DC-Build-Header: cmtk 3.3.1-1.2 / 2017-08-20 18:38:52 +0000 DC-Task: type:rebuild-binarch-only source:cmtk version:3.3.1-1.2 chroot:unstable esttime:157 logfile:/tmp/cmtk_3.3.1-1.2_unstable_clang5.0.log modes:clang50:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang50 cmtk_3.3.1-1.2' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-36-254.eu-central-1.compute.internal +==============================================================================+ | cmtk 3.3.1-1.2 (amd64) Sun, 20 Aug 2017 18:38:52 +0000 | +==============================================================================+ Package: cmtk Version: 3.3.1-1.2 Source Version: 3.3.1-1.2 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-027aedcf-4c95-4f61-8320-b946e160c7fc' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang50 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=5.0 + echo 'Install of clang-5.0' Install of clang-5.0 + apt-get update Hit:1 http://127.0.0.1:9999/debian unstable InRelease Get:2 http://127.0.0.1:9999/debian unstable/main Translation-en [5785 kB] Fetched 5785 kB in 1s (3997 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-5.0 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libasan3 libbsd0 libclang-common-5.0-dev libclang1-5.0 libedit2 libgcc-6-dev libjsoncpp1 libllvm5.0 libncurses5 libobjc-6-dev libobjc4 libstdc++-6-dev Suggested packages: gnustep gnustep-devel clang-5.0-doc libomp-dev libstdc++-6-doc Recommended packages: llvm-5.0-dev python libgpm2 The following NEW packages will be installed: clang-5.0 libasan3 libbsd0 libclang-common-5.0-dev libclang1-5.0 libedit2 libgcc-6-dev libjsoncpp1 libllvm5.0 libncurses5 libobjc-6-dev libobjc4 libstdc++-6-dev 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. Need to get 88.4 MB of archives. After this operation, 376 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.6-1 [90.3 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5 amd64 6.0+20170715-2 [93.8 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20170329-1 [85.2 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libllvm5.0 amd64 1:5.0~+rc2-1 [13.5 MB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-5.0 amd64 1:5.0~+rc2-1 [6729 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libasan3 amd64 6.4.0-3 [311 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libgcc-6-dev amd64 6.4.0-3 [2296 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 libstdc++-6-dev amd64 6.4.0-3 [1421 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 7.2.0-1 [51.0 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-6-dev amd64 6.4.0-3 [197 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-5.0-dev amd64 1:5.0~+rc2-1 [1989 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 clang-5.0 amd64 1:5.0~+rc2-1 [61.6 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 88.4 MB in 0s (98.9 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9822 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.8.6-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.6-1) ... Selecting previously unselected package libncurses5:amd64. Preparing to unpack .../01-libncurses5_6.0+20170715-2_amd64.deb ... Unpacking libncurses5:amd64 (6.0+20170715-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../02-libedit2_3.1-20170329-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20170329-1) ... Selecting previously unselected package libllvm5.0:amd64. Preparing to unpack .../03-libllvm5.0_1%3a5.0~+rc2-1_amd64.deb ... Unpacking libllvm5.0:amd64 (1:5.0~+rc2-1) ... Selecting previously unselected package libclang1-5.0:amd64. Preparing to unpack .../04-libclang1-5.0_1%3a5.0~+rc2-1_amd64.deb ... Unpacking libclang1-5.0:amd64 (1:5.0~+rc2-1) ... Selecting previously unselected package libjsoncpp1:amd64. Preparing to unpack .../05-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package libasan3:amd64. Preparing to unpack .../06-libasan3_6.4.0-3_amd64.deb ... Unpacking libasan3:amd64 (6.4.0-3) ... Selecting previously unselected package libgcc-6-dev:amd64. Preparing to unpack .../07-libgcc-6-dev_6.4.0-3_amd64.deb ... Unpacking libgcc-6-dev:amd64 (6.4.0-3) ... Selecting previously unselected package libstdc++-6-dev:amd64. Preparing to unpack .../08-libstdc++-6-dev_6.4.0-3_amd64.deb ... Unpacking libstdc++-6-dev:amd64 (6.4.0-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../09-libobjc4_7.2.0-1_amd64.deb ... Unpacking libobjc4:amd64 (7.2.0-1) ... Selecting previously unselected package libobjc-6-dev:amd64. Preparing to unpack .../10-libobjc-6-dev_6.4.0-3_amd64.deb ... Unpacking libobjc-6-dev:amd64 (6.4.0-3) ... Selecting previously unselected package libclang-common-5.0-dev. Preparing to unpack .../11-libclang-common-5.0-dev_1%3a5.0~+rc2-1_amd64.deb ... Unpacking libclang-common-5.0-dev (1:5.0~+rc2-1) ... Selecting previously unselected package clang-5.0. Preparing to unpack .../12-clang-5.0_1%3a5.0~+rc2-1_amd64.deb ... Unpacking clang-5.0 (1:5.0~+rc2-1) ... Setting up libncurses5:amd64 (6.0+20170715-2) ... Setting up libobjc4:amd64 (7.2.0-1) ... Setting up libasan3:amd64 (6.4.0-3) ... Setting up libgcc-6-dev:amd64 (6.4.0-3) ... Setting up libstdc++-6-dev:amd64 (6.4.0-3) ... Setting up libbsd0:amd64 (0.8.6-1) ... Processing triggers for libc-bin (2.24-14) ... Setting up libobjc-6-dev:amd64 (6.4.0-3) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libllvm5.0:amd64 (1:5.0~+rc2-1) ... Setting up libclang1-5.0:amd64 (1:5.0~+rc2-1) ... Setting up libclang-common-5.0-dev (1:5.0~+rc2-1) ... Setting up clang-5.0 (1:5.0~+rc2-1) ... Processing triggers for libc-bin (2.24-14) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-5.0 g++-4.6 + ln -s clang-5.0 gcc-4.6 + ln -s clang-5.0 cpp-4.6 + ln -s clang-5.0 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-5.0 g++-4.7 + ln -s clang-5.0 gcc-4.7 + ln -s clang-5.0 cpp-4.7 + ln -s clang-5.0 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-5.0 g++-4.8 + ln -s clang-5.0 gcc-4.8 + ln -s clang-5.0 cpp-4.8 + ln -s clang-5.0 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-5.0 g++-4.9 + ln -s clang-5.0 gcc-4.9 + ln -s clang-5.0 cpp-4.9 + ln -s clang-5.0 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-5.0 g++-5 + ln -s clang-5.0 gcc-5 + ln -s clang-5.0 cpp-5 + ln -s clang-5.0 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-5.0 g++-6 + ln -s clang-5.0 gcc-6 + ln -s clang-5.0 cpp-6 + ln -s clang-5.0 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-5.0 g++-7 + ln -s clang-5.0 gcc-7 + ln -s clang-5.0 cpp-7 + ln -s clang-5.0 gcc + echo 'gcc-7 hold' + dpkg --set-selections + echo 'g++-7 hold' + dpkg --set-selections + cd - /build/cmtk-yJXUHY + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang50'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'cmtk' packaging is maintained in the 'Git' version control system at: git://git.debian.org/pkg-exppsy/cmtk.git Please use: git clone git://git.debian.org/pkg-exppsy/cmtk.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1568 kB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main cmtk 3.3.1-1.2 (dsc) [2236 B] Get:2 http://127.0.0.1:9999/debian unstable/main cmtk 3.3.1-1.2 (tar) [1556 kB] Get:3 http://127.0.0.1:9999/debian unstable/main cmtk 3.3.1-1.2 (diff) [9768 B] Fetched 1568 kB in 0s (7715 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/cmtk-yJXUHY/cmtk-3.3.1' with '<>' I: NOTICE: Log filtering will replace 'build/cmtk-yJXUHY' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-fwws0y/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-fwws0y/apt_archive ./ InRelease Get:2 copy:/<>/resolver-fwws0y/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-fwws0y/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-fwws0y/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-fwws0y/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 784 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-fwws0y/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [784 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 784 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 11331 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 7.0.50~), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev | libz-dev, libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libqt4-dev, qt4-qmake, libpng-dev, libtiff-dev | libtiff4-dev, libwrap0-dev, libcharls-dev | libdcmtk1-dev | libdcmtk2-dev (<< 3.6.0-8~), libxml2-dev, libssl-dev, xvfb, bc, dc, xauth Filtered Build-Depends: debhelper (>= 7.0.50~), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev, libdcmtk-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libqt4-dev, qt4-qmake, libpng-dev, libtiff-dev, libwrap0-dev, libcharls-dev, libxml2-dev, libssl-dev, xvfb, bc, dc, xauth dpkg-deb: building package 'sbuild-build-depends-cmtk-dummy' in '/<>/resolver-fwws0y/apt_archive/sbuild-build-depends-cmtk-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-cmtk-dummy sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-fwws0y/apt_archive ./ InRelease Get:2 copy:/<>/resolver-fwws0y/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-fwws0y/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-fwws0y/apt_archive ./ Sources [623 B] Get:5 copy:/<>/resolver-fwws0y/apt_archive ./ Packages [668 B] Fetched 2254 B in 0s (0 B/s) Reading package lists... Reading package lists... Install cmtk build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bc bsdmainutils cmake cmake-data dc debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libaudio2 libbz2-dev libcharls-dev libcharls1 libcroco3 libcurl3 libdbus-1-3 libdcmtk-dev libdcmtk11 libdrm-common libdrm2 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgssapi-krb5-2 libice6 libicu-dev libicu57 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 libldap-2.4-2 libldap-common liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libmng1 libmxml-dev libmxml1 libnghttp2-14 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libprocps6 libpsl5 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtdbus4 libqtgui4 libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsqlite3-0 libsqlite3-dev libssh2-1 libssl-dev libssl1.0.2 libssl1.1 libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libuv1 libwrap0 libwrap0-dev libx11-6 libx11-data libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxfont2 libxkbfile1 libxml2 libxml2-dev libxmu6 libxmuu1 libxpm4 libxrender1 libxshmfence1 libxt6 libxxf86vm1 lsb-base m4 man-db po-debconf procps qdbus qt4-linguist-tools qt4-qmake qtchooser qtcore4-l10n readline-common ucf x11-common x11-xkb-utils xauth xkb-data xserver-common xvfb zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip nas dcmtk-doc libfftw3-doc krb5-doc krb5-user icu-doc liblcms2-utils liblzma-doc libqt4-declarative-folderlistmodel libqt4-declarative-gestures libqt4-declarative-particles libqt4-declarative-shaders qt4-qmlviewer firebird-dev libmysqlclient-dev libpq-dev libsqlite0-dev qt4-dev-tools qt4-doc unixodbc-dev libthai0 qt4-qtconfig sqlite3-doc libtool-doc gfortran | fortran95-compiler gcj-jdk pkg-config m4-doc less www-browser libmail-box-perl readline-doc Recommended packages: curl | wget | lynx-cur bzip2-doc ca-certificates dbus libarchive-cpio-perl libgl1-mesa-dri libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libmxml-bin libpng-tools publicsuffix libqt4-opengl-dev libqt4-sql-mysql | libqt4-sql-odbc | libqt4-sql-psql | libqt4-sql-sqlite | libqt4-sql-sqlite2 | libqt4-sql-ibase libcups2 qt-at-spi libsasl2-modules libssl-doc libltdl-dev tcpd xml-core libmail-sendmail-perl psmisc xfonts-base The following NEW packages will be installed: autoconf automake autopoint autotools-dev bc bsdmainutils cmake cmake-data dc debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libaudio2 libbz2-dev libcharls-dev libcharls1 libcroco3 libcurl3 libdbus-1-3 libdcmtk-dev libdcmtk11 libdrm-common libdrm2 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgssapi-krb5-2 libice6 libicu-dev libicu57 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 libldap-2.4-2 libldap-common liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libmng1 libmxml-dev libmxml1 libnghttp2-14 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libprocps6 libpsl5 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtdbus4 libqtgui4 libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsqlite3-0 libsqlite3-dev libssh2-1 libssl-dev libssl1.0.2 libssl1.1 libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libuv1 libwrap0 libwrap0-dev libx11-6 libx11-data libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxfont2 libxkbfile1 libxml2 libxml2-dev libxmu6 libxmuu1 libxpm4 libxrender1 libxshmfence1 libxt6 libxxf86vm1 lsb-base m4 man-db po-debconf procps qdbus qt4-linguist-tools qt4-qmake qtchooser qtcore4-l10n readline-common sbuild-build-depends-cmtk-dummy ucf x11-common x11-xkb-utils xauth xkb-data xserver-common xvfb zlib1g-dev 0 upgraded, 164 newly installed, 0 to remove and 0 not upgraded. Need to get 96.8 MB of archives. After this operation, 391 MB of additional disk space will be used. Get:1 copy:/<>/resolver-fwws0y/apt_archive ./ sbuild-build-depends-cmtk-dummy 0.invalid.0 [886 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-9 [1160 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 9.0.12+nmu1 [186 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.4.2-1 [28.3 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.7.6.1-2 [1044 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 cmake-data all 3.9.1-1 [1294 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libprocps6 amd64 2:3.3.12-3 [58.1 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 lsb-base all 9.20161125 [27.9 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 procps amd64 2:3.3.12-3 [249 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 liblzo2-2 amd64 2.08-1.2+b2 [55.0 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-6 [7701 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-3 [715 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 libarchive13 amd64 3.2.2-2 [294 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 libkeyutils1 amd64 1.5.9-9 [12.4 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5support0 amd64 1.15.1-2 [62.2 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 libk5crypto3 amd64 1.15.1-2 [120 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5-3 amd64 1.15.1-2 [312 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.15.1-2 [155 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27~101-g0780600+dfsg-3 [68.2 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 libsasl2-2 amd64 2.1.27~101-g0780600+dfsg-3 [105 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 libldap-common all 2.4.45+dfsg-1 [87.0 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.45+dfsg-1 [223 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 libnghttp2-14 amd64 1.24.0-1 [81.6 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 libpsl5 amd64 0.18.0-2 [43.4 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-1+b1 [60.4 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 libssh2-1 amd64 1.8.0-1 [138 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.0.2 amd64 1.0.2l-2 [1294 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 libcurl3 amd64 7.55.0-1 [296 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.3-1 [87.5 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 librhash0 amd64 1.3.4-3 [85.7 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 libuv1 amd64 1.9.1-3 [84.4 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 cmake amd64 3.9.1-1 [3122 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 libpng16-16 amd64 1.6.31-1 [284 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 libfreetype6 amd64 2.8-0.2 [449 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 ucf all 3.0036 [70.2 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig-config all 2.12.3-0.2 [304 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 libfontconfig1 amd64 2.12.3-0.2 [366 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig amd64 2.12.3-0.2 [436 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 7.0-3 [70.4 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 libreadline7 amd64 7.0-3 [151 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.1 amd64 1.1.0f-4 [1349 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.31-1 [223 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.31-1 [112 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.31-1 [64.2 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-2+b1 [122 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.19.3-3 [582 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 libwrap0 amd64 7.6.q-26 [58.2 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.11-1 [29.9 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-10 [338 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20161112.1 [73.4 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-2 [736 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-2 [433 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 bc amd64 1.06.95-9+b3 [105 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 dc amd64 1.06.95-9+b3 [68.2 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2 [545 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 14 [15.9 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.59-1 [95.5 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.038-1 [17.6 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.038-1 [11.1 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.53.4-3 [2796 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-1 [144 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-2+b1 [1301 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 10.7.2 [975 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 icu-devtools amd64 57.1-6 [178 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 x11-common all 1:7.7+19 [251 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 libsm6 amd64 2:1.2.2-1+b3 [33.3 kB] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 libxcb1 amd64 1.12-1 [133 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 libx11-data all 2:1.6.4-3 [290 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 libx11-6 amd64 2:1.6.4-3 [747 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 libxt6 amd64 1:1.1.5-1 [188 kB] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 libaudio2 amd64 1.9.4-6 [80.0 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 libbz2-dev amd64 1.0.6-8.1 [29.4 kB] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 libcharls1 amd64 1.1.0+dfsg-2 [56.0 kB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 libcharls-dev amd64 1.1.0+dfsg-2 [21.6 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 libdbus-1-3 amd64 1.11.16+really1.10.22-1 [195 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 libicu-dev amd64 57.1-6 [16.5 MB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 libxml2-dev amd64 2.9.4+dfsg1-3 [812 kB] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libssl-dev amd64 1.1.0f-4 [1580 kB] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 zlib1g-dev amd64 1:1.2.8.dfsg-5 [205 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libpng-dev amd64 1.6.31-1 [252 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 libwrap0-dev amd64 7.6.q-26 [21.4 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 libjbig-dev amd64 2.1-3.1+b2 [30.5 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.1-2 [134 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:1.5.1-2 [210 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg-dev all 1:1.5.1-2 [56.1 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 liblzma-dev amd64 5.2.2-1.3 [292 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5 amd64 4.0.8-4 [237 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 libtiffxx5 amd64 4.0.8-4 [95.4 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5-dev amd64 4.0.8-4 [360 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 libdcmtk11 amd64 3.6.1~20170228-2 [4623 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 libdcmtk-dev amd64 3.6.1~20170228-2 [910 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-common all 2.4.82-1 [13.0 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 libdrm2 amd64 2.4.82-1 [38.8 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-double3 amd64 3.3.6p2-1 [732 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-long3 amd64 3.3.6p2-1 [315 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.6p2-1 [556 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-single3 amd64 3.3.6p2-1 [764 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-bin amd64 3.3.6p2-1 [50.1 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-dev amd64 3.3.6p2-1 [2123 kB] Get:109 http://127.0.0.1:9999/debian unstable/main amd64 libfontenc1 amd64 1:1.1.3-1+b2 [24.4 kB] Get:110 http://127.0.0.1:9999/debian unstable/main amd64 libglapi-mesa amd64 17.1.5-1 [59.8 kB] Get:111 http://127.0.0.1:9999/debian unstable/main amd64 libx11-xcb1 amd64 2:1.6.4-3 [183 kB] Get:112 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-dri2-0 amd64 1.12-1 [97.2 kB] Get:113 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-dri3-0 amd64 1.12-1 [95.6 kB] Get:114 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-glx0 amd64 1.12-1 [113 kB] Get:115 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-present0 amd64 1.12-1 [95.8 kB] Get:116 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-sync1 amd64 1.12-1 [99.2 kB] Get:117 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-xfixes0 amd64 1.12-1 [99.6 kB] Get:118 http://127.0.0.1:9999/debian unstable/main amd64 libxfixes3 amd64 1:5.0.3-1 [21.9 kB] Get:119 http://127.0.0.1:9999/debian unstable/main amd64 libxdamage1 amd64 1:1.1.4-2+b3 [14.5 kB] Get:120 http://127.0.0.1:9999/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:121 http://127.0.0.1:9999/debian unstable/main amd64 libxshmfence1 amd64 1.2-1+b2 [7922 B] Get:122 http://127.0.0.1:9999/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:123 http://127.0.0.1:9999/debian unstable/main amd64 libgl1-mesa-glx amd64 17.1.5-1 [168 kB] Get:124 http://127.0.0.1:9999/debian unstable/main amd64 liblcms2-2 amd64 2.8-4 [143 kB] Get:125 http://127.0.0.1:9999/debian unstable/main amd64 libmng1 amd64 1.0.10+dfsg-3.1+b5 [211 kB] Get:126 http://127.0.0.1:9999/debian unstable/main amd64 libmxml1 amd64 2.10-1+b1 [28.5 kB] Get:127 http://127.0.0.1:9999/debian unstable/main amd64 libmxml-dev amd64 2.10-1+b1 [41.9 kB] Get:128 http://127.0.0.1:9999/debian unstable/main amd64 libpixman-1-0 amd64 0.34.0-1 [530 kB] Get:129 http://127.0.0.1:9999/debian unstable/main amd64 qtcore4-l10n all 4:4.8.7+dfsg-11 [662 kB] Get:130 http://127.0.0.1:9999/debian unstable/main amd64 libqtcore4 amd64 4:4.8.7+dfsg-11 [1598 kB] Get:131 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-xml amd64 4:4.8.7+dfsg-11 [143 kB] Get:132 http://127.0.0.1:9999/debian unstable/main amd64 libqtdbus4 amd64 4:4.8.7+dfsg-11 [232 kB] Get:133 http://127.0.0.1:9999/debian unstable/main amd64 qtchooser amd64 63-g13a3d08-1 [25.2 kB] Get:134 http://127.0.0.1:9999/debian unstable/main amd64 qdbus amd64 4:4.8.7+dfsg-11 [76.8 kB] Get:135 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-dbus amd64 4:4.8.7+dfsg-11 [52.7 kB] Get:136 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-network amd64 4:4.8.7+dfsg-11 [606 kB] Get:137 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-script amd64 4:4.8.7+dfsg-11 [861 kB] Get:138 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-sql amd64 4:4.8.7+dfsg-11 [145 kB] Get:139 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-xmlpatterns amd64 4:4.8.7+dfsg-11 [1138 kB] Get:140 http://127.0.0.1:9999/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:141 http://127.0.0.1:9999/debian unstable/main amd64 libqtgui4 amd64 4:4.8.7+dfsg-11 [4150 kB] Get:142 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-declarative amd64 4:4.8.7+dfsg-11 [1131 kB] Get:143 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-designer amd64 4:4.8.7+dfsg-11 [3679 kB] Get:144 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-qt3support amd64 4:4.8.7+dfsg-11 [1092 kB] Get:145 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-dev-bin amd64 4:4.8.7+dfsg-11 [1735 kB] Get:146 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-help amd64 4:4.8.7+dfsg-11 [252 kB] Get:147 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-scripttools amd64 4:4.8.7+dfsg-11 [270 kB] Get:148 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-svg amd64 4:4.8.7+dfsg-11 [185 kB] Get:149 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-test amd64 4:4.8.7+dfsg-11 [107 kB] Get:150 http://127.0.0.1:9999/debian unstable/main amd64 qt4-linguist-tools amd64 4:4.8.7+dfsg-11 [919 kB] Get:151 http://127.0.0.1:9999/debian unstable/main amd64 qt4-qmake amd64 4:4.8.7+dfsg-11 [1296 kB] Get:152 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-dev amd64 4:4.8.7+dfsg-11 [894 kB] Get:153 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-dev amd64 3.19.3-3 [715 kB] Get:154 http://127.0.0.1:9999/debian unstable/main amd64 libxmu6 amd64 2:1.1.2-2 [60.3 kB] Get:155 http://127.0.0.1:9999/debian unstable/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:156 http://127.0.0.1:9999/debian unstable/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get:157 http://127.0.0.1:9999/debian unstable/main amd64 libxfont2 amd64 1:2.0.1-3 [132 kB] Get:158 http://127.0.0.1:9999/debian unstable/main amd64 libxkbfile1 amd64 1:1.0.9-2 [74.6 kB] Get:159 http://127.0.0.1:9999/debian unstable/main amd64 libxmuu1 amd64 2:1.1.2-2 [23.5 kB] Get:160 http://127.0.0.1:9999/debian unstable/main amd64 x11-xkb-utils amd64 7.7+3+b1 [163 kB] Get:161 http://127.0.0.1:9999/debian unstable/main amd64 xauth amd64 1:1.0.9-1+b2 [39.6 kB] Get:162 http://127.0.0.1:9999/debian unstable/main amd64 xkb-data all 2.19-1.1 [649 kB] Get:163 http://127.0.0.1:9999/debian unstable/main amd64 xserver-common all 2:1.19.3-2 [2061 kB] Get:164 http://127.0.0.1:9999/debian unstable/main amd64 xvfb amd64 2:1.19.3-2 [2815 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 96.8 MB in 1s (68.5 MB/s) Selecting previously unselected package groff-base. 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Setting up libfontenc1:amd64 (1:1.1.3-1+b2) ... Setting up libtiffxx5:amd64 (4.0.8-4) ... Setting up libfftw3-single3:amd64 (3.3.6p2-1) ... Setting up icu-devtools (57.1-6) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.5.1-2) ... Setting up liblzma-dev:amd64 (5.2.2-1.3) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libkeyutils1:amd64 (1.5.9-9) ... Setting up bsdmainutils (9.0.12+nmu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up bc (1.06.95-9+b3) ... Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libqt4-test:amd64 (4:4.8.7+dfsg-11) ... Setting up libfftw3-long3:amd64 (3.3.6p2-1) ... Setting up libx11-data (2:1.6.4-3) ... Setting up libqt4-xml:amd64 (4:4.8.7+dfsg-11) ... Setting up qt4-linguist-tools (4:4.8.7+dfsg-11) ... Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up autopoint (0.19.8.1-2) ... Setting up libdbus-1-3:amd64 (1.11.16+really1.10.22-1) ... Setting up liblzo2-2:amd64 (2.08-1.2+b2) ... Setting up libwrap0:amd64 (7.6.q-26) ... Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-5) ... Setting up libfile-stripnondeterminism-perl (0.038-1) ... Setting up libfftw3-bin (3.3.6p2-1) ... Setting up fontconfig-config (2.12.3-0.2) ... Setting up libmng1:amd64 (1.0.10+dfsg-3.1+b5) ... Setting up libwrap0-dev:amd64 (7.6.q-26) ... Setting up gettext (0.19.8.1-2+b1) ... Setting up libsqlite3-dev:amd64 (3.19.3-3) ... Setting up libarchive13:amd64 (3.2.2-2) ... Setting up libssl-dev:amd64 (1.1.0f-4) ... Setting up qt4-qmake (4:4.8.7+dfsg-11) ... Setting up libtiff5-dev:amd64 (4.0.8-4) ... Setting up libxfont2:amd64 (1:2.0.1-3) ... Setting up autoconf (2.69-10) ... Setting up libqt4-sql:amd64 (4:4.8.7+dfsg-11) ... Setting up libdcmtk11 (3.6.1~20170228-2) ... Setting up libicu-dev (57.1-6) ... Setting up file (1:5.31-1) ... Setting up libkrb5support0:amd64 (1.15.1-2) ... Setting up libdrm2:amd64 (2.4.82-1) ... Setting up libxml2-dev:amd64 (2.9.4+dfsg1-3) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libjpeg-dev (1:1.5.1-2) ... Setting up libfftw3-dev:amd64 (3.3.6p2-1) ... Setting up automake (1:1.15.1-2) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libice6:amd64 (2:1.0.9-2) ... Setting up man-db (2.7.6.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpng-dev:amd64 (1.6.31-1) ... Setting up libdcmtk-dev (3.6.1~20170228-2) ... Setting up libqtdbus4:amd64 (4:4.8.7+dfsg-11) ... Setting up libxcb1:amd64 (1.12-1) ... Setting up libtool (2.4.6-2) ... Setting up libxcb-present0:amd64 (1.12-1) ... 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Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libxfixes3:amd64 (1:5.0.3-1) ... Setting up libqt4-xmlpatterns:amd64 (4:4.8.7+dfsg-11) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up libgssapi-krb5-2:amd64 (1.15.1-2) ... Setting up xauth (1:1.0.9-1+b2) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libxaw7:amd64 (2:1.0.13-1+b2) ... Setting up libqtgui4:amd64 (4:4.8.7+dfsg-11) ... Setting up libxdamage1:amd64 (1:1.1.4-2+b3) ... Setting up x11-xkb-utils (7.7+3+b1) ... Setting up libqt4-designer:amd64 (4:4.8.7+dfsg-11) ... Setting up libcurl3:amd64 (7.55.0-1) ... Setting up libqt4-help:amd64 (4:4.8.7+dfsg-11) ... Setting up libgl1-mesa-glx:amd64 (17.1.5-1) ... Setting up cmake (3.9.1-1) ... Setting up libqt4-svg:amd64 (4:4.8.7+dfsg-11) ... Setting up libqt4-scripttools:amd64 (4:4.8.7+dfsg-11) ... Setting up libqt4-declarative:amd64 (4:4.8.7+dfsg-11) ... Setting up xserver-common (2:1.19.3-2) ... Setting up libqt4-qt3support:amd64 (4:4.8.7+dfsg-11) ... Setting up xvfb (2:1.19.3-2) ... Setting up libqt4-dev-bin (4:4.8.7+dfsg-11) ... Setting up libqt4-dev (4:4.8.7+dfsg-11) ... Setting up dh-strip-nondeterminism (0.038-1) ... Setting up debhelper (10.7.2) ... Setting up dh-autoreconf (14) ... Setting up sbuild-build-depends-cmtk-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.24-14) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-2-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.29-4 dpkg-dev_1.18.24 g++-7_7.2.0-1 gcc-7_7.2.0-1 libc6-dev_2.24-14 libstdc++-6-dev_6.4.0-3 libstdc++-7-dev_7.2.0-1 libstdc++6_7.2.0-1 linux-libc-dev_4.12.6-1 Package versions: adduser_3.116 apt_1.5~beta2 autoconf_2.69-10 automake_1:1.15.1-2 autopoint_0.19.8.1-2 autotools-dev_20161112.1 base-files_10 base-passwd_3.5.43 bash_4.4-5 bc_1.06.95-9+b3 binutils_2.29-4 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-4 build-essential_12.3 bzip2_1.0.6-8.1 clang-5.0_1:5.0~+rc2-1 cmake_3.9.1-1 cmake-data_3.9.1-1 coreutils_8.26-3 cpp_4:7.1.0-2 cpp-7_7.2.0-1 dash_0.5.8-2.5 dc_1.06.95-9+b3 debconf_1.5.63 debfoster_2.7-2.1+b1 debhelper_10.7.2 debian-archive-keyring_2017.5 debianutils_4.8.2 dh-autoreconf_14 dh-strip-nondeterminism_0.038-1 diffutils_1:3.6-1 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.5-1 e2fsprogs_1.43.5-1 eatmydata_105-5 fakeroot_1.22-1 fdisk_2.29.2-4 file_1:5.31-1 findutils_4.6.0+git+20170729-2 fontconfig_2.12.3-0.2 fontconfig-config_2.12.3-0.2 fonts-dejavu-core_2.37-1 g++_4:7.1.0-2 g++-7_7.2.0-1 gcc_4:7.1.0-2 gcc-6-base_6.4.0-3 gcc-7_7.2.0-1 gcc-7-base_7.2.0-1 gettext_0.19.8.1-2+b1 gettext-base_0.19.8.1-2+b1 gpgv_2.1.23-2 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5+b1 hostname_3.18+b1 icu-devtools_57.1-6 init-system-helpers_1.49 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3+b1 libapt-pkg5.0_1.5~beta2 libarchive-zip-perl_1.59-1 libarchive13_3.2.2-2 libasan3_6.4.0-3 libasan4_7.2.0-1 libatomic1_7.2.0-1 libattr1_1:2.4.47-2+b2 libaudio2_1.9.4-6 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1+b2 libblkid1_2.29.2-4 libbsd0_0.8.6-1 libbz2-1.0_1.0.6-8.1 libbz2-dev_1.0.6-8.1 libc-bin_2.24-14 libc-dev-bin_2.24-14 libc6_2.24-14 libc6-dev_2.24-14 libcap-ng0_0.7.7-3+b1 libcc1-0_7.2.0-1 libcharls-dev_1.1.0+dfsg-2 libcharls1_1.1.0+dfsg-2 libcilkrts5_7.2.0-1 libclang-common-5.0-dev_1:5.0~+rc2-1 libclang1-5.0_1:5.0~+rc2-1 libcomerr2_1.43.5-1 libcroco3_0.6.12-1 libcurl3_7.55.0-1 libdb5.3_5.3.28-13 libdbus-1-3_1.11.16+really1.10.22-1 libdcmtk-dev_3.6.1~20170228-2 libdcmtk11_3.6.1~20170228-2 libdebconfclient0_0.229 libdpkg-perl_1.18.24 libdrm-common_2.4.82-1 libdrm2_2.4.82-1 libeatmydata1_105-5 libedit2_3.1-20170329-1 libexpat1_2.2.3-1 libfakeroot_1.22-1 libfdisk1_2.29.2-4 libffi6_3.2.1-6 libfftw3-bin_3.3.6p2-1 libfftw3-dev_3.3.6p2-1 libfftw3-double3_3.3.6p2-1 libfftw3-long3_3.3.6p2-1 libfftw3-quad3_3.3.6p2-1 libfftw3-single3_3.3.6p2-1 libfile-stripnondeterminism-perl_0.038-1 libfontconfig1_2.12.3-0.2 libfontenc1_1:1.1.3-1+b2 libfreetype6_2.8-0.2 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.4.0-3 libgcc-7-dev_7.2.0-1 libgcc1_1:7.2.0-1 libgcrypt20_1.7.8-2 libgdbm3_1.8.3-14 libgl1-mesa-glx_17.1.5-1 libglapi-mesa_17.1.5-1 libglib2.0-0_2.53.4-3 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.14-3 libgomp1_7.2.0-1 libgpg-error0_1.27-3 libgssapi-krb5-2_1.15.1-2 libhogweed4_3.3-1+b1 libice6_2:1.0.9-2 libicu-dev_57.1-6 libicu57_57.1-6 libidn2-0_2.0.2-3 libisl15_0.18-1 libitm1_7.2.0-1 libjbig-dev_2.1-3.1+b2 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.1-2 libjpeg62-turbo_1:1.5.1-2 libjpeg62-turbo-dev_1:1.5.1-2 libjsoncpp1_1.7.4-3 libk5crypto3_1.15.1-2 libkeyutils1_1.5.9-9 libkrb5-3_1.15.1-2 libkrb5support0_1.15.1-2 liblcms2-2_2.8-4 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 libllvm5.0_1:5.0~+rc2-1 liblsan0_7.2.0-1 liblz4-1_0.0~r131-2+b1 liblzma-dev_5.2.2-1.3 liblzma5_5.2.2-1.3 liblzo2-2_2.08-1.2+b2 libmagic-mgc_1:5.31-1 libmagic1_1:5.31-1 libmng1_1.0.10+dfsg-3.1+b5 libmount1_2.29.2-4 libmpc3_1.0.3-1+b2 libmpfr4_3.1.5-1 libmpx2_7.2.0-1 libmxml-dev_2.10-1+b1 libmxml1_2.10-1+b1 libncurses5_6.0+20170715-2 libncursesw5_6.0+20170715-2 libnettle6_3.3-1+b1 libnghttp2-14_1.24.0-1 libobjc-6-dev_6.4.0-3 libobjc4_7.2.0-1 libp11-kit0_0.23.7-3 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpcre3_2:8.39-4 libperl5.26_5.26.0-5 libpipeline1_1.4.2-1 libpixman-1-0_0.34.0-1 libpng-dev_1.6.31-1 libpng16-16_1.6.31-1 libprocps6_2:3.3.12-3 libpsl5_0.18.0-2 libqt4-dbus_4:4.8.7+dfsg-11 libqt4-declarative_4:4.8.7+dfsg-11 libqt4-designer_4:4.8.7+dfsg-11 libqt4-dev_4:4.8.7+dfsg-11 libqt4-dev-bin_4:4.8.7+dfsg-11 libqt4-help_4:4.8.7+dfsg-11 libqt4-network_4:4.8.7+dfsg-11 libqt4-qt3support_4:4.8.7+dfsg-11 libqt4-script_4:4.8.7+dfsg-11 libqt4-scripttools_4:4.8.7+dfsg-11 libqt4-sql_4:4.8.7+dfsg-11 libqt4-svg_4:4.8.7+dfsg-11 libqt4-test_4:4.8.7+dfsg-11 libqt4-xml_4:4.8.7+dfsg-11 libqt4-xmlpatterns_4:4.8.7+dfsg-11 libqtcore4_4:4.8.7+dfsg-11 libqtdbus4_4:4.8.7+dfsg-11 libqtgui4_4:4.8.7+dfsg-11 libquadmath0_7.2.0-1 libreadline7_7.0-3 librhash0_1.3.4-3 librtmp1_2.4+20151223.gitfa8646d.1-1+b1 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libselinux1_2.6-3+b2 libsemanage-common_2.6-2 libsemanage1_2.6-2+b1 libsepol1_2.6-2 libsigsegv2_2.11-1 libsm6_2:1.2.2-1+b3 libsmartcols1_2.29.2-4 libsqlite3-0_3.19.3-3 libsqlite3-dev_3.19.3-3 libss2_1.43.5-1 libssh2-1_1.8.0-1 libssl-dev_1.1.0f-4 libssl1.0.2_1.0.2l-2 libssl1.1_1.1.0f-4 libstdc++-6-dev_6.4.0-3 libstdc++-7-dev_7.2.0-1 libstdc++6_7.2.0-1 libsystemd0_234-2 libtasn1-6_4.12-2.1 libtiff5_4.0.8-4 libtiff5-dev_4.0.8-4 libtiffxx5_4.0.8-4 libtimedate-perl_2.3000-2 libtinfo5_6.0+20170715-2 libtool_2.4.6-2 libtsan0_7.2.0-1 libubsan0_7.2.0-1 libudev1_234-2 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-4 libuv1_1.9.1-3 libwrap0_7.6.q-26 libwrap0-dev_7.6.q-26 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libx11-xcb1_2:1.6.4-3 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-dri2-0_1.12-1 libxcb-dri3-0_1.12-1 libxcb-glx0_1.12-1 libxcb-present0_1.12-1 libxcb-sync1_1.12-1 libxcb-xfixes0_1.12-1 libxcb1_1.12-1 libxdamage1_1:1.1.4-2+b3 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxfont2_1:2.0.1-3 libxkbfile1_1:1.0.9-2 libxml2_2.9.4+dfsg1-3 libxml2-dev_2.9.4+dfsg1-3 libxmu6_2:1.1.2-2 libxmuu1_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxshmfence1_1.2-1+b2 libxt6_1:1.1.5-1 libxxf86vm1_1:1.1.4-1+b2 linux-libc-dev_4.12.6-1 login_1:4.4-4.1 lsb-base_9.20161125 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17+b3 mount_2.29.2-4 multiarch-support_2.24-14 ncurses-base_6.0+20170715-2 ncurses-bin_6.0+20170715-2 passwd_1:4.4-4.1 patch_2.7.5-1+b2 perl_5.26.0-5 perl-base_5.26.0-5 perl-modules-5.26_5.26.0-5 po-debconf_1.0.20 procps_2:3.3.12-3 qdbus_4:4.8.7+dfsg-11 qt4-linguist-tools_4:4.8.7+dfsg-11 qt4-qmake_4:4.8.7+dfsg-11 qtchooser_63-g13a3d08-1 qtcore4-l10n_4:4.8.7+dfsg-11 readline-common_7.0-3 sbuild-build-depends-cmtk-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 sysvinit-utils_2.88dsf-59.9 tar_1.29b-2 ucf_3.0036 util-linux_2.29.2-4 x11-common_1:7.7+19 x11-xkb-utils_7.7+3+b1 xauth_1:1.0.9-1+b2 xkb-data_2.19-1.1 xserver-common_2:1.19.3-2 xvfb_2:1.19.3-2 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5 zlib1g-dev_1:1.2.8.dfsg-5 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Jun 30 17:49:34 2017 UTC gpgv: using RSA key 3AFA757FAC6EA11D2FF45DF088D24287A2D898B1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./cmtk_3.3.1-1.2.dsc dpkg-source: info: extracting cmtk in /<> dpkg-source: info: unpacking cmtk_3.3.1.orig.tar.gz dpkg-source: info: unpacking cmtk_3.3.1-1.2.debian.tar.xz dpkg-source: info: applying up_assure_no_as_needed_for_checklibdep dpkg-source: info: applying reproducible_build dpkg-source: info: applying fix_cmake_version_comparison dpkg-source: info: applying dcmtk-3.6.1-compatibility Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-027aedcf-4c95-4f61-8320-b946e160c7fc SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package cmtk dpkg-buildpackage: info: source version 3.3.1-1.2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Adrian Bunk dpkg-source --before-build cmtk-3.3.1 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --parallel dh: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean dh_auto_clean: Compatibility levels before 9 are deprecated (level 7 in use) rm -rf debian/manpages make[1]: Leaving directory '/<>' dh_clean -O--parallel rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ dh_clean: Compatibility levels before 9 are deprecated (level 7 in use) rm -f debian/cmtk.debhelper.log rm -f -- debian/cmtk.substvars debian/files rm -fr -- debian/cmtk/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch --parallel dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_update_autotools_config -a -O--parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- \ -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ -DBUILD_APPS:BOOL=ON \ -DBUILD_DOCUMENTATION:BOOL=OFF \ -DBUILD_GUI:BOOL=ON \ -DBUILD_SHARED_LIBS:BOOL=ON \ -DBUILD_TESTING:BOOL=OFF \ -DCMTK_BUILD_DCMTK:BOOL=OFF \ -DCMTK_BUILD_MXML:BOOL=OFF \ -DCMTK_BUILD_NRRD:BOOL=ON \ -DCMTK_BUILD_SQLITE:BOOL=OFF \ -DCMTK_BUILD_ZLIB:BOOL=OFF \ -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \ -DCMTK_USE_DCMTK:BOOL=ON \ -DCMTK_USE_FFTW:BOOL=ON \ -DCMTK_USE_QT:BOOL=ON \ -DCMTK_USE_SMP:BOOL=ON \ -DCMTK_USE_SQLITE:BOOL=ON \ -DDART_TESTING_TIMEOUT:STRING=15000 \ -DMXML_INCLUDE_DIR:PATH=/usr/include \ -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \ -DCMAKE_SKIP_RPATH:BOOL=OFF \ -DCMTK_BUILD_WRAPPER:BOOL=ON \ dh_auto_configure: Compatibility levels before 9 are deprecated (level 7 in use) install -d obj-x86_64-linux-gnu cd obj-x86_64-linux-gnu cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=ON -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF -DCMTK_BUILD_ZLIB:BOOL=OFF -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=ON -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF -DCMTK_BUILD_WRAPPER:BOOL=ON -- The C compiler identification is Clang 5.0.0 -- The CXX compiler identification is Clang 5.0.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of void* -- Check size of void* - done -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Looking for limits.h -- Looking for limits.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for include files sys/types.h, sys/prctl.h -- Looking for include files sys/types.h, sys/prctl.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Check for STD namespace -- Check for STD namespace - found -- Check for ANSI scope -- Check for ANSI scope - found -- Check for sstream -- Check for sstream - found -- System is Linux-4.9.0-2-amd64 -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file execinfo.h -- Looking for include file execinfo.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for include file termios.h -- Looking for include file termios.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file sys/ioctl.h -- Looking for include file sys/ioctl.h - found -- Looking for include file sys/procfs.h -- Looking for include file sys/procfs.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file sys/times.h -- Looking for include file sys/times.h - found -- Looking for include file sys/utsname.h -- Looking for include file sys/utsname.h - found -- Check size of ((struct stat*)0)->st_mode -- Check size of ((struct stat*)0)->st_mode - done -- Check size of struct stat64 -- Check size of struct stat64 - failed -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Check the value of the 22nd bit of a 32-bit quiet-NaN -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 -- Looking for C++ include unordered_map -- Looking for C++ include unordered_map - not found -- Looking for C++ include hash_map -- Looking for C++ include hash_map - found -- Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES) (found version "1.0") -- Could NOT find OpenMP_CXX (missing: OpenMP_CXX_FLAGS OpenMP_CXX_LIB_NAMES) (found version "1.0") -- Looking for include file dispatch/dispatch.h -- Looking for include file dispatch/dispatch.h - not found -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.8") -- Using system zlib -- Building bundled mxml due to outdated or broken system mxml (minimum version required is 2.7, version 2.8 is broken; installed version is 0.0) -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.6") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found system libbz2 -- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS) -- Found DCMTK: /usr/include/dcmtk/config -- - tested library png -- - tested library tiff -- - tested library CharLS -- Using system DCMTK library. -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) -- Found SQLite3: /usr/lib/x86_64-linux-gnu/libsqlite3.so -- Using system sqlite3 library -- Check size of long long -- Check size of long long - done -- Looking for strdup -- Looking for strdup - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for vsnprintf -- Looking for vsnprintf - found -- Looking for Q_WS_X11 -- Looking for Q_WS_X11 - found -- Looking for Q_WS_WIN -- Looking for Q_WS_WIN - not found -- Looking for Q_WS_QWS -- Looking for Q_WS_QWS - not found -- Looking for Q_WS_MAC -- Looking for Q_WS_MAC - not found -- Found Qt4: /usr/bin/qmake (found suitable version "4.8.7", minimum required is "4.3.0") Qt4 Found OK () CMake Warning (dev) at CMakeLists.txt:698 (EXPORT_LIBRARY_DEPENDENCIES): Policy CMP0033 is not set: The export_library_dependencies command should not be called. Run "cmake --help-policy CMP0033" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BUILD_DOCUMENTATION CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_SYSCONFDIR DART_TESTING_TIMEOUT -- Build files have been written to: /<>/obj-x86_64-linux-gnu cd /<> make[1]: Leaving directory '/<>' dh_auto_build -a -O--parallel dh_auto_build: Compatibility levels before 9 are deprecated (level 7 in use) cd obj-x86_64-linux-gnu make -j16 make[1]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -H/<> -B/<>/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles /<>/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Utilities/NrrdIO /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Utilities/mxml /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/Utilities/mxml /<>/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/Numerics /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/Numerics /<>/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkMxml make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' Scanning dependencies of target NrrdIO make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /<>/Utilities/mxml/mxml-attr.c [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /<>/Utilities/mxml/mxml-index.c cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /<>/Utilities/mxml/mxml-entity.c [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /<>/Utilities/mxml/mxml-get.c [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /<>/Utilities/mxml/mxml-string.c [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o Scanning dependencies of target cmtkNumerics cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /<>/Utilities/mxml/mxml-node.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /<>/Utilities/mxml/mxml-private.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/754.o -c /<>/Utilities/NrrdIO/754.c cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /<>/Utilities/mxml/mxml-file.c cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /<>/Utilities/mxml/mxml-set.c make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /<>/Utilities/mxml/mxml-search.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o [ 2%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /<>/Utilities/NrrdIO/enumsNrrd.c cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /<>/libs/Numerics/ap.cxx [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/comment.o -c /<>/Utilities/NrrdIO/comment.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/string.o -c /<>/Utilities/NrrdIO/string.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/mop.o -c /<>/Utilities/NrrdIO/mop.c [ 2%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /<>/libs/Numerics/bdsvd.cxx [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /<>/Utilities/NrrdIO/defaultsNrrd.c [ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o [ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /<>/libs/Numerics/bidiagonal.cxx cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /<>/libs/Numerics/blas.cxx [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o [ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/parseAir.o -c /<>/Utilities/NrrdIO/parseAir.c cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /<>/libs/Numerics/cholesky.cxx [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/dio.o -c /<>/Utilities/NrrdIO/dio.c cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/format.o -c /<>/Utilities/NrrdIO/format.c [ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /<>/libs/Numerics/det.cxx cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /<>/Utilities/NrrdIO/parseNrrd.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /<>/Utilities/NrrdIO/formatEPS.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encoding.o -c /<>/Utilities/NrrdIO/encoding.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /<>/Utilities/NrrdIO/formatNRRD.c cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /<>/Utilities/NrrdIO/encodingAscii.c [ 5%] Linking C shared library ../../bin/libcmtkMxml.so cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /<>/Utilities/NrrdIO/formatPNG.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /<>/Utilities/NrrdIO/encodingBzip2.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /<>/Utilities/NrrdIO/formatPNM.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/accessors.o -c /<>/Utilities/NrrdIO/accessors.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o [ 6%] Built target cmtkMxml cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /<>/Utilities/NrrdIO/encodingGzip.c cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatText.o -c /<>/Utilities/NrrdIO/formatText.c make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/System /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/System /<>/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= [ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /<>/libs/Numerics/gammaf.cxx [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/array.o -c /<>/Utilities/NrrdIO/array.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /<>/Utilities/NrrdIO/encodingHex.c cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /<>/Utilities/NrrdIO/formatVTK.c Scanning dependencies of target cmtkSystem make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build [ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /<>/libs/Numerics/hsschur.cxx [ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /<>/libs/Numerics/hessenberg.cxx make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 7%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/read.o -c /<>/Utilities/NrrdIO/read.c cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /<>/libs/System/cmtkCommandLine.cxx [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /<>/libs/Numerics/ibetaf.cxx [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /<>/Utilities/NrrdIO/arraysNrrd.c cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /<>/Utilities/NrrdIO/encodingRaw.c cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /<>/libs/Numerics/lbfgsb.cxx [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /<>/libs/Numerics/lq.cxx [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /<>/libs/Numerics/lu.cxx [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/gzio.o -c /<>/Utilities/NrrdIO/gzio.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/reorder.o -c /<>/Utilities/NrrdIO/reorder.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/write.o -c /<>/Utilities/NrrdIO/write.c cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/axis.o -c /<>/Utilities/NrrdIO/axis.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/endianAir.o -c /<>/Utilities/NrrdIO/endianAir.c [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /<>/libs/Numerics/normaldistr.cxx cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /<>/Utilities/NrrdIO/biffbiff.c cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /<>/Utilities/NrrdIO/keyvalue.c [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /<>/Utilities/NrrdIO/biffmsg.c [ 10%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /<>/libs/System/cmtkCommandLineCallback.cxx cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /<>/libs/Numerics/nsevd.cxx [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /<>/libs/Numerics/qr.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /<>/Utilities/NrrdIO/endianNrrd.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /<>/Utilities/NrrdIO/methodsNrrd.c [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/sane.o -c /<>/Utilities/NrrdIO/sane.c cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /<>/libs/Numerics/reflections.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/miscAir.o -c /<>/Utilities/NrrdIO/miscAir.c cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/enum.o -c /<>/Utilities/NrrdIO/enum.c [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /<>/libs/Numerics/rotations.cxx [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/simple.o -c /<>/Utilities/NrrdIO/simple.c [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /<>/libs/Numerics/sevd.cxx [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /<>/libs/Numerics/sblas.cxx [ 12%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /<>/libs/System/cmtkCommandLineItem.cxx [ 12%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /<>/libs/System/cmtkCommandLineKeyToAction.cxx [ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /<>/libs/System/cmtkCommandLineKeyToActionEnum.cxx [ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /<>/libs/Numerics/spddet.cxx cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /<>/libs/System/cmtkCommandLineKeyToActionSingle.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /<>/libs/Numerics/studenttdistr.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /<>/libs/Numerics/studentttests.cxx [ 14%] Linking C shared library ../../bin/libNrrdIO.so cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /<>/libs/Numerics/svd.cxx /usr/bin/cc -fPIC -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /<>/libs/Numerics/tdevd.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /<>/libs/Numerics/tridiagonal.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o [ 15%] Built target NrrdIO cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /<>/libs/Numerics/mersenne.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /<>/libs/System/cmtkCommandLineNonOptionParameter.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /<>/libs/System/cmtkCommandLineNonOptionParameterVector.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /<>/libs/System/cmtkCommandLineHelp.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /<>/libs/System/cmtkCommandLineMan.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /<>/libs/System/cmtkCommandLineWiki.cxx [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /<>/libs/System/cmtkCommandLineXML.cxx [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /<>/libs/System/cmtkCompressedStream.cxx [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /<>/libs/System/cmtkCompressedStreamFile.cxx [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /<>/libs/System/cmtkCompressedStreamPipe.cxx cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -c /<>/libs/System/cmtkCompressedStreamReaderBase.cxx [ 17%] Linking CXX shared library ../../bin/libcmtkNumerics.so cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o CMakeFiles/cmtkNumerics.dir/det.cxx.o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o CMakeFiles/cmtkNumerics.dir/lq.cxx.o CMakeFiles/cmtkNumerics.dir/lu.cxx.o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o CMakeFiles/cmtkNumerics.dir/qr.cxx.o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o CMakeFiles/cmtkNumerics.dir/svd.cxx.o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,::::::::::::: [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /<>/libs/System/cmtkCompressedStreamZlib.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /<>/libs/System/cmtkConsole.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /<>/libs/System/cmtkFileUtils.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 17%] Built target cmtkNumerics [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /<>/libs/System/cmtkMemory.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /<>/libs/System/cmtkMountPoints.cxx cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /<>/libs/System/cmtkProgress.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /<>/libs/System/cmtkProgressConsole.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /<>/libs/System/cmtkStackBacktrace.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /<>/libs/System/cmtkRegressionTracker.cxx cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /<>/libs/System/cmtkStrUtility.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /<>/libs/System/cmtkThreads.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /<>/libs/System/cmtkThreadPoolThreads.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -c /<>/libs/System/cmtkThreadSemaphore.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -c /<>/libs/System/cmtkTimers.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs 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CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 19%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/Base /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/Base /<>/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkBase make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 19%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /<>/libs/Base/cmtkActiveDeformationModel.cxx [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /<>/libs/Base/cmtkActiveShapeModel.cxx cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /<>/libs/Base/cmtkAffineXform.cxx cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /<>/libs/Base/cmtkAnatomicalOrientation.cxx [ 21%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /<>/libs/Base/cmtkCompatibilityMatrix4x4.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /<>/libs/Base/cmtkDataGridLocalCorrelation.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /<>/libs/Base/cmtkDataGridConnectedComponents.cxx cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /<>/libs/Base/cmtkAnatomicalOrientationBase.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /<>/libs/Base/cmtkDataGrid.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /<>/libs/Base/cmtkDataGridMorphologicalOperators.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /<>/libs/Base/cmtkDeformationField.cxx cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /<>/libs/Base/cmtkDataGridFilter.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /<>/libs/Base/cmtkDataGrid_Crop.cxx cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /<>/libs/Base/cmtkAffineXformUniformVolume.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /<>/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /<>/libs/Base/cmtkBitVector.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /<>/libs/Base/cmtkDeformationField_Jacobian.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -c /<>/libs/Base/cmtkDirectionSet.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -c /<>/libs/Base/cmtkFilterVolume.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o -c /<>/libs/Base/cmtkFitAffineToLandmarks.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /<>/libs/Base/cmtkFitAffineToWarpXform.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -c /<>/libs/Base/cmtkFitAffineToXformList.cxx In file included from /<>/libs/Base/cmtkDataGridMorphologicalOperators.cxx:35: /<>/libs/Base/cmtkTemplateArray.h:434:12: warning: taking the absolute value of unsigned type 'unsigned char' has no effect [-Wabsolute-value] Data[i] = std::abs( Data[i] ); ^ /<>/libs/Base/cmtkTemplateArray.h:120:3: note: in instantiation of member function 'cmtk::TemplateArray::MakeAbsolute' requested here TemplateArray ( const size_t datasize = 0 ) ^ /<>/libs/Base/cmtkTemplateArray.h:79:41: note: in instantiation of member function 'cmtk::TemplateArray::TemplateArray' requested here return typename Self::SmartPtr( new Self( size ) ); ^ /<>/libs/Base/cmtkDataGridMorphologicalOperators.cxx:66:48: note: in instantiation of member function 'cmtk::TemplateArray::Create' requested here ByteArray::SmartPtr erodedArray = ByteArray::Create( dataArray->GetDataSize() ); ^ /<>/libs/Base/cmtkTemplateArray.h:434:12: note: remove the call to 'abs' since unsigned values cannot be negative Data[i] = std::abs( Data[i] ); ^~~~~~~~ [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /<>/libs/Base/cmtkFitPolynomialToLandmarks.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /<>/libs/Base/cmtkFitRigidToLandmarks.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /<>/libs/Base/cmtkFitSplineWarpToDeformationField.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /<>/libs/Base/cmtkFitSplineWarpToLandmarks.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /<>/libs/Base/cmtkFitSplineWarpToXformList.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /<>/libs/Base/cmtkFitToXformListBase.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /<>/libs/Base/cmtkFunctional.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /<>/libs/Base/cmtkGeneralLinearModel.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /<>/libs/Base/cmtkHistogram.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /<>/libs/Base/cmtkHypothesisTests.cxx 1 warning generated. [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /<>/libs/Base/cmtkImageOperation.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /<>/libs/Base/cmtkImageOperationCropRegion.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /<>/libs/Base/cmtkImageOperationCropThreshold.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /<>/libs/Base/cmtkImageOperationDistanceMap.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /<>/libs/Base/cmtkImageOperationDownsample.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /<>/libs/Base/cmtkImageOperationHistogramEqualization.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /<>/libs/Base/cmtkImageOperationMapValues.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /<>/libs/Base/cmtkImageOperationRegionFilter.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /<>/libs/Base/cmtkImageOperationResampleIsotropic.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /<>/libs/Base/cmtkImageOperationScaleToRange.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /<>/libs/Base/cmtkImageOperationThreshold.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /<>/libs/Base/cmtkImageOperationOtsuThreshold.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /<>/libs/Base/cmtkImageOperationPruneHistogram.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /<>/libs/Base/cmtkImageOperationRevert.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /<>/libs/Base/cmtkJointHistogram.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /<>/libs/Base/cmtkJointHistogramBase.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /<>/libs/Base/cmtkLandmark.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o -c /<>/libs/Base/cmtkLandmarkPair.cxx /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:45: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:67: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:89: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:111: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:131: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:151: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~ %lld 6 warnings generated. /<>/libs/Base/cmtkImageOperationDownsample.cxx:54:55: warning: format specifies type 'int *' but the argument has type 'Types::GridIndexType *' (aka 'long long *') [-Wformat] const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); ~~~ ^~~~~~~~~ %5lld /<>/libs/Base/cmtkImageOperationDownsample.cxx:54:66: warning: format specifies type 'int *' but the argument has type 'Types::GridIndexType *' (aka 'long long *') [-Wformat] const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); ~~~ ^~~~~~~~~ %5lld /<>/libs/Base/cmtkImageOperationDownsample.cxx:54:77: warning: format specifies type 'int *' but the argument has type 'Types::GridIndexType *' (aka 'long long *') [-Wformat] const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); ~~~ ^~~~~~~~~ %5lld [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -c /<>/libs/Base/cmtkLandmarkList.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -c /<>/libs/Base/cmtkLandmarkPairList.cxx 3 warnings generated. [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /<>/libs/Base/cmtkMagphanEMR051.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -c /<>/libs/Base/cmtkMagphanEMR051_GetPhantomImage.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o -c /<>/libs/Base/cmtkMathFunctionWrappers.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -c /<>/libs/Base/cmtkMathUtil_LinAlg.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -c /<>/libs/Base/cmtkMathUtil_Random.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o -c /<>/libs/Base/cmtkMathUtil_Statistics.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o -c /<>/libs/Base/cmtkMatrix3x3.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -c /<>/libs/Base/cmtkMatrix4x4.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /<>/libs/Base/cmtkMetaInformationObject.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /<>/libs/Base/cmtkParametricPlane.cxx cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -c /<>/libs/Base/cmtkPolynomialXform.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -c /<>/libs/Base/cmtkScalarImage.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -c /<>/libs/Base/cmtkScalarImageGradientField.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /<>/libs/Base/cmtkSegmentationLabel.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -c /<>/libs/Base/cmtkSplineWarpXform.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -c /<>/libs/Base/cmtkSplineWarpXform_Inverse.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o -c /<>/libs/Base/cmtkSplineWarpXform_Jacobian.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -c /<>/libs/Base/cmtkSplineWarpXform_Rigidity.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -c /<>/libs/Base/cmtkSplineWarpXformUniformVolume.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -c /<>/libs/Base/cmtkTransformChangeToSpaceAffine.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o -c /<>/libs/Base/cmtkTransformChangeFromSpaceAffine.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -c /<>/libs/Base/cmtkTransformedVolumeAxes.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -c /<>/libs/Base/cmtkTypedArray.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /<>/libs/Base/cmtkTypedArray_Statistics.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /<>/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /<>/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /<>/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /<>/libs/Base/cmtkTypes.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /<>/libs/Base/cmtkUniformDistanceMap.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /<>/libs/Base/cmtkUniformVolume.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /<>/libs/Base/cmtkUniformVolume_Crop.cxx In file included from /<>/libs/Base/cmtkTypedArray.cxx:34: /<>/libs/Base/cmtkTemplateArray.h:434:12: warning: taking the absolute value of unsigned type 'unsigned char' has no effect [-Wabsolute-value] Data[i] = std::abs( Data[i] ); ^ /<>/libs/Base/cmtkTemplateArray.h:104:3: note: in instantiation of member function 'cmtk::TemplateArray::MakeAbsolute' requested here TemplateArray ( void *const data, const size_t datasize, const bool paddingflag, const void* paddingData, const Memory::DeallocatorFunctionPointer deallocator = NULL ) ^ /<>/libs/Base/cmtkTypedArray.cxx:123:34: note: in instantiation of member function 'cmtk::TemplateArray::TemplateArray' requested here return Self::SmartPtr( new ByteArray( data, size, paddingFlag, paddingData, deallocator ) ); ^ /<>/libs/Base/cmtkTemplateArray.h:434:12: note: remove the call to 'abs' since unsigned values cannot be negative Data[i] = std::abs( Data[i] ); ^~~~~~~~ /<>/libs/Base/cmtkTemplateArray.h:434:12: warning: taking the absolute value of unsigned type 'unsigned short' has no effect [-Wabsolute-value] Data[i] = std::abs( Data[i] ); ^ /<>/libs/Base/cmtkTemplateArray.h:104:3: note: in instantiation of member function 'cmtk::TemplateArray::MakeAbsolute' requested here TemplateArray ( void *const data, const size_t datasize, const bool paddingflag, const void* paddingData, const Memory::DeallocatorFunctionPointer deallocator = NULL ) ^ /<>/libs/Base/cmtkTypedArray.cxx:132:34: note: in instantiation of member function 'cmtk::TemplateArray::TemplateArray' requested here return Self::SmartPtr( new UShortArray( data, size, paddingFlag, paddingData, deallocator ) ); ^ /<>/libs/Base/cmtkTemplateArray.h:434:12: note: remove the call to 'abs' since unsigned values cannot be negative Data[i] = std::abs( Data[i] ); ^~~~~~~~ [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /<>/libs/Base/cmtkUniformVolume_Differential.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -c /<>/libs/Base/cmtkUniformVolume_Resample.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -c /<>/libs/Base/cmtkUniformVolume_Space.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -c /<>/libs/Base/cmtkUniformVolumeLaplaceFilter.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -c /<>/libs/Base/cmtkUniformVolumeGaussianFilter.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /<>/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -c /<>/libs/Base/cmtkUniformVolumeInterpolatorPartialVolume.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -c /<>/libs/Base/cmtkUniformVolumeMorphologicalOperators.cxx cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o -c /<>/libs/Base/cmtkUniformVolumePainter.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o -c /<>/libs/Base/cmtkVolumeClipping.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o -c /<>/libs/Base/cmtkVolume.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -c /<>/libs/Base/cmtkVolumeGridToGridLookup.cxx 2 warnings generated. [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /<>/libs/Base/cmtkWarpXform.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /<>/libs/Base/cmtkXform.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /<>/libs/Base/cmtkXform_Inverse.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o -c /<>/libs/Base/cmtkXformList.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -c /<>/libs/Base/cmtkXformListEntry.cxx [ 37%] Linking CXX shared library ../../bin/libcmtkBase.so cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkBase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkBase.so -o ../../bin/libcmtkBase.so CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 37%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make -f libs/Pipeline/CMakeFiles/cmtkPipeline.dir/build.make libs/Pipeline/CMakeFiles/cmtkPipeline.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/IO /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/IO /<>/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/Pipeline /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/Pipeline /<>/obj-x86_64-linux-gnu/libs/Pipeline/CMakeFiles/cmtkPipeline.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkPipeline make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Pipeline/CMakeFiles/cmtkPipeline.dir/build.make libs/Pipeline/CMakeFiles/cmtkPipeline.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkColormap.cxx.o [ 37%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkImageRGB.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkColormap.cxx.o -c /<>/libs/Pipeline/cmtkColormap.cxx cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkImageRGB.cxx.o -c /<>/libs/Pipeline/cmtkImageRGB.cxx [ 37%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkObject.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkObject.cxx.o -c /<>/libs/Pipeline/cmtkObject.cxx [ 38%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkImageToImageRGB.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkImageToImageRGB.cxx.o -c /<>/libs/Pipeline/cmtkImageToImageRGB.cxx [ 38%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkPipelineObject.cxx.o [ 38%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkRenderer.cxx.o [ 38%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkPlane.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkPipelineObject.cxx.o -c /<>/libs/Pipeline/cmtkPipelineObject.cxx cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkPlane.cxx.o -c /<>/libs/Pipeline/cmtkPlane.cxx cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkRenderer.cxx.o -c /<>/libs/Pipeline/cmtkRenderer.cxx [ 38%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkImage.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkImage.cxx.o -c /<>/libs/Pipeline/cmtkImage.cxx Scanning dependencies of target cmtkIO make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /<>/libs/IO/cmtkImageFileDICOM.cxx cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /<>/libs/IO/cmtkSplineWarpXformITKIO.cxx cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /<>/libs/IO/cmtkClassStreamAffineXform.cxx [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /<>/libs/IO/cmtkClassStreamStudyList.cxx cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /<>/libs/IO/cmtkClassStreamPolynomialXform.cxx [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /<>/libs/IO/cmtkAffineXformITKIO.cxx [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /<>/libs/IO/cmtkClassStreamWarpXform.cxx cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /<>/libs/IO/cmtkClassStreamParametricPlane.cxx [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /<>/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /<>/libs/IO/cmtkFileFormat.cxx [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /<>/libs/IO/cmtkImageOperationMatchIntensities.cxx cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /<>/libs/IO/cmtkImageOperationApplyMask.cxx cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /<>/libs/IO/cmtkImageStackDICOM.cxx In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:25: /usr/include/dcmtk/config/osconfig.h:1117:2: error: DCMTK was configured to use the C++11 STL, but your compiler is not configured for building with C++11 features. #error\ ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: In file included from /usr/include/dcmtk/ofstd/oftypes.h:38: In file included from /usr/bin/../lib/gcc/x86_64-linux-gnu/7.2.0/../../../../include/c++/7.2.0/cstdint:35: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.2.0/../../../../include/c++/7.2.0/bits/c++0x_warning.h:32:2: error: This file requires compiler and library support for the ISO C++ 2011 standard. This support must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support \ ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:46:15: error: no type named 'int8_t' in namespace 'std'; did you mean simply 'int8_t'? using Sint8 = std::int8_t; ^~~~~ /usr/include/x86_64-linux-gnu/sys/types.h:194:1: note: 'int8_t' declared here __intN_t (8, __QI__); ^ /usr/include/x86_64-linux-gnu/sys/types.h:188:15: note: expanded from macro '__intN_t' typedef int int##N##_t __attribute__ ((__mode__ (MODE))) ^ :20:1: note: expanded from here int8_t ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:47:15: error: no type named 'uint8_t' in namespace 'std'; did you mean simply 'uint8_t'? using Uint8 = std::uint8_t; ^~~~~ /usr/include/stdint.h:48:24: note: 'uint8_t' declared here typedef unsigned char uint8_t; ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:48:16: error: no type named 'int16_t' in namespace 'std'; did you mean simply 'int16_t'? using Sint16 = std::int16_t; ^~~~~ /usr/include/x86_64-linux-gnu/sys/types.h:195:1: note: 'int16_t' declared here __intN_t (16, __HI__); ^ /usr/include/x86_64-linux-gnu/sys/types.h:188:15: note: expanded from macro '__intN_t' typedef int int##N##_t __attribute__ ((__mode__ (MODE))) ^ :22:1: note: expanded from here int16_t ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:49:16: error: no type named 'uint16_t' in namespace 'std'; did you mean simply 'uint16_t'? using Uint16 = std::uint16_t; ^~~~~ /usr/include/stdint.h:49:28: note: 'uint16_t' declared here typedef unsigned short int uint16_t; ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:50:16: error: no type named 'int32_t' in namespace 'std'; did you mean simply 'int32_t'? using Sint32 = std::int32_t; ^~~~~ /usr/include/x86_64-linux-gnu/sys/types.h:196:1: note: 'int32_t' declared here __intN_t (32, __SI__); ^ /usr/include/x86_64-linux-gnu/sys/types.h:188:15: note: expanded from macro '__intN_t' typedef int int##N##_t __attribute__ ((__mode__ (MODE))) ^ :24:1: note: expanded from here int32_t ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:51:16: error: no type named 'uint32_t' in namespace 'std'; did you mean simply 'uint32_t'? using Uint32 = std::uint32_t; ^~~~~ /usr/include/stdint.h:51:23: note: 'uint32_t' declared here typedef unsigned int uint32_t; ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:52:16: error: no type named 'int64_t' in namespace 'std'; did you mean simply 'int64_t'? using Sint64 = std::int64_t; ^~~~~ /usr/include/x86_64-linux-gnu/sys/types.h:197:1: note: 'int64_t' declared here __intN_t (64, __DI__); ^ /usr/include/x86_64-linux-gnu/sys/types.h:188:15: note: expanded from macro '__intN_t' typedef int int##N##_t __attribute__ ((__mode__ (MODE))) ^ :26:1: note: expanded from here int64_t ^ [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /<>/libs/IO/cmtkLandmarkIO.cxx In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:53:16: error: no type named 'uint64_t' in namespace 'std'; did you mean simply 'uint64_t'? using Uint64 = std::uint64_t; ^~~~~ /usr/include/stdint.h:55:27: note: 'uint64_t' declared here typedef unsigned long int uint64_t; ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:56:20: error: no type named 'intptr_t' in namespace 'std'; did you mean simply 'intptr_t'? using OFintptr_t = std::intptr_t; ^~~~~ /usr/include/stdint.h:119:19: note: 'intptr_t' declared here typedef long int intptr_t; ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:57:21: error: no type named 'uintptr_t' in namespace 'std'; did you mean simply 'uintptr_t'? using OFuintptr_t = std::uintptr_t; ^~~~~ /usr/include/stdint.h:122:27: note: 'uintptr_t' declared here typedef unsigned long int uintptr_t; ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:58:26: error: no type named 'nullptr_t' in namespace 'std' using OFnullptr_t = std::nullptr_t; ~~~~~^ /usr/include/dcmtk/ofstd/oftypes.h:60:1: error: unknown type name 'constexpr' constexpr OFnullptr_t OFnullptr = nullptr; ^ /usr/include/dcmtk/ofstd/oftypes.h:60:22: error: expected ';' after top level declarator constexpr OFnullptr_t OFnullptr = nullptr; ^ /usr/include/dcmtk/ofstd/oftypes.h:61:1: error: unknown type name 'constexpr' constexpr const OFBool OFTrue = true; ^ /usr/include/dcmtk/ofstd/oftypes.h:61:11: error: expected unqualified-id constexpr const OFBool OFTrue = true; ^ /usr/include/dcmtk/ofstd/oftypes.h:62:1: error: unknown type name 'constexpr' constexpr const OFBool OFFalse = false; ^ /usr/include/dcmtk/ofstd/oftypes.h:62:11: error: expected unqualified-id constexpr const OFBool OFFalse = false; ^ fatal error: too many errors emitted, stopping now [-ferror-limit=] [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /<>/libs/IO/cmtkLandmarkListIO.cxx [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /<>/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /<>/libs/IO/cmtkSegmentationLabelIO.cxx 20 errors generated. libs/IO/CMakeFiles/cmtkIO.dir/build.make:281: recipe for target 'libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o' failed make[3]: *** [libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o] Error 1 make[3]: *** Waiting for unfinished jobs.... [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /<>/libs/IO/cmtkSiemensCSAHeader.cxx [ 41%] Linking CXX shared library ../../bin/libcmtkPipeline.so cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkPipeline.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkPipeline.so -o ../../bin/libcmtkPipeline.so CMakeFiles/cmtkPipeline.dir/cmtkColormap.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkImage.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkImageRGB.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkImageToImageRGB.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkObject.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkPipelineObject.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkPlane.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkRenderer.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:25: /usr/include/dcmtk/config/osconfig.h:1117:2: error: DCMTK was configured to use the C++11 STL, but your compiler is not configured for building with C++11 features. #error\ ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: In file included from /usr/include/dcmtk/ofstd/oftypes.h:38: In file included from /usr/bin/../lib/gcc/x86_64-linux-gnu/7.2.0/../../../../include/c++/7.2.0/cstdint:35: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.2.0/../../../../include/c++/7.2.0/bits/c++0x_warning.h:32:2: error: This file requires compiler and library support for the ISO C++ 2011 standard. This support must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support \ ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:46:15: error: no type named 'int8_t' in namespace 'std'; did you mean simply 'int8_t'? using Sint8 = std::int8_t; ^~~~~ /usr/include/x86_64-linux-gnu/sys/types.h:194:1: note: 'int8_t' declared here __intN_t (8, __QI__); ^ /usr/include/x86_64-linux-gnu/sys/types.h:188:15: note: expanded from macro '__intN_t' typedef int int##N##_t __attribute__ ((__mode__ (MODE))) ^ :20:1: note: expanded from here int8_t ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:47:15: error: no type named 'uint8_t' in namespace 'std'; did you mean simply 'uint8_t'? using Uint8 = std::uint8_t; ^~~~~ /usr/include/stdint.h:48:24: note: 'uint8_t' declared here typedef unsigned char uint8_t; ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:48:16: error: no type named 'int16_t' in namespace 'std'; did you mean simply 'int16_t'? using Sint16 = std::int16_t; ^~~~~ /usr/include/x86_64-linux-gnu/sys/types.h:195:1: note: 'int16_t' declared here __intN_t (16, __HI__); ^ /usr/include/x86_64-linux-gnu/sys/types.h:188:15: note: expanded from macro '__intN_t' typedef int int##N##_t __attribute__ ((__mode__ (MODE))) ^ :22:1: note: expanded from here int16_t ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:49:16: error: no type named 'uint16_t' in namespace 'std'; did you mean simply 'uint16_t'? using Uint16 = std::uint16_t; ^~~~~ /usr/include/stdint.h:49:28: note: 'uint16_t' declared here typedef unsigned short int uint16_t; ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:50:16: error: no type named 'int32_t' in namespace 'std'; did you mean simply 'int32_t'? using Sint32 = std::int32_t; ^~~~~ /usr/include/x86_64-linux-gnu/sys/types.h:196:1: note: 'int32_t' declared here __intN_t (32, __SI__); ^ /usr/include/x86_64-linux-gnu/sys/types.h:188:15: note: expanded from macro '__intN_t' typedef int int##N##_t __attribute__ ((__mode__ (MODE))) ^ :24:1: note: expanded from here int32_t ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:51:16: error: no type named 'uint32_t' in namespace 'std'; did you mean simply 'uint32_t'? using Uint32 = std::uint32_t; ^~~~~ /usr/include/stdint.h:51:23: note: 'uint32_t' declared here typedef unsigned int uint32_t; ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:52:16: error: no type named 'int64_t' in namespace 'std'; did you mean simply 'int64_t'? using Sint64 = std::int64_t; ^~~~~ /usr/include/x86_64-linux-gnu/sys/types.h:197:1: note: 'int64_t' declared here __intN_t (64, __DI__); ^ /usr/include/x86_64-linux-gnu/sys/types.h:188:15: note: expanded from macro '__intN_t' typedef int int##N##_t __attribute__ ((__mode__ (MODE))) ^ :26:1: note: expanded from here int64_t ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:53:16: error: no type named 'uint64_t' in namespace 'std'; did you mean simply 'uint64_t'? using Uint64 = std::uint64_t; ^~~~~ /usr/include/stdint.h:55:27: note: 'uint64_t' declared here typedef unsigned long int uint64_t; ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:56:20: error: no type named 'intptr_t' in namespace 'std'; did you mean simply 'intptr_t'? using OFintptr_t = std::intptr_t; ^~~~~ /usr/include/stdint.h:119:19: note: 'intptr_t' declared here typedef long int intptr_t; ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:57:21: error: no type named 'uintptr_t' in namespace 'std'; did you mean simply 'uintptr_t'? using OFuintptr_t = std::uintptr_t; ^~~~~ /usr/include/stdint.h:122:27: note: 'uintptr_t' declared here typedef unsigned long int uintptr_t; ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: In file included from /<>/libs/IO/cmtkImageFileDICOM.h:43: In file included from /usr/include/dcmtk/dcmdata/dctk.h:28: In file included from /usr/include/dcmtk/dcmdata/dctypes.h:27: In file included from /usr/include/dcmtk/oflog/oflog.h:28: In file included from /usr/include/dcmtk/oflog/logger.h:34: In file included from /usr/include/dcmtk/oflog/loglevel.h:35: In file included from /usr/include/dcmtk/ofstd/ofvector.h:47: /usr/include/dcmtk/ofstd/oftypes.h:58:26: error: no type named 'nullptr_t' in namespace 'std' using OFnullptr_t = std::nullptr_t; ~~~~~^ /usr/include/dcmtk/ofstd/oftypes.h:60:1: error: unknown type name 'constexpr' constexpr OFnullptr_t OFnullptr = nullptr; ^ /usr/include/dcmtk/ofstd/oftypes.h:60:22: error: expected ';' after top level declarator constexpr OFnullptr_t OFnullptr = nullptr; ^ /usr/include/dcmtk/ofstd/oftypes.h:61:1: error: unknown type name 'constexpr' constexpr const OFBool OFTrue = true; ^ /usr/include/dcmtk/ofstd/oftypes.h:61:11: error: expected unqualified-id constexpr const OFBool OFTrue = true; ^ /usr/include/dcmtk/ofstd/oftypes.h:62:1: error: unknown type name 'constexpr' constexpr const OFBool OFFalse = false; ^ /usr/include/dcmtk/ofstd/oftypes.h:62:11: error: expected unqualified-id constexpr const OFBool OFFalse = false; ^ fatal error: too many errors emitted, stopping now [-ferror-limit=] make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 41%] Built target cmtkPipeline 20 errors generated. libs/IO/CMakeFiles/cmtkIO.dir/build.make:353: recipe for target 'libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o' failed make[3]: *** [libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o] Error 1 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' CMakeFiles/Makefile2:4388: recipe for target 'libs/IO/CMakeFiles/cmtkIO.dir/all' failed make[2]: *** [libs/IO/CMakeFiles/cmtkIO.dir/all] Error 2 make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' Makefile:165: recipe for target 'all' failed make[1]: *** [all] Error 2 make[1]: Leaving directory '/<>/obj-x86_64-linux-gnu' dh_auto_build: make -j16 returned exit code 2 cd /<> debian/rules:33: recipe for target 'build-arch' failed make: *** [build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 2017-08-20T18:39:50Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 34328 Build-Time: 16 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 19 Job: cmtk_3.3.1-1.2 Machine Architecture: amd64 Package: cmtk Package-Time: 58 Source-Version: 3.3.1-1.2 Space: 34328 Status: attempted Version: 3.3.1-1.2 -------------------------------------------------------------------------------- Finished at 2017-08-20T18:39:50Z Build needed 00:00:58, 34328k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 59.130762676s DC-Time-Estimation: 59.130762676 versus expected 157 (r/m: 1.6551323354353278 ; m: 59.130762676)