptivity/adaptivesolve.cpp In file included from /«PKGBUILDDIR»/dolfin/adaptivity/adaptivesolve.cpp:27: In file included from /«PKGBUILDDIR»/dolfin/adaptivity/AdaptiveLinearVariationalSolver.h:30: In file included from /«PKGBUILDDIR»/dolfin/adaptivity/GenericAdaptiveVariationalSolver.h:30: /«PKGBUILDDIR»/dolfin/adaptivity/ErrorControl.h:195:40: error: no function named 'adapt' with type 'const dolfin::ErrorControl &(const dolfin::ErrorControl &, boost::shared_ptr, bool)' was found in the specified scope friend const ErrorControl& dolfin::adapt(const ErrorControl& ec, ^ 1 error generated. make[3]: *** [dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o] Error 1 make[3]: Leaving directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu' make[2]: *** [dolfin/CMakeFiles/dolfin.dir/all] Error 2 make[2]: Leaving directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu' make[1]: *** [all] Error 2 make[1]: Leaving directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu' make: *** [debian/stamp-makefile-build] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 ──────────────────────────────────────────────────────────────────────────────── Build finished at 20130202-0211 Finished ──────── E: Build failure (dpkg-buildpackage died) ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /«BUILDDIR» Not cleaning session: cloned chroot in use ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Architecture: amd64 Build-Space: 48232 Build-Time: 53 Distribution: unstable Fail-Stage: build Install-Time: 44 Job: dolfin_1.0.0-7 Package: dolfin Package-Time: 126 Source-Version: 1.0.0-7 Space: 48232 Status: attempted Version: 1.0.0-7 ──────────────────────────────────────────────────────────────────────────────── Finished at 20130202-0211 Build needed 00:02:06, 48232k disc space DC-Status: Failed 126.683311s DC-Time-Estimation: 126.683311 versus expected 4843 (r/m: 37.2291871105263 ; m: 126.683311)