DC-Build-Header: mcmcpack 1.1-1-1 / Sun Sep 11 13:02:40 +0200 2011 sbuild (Debian sbuild) 0.62.2 (05 Apr 2011) on talc-104.nancy.grid5000.fr ╔══════════════════════════════════════════════════════════════════════════════╗ ║ mcmcpack 1.1-1-1 (amd64) 11 Sep 2011 13:02 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: mcmcpack Version: 1.1-1-1 Source Version: 1.1-1-1 Distribution: lsid64c Architecture: amd64 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Ign http://localhost sid InRelease Hit http://localhost sid Release.gpg Hit http://localhost sid Release Ign http://localhost sid/main Sources/DiffIndex Ign http://localhost sid/main amd64 Packages/DiffIndex Ign http://localhost sid/main TranslationIndex Hit http://localhost sid/main Sources Hit http://localhost sid/main amd64 Packages Ign http://localhost sid/main Translation-en Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: binutils cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-bin libc-dev-bin libc6 libc6-dev libgcc1 libgomp1 libquadmath0 libstdc++6 libstdc++6-4.6-dev multiarch-support 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 34.4 MB of archives. After this operation, 1073 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libc6-dev libc-dev-bin libgomp1 gcc-4.6-base libgcc1 cpp-4.6 libquadmath0 libstdc++6-4.6-dev g++-4.6 gcc-4.6 libstdc++6 binutils libc-bin libc6 multiarch-support Authentication warning overridden. Get:1 http://localhost/debian/ sid/main libc6-dev amd64 2.13-20 [2637 kB] Get:2 http://localhost/debian/ sid/main libc-dev-bin amd64 2.13-20 [217 kB] Get:3 http://localhost/debian/ sid/main libgomp1 amd64 4.6.1-10 [25.7 kB] Get:4 http://localhost/debian/ sid/main gcc-4.6-base amd64 4.6.1-10 [135 kB] Get:5 http://localhost/debian/ sid/main libgcc1 amd64 1:4.6.1-10 [42.9 kB] Get:6 http://localhost/debian/ sid/main cpp-4.6 amd64 4.6.1-10 [4816 kB] Get:7 http://localhost/debian/ sid/main libquadmath0 amd64 4.6.1-10 [126 kB] Get:8 http://localhost/debian/ sid/main libstdc++6-4.6-dev amd64 4.6.1-10 [1660 kB] Get:9 http://localhost/debian/ sid/main g++-4.6 amd64 4.6.1-10 [6952 kB] Get:10 http://localhost/debian/ sid/main gcc-4.6 amd64 4.6.1-10 [7303 kB] Get:11 http://localhost/debian/ sid/main libstdc++6 amd64 4.6.1-10 [337 kB] Get:12 http://localhost/debian/ sid/main binutils amd64 2.21.53.20110910-1 [4844 kB] Get:13 http://localhost/debian/ sid/main libc-bin amd64 2.13-20 [819 kB] Get:14 http://localhost/debian/ sid/main libc6 amd64 2.13-20 [4323 kB] Get:15 http://localhost/debian/ sid/main multiarch-support amd64 2.13-20 [141 kB] Preconfiguring packages ... Fetched 34.4 MB in 0s (63.9 MB/s) (Reading database ... 10788 files and directories currently installed.) Preparing to replace libc6-dev 2.13-18 (using .../libc6-dev_2.13-20_amd64.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-dev-bin 2.13-18 (using .../libc-dev-bin_2.13-20_amd64.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libgomp1 4.6.1-9 (using .../libgomp1_4.6.1-10_amd64.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.6-base 4.6.1-9 (using .../gcc-4.6-base_4.6.1-10_amd64.deb) ... Unpacking replacement gcc-4.6-base ... Setting up gcc-4.6-base (4.6.1-10) ... (Reading database ... 10788 files and directories currently installed.) Preparing to replace libgcc1 1:4.6.1-9 (using .../libgcc1_1%3a4.6.1-10_amd64.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.6.1-10) ... (Reading database ... 10788 files and directories currently installed.) Preparing to replace cpp-4.6 4.6.1-9 (using .../cpp-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement cpp-4.6 ... Preparing to replace libquadmath0 4.6.1-9 (using .../libquadmath0_4.6.1-10_amd64.deb) ... Unpacking replacement libquadmath0 ... Preparing to replace libstdc++6-4.6-dev 4.6.1-9 (using .../libstdc++6-4.6-dev_4.6.1-10_amd64.deb) ... Unpacking replacement libstdc++6-4.6-dev ... Preparing to replace g++-4.6 4.6.1-9 (using .../g++-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement g++-4.6 ... Preparing to replace gcc-4.6 4.6.1-9 (using .../gcc-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement gcc-4.6 ... Preparing to replace libstdc++6 4.6.1-9 (using .../libstdc++6_4.6.1-10_amd64.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.6.1-10) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace binutils 2.21.53.20110823-3 (using .../binutils_2.21.53.20110910-1_amd64.deb) ... Unpacking replacement binutils ... Preparing to replace libc-bin 2.13-18 (using .../libc-bin_2.13-20_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-20) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace libc6 2.13-18 (using .../libc6_2.13-20_amd64.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.13-20) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace multiarch-support 2.13-18 (using .../multiarch-support_2.13-20_amd64.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.13-20) ... Setting up libc-dev-bin (2.13-20) ... Setting up libc6-dev (2.13-20) ... Setting up libgomp1 (4.6.1-10) ... Setting up cpp-4.6 (4.6.1-10) ... Setting up libquadmath0 (4.6.1-10) ... Setting up binutils (2.21.53.20110910-1) ... Setting up gcc-4.6 (4.6.1-10) ... Setting up libstdc++6-4.6-dev (4.6.1-10) ... Setting up g++-4.6 (4.6.1-10) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... Need to get 460 kB of source archives. Get:1 http://localhost/debian/ sid/main mcmcpack 1.1-1-1 (dsc) [1091 B] Get:2 http://localhost/debian/ sid/main mcmcpack 1.1-1-1 (tar) [453 kB] Get:3 http://localhost/debian/ sid/main mcmcpack 1.1-1-1 (diff) [5408 B] Fetched 460 kB in 5s (89.3 kB/s) Download complete and in download only mode Check arch ────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/build/mcmcpack-RSCGCj/resolver-MI3fjT/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/702 B of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! sbuild-build-depends-core-dummy Authentication warning overridden. Selecting previously deselected package sbuild-build-depends-core-dummy. (Reading database ... 10801 files and directories currently installed.) Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Cannot open /var/lib/schroot/mount/lsid64c-2f0d3a81-56a3-4245-aefe-273f90aa6d6c/etc/lsb-release: No such file or directory Merged Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>> 7), r-base-dev (>= 2.10.0), r-cran-coda (>= 0.11-3), r-cran-mass, cdbs Filtered Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>> 7), r-base-dev (>= 2.10.0), r-cran-coda (>= 0.11-3), r-cran-mass, cdbs dpkg-deb: building package `sbuild-build-depends-mcmcpack-dummy' in `/build/mcmcpack-RSCGCj/resolver-1y1l7w/apt_archive/sbuild-build-depends-mcmcpack-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install mcmcpack build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg62 libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core r-base-dev r-cran-coda r-cran-lattice r-cran-mass tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev Suggested packages: wamerican wordlist whois vacation devscripts dh-make curl defoma gettext-doc gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp www-browser libmail-box-perl ess r-doc-info r-doc-pdf r-mathlib r-base-html r-cran-mcmcpack tclreadline gvfs-bin Recommended packages: autotools-dev patchutils autopoint libglib2.0-data shared-mime-info x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl x11-utils x11-xserver-utils The following NEW packages will be installed: bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg62 libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core r-base-dev r-cran-coda r-cran-lattice r-cran-mass sbuild-build-depends-mcmcpack-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev 0 upgraded, 80 newly installed, 0 to remove and 0 not upgraded. Need to get 55.0 MB/55.0 MB of archives. After this operation, 134 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpipeline1 libpcre3 libdatrie1 libexpat1 libfreetype6 ucf ttf-dejavu-core fontconfig-config libfontconfig1 libgfortran3 x11-common libice6 libpixman-1-0 libpng12-0 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxcb-render0 libxcb-shm0 libxrender1 libcairo2 libglib2.0-0 libthai-data libthai0 libxft2 fontconfig libpango1.0-0 libpcrecpp0 libsm6 libxext6 libxss1 libxt6 bsdmainutils groff-base man-db libmagic1 file gettext-base libxml2 html2text libcroco3 libunistring0 gettext intltool-debian po-debconf debhelper cdbs dpatch gfortran-4.6 gfortran libblas3gf libblas-dev libbz2-dev libjpeg62 libjpeg8 libjpeg8-dev liblapack3gf liblapack-dev libncurses5-dev libpaper1 libpaper-utils libpcre3-dev zlib1g-dev libpng12-dev libreadline6-dev libreadline-dev libtiff4 zip unzip xdg-utils tcl8.5 tk8.5 r-base-core r-base-dev r-cran-lattice r-cran-coda r-cran-mass sbuild-build-depends-mcmcpack-dummy Authentication warning overridden. Get:1 http://localhost/debian/ sid/main libpipeline1 amd64 1.2.0-3 [37.9 kB] Get:2 http://localhost/debian/ sid/main libpcre3 amd64 8.12-4 [225 kB] Get:3 http://localhost/debian/ sid/main libdatrie1 amd64 0.2.4-3 [27.6 kB] Get:4 http://localhost/debian/ sid/main libexpat1 amd64 2.0.1-7 [137 kB] Get:5 http://localhost/debian/ sid/main libfreetype6 amd64 2.4.6-2 [435 kB] Get:6 http://localhost/debian/ sid/main ucf all 3.0025+nmu2 [70.6 kB] Get:7 http://localhost/debian/ sid/main ttf-dejavu-core all 2.33-2 [1552 kB] Get:8 http://localhost/debian/ sid/main fontconfig-config all 2.8.0-3 [221 kB] Get:9 http://localhost/debian/ sid/main libfontconfig1 amd64 2.8.0-3 [282 kB] Get:10 http://localhost/debian/ sid/main libgfortran3 amd64 4.6.1-10 [358 kB] Get:11 http://localhost/debian/ sid/main x11-common all 1:7.6+8 [276 kB] Get:12 http://localhost/debian/ sid/main libice6 amd64 2:1.0.7-2 [56.5 kB] Get:13 http://localhost/debian/ sid/main libpixman-1-0 amd64 0.22.2-1 [356 kB] Get:14 http://localhost/debian/ sid/main libpng12-0 amd64 1.2.46-3 [188 kB] Get:15 http://localhost/debian/ sid/main libxau6 amd64 1:1.0.6-3 [17.0 kB] Get:16 http://localhost/debian/ sid/main libxdmcp6 amd64 1:1.1.0-3 [22.9 kB] Get:17 http://localhost/debian/ sid/main libxcb1 amd64 1.7-3 [45.4 kB] Get:18 http://localhost/debian/ sid/main libx11-data all 2:1.4.4-1 [183 kB] Get:19 http://localhost/debian/ sid/main libx11-6 amd64 2:1.4.4-1 [889 kB] Get:20 http://localhost/debian/ sid/main libxcb-render0 amd64 1.7-3 [16.3 kB] Get:21 http://localhost/debian/ sid/main libxcb-shm0 amd64 1.7-3 [9458 B] Get:22 http://localhost/debian/ sid/main libxrender1 amd64 1:0.9.6-2 [31.5 kB] Get:23 http://localhost/debian/ sid/main libcairo2 amd64 1.10.2-6.1 [948 kB] Get:24 http://localhost/debian/ sid/main libglib2.0-0 amd64 2.28.6-1 [1648 kB] Get:25 http://localhost/debian/ sid/main libthai-data all 0.1.15-2 [201 kB] Get:26 http://localhost/debian/ sid/main libthai0 amd64 0.1.15-2 [42.9 kB] Get:27 http://localhost/debian/ sid/main libxft2 amd64 2.2.0-3 [58.1 kB] Get:28 http://localhost/debian/ sid/main fontconfig amd64 2.8.0-3 [334 kB] Get:29 http://localhost/debian/ sid/main libpango1.0-0 amd64 1.28.4-3 [442 kB] Get:30 http://localhost/debian/ sid/main libpcrecpp0 amd64 8.12-4 [113 kB] Get:31 http://localhost/debian/ sid/main libsm6 amd64 2:1.2.0-2 [29.8 kB] Get:32 http://localhost/debian/ sid/main libxext6 amd64 2:1.3.0-3 [52.3 kB] Get:33 http://localhost/debian/ sid/main libxss1 amd64 1:1.2.1-2 [16.9 kB] Get:34 http://localhost/debian/ sid/main libxt6 amd64 1:1.1.1-2 [207 kB] Get:35 http://localhost/debian/ sid/main bsdmainutils amd64 8.2.3 [208 kB] Get:36 http://localhost/debian/ sid/main groff-base amd64 1.21-6 [1150 kB] Get:37 http://localhost/debian/ sid/main man-db amd64 2.6.0.2-2 [1023 kB] Get:38 http://localhost/debian/ sid/main libmagic1 amd64 5.08-1 [246 kB] Get:39 http://localhost/debian/ sid/main file amd64 5.08-1 [51.7 kB] Get:40 http://localhost/debian/ sid/main gettext-base amd64 0.18.1.1-4 [154 kB] Get:41 http://localhost/debian/ sid/main libxml2 amd64 2.7.8.dfsg-4 [892 kB] Get:42 http://localhost/debian/ sid/main html2text amd64 1.3.2a-15 [103 kB] Get:43 http://localhost/debian/ sid/main libcroco3 amd64 0.6.2-1 [125 kB] Get:44 http://localhost/debian/ sid/main libunistring0 amd64 0.9.3-4 [437 kB] Get:45 http://localhost/debian/ sid/main gettext amd64 0.18.1.1-4 [2079 kB] Get:46 http://localhost/debian/ sid/main intltool-debian all 0.35.0+20060710.1 [30.8 kB] Get:47 http://localhost/debian/ sid/main po-debconf all 1.0.16+nmu1 [223 kB] Get:48 http://localhost/debian/ sid/main debhelper all 8.9.6 [562 kB] Get:49 http://localhost/debian/ sid/main cdbs all 0.4.96 [75.8 kB] Get:50 http://localhost/debian/ sid/main dpatch all 2.0.32 [94.8 kB] Get:51 http://localhost/debian/ sid/main gfortran-4.6 amd64 4.6.1-10 [5558 kB] Get:52 http://localhost/debian/ sid/main gfortran amd64 4:4.6.1-2 [1124 B] Get:53 http://localhost/debian/ sid/main libblas3gf amd64 1.2.20110419-2 [292 kB] Get:54 http://localhost/debian/ sid/main libblas-dev amd64 1.2.20110419-2 [311 kB] Get:55 http://localhost/debian/ sid/main libbz2-dev amd64 1.0.5-7 [32.0 kB] Get:56 http://localhost/debian/ sid/main libjpeg62 amd64 6b1-2 [94.1 kB] Get:57 http://localhost/debian/ sid/main libjpeg8 amd64 8c-2 [132 kB] Get:58 http://localhost/debian/ sid/main libjpeg8-dev amd64 8c-2 [241 kB] Get:59 http://localhost/debian/ sid/main liblapack3gf amd64 3.3.1-1 [4437 kB] Get:60 http://localhost/debian/ sid/main liblapack-dev amd64 3.3.1-1 [4881 kB] Get:61 http://localhost/debian/ sid/main libncurses5-dev amd64 5.9-1 [507 kB] Get:62 http://localhost/debian/ sid/main libpaper1 amd64 1.1.24+nmu1 [21.8 kB] Get:63 http://localhost/debian/ sid/main libpaper-utils amd64 1.1.24+nmu1 [18.1 kB] Get:64 http://localhost/debian/ sid/main libpcre3-dev amd64 8.12-4 [307 kB] Get:65 http://localhost/debian/ sid/main zlib1g-dev amd64 1:1.2.3.4.dfsg-3 [192 kB] Get:66 http://localhost/debian/ sid/main libpng12-dev amd64 1.2.46-3 [265 kB] Get:67 http://localhost/debian/ sid/main libreadline6-dev amd64 6.2-4 [263 kB] Get:68 http://localhost/debian/ sid/main libreadline-dev amd64 6.2-4 [892 B] Get:69 http://localhost/debian/ sid/main libtiff4 amd64 3.9.5-1 [200 kB] Get:70 http://localhost/debian/ sid/main zip amd64 3.0-4 [334 kB] Get:71 http://localhost/debian/ sid/main unzip amd64 6.0-5 [192 kB] Get:72 http://localhost/debian/ sid/main xdg-utils all 1.1.0~rc1-2 [70.2 kB] Get:73 http://localhost/debian/ sid/main tcl8.5 amd64 8.5.10-1 [1621 kB] Get:74 http://localhost/debian/ sid/main tk8.5 amd64 8.5.10-1 [1181 kB] Get:75 http://localhost/debian/ sid/main r-base-core amd64 2.13.1-1 [15.2 MB] Get:76 http://localhost/debian/ sid/main r-base-dev all 2.13.1-1 [3490 B] Get:77 http://localhost/debian/ sid/main r-cran-lattice amd64 0.19-33-1 [707 kB] Get:78 http://localhost/debian/ sid/main r-cran-coda all 0.14-4-1 [202 kB] Get:79 http://localhost/debian/ sid/main r-cran-mass amd64 7.3-14-1 [831 kB] Extracting templates from packages: 37% Extracting templates from packages: 75% Extracting templates from packages: 100% Preconfiguring packages ... Fetched 55.0 MB in 0s (61.4 MB/s) Selecting previously deselected package libpipeline1. (Reading database ... 10801 files and directories currently installed.) Unpacking libpipeline1 (from .../libpipeline1_1.2.0-3_amd64.deb) ... Selecting previously deselected package libpcre3. Unpacking libpcre3 (from .../libpcre3_8.12-4_amd64.deb) ... Selecting previously deselected package libdatrie1. Unpacking libdatrie1 (from .../libdatrie1_0.2.4-3_amd64.deb) ... Selecting previously deselected package libexpat1. Unpacking libexpat1 (from .../libexpat1_2.0.1-7_amd64.deb) ... Selecting previously deselected package libfreetype6. Unpacking libfreetype6 (from .../libfreetype6_2.4.6-2_amd64.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu2_all.deb) ... Moving old data out of the way Selecting previously deselected package ttf-dejavu-core. Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ... Selecting previously deselected package fontconfig-config. Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3_all.deb) ... Selecting previously deselected package libfontconfig1. Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3_amd64.deb) ... Selecting previously deselected package libgfortran3. Unpacking libgfortran3 (from .../libgfortran3_4.6.1-10_amd64.deb) ... Selecting previously deselected package x11-common. Unpacking x11-common (from .../x11-common_1%3a7.6+8_all.deb) ... Selecting previously deselected package libice6. Unpacking libice6 (from .../libice6_2%3a1.0.7-2_amd64.deb) ... Selecting previously deselected package libpixman-1-0. Unpacking libpixman-1-0 (from .../libpixman-1-0_0.22.2-1_amd64.deb) ... Selecting previously deselected package libpng12-0. Unpacking libpng12-0 (from .../libpng12-0_1.2.46-3_amd64.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.6-3_amd64.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-3_amd64.deb) ... Selecting previously deselected package libxcb1. Unpacking libxcb1 (from .../libxcb1_1.7-3_amd64.deb) ... Selecting previously deselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-1_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-1_amd64.deb) ... Selecting previously deselected package libxcb-render0. Unpacking libxcb-render0 (from .../libxcb-render0_1.7-3_amd64.deb) ... Selecting previously deselected package libxcb-shm0. Unpacking libxcb-shm0 (from .../libxcb-shm0_1.7-3_amd64.deb) ... Selecting previously deselected package libxrender1. Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_amd64.deb) ... Selecting previously deselected package libcairo2. Unpacking libcairo2 (from .../libcairo2_1.10.2-6.1_amd64.deb) ... 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Unpacking tk8.5 (from .../tk8.5_8.5.10-1_amd64.deb) ... Selecting previously deselected package r-base-core. Unpacking r-base-core (from .../r-base-core_2.13.1-1_amd64.deb) ... Selecting previously deselected package r-base-dev. Unpacking r-base-dev (from .../r-base-dev_2.13.1-1_all.deb) ... Selecting previously deselected package r-cran-lattice. Unpacking r-cran-lattice (from .../r-cran-lattice_0.19-33-1_amd64.deb) ... Selecting previously deselected package r-cran-coda. Unpacking r-cran-coda (from .../r-cran-coda_0.14-4-1_all.deb) ... Selecting previously deselected package r-cran-mass. Unpacking r-cran-mass (from .../r-cran-mass_7.3-14-1_amd64.deb) ... Selecting previously deselected package sbuild-build-depends-mcmcpack-dummy. Unpacking sbuild-build-depends-mcmcpack-dummy (from .../sbuild-build-depends-mcmcpack-dummy.deb) ... Processing triggers for install-info ... Setting up libpipeline1 (1.2.0-3) ... Setting up libpcre3 (8.12-4) ... Setting up libdatrie1 (0.2.4-3) ... Setting up libexpat1 (2.0.1-7) ... Setting up libfreetype6 (2.4.6-2) ... Setting up ucf (3.0025+nmu2) ... Setting up ttf-dejavu-core (2.33-2) ... Setting up fontconfig-config (2.8.0-3) ... Setting up libfontconfig1 (2.8.0-3) ... Setting up libgfortran3 (4.6.1-10) ... Setting up x11-common (1:7.6+8) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6 (2:1.0.7-2) ... Setting up libpixman-1-0 (0.22.2-1) ... Setting up libpng12-0 (1.2.46-3) ... Setting up libxau6 (1:1.0.6-3) ... Setting up libxdmcp6 (1:1.1.0-3) ... Setting up libxcb1 (1.7-3) ... Setting up libx11-data (2:1.4.4-1) ... Setting up libx11-6 (2:1.4.4-1) ... Setting up libxcb-render0 (1.7-3) ... Setting up libxcb-shm0 (1.7-3) ... Setting up libxrender1 (1:0.9.6-2) ... Setting up libcairo2 (1.10.2-6.1) ... Setting up libglib2.0-0 (2.28.6-1) ... No schema files found: doing nothing. Setting up libthai-data (0.1.15-2) ... Setting up libthai0 (0.1.15-2) ... Setting up libxft2 (2.2.0-3) ... Setting up fontconfig (2.8.0-3) ... Cleaning up old fontconfig caches... done. Regenerating fonts cache... done. Setting up libpango1.0-0 (1.28.4-3) ... Setting up libpcrecpp0 (8.12-4) ... Setting up libsm6 (2:1.2.0-2) ... Setting up libxext6 (2:1.3.0-3) ... Setting up libxss1 (1:1.2.1-2) ... Setting up libxt6 (1:1.1.1-2) ... Setting up bsdmainutils (8.2.3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up groff-base (1.21-6) ... Setting up man-db (2.6.0.2-2) ... Building database of manual pages ... Setting up libmagic1 (5.08-1) ... Setting up file (5.08-1) ... Setting up gettext-base (0.18.1.1-4) ... Setting up libxml2 (2.7.8.dfsg-4) ... Setting up html2text (1.3.2a-15) ... Setting up libcroco3 (0.6.2-1) ... Setting up libunistring0 (0.9.3-4) ... Setting up gettext (0.18.1.1-4) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1) ... Setting up debhelper (8.9.6) ... Setting up cdbs (0.4.96) ... Setting up dpatch (2.0.32) ... Setting up gfortran-4.6 (4.6.1-10) ... Setting up gfortran (4:4.6.1-2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode. Setting up libblas3gf (1.2.20110419-2) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up libblas-dev (1.2.20110419-2) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode. Setting up libbz2-dev (1.0.5-7) ... Setting up libjpeg62 (6b1-2) ... Setting up libjpeg8 (8c-2) ... Setting up libjpeg8-dev (8c-2) ... Setting up liblapack3gf (3.3.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up liblapack-dev (3.3.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode. Setting up libncurses5-dev (5.9-1) ... Setting up libpaper1 (1.1.24+nmu1) ... Creating config file /etc/papersize with new version Setting up libpaper-utils (1.1.24+nmu1) ... Setting up libpcre3-dev (8.12-4) ... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ... Setting up libpng12-dev (1.2.46-3) ... Setting up libreadline6-dev (6.2-4) ... Setting up libreadline-dev (6.2-4) ... Setting up libtiff4 (3.9.5-1) ... Setting up zip (3.0-4) ... Setting up unzip (6.0-5) ... Setting up xdg-utils (1.1.0~rc1-2) ... Setting up tcl8.5 (8.5.10-1) ... update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode. Setting up tk8.5 (8.5.10-1) ... update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode. Setting up r-base-core (2.13.1-1) ... Setting R_PAPERSIZE_USER default to 'a4' Creating config file /etc/R/Renviron with new version Setting up r-base-dev (2.13.1-1) ... Setting up r-cran-lattice (0.19-33-1) ... Setting up r-cran-coda (0.14-4-1) ... Setting up r-cran-mass (7.3-14-1) ... Setting up sbuild-build-depends-mcmcpack-dummy (0.invalid.0) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 2.6.32-5-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.21.53.20110910-1 dpkg-dev_1.16.0.3 g++-4.6_4.6.1-10 gcc-4.6_4.6.1-10 libc6-dev_2.13-20 libstdc++6_4.6.1-10 libstdc++6-4.6-dev_4.6.1-10 linux-libc-dev_3.0.0-3 Package versions: apt_0.8.15.6 apt-utils_0.8.15.6 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binutils_2.21.53.20110910-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.5-7 cdbs_0.4.96 clang_2.9-11 coreutils_8.5-1 cpp_4:4.6.1-2 cpp-4.6_4.6.1-10 dash_0.5.7-1 debconf_1.5.41 debfoster_2.7-1.1 debhelper_8.9.6 debian-archive-keyring_2010.08.28 debianutils_4.0.2 diffutils_1:3.0-1 dpatch_2.0.32 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.42~WIP-2011-07-02-1 e2fsprogs_1.42~WIP-2011-07-02-1 fakeroot_1.18-1 file_5.08-1 findutils_4.4.2-1+b1 fontconfig_2.8.0-3 fontconfig-config_2.8.0-3 g++_4:4.6.1-2 g++-4.6_4.6.1-10 gcc_4:4.6.1-2 gcc-4.6_4.6.1-10 gcc-4.6-base_4.6.1-10 gettext_0.18.1.1-4 gettext-base_0.18.1.1-4 gfortran_4:4.6.1-2 gfortran-4.6_4.6.1-10 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-6 gzip_1.4-1 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.11 insserv_1.14.0-2.1 install-info_4.13a.dfsg.1-8 intltool-debian_0.35.0+20060710.1 less_444-1 libacl1_2.2.51-3 libattr1_1:2.4.46-3 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.19.1-5 libbz2-1.0_1.0.5-7 libbz2-dev_1.0.5-7 libc-bin_2.13-20 libc-dev-bin_2.13-20 libc6_2.13-20 libc6-dev_2.13-20 libcairo2_1.10.2-6.1 libcomerr2_1.42~WIP-2011-07-02-1 libcroco3_0.6.2-1 libdatrie1_0.2.4-3 libdb5.1_5.1.25-11 libdpkg-perl_1.16.0.3 libexpat1_2.0.1-7 libffi5_3.0.10~rc10-3 libfontconfig1_2.8.0-3 libfreetype6_2.4.6-2 libgc1c2_1:7.1-8 libgcc1_1:4.6.1-10 libgdbm3_1.8.3-10 libgfortran3_4.6.1-10 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.2+dfsg-1 libgomp1_4.6.1-10 libice6_2:1.0.7-2 libjpeg62_6b1-2 libjpeg8_8c-2 libjpeg8-dev_8c-2 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 libllvm2.9_2.9+dfsg-3 liblzma2_5.1.1alpha+20110809-2 libmagic1_5.08-1 libmount1_2.19.1-5 libmpc2_0.9-3 libmpfr4_3.0.1-6 libncurses5_5.9-1 libncurses5-dev_5.9-1 libncursesw5_5.9-1 libpam-modules_1.1.3-2 libpam-modules-bin_1.1.3-2 libpam-runtime_1.1.3-2 libpam0g_1.1.3-2 libpango1.0-0_1.28.4-3 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.0-3 libpixman-1-0_0.22.2-1 libpng12-0_1.2.46-3 libpng12-dev_1.2.46-3 libquadmath0_4.6.1-10 libreadline-dev_6.2-4 libreadline6_6.2-4 libreadline6-dev_6.2-4 libselinux1_2.1.0-1 libsepol1_2.1.0-1.1 libslang2_2.2.4-3 libsm6_2:1.2.0-2 libss2_1.42~WIP-2011-07-02-1 libstdc++6_4.6.1-10 libstdc++6-4.6-dev_4.6.1-10 libthai-data_0.1.15-2 libthai0_0.1.15-2 libtiff4_3.9.5-1 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-19 libuuid1_2.19.1-5 libx11-6_2:1.4.4-1 libx11-data_2:1.4.4-1 libxau6_1:1.0.6-3 libxcb-render0_1.7-3 libxcb-shm0_1.7-3 libxcb1_1.7-3 libxdmcp6_1:1.1.0-3 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-4 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.0.0-3 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-2 mawk_1.3.3-15 mount_2.19.1-5 multiarch-support_2.13-20 ncurses-base_5.9-1 ncurses-bin_5.9-1 nvi_1.81.6-8.2 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.12.4-4 perl-base_5.12.4-4 perl-modules_5.12.4-4 po-debconf_1.0.16+nmu1 r-base-core_2.13.1-1 r-base-dev_2.13.1-1 r-cran-coda_0.14-4-1 r-cran-lattice_0.19-33-1 r-cran-mass_7.3-14-1 readline-common_6.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-mcmcpack-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-13.11 sysvinit_2.88dsf-13.11 sysvinit-utils_2.88dsf-13.11 tar_1.26-2 tcl8.5_8.5.10-1 tk8.5_8.5.10-1 ttf-dejavu-core_2.33-2 tzdata_2011i-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.19.1-5 x11-common_1:7.6+8 xdg-utils_1.1.0~rc1-2 xz-utils_5.1.1alpha+20110809-2 zip_3.0-4 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/var/lib/sbuild/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Sun Jul 24 02:58:36 2011 CEST using DSA key ID A3D7B9BC gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./mcmcpack_1.1-1-1.dsc dpkg-source: info: extracting mcmcpack in mcmcpack-1.1-1 dpkg-source: info: unpacking mcmcpack_1.1-1.orig.tar.gz dpkg-source: info: unpacking mcmcpack_1.1-1-1.debian.tar.gz dpkg-source: info: applying debian-changes-1.0-5-1 Check disc space ──────────────── Sufficient free space for build dpkg-buildpackage ───────────────── dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: source package mcmcpack dpkg-buildpackage: source version 1.1-1-1 dpkg-source --before-build mcmcpack-1.1-1 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead test -x debian/rules dh_testroot /usr/bin/make -f debian/rules reverse-config /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead make[1]: Entering directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1' make[1]: Nothing to be done for `reverse-config'. make[1]: Leaving directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1' if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi patches: if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi if [ "reverse-patches" != "reverse-patches" ] ; then \ /usr/bin/make -f debian/rules update-config ; \ fi for dir in debian/patches ; do \ rm -f $dir/*.log ; \ done dh_clean if test -d src; then \ find src -regex ".*\..*o" | \ xargs --no-run-if-empty -r rm; \ fi rm -f config.log config.status dpkg-source -b mcmcpack-1.1-1 dpkg-source: info: using source format `3.0 (quilt)' dpkg-source: info: building mcmcpack using existing ./mcmcpack_1.1-1.orig.tar.gz dpkg-source: info: building mcmcpack in mcmcpack_1.1-1-1.debian.tar.gz dpkg-source: info: building mcmcpack in mcmcpack_1.1-1-1.dsc debian/rules build /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead test -x debian/rules mkdir -p "." /usr/bin/make -f debian/rules reverse-config /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead make[1]: Entering directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1' make[1]: Nothing to be done for `reverse-config'. make[1]: Leaving directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1' if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi patches: if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi if [ "debian/stamp-patched" != "reverse-patches" ] ; then \ /usr/bin/make -f debian/rules update-config ; \ fi /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead make[1]: Entering directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1' make[1]: Nothing to be done for `update-config'. make[1]: Leaving directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1' fakeroot debian/rules binary /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "." dh_installdirs usr/lib/R/site-library if test -f /usr/bin/xvfb-run; then \ xvfb-run -a \ R CMD INSTALL -l /build/mcmcpack-RSCGCj/mcmcpack-1.1-1/debian/r-cran-mcmcpack/usr/lib/R/site-library --clean \ . ; \ else \ R CMD INSTALL -l /build/mcmcpack-RSCGCj/mcmcpack-1.1-1/debian/r-cran-mcmcpack/usr/lib/R/site-library \ --clean . ;\ fi * installing *source* package 'MCMCpack' ... checking for C++ compiler default output file name... a.out checking whether the C++ compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking for trunc in -lm... yes checking for trunc... yes configure: creating ./config.status config.status: creating src/Makevars ** libs make[1]: Entering directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1/src' g++ -I/usr/share/R/include -DSCYTHE_COMPILE_DIRECT -DSCYTHE_DEBUG=0 -DHAVE_TRUNC -DHAVE_TRUNC -fpic -O3 -pipe -g -c MCMCSVDreg.cc -o MCMCSVDreg.o In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1279:11: error: use of undeclared identifier 'referenceNew' referenceNew(M.size()); ^ this-> In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:52: ./la.h:139:12: note: in instantiation of member function 'scythe::Matrix::Matrix' requested here return ones(rows, cols); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:305:9: note: must qualify identifier to find this declaration in dependent base class void referenceNew (uint size) ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1282:11: error: use of undeclared identifier 'referenceOther' referenceOther(M); ^ this-> In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:296:9: note: must qualify identifier to find this declaration in dependent base class void referenceOther (const DataBlockReference& ref, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1326:11: error: use of undeclared identifier 'referenceNew' referenceNew(M.size()); ^ ./matrix.h:2736:39: note: in instantiation of function template specialization 'scythe::Matrix::Matrix<0, 0>' requested here Matrix tmp(*this); ^ ./matrix.h:2777:5: note: in instantiation of member function 'scythe::Matrix::resize' requested here resize(M.rows(), M.cols(), preserve); ^ ./matrix.h:1962:11: note: in instantiation of function template specialization 'scythe::Matrix::resize2Match' requested here resize2Match(M); ^ MCMCSVDreg.cc:111:18: note: in instantiation of member function 'scythe::Matrix::operator=' requested here beta_store = Matrix(k, nstore); ^ MCMCSVDreg.cc:314:5: note: in instantiation of function template specialization 'MCMCSVDreg_impl' requested here MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ MCMCSVDreg.cc:314:28: note: instantiated from: MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:305:9: note: must qualify identifier to find this declaration in dependent base class void referenceNew (uint size) ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1329:11: error: use of undeclared identifier 'referenceOther' referenceOther(M); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:296:9: note: must qualify identifier to find this declaration in dependent base class void referenceOther (const DataBlockReference& ref, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1279:11: error: no member named 'referenceNew' in 'scythe::Matrix' referenceNew(M.size()); ^~~~~~~~~~~~ ./matrix.h:1810:12: note: in instantiation of member function 'scythe::Matrix::Matrix' requested here return (Matrix ^ MCMCSVDreg.cc:162:28: note: in instantiation of member function 'scythe::Matrix::operator()' requested here Matrix<> margmeanvec = FtD(_,i) * g0[i]; ^ MCMCSVDreg.cc:314:5: note: in instantiation of function template specialization 'MCMCSVDreg_impl' requested here MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ MCMCSVDreg.cc:314:28: note: instantiated from: MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1326:11: error: use of undeclared identifier 'referenceNew' referenceNew(M.size()); ^ ./matrix.h:2736:39: note: in instantiation of function template specialization 'scythe::Matrix::Matrix<0, 0>' requested here Matrix tmp(*this); ^ ./matrix.h:2777:5: note: in instantiation of member function 'scythe::Matrix::resize' requested here resize(M.rows(), M.cols(), preserve); ^ ./matrix.h:1962:11: note: in instantiation of function template specialization 'scythe::Matrix::resize2Match' requested here resize2Match(M); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:50: In file included from ./distributions.h:98: ./ide.h:467:18: note: in instantiation of member function 'scythe::Matrix::operator=' requested here perm_vec = Matrix(1, 1); // all 0s ^ ./ide.h:909:14: note: in instantiation of function template specialization 'scythe::::lu_decomp_alg<0, 0, double, 0, 0, 0>' requested here T sign = lu_decomp_alg(AA, L, U, perm_vec); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:50: ./distributions.h:2538:56: note: in instantiation of function template specialization 'scythe::det' requested here return ( (-k/2.0)*std::log(2*M_PI) -0.5 * std::log(det(Sigma)) ^ MCMCSVDreg.cc:172:20: note: in instantiation of function template specialization 'scythe::lndmvn<0, 0, 0, 0, 0, 0>' requested here double logfnot0 = lndmvn(residvec, margmeanvec, margVarmat); ^ MCMCSVDreg.cc:314:5: note: in instantiation of function template specialization 'MCMCSVDreg_impl' requested here MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ MCMCSVDreg.cc:314:28: note: instantiated from: MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:305:9: note: must qualify identifier to find this declaration in dependent base class void referenceNew (uint size) ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1329:11: error: use of undeclared identifier 'referenceOther' referenceOther(M); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:296:9: note: must qualify identifier to find this declaration in dependent base class void referenceOther (const DataBlockReference& ref, ^ 7 errors generated. make[1]: *** [MCMCSVDreg.o] Error 1 make[1]: Leaving directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1/src' make[1]: Entering directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1/src' make[1]: Leaving directory `/build/mcmcpack-RSCGCj/mcmcpack-1.1-1/src' ERROR: compilation failed for package 'MCMCpack' * removing '/build/mcmcpack-RSCGCj/mcmcpack-1.1-1/debian/r-cran-mcmcpack/usr/lib/R/site-library/MCMCpack' make: *** [R_any_arch] Error 1 dpkg-buildpackage: error: fakeroot debian/rules binary gave error exit status 2 ──────────────────────────────────────────────────────────────────────────────── Build finished at 20110911-1303 Finished ──────── E: Build failure (dpkg-buildpackage died) ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /var/lib/schroot/mount/lsid64c-2f0d3a81-56a3-4245-aefe-273f90aa6d6c/build/mcmcpack-RSCGCj Not cleaning session: cloned chroot in use ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Architecture: amd64 Build-Space: 2580 Build-Time: 7 Distribution: lsid64c Fail-Stage: build Install-Time: 10 Job: mcmcpack_1.1-1-1 Package: mcmcpack Package-Time: 31 Source-Version: 1.1-1-1 Space: 2580 Status: attempted Version: 1.1-1-1 ──────────────────────────────────────────────────────────────────────────────── Finished at 20110911-1303 Build needed 00:00:31, 2580k disc space DC-Message: Failed, but took only 32.096854. Retrying, you never know. Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. sbuild (Debian sbuild) 0.62.2 (05 Apr 2011) on talc-104.nancy.grid5000.fr ╔══════════════════════════════════════════════════════════════════════════════╗ ║ mcmcpack 1.1-1-1 (amd64) 11 Sep 2011 13:32 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: mcmcpack Version: 1.1-1-1 Source Version: 1.1-1-1 Distribution: lsid64c Architecture: amd64 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Ign http://localhost sid InRelease Hit http://localhost sid Release.gpg Hit http://localhost sid Release Ign http://localhost sid/main Sources/DiffIndex Ign http://localhost sid/main amd64 Packages/DiffIndex Ign http://localhost sid/main TranslationIndex Hit http://localhost sid/main Sources Hit http://localhost sid/main amd64 Packages Ign http://localhost sid/main Translation-en Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: binutils cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-bin libc-dev-bin libc6 libc6-dev libgcc1 libgomp1 libquadmath0 libstdc++6 libstdc++6-4.6-dev multiarch-support 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 34.4 MB of archives. After this operation, 1073 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libc6-dev libc-dev-bin libgomp1 gcc-4.6-base libgcc1 cpp-4.6 libquadmath0 libstdc++6-4.6-dev g++-4.6 gcc-4.6 libstdc++6 binutils libc-bin libc6 multiarch-support Authentication warning overridden. Get:1 http://localhost/debian/ sid/main libc6-dev amd64 2.13-20 [2637 kB] Get:2 http://localhost/debian/ sid/main libc-dev-bin amd64 2.13-20 [217 kB] Get:3 http://localhost/debian/ sid/main libgomp1 amd64 4.6.1-10 [25.7 kB] Get:4 http://localhost/debian/ sid/main gcc-4.6-base amd64 4.6.1-10 [135 kB] Get:5 http://localhost/debian/ sid/main libgcc1 amd64 1:4.6.1-10 [42.9 kB] Get:6 http://localhost/debian/ sid/main cpp-4.6 amd64 4.6.1-10 [4816 kB] Get:7 http://localhost/debian/ sid/main libquadmath0 amd64 4.6.1-10 [126 kB] Get:8 http://localhost/debian/ sid/main libstdc++6-4.6-dev amd64 4.6.1-10 [1660 kB] Get:9 http://localhost/debian/ sid/main g++-4.6 amd64 4.6.1-10 [6952 kB] Get:10 http://localhost/debian/ sid/main gcc-4.6 amd64 4.6.1-10 [7303 kB] Get:11 http://localhost/debian/ sid/main libstdc++6 amd64 4.6.1-10 [337 kB] Get:12 http://localhost/debian/ sid/main binutils amd64 2.21.53.20110910-1 [4844 kB] Get:13 http://localhost/debian/ sid/main libc-bin amd64 2.13-20 [819 kB] Get:14 http://localhost/debian/ sid/main libc6 amd64 2.13-20 [4323 kB] Get:15 http://localhost/debian/ sid/main multiarch-support amd64 2.13-20 [141 kB] Preconfiguring packages ... Fetched 34.4 MB in 33s (1021 kB/s) (Reading database ... 10788 files and directories currently installed.) Preparing to replace libc6-dev 2.13-18 (using .../libc6-dev_2.13-20_amd64.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-dev-bin 2.13-18 (using .../libc-dev-bin_2.13-20_amd64.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libgomp1 4.6.1-9 (using .../libgomp1_4.6.1-10_amd64.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.6-base 4.6.1-9 (using .../gcc-4.6-base_4.6.1-10_amd64.deb) ... Unpacking replacement gcc-4.6-base ... Setting up gcc-4.6-base (4.6.1-10) ... (Reading database ... 10788 files and directories currently installed.) Preparing to replace libgcc1 1:4.6.1-9 (using .../libgcc1_1%3a4.6.1-10_amd64.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.6.1-10) ... (Reading database ... 10788 files and directories currently installed.) Preparing to replace cpp-4.6 4.6.1-9 (using .../cpp-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement cpp-4.6 ... Preparing to replace libquadmath0 4.6.1-9 (using .../libquadmath0_4.6.1-10_amd64.deb) ... Unpacking replacement libquadmath0 ... Preparing to replace libstdc++6-4.6-dev 4.6.1-9 (using .../libstdc++6-4.6-dev_4.6.1-10_amd64.deb) ... Unpacking replacement libstdc++6-4.6-dev ... Preparing to replace g++-4.6 4.6.1-9 (using .../g++-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement g++-4.6 ... Preparing to replace gcc-4.6 4.6.1-9 (using .../gcc-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement gcc-4.6 ... Preparing to replace libstdc++6 4.6.1-9 (using .../libstdc++6_4.6.1-10_amd64.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.6.1-10) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace binutils 2.21.53.20110823-3 (using .../binutils_2.21.53.20110910-1_amd64.deb) ... Unpacking replacement binutils ... Preparing to replace libc-bin 2.13-18 (using .../libc-bin_2.13-20_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-20) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace libc6 2.13-18 (using .../libc6_2.13-20_amd64.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.13-20) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace multiarch-support 2.13-18 (using .../multiarch-support_2.13-20_amd64.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.13-20) ... Setting up libc-dev-bin (2.13-20) ... Setting up libc6-dev (2.13-20) ... Setting up libgomp1 (4.6.1-10) ... Setting up cpp-4.6 (4.6.1-10) ... Setting up libquadmath0 (4.6.1-10) ... Setting up binutils (2.21.53.20110910-1) ... Setting up gcc-4.6 (4.6.1-10) ... Setting up libstdc++6-4.6-dev (4.6.1-10) ... Setting up g++-4.6 (4.6.1-10) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... Need to get 460 kB of source archives. Get:1 http://localhost/debian/ sid/main mcmcpack 1.1-1-1 (dsc) [1091 B] Get:2 http://localhost/debian/ sid/main mcmcpack 1.1-1-1 (tar) [453 kB] Get:3 http://localhost/debian/ sid/main mcmcpack 1.1-1-1 (diff) [5408 B] Fetched 460 kB in 1s (358 kB/s) Download complete and in download only mode Check arch ────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/build/mcmcpack-9K2zrb/resolver-e609mn/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/700 B of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! sbuild-build-depends-core-dummy Authentication warning overridden. Selecting previously deselected package sbuild-build-depends-core-dummy. (Reading database ... 10801 files and directories currently installed.) Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Cannot open /var/lib/schroot/mount/lsid64c-5ee3d9bf-5b82-416b-a90b-2db6d336b178/etc/lsb-release: No such file or directory Merged Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>> 7), r-base-dev (>= 2.10.0), r-cran-coda (>= 0.11-3), r-cran-mass, cdbs Filtered Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>> 7), r-base-dev (>= 2.10.0), r-cran-coda (>= 0.11-3), r-cran-mass, cdbs dpkg-deb: building package `sbuild-build-depends-mcmcpack-dummy' in `/build/mcmcpack-9K2zrb/resolver-lG_ZqB/apt_archive/sbuild-build-depends-mcmcpack-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install mcmcpack build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg62 libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core r-base-dev r-cran-coda r-cran-lattice r-cran-mass tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev Suggested packages: wamerican wordlist whois vacation devscripts dh-make curl defoma gettext-doc gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp www-browser libmail-box-perl ess r-doc-info r-doc-pdf r-mathlib r-base-html r-cran-mcmcpack tclreadline gvfs-bin Recommended packages: autotools-dev patchutils autopoint libglib2.0-data shared-mime-info x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl x11-utils x11-xserver-utils The following NEW packages will be installed: bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg62 libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core r-base-dev r-cran-coda r-cran-lattice r-cran-mass sbuild-build-depends-mcmcpack-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev 0 upgraded, 80 newly installed, 0 to remove and 0 not upgraded. Need to get 55.0 MB/55.0 MB of archives. After this operation, 134 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpipeline1 libpcre3 libdatrie1 libexpat1 libfreetype6 ucf ttf-dejavu-core fontconfig-config libfontconfig1 libgfortran3 x11-common libice6 libpixman-1-0 libpng12-0 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxcb-render0 libxcb-shm0 libxrender1 libcairo2 libglib2.0-0 libthai-data libthai0 libxft2 fontconfig libpango1.0-0 libpcrecpp0 libsm6 libxext6 libxss1 libxt6 bsdmainutils groff-base man-db libmagic1 file gettext-base libxml2 html2text libcroco3 libunistring0 gettext intltool-debian po-debconf debhelper cdbs dpatch gfortran-4.6 gfortran libblas3gf libblas-dev libbz2-dev libjpeg62 libjpeg8 libjpeg8-dev liblapack3gf liblapack-dev libncurses5-dev libpaper1 libpaper-utils libpcre3-dev zlib1g-dev libpng12-dev libreadline6-dev libreadline-dev libtiff4 zip unzip xdg-utils tcl8.5 tk8.5 r-base-core r-base-dev r-cran-lattice r-cran-coda r-cran-mass sbuild-build-depends-mcmcpack-dummy Authentication warning overridden. Get:1 http://localhost/debian/ sid/main libpipeline1 amd64 1.2.0-3 [37.9 kB] Get:2 http://localhost/debian/ sid/main libpcre3 amd64 8.12-4 [225 kB] Get:3 http://localhost/debian/ sid/main libdatrie1 amd64 0.2.4-3 [27.6 kB] Get:4 http://localhost/debian/ sid/main libexpat1 amd64 2.0.1-7 [137 kB] Get:5 http://localhost/debian/ sid/main libfreetype6 amd64 2.4.6-2 [435 kB] Get:6 http://localhost/debian/ sid/main ucf all 3.0025+nmu2 [70.6 kB] Get:7 http://localhost/debian/ sid/main ttf-dejavu-core all 2.33-2 [1552 kB] Get:8 http://localhost/debian/ sid/main fontconfig-config all 2.8.0-3 [221 kB] Get:9 http://localhost/debian/ sid/main libfontconfig1 amd64 2.8.0-3 [282 kB] Get:10 http://localhost/debian/ sid/main libgfortran3 amd64 4.6.1-10 [358 kB] Get:11 http://localhost/debian/ sid/main x11-common all 1:7.6+8 [276 kB] Get:12 http://localhost/debian/ sid/main libice6 amd64 2:1.0.7-2 [56.5 kB] Get:13 http://localhost/debian/ sid/main libpixman-1-0 amd64 0.22.2-1 [356 kB] Get:14 http://localhost/debian/ sid/main libpng12-0 amd64 1.2.46-3 [188 kB] Get:15 http://localhost/debian/ sid/main libxau6 amd64 1:1.0.6-3 [17.0 kB] Get:16 http://localhost/debian/ sid/main libxdmcp6 amd64 1:1.1.0-3 [22.9 kB] Get:17 http://localhost/debian/ sid/main libxcb1 amd64 1.7-3 [45.4 kB] Get:18 http://localhost/debian/ sid/main libx11-data all 2:1.4.4-1 [183 kB] Get:19 http://localhost/debian/ sid/main libx11-6 amd64 2:1.4.4-1 [889 kB] Get:20 http://localhost/debian/ sid/main libxcb-render0 amd64 1.7-3 [16.3 kB] Get:21 http://localhost/debian/ sid/main libxcb-shm0 amd64 1.7-3 [9458 B] Get:22 http://localhost/debian/ sid/main libxrender1 amd64 1:0.9.6-2 [31.5 kB] Get:23 http://localhost/debian/ sid/main libcairo2 amd64 1.10.2-6.1 [948 kB] Get:24 http://localhost/debian/ sid/main libglib2.0-0 amd64 2.28.6-1 [1648 kB] Get:25 http://localhost/debian/ sid/main libthai-data all 0.1.15-2 [201 kB] Get:26 http://localhost/debian/ sid/main libthai0 amd64 0.1.15-2 [42.9 kB] Get:27 http://localhost/debian/ sid/main libxft2 amd64 2.2.0-3 [58.1 kB] Get:28 http://localhost/debian/ sid/main fontconfig amd64 2.8.0-3 [334 kB] Get:29 http://localhost/debian/ sid/main libpango1.0-0 amd64 1.28.4-3 [442 kB] Get:30 http://localhost/debian/ sid/main libpcrecpp0 amd64 8.12-4 [113 kB] Get:31 http://localhost/debian/ sid/main libsm6 amd64 2:1.2.0-2 [29.8 kB] Get:32 http://localhost/debian/ sid/main libxext6 amd64 2:1.3.0-3 [52.3 kB] Get:33 http://localhost/debian/ sid/main libxss1 amd64 1:1.2.1-2 [16.9 kB] Get:34 http://localhost/debian/ sid/main libxt6 amd64 1:1.1.1-2 [207 kB] Get:35 http://localhost/debian/ sid/main bsdmainutils amd64 8.2.3 [208 kB] Get:36 http://localhost/debian/ sid/main groff-base amd64 1.21-6 [1150 kB] Get:37 http://localhost/debian/ sid/main man-db amd64 2.6.0.2-2 [1023 kB] Get:38 http://localhost/debian/ sid/main libmagic1 amd64 5.08-1 [246 kB] Get:39 http://localhost/debian/ sid/main file amd64 5.08-1 [51.7 kB] Get:40 http://localhost/debian/ sid/main gettext-base amd64 0.18.1.1-4 [154 kB] Get:41 http://localhost/debian/ sid/main libxml2 amd64 2.7.8.dfsg-4 [892 kB] Get:42 http://localhost/debian/ sid/main html2text amd64 1.3.2a-15 [103 kB] Get:43 http://localhost/debian/ sid/main libcroco3 amd64 0.6.2-1 [125 kB] Get:44 http://localhost/debian/ sid/main libunistring0 amd64 0.9.3-4 [437 kB] Get:45 http://localhost/debian/ sid/main gettext amd64 0.18.1.1-4 [2079 kB] Get:46 http://localhost/debian/ sid/main intltool-debian all 0.35.0+20060710.1 [30.8 kB] Get:47 http://localhost/debian/ sid/main po-debconf all 1.0.16+nmu1 [223 kB] Get:48 http://localhost/debian/ sid/main debhelper all 8.9.6 [562 kB] Get:49 http://localhost/debian/ sid/main cdbs all 0.4.96 [75.8 kB] Get:50 http://localhost/debian/ sid/main dpatch all 2.0.32 [94.8 kB] Get:51 http://localhost/debian/ sid/main gfortran-4.6 amd64 4.6.1-10 [5558 kB] Get:52 http://localhost/debian/ sid/main gfortran amd64 4:4.6.1-2 [1124 B] Get:53 http://localhost/debian/ sid/main libblas3gf amd64 1.2.20110419-2 [292 kB] Get:54 http://localhost/debian/ sid/main libblas-dev amd64 1.2.20110419-2 [311 kB] Get:55 http://localhost/debian/ sid/main libbz2-dev amd64 1.0.5-7 [32.0 kB] Get:56 http://localhost/debian/ sid/main libjpeg62 amd64 6b1-2 [94.1 kB] Get:57 http://localhost/debian/ sid/main libjpeg8 amd64 8c-2 [132 kB] Get:58 http://localhost/debian/ sid/main libjpeg8-dev amd64 8c-2 [241 kB] Get:59 http://localhost/debian/ sid/main liblapack3gf amd64 3.3.1-1 [4437 kB] Get:60 http://localhost/debian/ sid/main liblapack-dev amd64 3.3.1-1 [4881 kB] Get:61 http://localhost/debian/ sid/main libncurses5-dev amd64 5.9-1 [507 kB] Get:62 http://localhost/debian/ sid/main libpaper1 amd64 1.1.24+nmu1 [21.8 kB] Get:63 http://localhost/debian/ sid/main libpaper-utils amd64 1.1.24+nmu1 [18.1 kB] Get:64 http://localhost/debian/ sid/main libpcre3-dev amd64 8.12-4 [307 kB] Get:65 http://localhost/debian/ sid/main zlib1g-dev amd64 1:1.2.3.4.dfsg-3 [192 kB] Get:66 http://localhost/debian/ sid/main libpng12-dev amd64 1.2.46-3 [265 kB] Get:67 http://localhost/debian/ sid/main libreadline6-dev amd64 6.2-4 [263 kB] Get:68 http://localhost/debian/ sid/main libreadline-dev amd64 6.2-4 [892 B] Get:69 http://localhost/debian/ sid/main libtiff4 amd64 3.9.5-1 [200 kB] Get:70 http://localhost/debian/ sid/main zip amd64 3.0-4 [334 kB] Get:71 http://localhost/debian/ sid/main unzip amd64 6.0-5 [192 kB] Get:72 http://localhost/debian/ sid/main xdg-utils all 1.1.0~rc1-2 [70.2 kB] Get:73 http://localhost/debian/ sid/main tcl8.5 amd64 8.5.10-1 [1621 kB] Get:74 http://localhost/debian/ sid/main tk8.5 amd64 8.5.10-1 [1181 kB] Get:75 http://localhost/debian/ sid/main r-base-core amd64 2.13.1-1 [15.2 MB] Get:76 http://localhost/debian/ sid/main r-base-dev all 2.13.1-1 [3490 B] Get:77 http://localhost/debian/ sid/main r-cran-lattice amd64 0.19-33-1 [707 kB] Get:78 http://localhost/debian/ sid/main r-cran-coda all 0.14-4-1 [202 kB] Get:79 http://localhost/debian/ sid/main r-cran-mass amd64 7.3-14-1 [831 kB] Extracting templates from packages: 37% Extracting templates from packages: 75% Extracting templates from packages: 100% Preconfiguring packages ... Fetched 55.0 MB in 1min 22s (666 kB/s) Selecting previously deselected package libpipeline1. (Reading database ... 10801 files and directories currently installed.) Unpacking libpipeline1 (from .../libpipeline1_1.2.0-3_amd64.deb) ... Selecting previously deselected package libpcre3. Unpacking libpcre3 (from .../libpcre3_8.12-4_amd64.deb) ... Selecting previously deselected package libdatrie1. Unpacking libdatrie1 (from .../libdatrie1_0.2.4-3_amd64.deb) ... Selecting previously deselected package libexpat1. Unpacking libexpat1 (from .../libexpat1_2.0.1-7_amd64.deb) ... Selecting previously deselected package libfreetype6. Unpacking libfreetype6 (from .../libfreetype6_2.4.6-2_amd64.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu2_all.deb) ... Moving old data out of the way Selecting previously deselected package ttf-dejavu-core. Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ... 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Selecting previously deselected package libglib2.0-0. Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_amd64.deb) ... Selecting previously deselected package libthai-data. Unpacking libthai-data (from .../libthai-data_0.1.15-2_all.deb) ... Selecting previously deselected package libthai0. Unpacking libthai0 (from .../libthai0_0.1.15-2_amd64.deb) ... Selecting previously deselected package libxft2. Unpacking libxft2 (from .../libxft2_2.2.0-3_amd64.deb) ... Selecting previously deselected package fontconfig. Unpacking fontconfig (from .../fontconfig_2.8.0-3_amd64.deb) ... Selecting previously deselected package libpango1.0-0. Unpacking libpango1.0-0 (from .../libpango1.0-0_1.28.4-3_amd64.deb) ... Selecting previously deselected package libpcrecpp0. Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_amd64.deb) ... Selecting previously deselected package libsm6. Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_amd64.deb) ... Selecting previously deselected package libxext6. 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Selecting previously deselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-4_amd64.deb) ... Selecting previously deselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-15_amd64.deb) ... Selecting previously deselected package libcroco3. Unpacking libcroco3 (from .../libcroco3_0.6.2-1_amd64.deb) ... Selecting previously deselected package libunistring0. Unpacking libunistring0 (from .../libunistring0_0.9.3-4_amd64.deb) ... Selecting previously deselected package gettext. Unpacking gettext (from .../gettext_0.18.1.1-4_amd64.deb) ... Selecting previously deselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously deselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ... Selecting previously deselected package debhelper. Unpacking debhelper (from .../debhelper_8.9.6_all.deb) ... Selecting previously deselected package cdbs. 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Selecting previously deselected package libjpeg8-dev. Unpacking libjpeg8-dev (from .../libjpeg8-dev_8c-2_amd64.deb) ... Selecting previously deselected package liblapack3gf. Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_amd64.deb) ... Selecting previously deselected package liblapack-dev. Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_amd64.deb) ... Selecting previously deselected package libncurses5-dev. Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-1_amd64.deb) ... Selecting previously deselected package libpaper1. Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_amd64.deb) ... Selecting previously deselected package libpaper-utils. Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_amd64.deb) ... Selecting previously deselected package libpcre3-dev. Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_amd64.deb) ... Selecting previously deselected package zlib1g-dev. Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_amd64.deb) ... Selecting previously deselected package libpng12-dev. Unpacking libpng12-dev (from .../libpng12-dev_1.2.46-3_amd64.deb) ... Selecting previously deselected package libreadline6-dev. Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-4_amd64.deb) ... Selecting previously deselected package libreadline-dev. Unpacking libreadline-dev (from .../libreadline-dev_6.2-4_amd64.deb) ... Selecting previously deselected package libtiff4. Unpacking libtiff4 (from .../libtiff4_3.9.5-1_amd64.deb) ... Selecting previously deselected package zip. Unpacking zip (from .../archives/zip_3.0-4_amd64.deb) ... Selecting previously deselected package unzip. Unpacking unzip (from .../archives/unzip_6.0-5_amd64.deb) ... Selecting previously deselected package xdg-utils. Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1-2_all.deb) ... Selecting previously deselected package tcl8.5. Unpacking tcl8.5 (from .../tcl8.5_8.5.10-1_amd64.deb) ... Selecting previously deselected package tk8.5. Unpacking tk8.5 (from .../tk8.5_8.5.10-1_amd64.deb) ... Selecting previously deselected package r-base-core. Unpacking r-base-core (from .../r-base-core_2.13.1-1_amd64.deb) ... Selecting previously deselected package r-base-dev. Unpacking r-base-dev (from .../r-base-dev_2.13.1-1_all.deb) ... Selecting previously deselected package r-cran-lattice. Unpacking r-cran-lattice (from .../r-cran-lattice_0.19-33-1_amd64.deb) ... Selecting previously deselected package r-cran-coda. Unpacking r-cran-coda (from .../r-cran-coda_0.14-4-1_all.deb) ... Selecting previously deselected package r-cran-mass. Unpacking r-cran-mass (from .../r-cran-mass_7.3-14-1_amd64.deb) ... Selecting previously deselected package sbuild-build-depends-mcmcpack-dummy. Unpacking sbuild-build-depends-mcmcpack-dummy (from .../sbuild-build-depends-mcmcpack-dummy.deb) ... Processing triggers for install-info ... Setting up libpipeline1 (1.2.0-3) ... Setting up libpcre3 (8.12-4) ... Setting up libdatrie1 (0.2.4-3) ... Setting up libexpat1 (2.0.1-7) ... Setting up libfreetype6 (2.4.6-2) ... Setting up ucf (3.0025+nmu2) ... Setting up ttf-dejavu-core (2.33-2) ... Setting up fontconfig-config (2.8.0-3) ... Setting up libfontconfig1 (2.8.0-3) ... Setting up libgfortran3 (4.6.1-10) ... Setting up x11-common (1:7.6+8) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6 (2:1.0.7-2) ... Setting up libpixman-1-0 (0.22.2-1) ... Setting up libpng12-0 (1.2.46-3) ... Setting up libxau6 (1:1.0.6-3) ... Setting up libxdmcp6 (1:1.1.0-3) ... Setting up libxcb1 (1.7-3) ... Setting up libx11-data (2:1.4.4-1) ... Setting up libx11-6 (2:1.4.4-1) ... Setting up libxcb-render0 (1.7-3) ... Setting up libxcb-shm0 (1.7-3) ... Setting up libxrender1 (1:0.9.6-2) ... Setting up libcairo2 (1.10.2-6.1) ... Setting up libglib2.0-0 (2.28.6-1) ... No schema files found: doing nothing. Setting up libthai-data (0.1.15-2) ... Setting up libthai0 (0.1.15-2) ... Setting up libxft2 (2.2.0-3) ... Setting up fontconfig (2.8.0-3) ... Cleaning up old fontconfig caches... done. Regenerating fonts cache... done. Setting up libpango1.0-0 (1.28.4-3) ... Setting up libpcrecpp0 (8.12-4) ... Setting up libsm6 (2:1.2.0-2) ... Setting up libxext6 (2:1.3.0-3) ... Setting up libxss1 (1:1.2.1-2) ... Setting up libxt6 (1:1.1.1-2) ... Setting up bsdmainutils (8.2.3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up groff-base (1.21-6) ... Setting up man-db (2.6.0.2-2) ... Building database of manual pages ... Setting up libmagic1 (5.08-1) ... Setting up file (5.08-1) ... Setting up gettext-base (0.18.1.1-4) ... Setting up libxml2 (2.7.8.dfsg-4) ... Setting up html2text (1.3.2a-15) ... Setting up libcroco3 (0.6.2-1) ... Setting up libunistring0 (0.9.3-4) ... Setting up gettext (0.18.1.1-4) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1) ... Setting up debhelper (8.9.6) ... Setting up cdbs (0.4.96) ... Setting up dpatch (2.0.32) ... Setting up gfortran-4.6 (4.6.1-10) ... Setting up gfortran (4:4.6.1-2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode. Setting up libblas3gf (1.2.20110419-2) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up libblas-dev (1.2.20110419-2) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode. Setting up libbz2-dev (1.0.5-7) ... Setting up libjpeg62 (6b1-2) ... Setting up libjpeg8 (8c-2) ... Setting up libjpeg8-dev (8c-2) ... Setting up liblapack3gf (3.3.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up liblapack-dev (3.3.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode. Setting up libncurses5-dev (5.9-1) ... Setting up libpaper1 (1.1.24+nmu1) ... Creating config file /etc/papersize with new version Setting up libpaper-utils (1.1.24+nmu1) ... Setting up libpcre3-dev (8.12-4) ... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ... Setting up libpng12-dev (1.2.46-3) ... Setting up libreadline6-dev (6.2-4) ... Setting up libreadline-dev (6.2-4) ... Setting up libtiff4 (3.9.5-1) ... Setting up zip (3.0-4) ... Setting up unzip (6.0-5) ... Setting up xdg-utils (1.1.0~rc1-2) ... Setting up tcl8.5 (8.5.10-1) ... update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode. Setting up tk8.5 (8.5.10-1) ... update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode. Setting up r-base-core (2.13.1-1) ... Setting R_PAPERSIZE_USER default to 'a4' Creating config file /etc/R/Renviron with new version Setting up r-base-dev (2.13.1-1) ... Setting up r-cran-lattice (0.19-33-1) ... Setting up r-cran-coda (0.14-4-1) ... Setting up r-cran-mass (7.3-14-1) ... Setting up sbuild-build-depends-mcmcpack-dummy (0.invalid.0) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 2.6.32-5-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.21.53.20110910-1 dpkg-dev_1.16.0.3 g++-4.6_4.6.1-10 gcc-4.6_4.6.1-10 libc6-dev_2.13-20 libstdc++6_4.6.1-10 libstdc++6-4.6-dev_4.6.1-10 linux-libc-dev_3.0.0-3 Package versions: apt_0.8.15.6 apt-utils_0.8.15.6 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binutils_2.21.53.20110910-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.5-7 cdbs_0.4.96 clang_2.9-11 coreutils_8.5-1 cpp_4:4.6.1-2 cpp-4.6_4.6.1-10 dash_0.5.7-1 debconf_1.5.41 debfoster_2.7-1.1 debhelper_8.9.6 debian-archive-keyring_2010.08.28 debianutils_4.0.2 diffutils_1:3.0-1 dpatch_2.0.32 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.42~WIP-2011-07-02-1 e2fsprogs_1.42~WIP-2011-07-02-1 fakeroot_1.18-1 file_5.08-1 findutils_4.4.2-1+b1 fontconfig_2.8.0-3 fontconfig-config_2.8.0-3 g++_4:4.6.1-2 g++-4.6_4.6.1-10 gcc_4:4.6.1-2 gcc-4.6_4.6.1-10 gcc-4.6-base_4.6.1-10 gettext_0.18.1.1-4 gettext-base_0.18.1.1-4 gfortran_4:4.6.1-2 gfortran-4.6_4.6.1-10 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-6 gzip_1.4-1 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.11 insserv_1.14.0-2.1 install-info_4.13a.dfsg.1-8 intltool-debian_0.35.0+20060710.1 less_444-1 libacl1_2.2.51-3 libattr1_1:2.4.46-3 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.19.1-5 libbz2-1.0_1.0.5-7 libbz2-dev_1.0.5-7 libc-bin_2.13-20 libc-dev-bin_2.13-20 libc6_2.13-20 libc6-dev_2.13-20 libcairo2_1.10.2-6.1 libcomerr2_1.42~WIP-2011-07-02-1 libcroco3_0.6.2-1 libdatrie1_0.2.4-3 libdb5.1_5.1.25-11 libdpkg-perl_1.16.0.3 libexpat1_2.0.1-7 libffi5_3.0.10~rc10-3 libfontconfig1_2.8.0-3 libfreetype6_2.4.6-2 libgc1c2_1:7.1-8 libgcc1_1:4.6.1-10 libgdbm3_1.8.3-10 libgfortran3_4.6.1-10 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.2+dfsg-1 libgomp1_4.6.1-10 libice6_2:1.0.7-2 libjpeg62_6b1-2 libjpeg8_8c-2 libjpeg8-dev_8c-2 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 libllvm2.9_2.9+dfsg-3 liblzma2_5.1.1alpha+20110809-2 libmagic1_5.08-1 libmount1_2.19.1-5 libmpc2_0.9-3 libmpfr4_3.0.1-6 libncurses5_5.9-1 libncurses5-dev_5.9-1 libncursesw5_5.9-1 libpam-modules_1.1.3-2 libpam-modules-bin_1.1.3-2 libpam-runtime_1.1.3-2 libpam0g_1.1.3-2 libpango1.0-0_1.28.4-3 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.0-3 libpixman-1-0_0.22.2-1 libpng12-0_1.2.46-3 libpng12-dev_1.2.46-3 libquadmath0_4.6.1-10 libreadline-dev_6.2-4 libreadline6_6.2-4 libreadline6-dev_6.2-4 libselinux1_2.1.0-1 libsepol1_2.1.0-1.1 libslang2_2.2.4-3 libsm6_2:1.2.0-2 libss2_1.42~WIP-2011-07-02-1 libstdc++6_4.6.1-10 libstdc++6-4.6-dev_4.6.1-10 libthai-data_0.1.15-2 libthai0_0.1.15-2 libtiff4_3.9.5-1 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-19 libuuid1_2.19.1-5 libx11-6_2:1.4.4-1 libx11-data_2:1.4.4-1 libxau6_1:1.0.6-3 libxcb-render0_1.7-3 libxcb-shm0_1.7-3 libxcb1_1.7-3 libxdmcp6_1:1.1.0-3 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-4 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.0.0-3 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-2 mawk_1.3.3-15 mount_2.19.1-5 multiarch-support_2.13-20 ncurses-base_5.9-1 ncurses-bin_5.9-1 nvi_1.81.6-8.2 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.12.4-4 perl-base_5.12.4-4 perl-modules_5.12.4-4 po-debconf_1.0.16+nmu1 r-base-core_2.13.1-1 r-base-dev_2.13.1-1 r-cran-coda_0.14-4-1 r-cran-lattice_0.19-33-1 r-cran-mass_7.3-14-1 readline-common_6.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-mcmcpack-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-13.11 sysvinit_2.88dsf-13.11 sysvinit-utils_2.88dsf-13.11 tar_1.26-2 tcl8.5_8.5.10-1 tk8.5_8.5.10-1 ttf-dejavu-core_2.33-2 tzdata_2011i-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.19.1-5 x11-common_1:7.6+8 xdg-utils_1.1.0~rc1-2 xz-utils_5.1.1alpha+20110809-2 zip_3.0-4 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/var/lib/sbuild/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Sun Jul 24 02:58:36 2011 CEST using DSA key ID A3D7B9BC gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./mcmcpack_1.1-1-1.dsc dpkg-source: info: extracting mcmcpack in mcmcpack-1.1-1 dpkg-source: info: unpacking mcmcpack_1.1-1.orig.tar.gz dpkg-source: info: unpacking mcmcpack_1.1-1-1.debian.tar.gz dpkg-source: info: applying debian-changes-1.0-5-1 Check disc space ──────────────── Sufficient free space for build dpkg-buildpackage ───────────────── dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: source package mcmcpack dpkg-buildpackage: source version 1.1-1-1 dpkg-source --before-build mcmcpack-1.1-1 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead test -x debian/rules dh_testroot /usr/bin/make -f debian/rules reverse-config /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead make[1]: Entering directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1' make[1]: Nothing to be done for `reverse-config'. make[1]: Leaving directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1' if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi patches: if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi if [ "reverse-patches" != "reverse-patches" ] ; then \ /usr/bin/make -f debian/rules update-config ; \ fi for dir in debian/patches ; do \ rm -f $dir/*.log ; \ done dh_clean if test -d src; then \ find src -regex ".*\..*o" | \ xargs --no-run-if-empty -r rm; \ fi rm -f config.log config.status dpkg-source -b mcmcpack-1.1-1 dpkg-source: info: using source format `3.0 (quilt)' dpkg-source: info: building mcmcpack using existing ./mcmcpack_1.1-1.orig.tar.gz dpkg-source: info: building mcmcpack in mcmcpack_1.1-1-1.debian.tar.gz dpkg-source: info: building mcmcpack in mcmcpack_1.1-1-1.dsc debian/rules build /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead test -x debian/rules mkdir -p "." /usr/bin/make -f debian/rules reverse-config /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead make[1]: Entering directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1' make[1]: Nothing to be done for `reverse-config'. make[1]: Leaving directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1' if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi patches: if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi if [ "debian/stamp-patched" != "reverse-patches" ] ; then \ /usr/bin/make -f debian/rules update-config ; \ fi /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead make[1]: Entering directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1' make[1]: Nothing to be done for `update-config'. make[1]: Leaving directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1' fakeroot debian/rules binary /usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "." dh_installdirs usr/lib/R/site-library if test -f /usr/bin/xvfb-run; then \ xvfb-run -a \ R CMD INSTALL -l /build/mcmcpack-9K2zrb/mcmcpack-1.1-1/debian/r-cran-mcmcpack/usr/lib/R/site-library --clean \ . ; \ else \ R CMD INSTALL -l /build/mcmcpack-9K2zrb/mcmcpack-1.1-1/debian/r-cran-mcmcpack/usr/lib/R/site-library \ --clean . ;\ fi * installing *source* package 'MCMCpack' ... checking for C++ compiler default output file name... a.out checking whether the C++ compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking for trunc in -lm... yes checking for trunc... yes configure: creating ./config.status config.status: creating src/Makevars ** libs make[1]: Entering directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1/src' g++ -I/usr/share/R/include -DSCYTHE_COMPILE_DIRECT -DSCYTHE_DEBUG=0 -DHAVE_TRUNC -DHAVE_TRUNC -fpic -O3 -pipe -g -c MCMCSVDreg.cc -o MCMCSVDreg.o In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1279:11: error: use of undeclared identifier 'referenceNew' referenceNew(M.size()); ^ this-> In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:52: ./la.h:139:12: note: in instantiation of member function 'scythe::Matrix::Matrix' requested here return ones(rows, cols); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:305:9: note: must qualify identifier to find this declaration in dependent base class void referenceNew (uint size) ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1282:11: error: use of undeclared identifier 'referenceOther' referenceOther(M); ^ this-> In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:296:9: note: must qualify identifier to find this declaration in dependent base class void referenceOther (const DataBlockReference& ref, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1326:11: error: use of undeclared identifier 'referenceNew' referenceNew(M.size()); ^ ./matrix.h:2736:39: note: in instantiation of function template specialization 'scythe::Matrix::Matrix<0, 0>' requested here Matrix tmp(*this); ^ ./matrix.h:2777:5: note: in instantiation of member function 'scythe::Matrix::resize' requested here resize(M.rows(), M.cols(), preserve); ^ ./matrix.h:1962:11: note: in instantiation of function template specialization 'scythe::Matrix::resize2Match' requested here resize2Match(M); ^ MCMCSVDreg.cc:111:18: note: in instantiation of member function 'scythe::Matrix::operator=' requested here beta_store = Matrix(k, nstore); ^ MCMCSVDreg.cc:314:5: note: in instantiation of function template specialization 'MCMCSVDreg_impl' requested here MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ MCMCSVDreg.cc:314:28: note: instantiated from: MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:305:9: note: must qualify identifier to find this declaration in dependent base class void referenceNew (uint size) ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1329:11: error: use of undeclared identifier 'referenceOther' referenceOther(M); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:296:9: note: must qualify identifier to find this declaration in dependent base class void referenceOther (const DataBlockReference& ref, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1279:11: error: no member named 'referenceNew' in 'scythe::Matrix' referenceNew(M.size()); ^~~~~~~~~~~~ ./matrix.h:1810:12: note: in instantiation of member function 'scythe::Matrix::Matrix' requested here return (Matrix ^ MCMCSVDreg.cc:162:28: note: in instantiation of member function 'scythe::Matrix::operator()' requested here Matrix<> margmeanvec = FtD(_,i) * g0[i]; ^ MCMCSVDreg.cc:314:5: note: in instantiation of function template specialization 'MCMCSVDreg_impl' requested here MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ MCMCSVDreg.cc:314:28: note: instantiated from: MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1326:11: error: use of undeclared identifier 'referenceNew' referenceNew(M.size()); ^ ./matrix.h:2736:39: note: in instantiation of function template specialization 'scythe::Matrix::Matrix<0, 0>' requested here Matrix tmp(*this); ^ ./matrix.h:2777:5: note: in instantiation of member function 'scythe::Matrix::resize' requested here resize(M.rows(), M.cols(), preserve); ^ ./matrix.h:1962:11: note: in instantiation of function template specialization 'scythe::Matrix::resize2Match' requested here resize2Match(M); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:50: In file included from ./distributions.h:98: ./ide.h:467:18: note: in instantiation of member function 'scythe::Matrix::operator=' requested here perm_vec = Matrix(1, 1); // all 0s ^ ./ide.h:909:14: note: in instantiation of function template specialization 'scythe::::lu_decomp_alg<0, 0, double, 0, 0, 0>' requested here T sign = lu_decomp_alg(AA, L, U, perm_vec); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:50: ./distributions.h:2538:56: note: in instantiation of function template specialization 'scythe::det' requested here return ( (-k/2.0)*std::log(2*M_PI) -0.5 * std::log(det(Sigma)) ^ MCMCSVDreg.cc:172:20: note: in instantiation of function template specialization 'scythe::lndmvn<0, 0, 0, 0, 0, 0>' requested here double logfnot0 = lndmvn(residvec, margmeanvec, margVarmat); ^ MCMCSVDreg.cc:314:5: note: in instantiation of function template specialization 'MCMCSVDreg_impl' requested here MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ MCMCSVDreg.cc:314:28: note: instantiated from: MCMCPACK_PASSRNG2MODEL(MCMCSVDreg_impl, ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:305:9: note: must qualify identifier to find this declaration in dependent base class void referenceNew (uint size) ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: ./matrix.h:1329:11: error: use of undeclared identifier 'referenceOther' referenceOther(M); ^ In file included from MCMCSVDreg.cc:36: In file included from ./MCMCrng.h:29: In file included from ./mersenne.h:76: In file included from ./rng.h:47: In file included from ./matrix.h:63: ./datablock.h:296:9: note: must qualify identifier to find this declaration in dependent base class void referenceOther (const DataBlockReference& ref, ^ 7 errors generated. make[1]: *** [MCMCSVDreg.o] Error 1 make[1]: Leaving directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1/src' make[1]: Entering directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1/src' make[1]: Leaving directory `/build/mcmcpack-9K2zrb/mcmcpack-1.1-1/src' ERROR: compilation failed for package 'MCMCpack' * removing '/build/mcmcpack-9K2zrb/mcmcpack-1.1-1/debian/r-cran-mcmcpack/usr/lib/R/site-library/MCMCpack' make: *** [R_any_arch] Error 1 dpkg-buildpackage: error: fakeroot debian/rules binary gave error exit status 2 ──────────────────────────────────────────────────────────────────────────────── Build finished at 20110911-1354 Finished ──────── E: Build failure (dpkg-buildpackage died) ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /var/lib/schroot/mount/lsid64c-5ee3d9bf-5b82-416b-a90b-2db6d336b178/build/mcmcpack-9K2zrb Not cleaning session: cloned chroot in use ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Architecture: amd64 Build-Space: 2580 Build-Time: 515 Distribution: lsid64c Fail-Stage: build Install-Time: 232 Job: mcmcpack_1.1-1-1 Package: mcmcpack Package-Time: 1342 Source-Version: 1.1-1-1 Space: 2580 Status: attempted Version: 1.1-1-1 ──────────────────────────────────────────────────────────────────────────────── Finished at 20110911-1354 Build needed 00:22:22, 2580k disc space DC-Build-Status: Failed 3375.395731s ### Content of /var/log/daemon.log ### Sep 11 10:47:40 talc-104 approx: Concurrent download of debian/dists/sid/Release.gpg is taking too long Sep 11 10:47:51 talc-104 approx: Concurrent download of debian/dists/sid/Release.gpg is taking too long Sep 11 10:48:32 talc-104 approx: Concurrent download of debian/dists/sid/Release is taking too long Sep 11 10:49:10 talc-104 approx: Concurrent download of debian/dists/sid/main/source/Sources.xz is taking too long ### End of content of /var/log/daemon.log ### DC-Time-Estimation: 3375.395731 versus expected 176 (r/m: 18.1783848352273 ; m: 176.0) DC-Build-Network: USED. See /tmp/rulesafter.Wenb6g ! ************************************************************ # Generated by iptables-save v1.4.8 on Sun Sep 11 13:58:56 2011 *filter :INPUT ACCEPT [3591496:19394351146] :FORWARD ACCEPT [0:0] :OUTPUT DROP [0:0] :LD - [0:0] [1361510:17148446219] -A OUTPUT -o lo -j ACCEPT [0:0] -A OUTPUT -d 129.88.0.0/16 -j ACCEPT [0:0] -A OUTPUT -d 10.0.0.0/8 -j ACCEPT [0:0] -A OUTPUT -d 192.168.133.0/24 -j ACCEPT [0:0] -A OUTPUT -d 192.168.159.0/24 -j ACCEPT [0:0] -A OUTPUT -d 192.168.160.0/24 -j ACCEPT [0:0] -A OUTPUT -d 10.69.0.0/17 -j ACCEPT [0:0] -A OUTPUT -d 172.28.52.0/22 -j ACCEPT [0:0] -A OUTPUT -d 172.24.0.0/16 -j ACCEPT [0:0] -A OUTPUT -d 131.254.202.0/23 -j ACCEPT [0:0] -A OUTPUT -d 138.96.20.0/22 -j ACCEPT [0:0] -A OUTPUT -d 192.168.22.0/24 -j ACCEPT [735367:86222573] -A OUTPUT -d 172.16.0.0/16 -j ACCEPT [6117:585688] -A OUTPUT -d 224.0.0.0/4 -p udp -j ACCEPT [6:360] -A OUTPUT -j LD [6:360] -A LD -j LOG [6:360] -A LD -j REJECT --reject-with icmp-port-unreachable COMMIT # Completed on Sun Sep 11 13:58:56 2011 ************************************************************ --- /tmp/rulesbefore.Kq3DpD 2011-09-11 13:02:40.930600369 +0200 +++ /tmp/rulesafter.Wenb6g 2011-09-11 13:58:56.754812849 +0200 @@ -1,10 +1,10 @@ -# Generated by iptables-save v1.4.8 on Sun Sep 11 13:02:40 2011 +# Generated by iptables-save v1.4.8 on Sun Sep 11 13:58:56 2011 *filter -:INPUT ACCEPT [2991568:16399548369] +:INPUT ACCEPT [3591496:19394351146] :FORWARD ACCEPT [0:0] :OUTPUT DROP [0:0] :LD - [0:0] -[1113077:14379804401] -A OUTPUT -o lo -j ACCEPT +[1361510:17148446219] -A OUTPUT -o lo -j ACCEPT [0:0] -A OUTPUT -d 129.88.0.0/16 -j ACCEPT [0:0] -A OUTPUT -d 10.0.0.0/8 -j ACCEPT [0:0] -A OUTPUT -d 192.168.133.0/24 -j ACCEPT @@ -16,10 +16,10 @@ [0:0] -A OUTPUT -d 131.254.202.0/23 -j ACCEPT [0:0] -A OUTPUT -d 138.96.20.0/22 -j ACCEPT [0:0] -A OUTPUT -d 192.168.22.0/24 -j ACCEPT -[660723:76975043] -A OUTPUT -d 172.16.0.0/16 -j ACCEPT -[4294:412332] -A OUTPUT -d 224.0.0.0/4 -p udp -j ACCEPT +[735367:86222573] -A OUTPUT -d 172.16.0.0/16 -j ACCEPT +[6117:585688] -A OUTPUT -d 224.0.0.0/4 -p udp -j ACCEPT [6:360] -A OUTPUT -j LD [6:360] -A LD -j LOG [6:360] -A LD -j REJECT --reject-with icmp-port-unreachable COMMIT -# Completed on Sun Sep 11 13:02:40 2011 +# Completed on Sun Sep 11 13:58:56 2011 ************************************************************ [ 12.130124] ACPI: SSDT 00000000bff0134a 0016E (v01 PmRef Cpu6Ist 00003000 INTL 20050228) [ 12.180410] processor LNXCPU:06: registered as cooling_device6 [ 12.215948] ACPI: SSDT 00000000bff014b8 0016E (v01 PmRef Cpu7Ist 00003000 INTL 20050228) [ 12.266272] processor LNXCPU:07: registered as cooling_device7 [ 12.524229] Adding 3911788k swap on /dev/sda1. Priority:-1 extents:1 across:3911788k [ 12.573870] EXT3 FS on sda3, internal journal [ 12.808659] kjournald starting. Commit interval 5 seconds [ 12.808814] EXT3 FS on sda5, internal journal [ 12.808818] EXT3-fs: mounted filesystem with ordered data mode. [ 13.280277] e1000e 0000:0f:00.0: irq 54 for MSI/MSI-X [ 13.336049] e1000e 0000:0f:00.0: irq 54 for MSI/MSI-X [ 13.338228] ADDRCONF(NETDEV_UP): eth0: link is not ready [ 16.383905] e1000e: eth0 NIC Link is Up 1000 Mbps Full Duplex, Flow Control: RX/TX [ 16.433635] ADDRCONF(NETDEV_CHANGE): eth0: link becomes ready [ 26.632004] eth0: no IPv6 routers present [ 420.832593] RPC: Registered udp transport module. [ 420.860860] RPC: Registered tcp transport module. [ 420.889107] RPC: Registered tcp NFSv4.1 backchannel transport module. [ 420.957542] Slow work thread pool: Starting up [ 420.984313] Slow work thread pool: Ready [ 421.007912] FS-Cache: Loaded [ 421.052720] FS-Cache: Netfs 'nfs' registered for caching [ 421.089543] svc: failed to register lockdv1 RPC service (errno 97). [ 452.382084] Adding 296929352k swap on /dev/sda5. Priority:-2 extents:1 across:296929352k [ 469.864304] ip_tables: (C) 2000-2006 Netfilter Core Team [ 1106.743984] IN= OUT=eth0 SRC=172.16.66.104 DST=192.9.162.55 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=48358 DF PROTO=TCP SPT=48047 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [ 1109.833015] IN= OUT=eth0 SRC=172.16.66.104 DST=192.9.162.55 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=48359 DF PROTO=TCP SPT=48047 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [ 2698.120299] IN= OUT=eth0 SRC=172.16.66.104 DST=137.208.57.38 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=29564 DF PROTO=TCP SPT=43641 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [ 2701.208010] IN= OUT=eth0 SRC=172.16.66.104 DST=137.208.57.38 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=29565 DF PROTO=TCP SPT=43641 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [ 2701.578991] IN= OUT=eth0 SRC=172.16.66.104 DST=84.237.118.144 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=45300 DF PROTO=TCP SPT=58667 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [ 2704.669507] IN= OUT=eth0 SRC=172.16.66.104 DST=84.237.118.144 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=45301 DF PROTO=TCP SPT=58667 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [ 5915.661021] clang[14572]: segfault at 8 ip 0000000000803627 sp 00007fff3554a300 error 4 [ 5915.689540] clang[14574]: segfault at 8 ip 0000000000803627 sp 00007fff67ed7a40 error 4 in clang[400000+8e1000] [ 5915.694708] clang[14576]: segfault at 8 ip 0000000000803627 sp 00007fffe3e50b30 error 4 in clang[400000+8e1000] [ 5915.721873] clang[14578]: segfault at 8 ip 0000000000803627 sp 00007fff64fd9970 error 4 in clang[400000+8e1000] [ 5915.737056] clang[14577]: segfault at 8 ip 0000000000803627 sp 00007fffd4f08ca0 error 4 in clang[400000+8e1000] [ 5915.908332] clang[14580]: segfault at 8 ip 0000000000803627 sp 00007fffee2500a0 error 4 in clang[400000+8e1000] [ 5915.915688] clang[14581]: segfault at 8 ip 0000000000803627 sp 00007fffe4745770 error 4 in clang[400000+8e1000] [ 5915.920159] clang[14573]: segfault at 8 ip 0000000000803627 sp 00007fff88dedbb0 error 4 in clang[400000+8e1000] [ 5916.136507] in clang[400000+8e1000] [ 6483.845013] clang[5102]: segfault at 8 ip 0000000000803627 sp 00007fff8fb64dd0 error 4 [ 6483.846054] clang[5101]: segfault at 8 ip 0000000000803627 sp 00007fff531c0e60 error 4 in clang[400000+8e1000] [ 6483.847513] clang[5103]: segfault at 8 ip 0000000000803627 sp 00007fff76a24070 error 4 in clang[400000+8e1000] [ 6483.874111] clang[5104]: segfault at 8 ip 0000000000803627 sp 00007fff02d0cc70 error 4 in clang[400000+8e1000] [ 6483.875734] clang[5100]: segfault at 8 ip 0000000000803627 sp 00007fff6d126560 error 4 in clang[400000+8e1000] [ 6484.132305] in clang[400000+8e1000] [ 6484.140655] clang[5108]: segfault at 8 ip 0000000000803627 sp 00007fffac4e04e0 error 4 in clang[400000+8e1000] [ 6484.141613] clang[5105]: segfault at 8 ip 0000000000803627 sp 00007fffe8cb92c0 error 4 in clang[400000+8e1000] [ 6484.148650] clang[5106]: segfault at 8 ip 0000000000803627 sp 00007fff82194450 error 4 in clang[400000+8e1000] [ 6484.333670] ************************************************************