DC-Build-Header: nipype 0.4.1-1 / Sun Sep 11 14:21:35 +0200 2011 Another build requested exclusive access to the build node Another build requested exclusive access to the build node Another build requested exclusive access to the build node sbuild (Debian sbuild) 0.62.2 (05 Apr 2011) on talc-1.nancy.grid5000.fr ╔══════════════════════════════════════════════════════════════════════════════╗ ║ nipype 0.4.1-1 (amd64) 11 Sep 2011 14:23 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: nipype Version: 0.4.1-1 Source Version: 0.4.1-1 Distribution: lsid64c Architecture: amd64 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Ign http://localhost sid InRelease Hit http://localhost sid Release.gpg Hit http://localhost sid Release Ign http://localhost sid/main Sources/DiffIndex Ign http://localhost sid/main amd64 Packages/DiffIndex Ign http://localhost sid/main TranslationIndex Hit http://localhost sid/main Sources Hit http://localhost sid/main amd64 Packages Ign http://localhost sid/main Translation-en Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: binutils cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-bin libc-dev-bin libc6 libc6-dev libgcc1 libgomp1 libquadmath0 libstdc++6 libstdc++6-4.6-dev multiarch-support 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 34.4 MB of archives. After this operation, 1073 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libc6-dev libc-dev-bin libgomp1 gcc-4.6-base libgcc1 cpp-4.6 libquadmath0 libstdc++6-4.6-dev g++-4.6 gcc-4.6 libstdc++6 binutils libc-bin libc6 multiarch-support Authentication warning overridden. Get:1 http://localhost/debian/ sid/main libc6-dev amd64 2.13-20 [2637 kB] Get:2 http://localhost/debian/ sid/main libc-dev-bin amd64 2.13-20 [217 kB] Get:3 http://localhost/debian/ sid/main libgomp1 amd64 4.6.1-10 [25.7 kB] Get:4 http://localhost/debian/ sid/main gcc-4.6-base amd64 4.6.1-10 [135 kB] Get:5 http://localhost/debian/ sid/main libgcc1 amd64 1:4.6.1-10 [42.9 kB] Get:6 http://localhost/debian/ sid/main cpp-4.6 amd64 4.6.1-10 [4816 kB] Get:7 http://localhost/debian/ sid/main libquadmath0 amd64 4.6.1-10 [126 kB] Get:8 http://localhost/debian/ sid/main libstdc++6-4.6-dev amd64 4.6.1-10 [1660 kB] Get:9 http://localhost/debian/ sid/main g++-4.6 amd64 4.6.1-10 [6952 kB] Get:10 http://localhost/debian/ sid/main gcc-4.6 amd64 4.6.1-10 [7303 kB] Get:11 http://localhost/debian/ sid/main libstdc++6 amd64 4.6.1-10 [337 kB] Get:12 http://localhost/debian/ sid/main binutils amd64 2.21.53.20110910-1 [4844 kB] Get:13 http://localhost/debian/ sid/main libc-bin amd64 2.13-20 [819 kB] Get:14 http://localhost/debian/ sid/main libc6 amd64 2.13-20 [4323 kB] Get:15 http://localhost/debian/ sid/main multiarch-support amd64 2.13-20 [141 kB] Preconfiguring packages ... Fetched 34.4 MB in 0s (62.1 MB/s) (Reading database ... 10788 files and directories currently installed.) Preparing to replace libc6-dev 2.13-18 (using .../libc6-dev_2.13-20_amd64.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-dev-bin 2.13-18 (using .../libc-dev-bin_2.13-20_amd64.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libgomp1 4.6.1-9 (using .../libgomp1_4.6.1-10_amd64.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.6-base 4.6.1-9 (using .../gcc-4.6-base_4.6.1-10_amd64.deb) ... Unpacking replacement gcc-4.6-base ... Setting up gcc-4.6-base (4.6.1-10) ... (Reading database ... 10788 files and directories currently installed.) Preparing to replace libgcc1 1:4.6.1-9 (using .../libgcc1_1%3a4.6.1-10_amd64.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.6.1-10) ... (Reading database ... 10788 files and directories currently installed.) Preparing to replace cpp-4.6 4.6.1-9 (using .../cpp-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement cpp-4.6 ... Preparing to replace libquadmath0 4.6.1-9 (using .../libquadmath0_4.6.1-10_amd64.deb) ... Unpacking replacement libquadmath0 ... Preparing to replace libstdc++6-4.6-dev 4.6.1-9 (using .../libstdc++6-4.6-dev_4.6.1-10_amd64.deb) ... Unpacking replacement libstdc++6-4.6-dev ... Preparing to replace g++-4.6 4.6.1-9 (using .../g++-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement g++-4.6 ... Preparing to replace gcc-4.6 4.6.1-9 (using .../gcc-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement gcc-4.6 ... Preparing to replace libstdc++6 4.6.1-9 (using .../libstdc++6_4.6.1-10_amd64.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.6.1-10) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace binutils 2.21.53.20110823-3 (using .../binutils_2.21.53.20110910-1_amd64.deb) ... Unpacking replacement binutils ... Preparing to replace libc-bin 2.13-18 (using .../libc-bin_2.13-20_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-20) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace libc6 2.13-18 (using .../libc6_2.13-20_amd64.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.13-20) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace multiarch-support 2.13-18 (using .../multiarch-support_2.13-20_amd64.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.13-20) ... Setting up libc-dev-bin (2.13-20) ... Setting up libc6-dev (2.13-20) ... Setting up libgomp1 (4.6.1-10) ... Setting up cpp-4.6 (4.6.1-10) ... Setting up libquadmath0 (4.6.1-10) ... Setting up binutils (2.21.53.20110910-1) ... Setting up gcc-4.6 (4.6.1-10) ... Setting up libstdc++6-4.6-dev (4.6.1-10) ... Setting up g++-4.6 (4.6.1-10) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... NOTICE: 'nipype' packaging is maintained in the 'Git' version control system at: git://git.debian.org/git/pkg-exppsy/nipype.git Need to get 942 kB of source archives. Get:1 http://localhost/debian/ sid/main nipype 0.4.1-1 (dsc) [1656 B] Get:2 http://localhost/debian/ sid/main nipype 0.4.1-1 (tar) [934 kB] Get:3 http://localhost/debian/ sid/main nipype 0.4.1-1 (diff) [6504 B] Fetched 942 kB in 37s (24.9 kB/s) Download complete and in download only mode Check arch ────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/build/nipype-GvmI5_/resolver-t1ouQP/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/700 B of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! sbuild-build-depends-core-dummy Authentication warning overridden. Selecting previously deselected package sbuild-build-depends-core-dummy. (Reading database ... 10801 files and directories currently installed.) Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Cannot open /var/lib/schroot/mount/lsid64c-3fe12468-d98a-4550-8ed2-9204289ba5fa/etc/lsb-release: No such file or directory Merged Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 7), python-support (>= 0.6), python (>= 2.6), python-setuptools (>= 0.6), python-sphinx (>= 0.6), python-nose, python-simplejson, python-traits (>= 4.0) | python-traits4, python-scipy, python-matplotlib, python-sympy, python-nibabel (>= 1.0.0~), python-nitime, python-nipy (>= 0.1.2+20101206-1~), python-networkx (>= 1.3), python-cfflib, graphviz, ipython Merged Build-Conflicts: python-networkx (<= 1.0~rc1~) Filtered Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 7), python-support (>= 0.6), python (>= 2.6), python-setuptools (>= 0.6), python-sphinx (>= 0.6), python-nose, python-simplejson, python-traits (>= 4.0), python-scipy, python-matplotlib, python-sympy, python-nibabel (>= 1.0.0~), python-nitime, python-nipy (>= 0.1.2+20101206-1~), python-networkx (>= 1.3), python-cfflib, graphviz, ipython Filtered Build-Conflicts: python-networkx (<= 1.0~rc1~) dpkg-deb: building package `sbuild-build-depends-nipype-dummy' in `/build/nipype-GvmI5_/resolver-YgIio3/apt_archive/sbuild-build-depends-nipype-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install nipype build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils cdbs debhelper docutils-common file fontconfig fontconfig-config gettext gettext-base gir1.2-glib-2.0 graphviz groff-base html2text intltool-debian ipython libamd2.2.0 libatk1.0-0 libatk1.0-data libavahi-client3 libavahi-common-data libavahi-common3 libblas3gf libcairo2 libcdt4 libcgraph5 libcroco3 libcups2 libdatrie1 libdb4.8 libdbus-1-3 libexpat1 libfontconfig1 libfreetype6 libgcrypt11 libgd2-noxpm libgdk-pixbuf2.0-0 libgfortran3 libgirepository-1.0-1 libglib2.0-0 libgnutls26 libgpg-error0 libgraph4 libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libgvc5 libgvpr1 libice6 libjasper1 libjpeg62 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3gf libmagic1 libp11-kit0 libpango1.0-0 libpathplan4 libpcre3 libpipeline1 libpixman-1-0 libpng12-0 libsm6 libsqlite3-0 libssl1.0.0 libtasn1-3 libthai-data libthai0 libtiff4 libumfpack5.4.0 libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxslt1.1 libxss1 libxt6 man-db mime-support po-debconf python python-cairo python-central python-cfflib python-dateutil python-docutils python-gobject python-jinja2 python-lxml python-markupsafe python-matplotlib python-matplotlib-data python-minimal python-networkx python-nibabel python-nipy python-nipy-lib python-nitime python-nose python-numpy python-pexpect python-pkg-resources python-pygments python-pyparsing python-roman python-scipy python-setuptools python-simplejson python-sphinx python-support python-sympy python-traits python-tz python2.6 python2.6-minimal shared-mime-info tcl8.5 tk8.5 ttf-dejavu-core ttf-lyx ucf x11-common Suggested packages: wamerican wordlist whois vacation devscripts dh-make defoma gettext-doc gsfonts graphviz-doc groff python-gtk2 python-profiler python-qt3 python-qt4 cups-common rng-tools libgd-tools gnutls-bin krb5-doc krb5-user librsvg2-common gvfs libjasper-runtime ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp www-browser libmail-box-perl python-doc python-tk texlive-latex-recommended texlive-latex-base texlive-lang-french python-gobject-dbg python-jinja2-doc python-lxml-dbg dvipng python-configobj python-excelerator python-matplotlib-doc texlive-extra-utils texlive-latex-extra python-nibabel-doc python-mvpa python-coverage python-numpy-doc python-numpy-dbg python-dev gfortran python-distribute python-distribute-doc ttf-bitstream-vera jsmath python-traitsui python2.6-doc binfmt-support tclreadline Recommended packages: autotools-dev curl wget lynx-cur autopoint ttf-liberation global python-foolscap python-openssl python-twisted-core python-wxgtk2.8 python-zope.interface dbus libglib2.0-data hicolor-icon-theme libgtk2.0-bin javascript-common x-ttcidfont-conf xml-core libmail-sendmail-perl python-tables python-h5py python-imaging libpaper-utils docutils-doc python-gobject-cairo python-glade2 python-pygraphviz python-pydot python-yaml python-dicom mayavi2 python-chardet python-ctypes xterm x-terminal-emulator The following NEW packages will be installed: bsdmainutils cdbs debhelper docutils-common file fontconfig fontconfig-config gettext gettext-base gir1.2-glib-2.0 graphviz groff-base html2text intltool-debian ipython libamd2.2.0 libatk1.0-0 libatk1.0-data libavahi-client3 libavahi-common-data libavahi-common3 libblas3gf libcairo2 libcdt4 libcgraph5 libcroco3 libcups2 libdatrie1 libdb4.8 libdbus-1-3 libexpat1 libfontconfig1 libfreetype6 libgcrypt11 libgd2-noxpm libgdk-pixbuf2.0-0 libgfortran3 libgirepository-1.0-1 libglib2.0-0 libgnutls26 libgpg-error0 libgraph4 libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libgvc5 libgvpr1 libice6 libjasper1 libjpeg62 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3gf libmagic1 libp11-kit0 libpango1.0-0 libpathplan4 libpcre3 libpipeline1 libpixman-1-0 libpng12-0 libsm6 libsqlite3-0 libssl1.0.0 libtasn1-3 libthai-data libthai0 libtiff4 libumfpack5.4.0 libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxslt1.1 libxss1 libxt6 man-db mime-support po-debconf python python-cairo python-central python-cfflib python-dateutil python-docutils python-gobject python-jinja2 python-lxml python-markupsafe python-matplotlib python-matplotlib-data python-minimal python-networkx python-nibabel python-nipy python-nipy-lib python-nitime python-nose python-numpy python-pexpect python-pkg-resources python-pygments python-pyparsing python-roman python-scipy python-setuptools python-simplejson python-sphinx python-support python-sympy python-traits python-tz python2.6 python2.6-minimal sbuild-build-depends-nipype-dummy shared-mime-info tcl8.5 tk8.5 ttf-dejavu-core ttf-lyx ucf x11-common 0 upgraded, 147 newly installed, 0 to remove and 0 not upgraded. Need to get 94.1 MB/94.1 MB of archives. After this operation, 295 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpipeline1 libssl1.0.0 libgpg-error0 libgcrypt11 libp11-kit0 libtasn1-3 libgnutls26 libkeyutils1 libkrb5support0 libk5crypto3 libkrb5-3 libgssapi-krb5-2 libpcre3 libglib2.0-0 libatk1.0-data libatk1.0-0 libavahi-common-data libavahi-common3 libdbus-1-3 libavahi-client3 libcups2 libdatrie1 libexpat1 libfreetype6 ucf ttf-dejavu-core fontconfig-config libfontconfig1 libjpeg8 libjasper1 libpng12-0 libjpeg62 libtiff4 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libgdk-pixbuf2.0-0 libgfortran3 libgtk2.0-common libpixman-1-0 libxcb-render0 libxcb-shm0 libxrender1 libcairo2 libthai-data libthai0 libxft2 fontconfig libpango1.0-0 libxcomposite1 libxfixes3 libxcursor1 libxdamage1 libxext6 libxi6 libxinerama1 libxrandr2 libxml2 shared-mime-info libgtk2.0-0 x11-common libice6 libsm6 libxss1 libxt6 libdb4.8 bsdmainutils groff-base man-db libmagic1 file gettext-base libsqlite3-0 mime-support python2.6-minimal python2.6 python-minimal python python-central python-support html2text libcroco3 libunistring0 gettext intltool-debian po-debconf debhelper cdbs docutils-common libgirepository-1.0-1 gir1.2-glib-2.0 libcdt4 libcgraph5 libgd2-noxpm libgraph4 libpathplan4 libxdot4 libgvc5 libgvpr1 libxmu6 libxpm4 libxaw7 graphviz python-pexpect ipython libamd2.2.0 libblas3gf libjs-jquery libjs-underscore libjs-sphinxdoc liblapack3gf libumfpack5.4.0 libxslt1.1 python-cairo python-dateutil python-roman python-docutils python-gobject python-markupsafe python-jinja2 python-lxml ttf-lyx python-matplotlib-data python-numpy python-pyparsing python-tz tcl8.5 tk8.5 python-matplotlib python-networkx python-pkg-resources python-nose python-pygments python-setuptools python-simplejson python-sphinx python-sympy python-traits python-scipy python-nibabel python-cfflib python-nipy-lib python-nipy python-nitime sbuild-build-depends-nipype-dummy Authentication warning overridden. Get:1 http://localhost/debian/ sid/main libpipeline1 amd64 1.2.0-3 [37.9 kB] Get:2 http://localhost/debian/ sid/main libssl1.0.0 amd64 1.0.0e-2 [1143 kB] Get:3 http://localhost/debian/ sid/main libgpg-error0 amd64 1.10-1 [66.6 kB] Get:4 http://localhost/debian/ sid/main libgcrypt11 amd64 1.5.0-3 [298 kB] Get:5 http://localhost/debian/ sid/main libp11-kit0 amd64 0.4-2 [45.2 kB] Get:6 http://localhost/debian/ sid/main libtasn1-3 amd64 2.9-4 [63.9 kB] Get:7 http://localhost/debian/ sid/main libgnutls26 amd64 2.12.10-1 [784 kB] Get:8 http://localhost/debian/ sid/main libkeyutils1 amd64 1.5.2-2 [8860 B] Get:9 http://localhost/debian/ sid/main libkrb5support0 amd64 1.9.1+dfsg-2 [47.1 kB] Get:10 http://localhost/debian/ sid/main libk5crypto3 amd64 1.9.1+dfsg-2 [111 kB] Get:11 http://localhost/debian/ sid/main libkrb5-3 amd64 1.9.1+dfsg-2 [381 kB] Get:12 http://localhost/debian/ sid/main libgssapi-krb5-2 amd64 1.9.1+dfsg-2 [147 kB] Get:13 http://localhost/debian/ sid/main libpcre3 amd64 8.12-4 [225 kB] Get:14 http://localhost/debian/ sid/main libglib2.0-0 amd64 2.28.6-1 [1648 kB] Get:15 http://localhost/debian/ sid/main libatk1.0-data all 2.0.1-2 [215 kB] Get:16 http://localhost/debian/ sid/main libatk1.0-0 amd64 2.0.1-2 [93.0 kB] Get:17 http://localhost/debian/ sid/main libavahi-common-data amd64 0.6.30-5 [131 kB] Get:18 http://localhost/debian/ sid/main libavahi-common3 amd64 0.6.30-5 [54.0 kB] Get:19 http://localhost/debian/ sid/main libdbus-1-3 amd64 1.4.14-1 [163 kB] Get:20 http://localhost/debian/ sid/main libavahi-client3 amd64 0.6.30-5 [58.8 kB] Get:21 http://localhost/debian/ sid/main libcups2 amd64 1.5.0-5 [248 kB] Get:22 http://localhost/debian/ sid/main libdatrie1 amd64 0.2.4-3 [27.6 kB] Get:23 http://localhost/debian/ sid/main libexpat1 amd64 2.0.1-7 [137 kB] Get:24 http://localhost/debian/ sid/main libfreetype6 amd64 2.4.6-2 [435 kB] Get:25 http://localhost/debian/ sid/main ucf all 3.0025+nmu2 [70.6 kB] Get:26 http://localhost/debian/ sid/main ttf-dejavu-core all 2.33-2 [1552 kB] Get:27 http://localhost/debian/ sid/main fontconfig-config all 2.8.0-3 [221 kB] Get:28 http://localhost/debian/ sid/main libfontconfig1 amd64 2.8.0-3 [282 kB] Get:29 http://localhost/debian/ sid/main libjpeg8 amd64 8c-2 [132 kB] Get:30 http://localhost/debian/ sid/main libjasper1 amd64 1.900.1-10 [159 kB] Get:31 http://localhost/debian/ sid/main libpng12-0 amd64 1.2.46-3 [188 kB] Get:32 http://localhost/debian/ sid/main libjpeg62 amd64 6b1-2 [94.1 kB] Get:33 http://localhost/debian/ sid/main libtiff4 amd64 3.9.5-1 [200 kB] Get:34 http://localhost/debian/ sid/main libxau6 amd64 1:1.0.6-3 [17.0 kB] Get:35 http://localhost/debian/ sid/main libxdmcp6 amd64 1:1.1.0-3 [22.9 kB] Get:36 http://localhost/debian/ sid/main libxcb1 amd64 1.7-3 [45.4 kB] Get:37 http://localhost/debian/ sid/main libx11-data all 2:1.4.4-1 [183 kB] Get:38 http://localhost/debian/ sid/main libx11-6 amd64 2:1.4.4-1 [889 kB] Get:39 http://localhost/debian/ sid/main libgdk-pixbuf2.0-0 amd64 2.24.0-1 [666 kB] Get:40 http://localhost/debian/ sid/main libgfortran3 amd64 4.6.1-10 [358 kB] Get:41 http://localhost/debian/ sid/main libgtk2.0-common all 2.24.6-1 [7228 kB] Get:42 http://localhost/debian/ sid/main libpixman-1-0 amd64 0.22.2-1 [356 kB] Get:43 http://localhost/debian/ sid/main libxcb-render0 amd64 1.7-3 [16.3 kB] Get:44 http://localhost/debian/ sid/main libxcb-shm0 amd64 1.7-3 [9458 B] Get:45 http://localhost/debian/ sid/main libxrender1 amd64 1:0.9.6-2 [31.5 kB] Get:46 http://localhost/debian/ sid/main libcairo2 amd64 1.10.2-6.1 [948 kB] Get:47 http://localhost/debian/ sid/main libthai-data all 0.1.15-2 [201 kB] Get:48 http://localhost/debian/ sid/main libthai0 amd64 0.1.15-2 [42.9 kB] Get:49 http://localhost/debian/ sid/main libxft2 amd64 2.2.0-3 [58.1 kB] Get:50 http://localhost/debian/ sid/main fontconfig amd64 2.8.0-3 [334 kB] Get:51 http://localhost/debian/ sid/main libpango1.0-0 amd64 1.28.4-3 [442 kB] Get:52 http://localhost/debian/ sid/main libxcomposite1 amd64 1:0.4.3-2 [16.6 kB] Get:53 http://localhost/debian/ sid/main libxfixes3 amd64 1:5.0-4 [21.5 kB] Get:54 http://localhost/debian/ sid/main libxcursor1 amd64 1:1.1.12-1 [26.8 kB] Get:55 http://localhost/debian/ sid/main libxdamage1 amd64 1:1.1.3-2 [14.3 kB] Get:56 http://localhost/debian/ sid/main libxext6 amd64 2:1.3.0-3 [52.3 kB] Get:57 http://localhost/debian/ sid/main libxi6 amd64 2:1.4.3-3 [66.2 kB] Get:58 http://localhost/debian/ sid/main libxinerama1 amd64 2:1.1.1-3 [15.9 kB] Get:59 http://localhost/debian/ sid/main libxrandr2 amd64 2:1.3.2-2 [33.5 kB] Get:60 http://localhost/debian/ sid/main libxml2 amd64 2.7.8.dfsg-4 [892 kB] Get:61 http://localhost/debian/ sid/main shared-mime-info amd64 0.90-1 [1014 kB] Get:62 http://localhost/debian/ sid/main libgtk2.0-0 amd64 2.24.6-1 [2700 kB] Get:63 http://localhost/debian/ sid/main x11-common all 1:7.6+8 [276 kB] Get:64 http://localhost/debian/ sid/main libice6 amd64 2:1.0.7-2 [56.5 kB] Get:65 http://localhost/debian/ sid/main libsm6 amd64 2:1.2.0-2 [29.8 kB] Get:66 http://localhost/debian/ sid/main libxss1 amd64 1:1.2.1-2 [16.9 kB] Get:67 http://localhost/debian/ sid/main libxt6 amd64 1:1.1.1-2 [207 kB] Get:68 http://localhost/debian/ sid/main libdb4.8 amd64 4.8.30-9 [694 kB] Get:69 http://localhost/debian/ sid/main bsdmainutils amd64 8.2.3 [208 kB] Get:70 http://localhost/debian/ sid/main groff-base amd64 1.21-6 [1150 kB] Get:71 http://localhost/debian/ sid/main man-db amd64 2.6.0.2-2 [1023 kB] Get:72 http://localhost/debian/ sid/main libmagic1 amd64 5.08-1 [246 kB] Get:73 http://localhost/debian/ sid/main file amd64 5.08-1 [51.7 kB] Get:74 http://localhost/debian/ sid/main gettext-base amd64 0.18.1.1-4 [154 kB] Get:75 http://localhost/debian/ sid/main libsqlite3-0 amd64 3.7.7-2 [420 kB] Get:76 http://localhost/debian/ sid/main mime-support all 3.51-1 [35.0 kB] Get:77 http://localhost/debian/ sid/main python2.6-minimal amd64 2.6.7-4 [1524 kB] Get:78 http://localhost/debian/ sid/main python2.6 amd64 2.6.7-4 [2483 kB] Get:79 http://localhost/debian/ sid/main python-minimal all 2.6.7-3 [39.2 kB] Get:80 http://localhost/debian/ sid/main python all 2.6.7-3 [177 kB] Get:81 http://localhost/debian/ sid/main python-central all 0.6.17 [47.8 kB] Get:82 http://localhost/debian/ sid/main python-support all 1.0.14 [33.5 kB] Get:83 http://localhost/debian/ sid/main html2text amd64 1.3.2a-15 [103 kB] Get:84 http://localhost/debian/ sid/main libcroco3 amd64 0.6.2-1 [125 kB] Get:85 http://localhost/debian/ sid/main libunistring0 amd64 0.9.3-4 [437 kB] Get:86 http://localhost/debian/ sid/main gettext amd64 0.18.1.1-4 [2079 kB] Get:87 http://localhost/debian/ sid/main intltool-debian all 0.35.0+20060710.1 [30.8 kB] Get:88 http://localhost/debian/ sid/main po-debconf all 1.0.16+nmu1 [223 kB] Get:89 http://localhost/debian/ sid/main debhelper all 8.9.6 [562 kB] Get:90 http://localhost/debian/ sid/main cdbs all 0.4.96 [75.8 kB] Get:91 http://localhost/debian/ sid/main docutils-common all 0.7-4 [186 kB] Get:92 http://localhost/debian/ sid/main libgirepository-1.0-1 amd64 0.10.8-2 [104 kB] Get:93 http://localhost/debian/ sid/main gir1.2-glib-2.0 amd64 0.10.8-2 [150 kB] Get:94 http://localhost/debian/ sid/main libcdt4 amd64 2.26.3-7 [58.8 kB] Get:95 http://localhost/debian/ sid/main libcgraph5 amd64 2.26.3-7 [87.0 kB] Get:96 http://localhost/debian/ sid/main libgd2-noxpm amd64 2.0.36~rc1~dfsg-5.1+b1 [228 kB] Get:97 http://localhost/debian/ sid/main libgraph4 amd64 2.26.3-7 [73.0 kB] Get:98 http://localhost/debian/ sid/main libpathplan4 amd64 2.26.3-7 [64.2 kB] Get:99 http://localhost/debian/ sid/main libxdot4 amd64 2.26.3-7 [53.4 kB] Get:100 http://localhost/debian/ sid/main libgvc5 amd64 2.26.3-7 [555 kB] Get:101 http://localhost/debian/ sid/main libgvpr1 amd64 2.26.3-7 [243 kB] Get:102 http://localhost/debian/ sid/main libxmu6 amd64 2:1.1.0-2 [63.5 kB] Get:103 http://localhost/debian/ sid/main libxpm4 amd64 1:3.5.9-1 [48.4 kB] Get:104 http://localhost/debian/ sid/main libxaw7 amd64 2:1.0.9-2 [220 kB] Get:105 http://localhost/debian/ sid/main graphviz amd64 2.26.3-7 [374 kB] Get:106 http://localhost/debian/ sid/main python-pexpect all 2.3-1 [165 kB] Get:107 http://localhost/debian/ sid/main ipython all 0.10.2-1 [5503 kB] Get:108 http://localhost/debian/ sid/main libamd2.2.0 amd64 1:3.4.0-2 [29.2 kB] Get:109 http://localhost/debian/ sid/main libblas3gf amd64 1.2.20110419-2 [292 kB] Get:110 http://localhost/debian/ sid/main libjs-jquery all 1.6.2-1 [107 kB] Get:111 http://localhost/debian/ sid/main libjs-underscore all 1.1.6-1 [33.7 kB] Get:112 http://localhost/debian/ sid/main libjs-sphinxdoc all 1.0.7+dfsg-1 [37.4 kB] Get:113 http://localhost/debian/ sid/main liblapack3gf amd64 3.3.1-1 [4437 kB] Get:114 http://localhost/debian/ sid/main libumfpack5.4.0 amd64 1:3.4.0-2 [388 kB] Get:115 http://localhost/debian/ sid/main libxslt1.1 amd64 1.1.26-8 [250 kB] Get:116 http://localhost/debian/ sid/main python-cairo amd64 1.8.8-1+b2 [84.2 kB] Get:117 http://localhost/debian/ sid/main python-dateutil all 1.5-1 [53.8 kB] Get:118 http://localhost/debian/ sid/main python-roman all 0.7-4 [47.9 kB] Get:119 http://localhost/debian/ sid/main python-docutils all 0.7-4 [353 kB] Get:120 http://localhost/debian/ sid/main python-gobject amd64 2.28.6-4 [671 kB] Get:121 http://localhost/debian/ sid/main python-markupsafe amd64 0.15-1 [14.6 kB] Get:122 http://localhost/debian/ sid/main python-jinja2 amd64 2.6-1 [168 kB] Get:123 http://localhost/debian/ sid/main python-lxml amd64 2.3-0.1+b2 [1368 kB] Get:124 http://localhost/debian/ sid/main ttf-lyx all 2.0.1-1 [167 kB] Get:125 http://localhost/debian/ sid/main python-matplotlib-data all 1.0.1-3 [2041 kB] Get:126 http://localhost/debian/ sid/main python-numpy amd64 1:1.5.1-2+b1 [2171 kB] Get:127 http://localhost/debian/ sid/main python-pyparsing all 1.5.2-2 [607 kB] Get:128 http://localhost/debian/ sid/main python-tz all 2010b-1 [43.9 kB] Get:129 http://localhost/debian/ sid/main tcl8.5 amd64 8.5.10-1 [1621 kB] Get:130 http://localhost/debian/ sid/main tk8.5 amd64 8.5.10-1 [1181 kB] Get:131 http://localhost/debian/ sid/main python-matplotlib amd64 1.0.1-3 [6613 kB] Get:132 http://localhost/debian/ sid/main python-networkx all 1.5-2 [679 kB] Get:133 http://localhost/debian/ sid/main python-pkg-resources all 0.6.16-1 [63.3 kB] Get:134 http://localhost/debian/ sid/main python-nose all 1.0.0-1 [371 kB] Get:135 http://localhost/debian/ sid/main python-pygments all 1.4+dfsg-2 [365 kB] Get:136 http://localhost/debian/ sid/main python-setuptools all 0.6.16-1 [223 kB] Get:137 http://localhost/debian/ sid/main python-simplejson amd64 2.2.0-1 [79.1 kB] Get:138 http://localhost/debian/ sid/main python-sphinx all 1.0.7+dfsg-1 [1251 kB] Get:139 http://localhost/debian/ sid/main python-sympy all 0.6.7-1.1 [1693 kB] Get:140 http://localhost/debian/ sid/main python-traits amd64 4.0.0-1 [399 kB] Get:141 http://localhost/debian/ sid/main python-scipy amd64 0.9.0+dfsg1-1+b2 [11.8 MB] Get:142 http://localhost/debian/ sid/main python-nibabel all 1.1.0-1 [1675 kB] Get:143 http://localhost/debian/ sid/main python-cfflib all 2.0.5-1 [217 kB] Get:144 http://localhost/debian/ sid/main python-nipy-lib amd64 0.1.2+201100720-2 [1024 kB] Get:145 http://localhost/debian/ sid/main python-nipy all 0.1.2+201100720-2 [703 kB] Get:146 http://localhost/debian/ sid/main python-nitime all 0.3.1-1 [3902 kB] Extracting templates from packages: 20% Extracting templates from packages: 40% Extracting templates from packages: 61% Extracting templates from packages: 81% Extracting templates from packages: 100% Preconfiguring packages ... Fetched 94.1 MB in 2s (43.3 MB/s) Selecting previously deselected package libpipeline1. (Reading database ... 10801 files and directories currently installed.) Unpacking libpipeline1 (from .../libpipeline1_1.2.0-3_amd64.deb) ... Selecting previously deselected package libssl1.0.0. Unpacking libssl1.0.0 (from .../libssl1.0.0_1.0.0e-2_amd64.deb) ... Selecting previously deselected package libgpg-error0. Unpacking libgpg-error0 (from .../libgpg-error0_1.10-1_amd64.deb) ... Selecting previously deselected package libgcrypt11. Unpacking libgcrypt11 (from .../libgcrypt11_1.5.0-3_amd64.deb) ... Selecting previously deselected package libp11-kit0. Unpacking libp11-kit0 (from .../libp11-kit0_0.4-2_amd64.deb) ... Selecting previously deselected package libtasn1-3. Unpacking libtasn1-3 (from .../libtasn1-3_2.9-4_amd64.deb) ... Selecting previously deselected package libgnutls26. Unpacking libgnutls26 (from .../libgnutls26_2.12.10-1_amd64.deb) ... 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Setting up gettext-base (0.18.1.1-4) ... Setting up libsqlite3-0 (3.7.7-2) ... Setting up mime-support (3.51-1) ... Setting up python2.6-minimal (2.6.7-4) ... Setting up python2.6 (2.6.7-4) ... Setting up python-minimal (2.6.7-3) ... Setting up python (2.6.7-3) ... Setting up python-central (0.6.17) ... Setting up python-support (1.0.14) ... Setting up html2text (1.3.2a-15) ... Setting up libcroco3 (0.6.2-1) ... Setting up libunistring0 (0.9.3-4) ... Setting up gettext (0.18.1.1-4) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1) ... Setting up debhelper (8.9.6) ... Setting up cdbs (0.4.96) ... Setting up docutils-common (0.7-4) ... Setting up libgirepository-1.0-1 (0.10.8-2) ... Setting up gir1.2-glib-2.0 (0.10.8-2) ... Setting up libcdt4 (2.26.3-7) ... Setting up libcgraph5 (2.26.3-7) ... Setting up libgd2-noxpm (2.0.36~rc1~dfsg-5.1+b1) ... Setting up libgraph4 (2.26.3-7) ... Setting up libpathplan4 (2.26.3-7) ... 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Setting up python-docutils (0.7-4) ... update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2newlatex to provide /usr/bin/rst2newlatex (rst2newlatex) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode. Setting up python-gobject (2.28.6-4) ... Setting up python-markupsafe (0.15-1) ... Setting up python-jinja2 (2.6-1) ... Setting up python-lxml (2.3-0.1+b2) ... Setting up ttf-lyx (2.0.1-1) ... Setting up python-matplotlib-data (1.0.1-3) ... Setting up python-numpy (1:1.5.1-2+b1) ... Setting up python-pyparsing (1.5.2-2) ... Setting up python-tz (2010b-1) ... Setting up tcl8.5 (8.5.10-1) ... update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode. Setting up tk8.5 (8.5.10-1) ... update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode. Setting up python-networkx (1.5-2) ... Setting up python-pkg-resources (0.6.16-1) ... Setting up python-nose (1.0.0-1) ... Setting up python-pygments (1.4+dfsg-2) ... Setting up python-setuptools (0.6.16-1) ... Setting up python-simplejson (2.2.0-1) ... Setting up python-sphinx (1.0.7+dfsg-1) ... Setting up python-sympy (0.6.7-1.1) ... Setting up python-traits (4.0.0-1) ... Setting up python-scipy (0.9.0+dfsg1-1+b2) ... Setting up python-nibabel (1.1.0-1) ... Setting up python-cfflib (2.0.5-1) ... Setting up python-nipy-lib (0.1.2+201100720-2) ... Setting up python-nipy (0.1.2+201100720-2) ... Setting up python-nitime (0.3.1-1) ... Processing triggers for python-central ... Setting up python-matplotlib (1.0.1-3) ... Setting up ipython (0.10.2-1) ... Setting up sbuild-build-depends-nipype-dummy (0.invalid.0) ... Processing triggers for python-support ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 2.6.32-5-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.21.53.20110910-1 dpkg-dev_1.16.0.3 g++-4.6_4.6.1-10 gcc-4.6_4.6.1-10 libc6-dev_2.13-20 libstdc++6_4.6.1-10 libstdc++6-4.6-dev_4.6.1-10 linux-libc-dev_3.0.0-3 Package versions: apt_0.8.15.6 apt-utils_0.8.15.6 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binutils_2.21.53.20110910-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.5-7 cdbs_0.4.96 clang_2.9-11 coreutils_8.5-1 cpp_4:4.6.1-2 cpp-4.6_4.6.1-10 dash_0.5.7-1 debconf_1.5.41 debfoster_2.7-1.1 debhelper_8.9.6 debian-archive-keyring_2010.08.28 debianutils_4.0.2 diffutils_1:3.0-1 docutils-common_0.7-4 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.42~WIP-2011-07-02-1 e2fsprogs_1.42~WIP-2011-07-02-1 fakeroot_1.18-1 file_5.08-1 findutils_4.4.2-1+b1 fontconfig_2.8.0-3 fontconfig-config_2.8.0-3 g++_4:4.6.1-2 g++-4.6_4.6.1-10 gcc_4:4.6.1-2 gcc-4.6_4.6.1-10 gcc-4.6-base_4.6.1-10 gettext_0.18.1.1-4 gettext-base_0.18.1.1-4 gir1.2-glib-2.0_0.10.8-2 gnupg_1.4.11-3 gpgv_1.4.11-3 graphviz_2.26.3-7 grep_2.9-2 groff-base_1.21-6 gzip_1.4-1 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.11 insserv_1.14.0-2.1 install-info_4.13a.dfsg.1-8 intltool-debian_0.35.0+20060710.1 ipython_0.10.2-1 less_444-1 libacl1_2.2.51-3 libamd2.2.0_1:3.4.0-2 libatk1.0-0_2.0.1-2 libatk1.0-data_2.0.1-2 libattr1_1:2.4.46-3 libavahi-client3_0.6.30-5 libavahi-common-data_0.6.30-5 libavahi-common3_0.6.30-5 libblas3gf_1.2.20110419-2 libblkid1_2.19.1-5 libbz2-1.0_1.0.5-7 libc-bin_2.13-20 libc-dev-bin_2.13-20 libc6_2.13-20 libc6-dev_2.13-20 libcairo2_1.10.2-6.1 libcdt4_2.26.3-7 libcgraph5_2.26.3-7 libcomerr2_1.42~WIP-2011-07-02-1 libcroco3_0.6.2-1 libcups2_1.5.0-5 libdatrie1_0.2.4-3 libdb4.8_4.8.30-9 libdb5.1_5.1.25-11 libdbus-1-3_1.4.14-1 libdpkg-perl_1.16.0.3 libexpat1_2.0.1-7 libffi5_3.0.10~rc10-3 libfontconfig1_2.8.0-3 libfreetype6_2.4.6-2 libgc1c2_1:7.1-8 libgcc1_1:4.6.1-10 libgcrypt11_1.5.0-3 libgd2-noxpm_2.0.36~rc1~dfsg-5.1+b1 libgdbm3_1.8.3-10 libgdk-pixbuf2.0-0_2.24.0-1 libgfortran3_4.6.1-10 libgirepository-1.0-1_0.10.8-2 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.2+dfsg-1 libgnutls26_2.12.10-1 libgomp1_4.6.1-10 libgpg-error0_1.10-1 libgraph4_2.26.3-7 libgssapi-krb5-2_1.9.1+dfsg-2 libgtk2.0-0_2.24.6-1 libgtk2.0-common_2.24.6-1 libgvc5_2.26.3-7 libgvpr1_2.26.3-7 libice6_2:1.0.7-2 libjasper1_1.900.1-10 libjpeg62_6b1-2 libjpeg8_8c-2 libjs-jquery_1.6.2-1 libjs-sphinxdoc_1.0.7+dfsg-1 libjs-underscore_1.1.6-1 libk5crypto3_1.9.1+dfsg-2 libkeyutils1_1.5.2-2 libkrb5-3_1.9.1+dfsg-2 libkrb5support0_1.9.1+dfsg-2 liblapack3gf_3.3.1-1 libllvm2.9_2.9+dfsg-3 liblzma2_5.1.1alpha+20110809-2 libmagic1_5.08-1 libmount1_2.19.1-5 libmpc2_0.9-3 libmpfr4_3.0.1-6 libncurses5_5.9-1 libncursesw5_5.9-1 libp11-kit0_0.4-2 libpam-modules_1.1.3-2 libpam-modules-bin_1.1.3-2 libpam-runtime_1.1.3-2 libpam0g_1.1.3-2 libpango1.0-0_1.28.4-3 libpathplan4_2.26.3-7 libpcre3_8.12-4 libpipeline1_1.2.0-3 libpixman-1-0_0.22.2-1 libpng12-0_1.2.46-3 libquadmath0_4.6.1-10 libreadline6_6.2-4 libselinux1_2.1.0-1 libsepol1_2.1.0-1.1 libslang2_2.2.4-3 libsm6_2:1.2.0-2 libsqlite3-0_3.7.7-2 libss2_1.42~WIP-2011-07-02-1 libssl1.0.0_1.0.0e-2 libstdc++6_4.6.1-10 libstdc++6-4.6-dev_4.6.1-10 libtasn1-3_2.9-4 libthai-data_0.1.15-2 libthai0_0.1.15-2 libtiff4_3.9.5-1 libtimedate-perl_1.2000-1 libumfpack5.4.0_1:3.4.0-2 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-19 libuuid1_2.19.1-5 libx11-6_2:1.4.4-1 libx11-data_2:1.4.4-1 libxau6_1:1.0.6-3 libxaw7_2:1.0.9-2 libxcb-render0_1.7-3 libxcb-shm0_1.7-3 libxcb1_1.7-3 libxcomposite1_1:0.4.3-2 libxcursor1_1:1.1.12-1 libxdamage1_1:1.1.3-2 libxdmcp6_1:1.1.0-3 libxdot4_2.26.3-7 libxext6_2:1.3.0-3 libxfixes3_1:5.0-4 libxft2_2.2.0-3 libxi6_2:1.4.3-3 libxinerama1_2:1.1.1-3 libxml2_2.7.8.dfsg-4 libxmu6_2:1.1.0-2 libxpm4_1:3.5.9-1 libxrandr2_2:1.3.2-2 libxrender1_1:0.9.6-2 libxslt1.1_1.1.26-8 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.0.0-3 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-2 mawk_1.3.3-15 mime-support_3.51-1 mount_2.19.1-5 multiarch-support_2.13-20 ncurses-base_5.9-1 ncurses-bin_5.9-1 nvi_1.81.6-8.2 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.12.4-4 perl-base_5.12.4-4 perl-modules_5.12.4-4 po-debconf_1.0.16+nmu1 python_2.6.7-3 python-cairo_1.8.8-1+b2 python-central_0.6.17 python-cfflib_2.0.5-1 python-dateutil_1.5-1 python-docutils_0.7-4 python-gobject_2.28.6-4 python-jinja2_2.6-1 python-lxml_2.3-0.1+b2 python-markupsafe_0.15-1 python-matplotlib_1.0.1-3 python-matplotlib-data_1.0.1-3 python-minimal_2.6.7-3 python-networkx_1.5-2 python-nibabel_1.1.0-1 python-nipy_0.1.2+201100720-2 python-nipy-lib_0.1.2+201100720-2 python-nitime_0.3.1-1 python-nose_1.0.0-1 python-numpy_1:1.5.1-2+b1 python-pexpect_2.3-1 python-pkg-resources_0.6.16-1 python-pygments_1.4+dfsg-2 python-pyparsing_1.5.2-2 python-roman_0.7-4 python-scipy_0.9.0+dfsg1-1+b2 python-setuptools_0.6.16-1 python-simplejson_2.2.0-1 python-sphinx_1.0.7+dfsg-1 python-support_1.0.14 python-sympy_0.6.7-1.1 python-traits_4.0.0-1 python-tz_2010b-1 python2.6_2.6.7-4 python2.6-minimal_2.6.7-4 readline-common_6.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-nipype-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 shared-mime-info_0.90-1 sysv-rc_2.88dsf-13.11 sysvinit_2.88dsf-13.11 sysvinit-utils_2.88dsf-13.11 tar_1.26-2 tcl8.5_8.5.10-1 tk8.5_8.5.10-1 ttf-dejavu-core_2.33-2 ttf-lyx_2.0.1-1 tzdata_2011i-2 ucf_3.0025+nmu2 util-linux_2.19.1-5 x11-common_1:7.6+8 xz-utils_5.1.1alpha+20110809-2 zlib1g_1:1.2.3.4.dfsg-3 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/var/lib/sbuild/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Sun Jul 17 18:27:18 2011 CEST using DSA key ID 75C024C8 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./nipype_0.4.1-1.dsc dpkg-source: info: extracting nipype in nipype-0.4.1 dpkg-source: info: unpacking nipype_0.4.1.orig.tar.gz dpkg-source: info: unpacking nipype_0.4.1-1.debian.tar.gz dpkg-source: info: applying deb_tollerate_exceptions_while_docbuilding Check disc space ──────────────── Sufficient free space for build dpkg-buildpackage ───────────────── dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: source package nipype dpkg-buildpackage: source version 0.4.1-1 dpkg-source --before-build nipype-0.4.1 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions test -x debian/rules dh_testroot dh_clean cd . && \ python setup.py clean \ -a /usr/lib/python2.6/distutils/dist.py:266: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) /build/nipype-GvmI5_/nipype-0.4.1/nipype/__init__.py:94: UserWarning: Running the tests from the install directory may trigger some failures warnings.warn('Running the tests from the install directory may ' running clean 'build/lib.linux-x86_64-2.6' does not exist -- can't clean it 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts.linux-x86_64-2.6' does not exist -- can't clean it rm -rf debian/python-module-stampdir find "/build/nipype-GvmI5_/nipype-0.4.1" -name '*.py[co]' -delete find "/build/nipype-GvmI5_/nipype-0.4.1" -name __pycache__ -type d -empty -delete find "/build/nipype-GvmI5_/nipype-0.4.1" -prune -name '*.egg-info' -exec rm -rf '{}' ';' rm -rf build pypeline.log /usr/bin/make -C doc clean make[1]: Entering directory `/build/nipype-GvmI5_/nipype-0.4.1/doc' rm -rf _build/* *~ api/generated documentation.zip make[1]: Leaving directory `/build/nipype-GvmI5_/nipype-0.4.1/doc' dpkg-source -b nipype-0.4.1 dpkg-source: info: using source format `3.0 (quilt)' dpkg-source: info: building nipype using existing ./nipype_0.4.1.orig.tar.gz dpkg-source: info: building nipype in nipype_0.4.1-1.debian.tar.gz dpkg-source: info: building nipype in nipype_0.4.1-1.dsc debian/rules build pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions test -x debian/rules mkdir -p "." /usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable mkdir -p debian/python-module-stampdir cd . && \ python setup.py build \ --build-base="/build/nipype-GvmI5_/nipype-0.4.1/./build" /usr/lib/python2.6/distutils/dist.py:266: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) /build/nipype-GvmI5_/nipype-0.4.1/nipype/__init__.py:94: UserWarning: Running the tests from the install directory may trigger some failures warnings.warn('Running the tests from the install directory may ' running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_py creating /build/nipype-GvmI5_/nipype-0.4.1/build creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6 creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype copying nipype/version.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype copying nipype/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype copying nipype/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/rapidart.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/modelgen.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/misc.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/utility.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/traits_extension.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/slicer.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/rest.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/pymvpa.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/matlab.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/io.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/dcm2nii.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/base.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/afni copying nipype/interfaces/afni/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/afni copying nipype/interfaces/afni/preprocess.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/afni copying nipype/interfaces/afni/base.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/afni copying nipype/interfaces/afni/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/afni creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/dti.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/convert.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/connectivity.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/camino2trackvis copying nipype/interfaces/camino2trackvis/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino2trackvis copying nipype/interfaces/camino2trackvis/convert.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino2trackvis copying nipype/interfaces/camino2trackvis/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino2trackvis creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk copying nipype/interfaces/cmtk/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk copying nipype/interfaces/cmtk/convert.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk copying nipype/interfaces/cmtk/cmtk.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk copying nipype/interfaces/cmtk/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/postproc.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/odf.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/dti.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/base.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/utils.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/preprocess.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/model.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/base.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/utils.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/preprocess.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/model.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/maths.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/dti.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/base.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/nipy copying nipype/interfaces/nipy/preprocess.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/nipy copying nipype/interfaces/nipy/model.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/nipy copying nipype/interfaces/nipy/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/nipy creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/utils.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/preprocess.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/model.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/base.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/pipeline copying nipype/pipeline/utils.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline copying nipype/pipeline/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline copying nipype/pipeline/engine.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline copying nipype/pipeline/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/sge.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/pbs.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/multiproc.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/linear.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/ipythonxi.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/ipython.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/base.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/tmpdirs.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/spm_docs.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/onetime.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/misc.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/matlabtools.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/logger.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/ipy_profile_nipype.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/filemanip.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/docparse.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/config.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/testing copying nipype/testing/utils.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing copying nipype/testing/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing copying nipype/testing/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows copying nipype/workflows/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows copying nipype/workflows/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/preprocess.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/estimate.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/dti.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows/freesurfer copying nipype/workflows/freesurfer/utils.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/freesurfer copying nipype/workflows/freesurfer/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/freesurfer copying nipype/workflows/freesurfer/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/freesurfer creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows/spm copying nipype/workflows/spm/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/spm copying nipype/workflows/spm/preprocess.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/spm copying nipype/workflows/spm/estimate.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/spm copying nipype/workflows/spm/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/spm creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows/camino copying nipype/workflows/camino/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/camino copying nipype/workflows/camino/diffusion.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/camino copying nipype/workflows/camino/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/camino creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/external copying nipype/external/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/external copying nipype/external/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/external creating /build/nipype-GvmI5_/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/utils.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/setupscons.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/setup.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/numpytest.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/nulltester.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/nosetester.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/noseclasses.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/decorators.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/__init__.py -> /build/nipype-GvmI5_/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting touch debian/python-module-stampdir/python-nipype mkdir -p build echo "backend : Agg" >| build/matplotlibrc : # TODO: We need to set matplotlib backend to Agg before building... export PYTHONPATH=$PWD MPLCONFIGDIR=/build/nipype-GvmI5_/nipype-0.4.1/build; cd doc; /usr/bin/make html make[1]: Entering directory `/build/nipype-GvmI5_/nipype-0.4.1/doc' python ../tools/ex2rst \ --project Nipype \ --outdir /build/nipype-GvmI5_/nipype-0.4.1/doc/users/examples \ ../examples/freesurfer_tutorial.py \ ../examples/fsl_tutorial2.py \ ../examples/fsl_feeds_tutorial.py \ ../examples/spm_tutorial.py \ ../examples/spm_face_tutorial.py \ ../examples/spm_auditory_tutorial.py \ ../examples/fsl_dti_tutorial.py \ ../examples/camino_dti_tutorial.py \ ../examples/connectivity_tutorial.py \ ../examples/dtk_dti_tutorial.py \ ../examples/dtk_odf_tutorial.py \ ../examples/spm_tutorial2.py \ ../examples/spm_dartel_tutorial.py \ ../examples/dartmouth_workshop_2010.py \ ../examples/nipy_tutorial.py examples2rst finished. rm -rf api/generated #python ../tools/build_modref_templates.py rm -rf interfaces/generated python ../tools/build_interface_docs.py /usr/lib/pymodules/python2.6/matplotlib/__init__.py:890: UserWarning: This call to matplotlib.use() has no effect because the the backend has already been chosen; matplotlib.use() must be called *before* pylab, matplotlib.pyplot, or matplotlib.backends is imported for the first time. if warn: warnings.warn(_use_error_msg) WARNING: Empty - nipype WARNING: Empty - nipype.algorithms CreateNifti Generating inputs/outputs doc for: nipype.algorithms.misc CreateNifti Distance Generating inputs/outputs doc for: nipype.algorithms.misc Distance ModifyAffine Generating inputs/outputs doc for: nipype.algorithms.misc ModifyAffine Overlap Generating inputs/outputs doc for: nipype.algorithms.misc Overlap PickAtlas Generating inputs/outputs doc for: nipype.algorithms.misc PickAtlas SimpleThreshold Generating inputs/outputs doc for: nipype.algorithms.misc SimpleThreshold TSNR Generating inputs/outputs doc for: nipype.algorithms.misc TSNR >>> DEBIAN doc building with missing externals >>>: gcd() takes exactly 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: gen_info() takes exactly 1 argument (0 given) >>> DEBIAN doc building with missing externals >>>: orth() takes exactly 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: scale_timings() takes exactly 4 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: spm_hrf() takes at least 1 argument (0 given) SpecifyModel Generating inputs/outputs doc for: nipype.algorithms.modelgen SpecifyModel SpecifySPMModel Generating inputs/outputs doc for: nipype.algorithms.modelgen SpecifySPMModel SpecifySparseModel Generating inputs/outputs doc for: nipype.algorithms.modelgen SpecifySparseModel SpecifySparseSPMModel 'SpecifySparseSPMModel' ArtifactDetect Generating inputs/outputs doc for: nipype.algorithms.rapidart ArtifactDetect StimulusCorrelation Generating inputs/outputs doc for: nipype.algorithms.rapidart StimulusCorrelation WARNING: Empty - nipype.interfaces WARNING: Empty - nipype.interfaces.afni WARNING: Empty - nipype.interfaces.afni.base WARNING: Empty - nipype.interfaces.afni.preprocess camino setup test camino teardown test WARNING: Empty - nipype.interfaces.camino Conmap Generating inputs/outputs doc for: nipype.interfaces.camino.connectivity Conmap AnalyzeHeader Generating inputs/outputs doc for: nipype.interfaces.camino.convert AnalyzeHeader DT2NIfTI Generating inputs/outputs doc for: nipype.interfaces.camino.convert DT2NIfTI Image2Voxel Generating inputs/outputs doc for: nipype.interfaces.camino.convert Image2Voxel NIfTIDT2Camino Generating inputs/outputs doc for: nipype.interfaces.camino.convert NIfTIDT2Camino ProcStreamlines Generating inputs/outputs doc for: nipype.interfaces.camino.convert ProcStreamlines TractShredder Generating inputs/outputs doc for: nipype.interfaces.camino.convert TractShredder VtkStreamlines Generating inputs/outputs doc for: nipype.interfaces.camino.convert VtkStreamlines ComputeEigensystem Generating inputs/outputs doc for: nipype.interfaces.camino.dti ComputeEigensystem ComputeFractionalAnisotropy Generating inputs/outputs doc for: nipype.interfaces.camino.dti ComputeFractionalAnisotropy ComputeMeanDiffusivity Generating inputs/outputs doc for: nipype.interfaces.camino.dti ComputeMeanDiffusivity ComputeTensorTrace Generating inputs/outputs doc for: nipype.interfaces.camino.dti ComputeTensorTrace DTIFit Generating inputs/outputs doc for: nipype.interfaces.camino.dti DTIFit DTLUTGen Generating inputs/outputs doc for: nipype.interfaces.camino.dti DTLUTGen ModelFit Generating inputs/outputs doc for: nipype.interfaces.camino.dti ModelFit PicoPDFs Generating inputs/outputs doc for: nipype.interfaces.camino.dti PicoPDFs Track Generating inputs/outputs doc for: nipype.interfaces.camino.dti Track TrackBallStick Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackBallStick TrackBayesDirac Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackBayesDirac TrackBootstrap Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackBootstrap TrackDT Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackDT TrackPICo Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackPICo camino2trackvis setup test camino2trackvis teardown test WARNING: Empty - nipype.interfaces.camino2trackvis Camino2Trackvis Generating inputs/outputs doc for: nipype.interfaces.camino2trackvis.convert Camino2Trackvis Trackvis2Camino Generating inputs/outputs doc for: nipype.interfaces.camino2trackvis.convert Trackvis2Camino WARNING: Empty - nipype.interfaces.cmtk >>> DEBIAN doc building with missing externals >>>: cmat() takes exactly 7 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: create_endpoints_array() takes exactly 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: length() takes at least 1 argument (0 given) >>> DEBIAN doc building with missing externals >>>: save_fibers() takes exactly 4 arguments (0 given) CreateMatrix Generating inputs/outputs doc for: nipype.interfaces.cmtk.cmtk CreateMatrix ROIGen Generating inputs/outputs doc for: nipype.interfaces.cmtk.cmtk ROIGen CFFConverter Generating inputs/outputs doc for: nipype.interfaces.cmtk.convert CFFConverter MergeCNetworks Generating inputs/outputs doc for: nipype.interfaces.cmtk.convert MergeCNetworks Dcm2nii Generating inputs/outputs doc for: nipype.interfaces.dcm2nii Dcm2nii WARNING: Empty - nipype.interfaces.diffusion_toolkit Info Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.base Info DTIRecon Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.dti DTIRecon DTITracker Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.dti DTITracker HARDIMat Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.odf HARDIMat ODFRecon Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.odf ODFRecon ODFTracker Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.odf ODFTracker SplineFilter Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.postproc SplineFilter WARNING: Empty - nipype.interfaces.freesurfer Info Generating inputs/outputs doc for: nipype.interfaces.freesurfer.base Info Binarize Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model Binarize Concatenate Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model Concatenate GLMFit Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model GLMFit Label2Vol Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model Label2Vol MRISPreproc Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model MRISPreproc OneSampleTTest Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model OneSampleTTest SegStats Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model SegStats ApplyVolTransform Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess ApplyVolTransform BBRegister Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess BBRegister DICOMConvert Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess DICOMConvert FitMSParams Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess FitMSParams MRIConvert Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess MRIConvert ParseDICOMDir Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess ParseDICOMDir ReconAll Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess ReconAll Resample Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess Resample RobustRegister Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess RobustRegister Smooth Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess Smooth SynthesizeFLASH Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess SynthesizeFLASH UnpackSDICOMDir Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess UnpackSDICOMDir ApplyMask Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils ApplyMask ImageInfo Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils ImageInfo MRIsConvert Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils MRIsConvert SampleToSurface Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils SampleToSurface SurfaceSmooth Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils SurfaceSmooth SurfaceSnapshots Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils SurfaceSnapshots SurfaceTransform Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils SurfaceTransform test setup >>> DEBIAN doc building with missing externals >>>: test teardown WARNING: Empty - nipype.interfaces.fsl Info Generating inputs/outputs doc for: nipype.interfaces.fsl.base Info BEDPOSTX FSL environment variables not set DTIFit FSL environment variables not set DistanceMap FSL environment variables not set EddyCorrect FSL environment variables not set FindTheBiggest FSL environment variables not set MakeDyadicVectors FSL environment variables not set ProbTrackX FSL environment variables not set ProjThresh FSL environment variables not set TractSkeleton FSL environment variables not set VecReg FSL environment variables not set XFibres FSL environment variables not set ApplyMask FSL environment variables not set ApplyMaskInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths ApplyMaskInput BinaryMaths FSL environment variables not set BinaryMathsInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths BinaryMathsInput ChangeDataType FSL environment variables not set ChangeDataTypeInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths ChangeDataTypeInput DilateImage FSL environment variables not set DilateInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths DilateInput ErodeImage FSL environment variables not set ErodeInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths ErodeInput IsotropicSmooth FSL environment variables not set IsotropicSmoothInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths IsotropicSmoothInput KernelInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths KernelInput MathsCommand FSL environment variables not set MathsInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths MathsInput MathsOutput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths MathsOutput MeanImage FSL environment variables not set MeanImageInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths MeanImageInput MultiImageMaths FSL environment variables not set MultiImageMathsInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths MultiImageMathsInput SpatialFilter FSL environment variables not set SpatialFilterInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths SpatialFilterInput TemporalFilter FSL environment variables not set TemporalFilterInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths TemporalFilterInput Threshold FSL environment variables not set UnaryMaths FSL environment variables not set UnaryMathsInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths UnaryMathsInput Cluster FSL environment variables not set ContrastMgr FSL environment variables not set FEAT FSL environment variables not set FEATModel FSL environment variables not set FEATRegister Generating inputs/outputs doc for: nipype.interfaces.fsl.model FEATRegister FILMGLS FSL environment variables not set FLAMEO FSL environment variables not set L2Model Generating inputs/outputs doc for: nipype.interfaces.fsl.model L2Model Level1Design Generating inputs/outputs doc for: nipype.interfaces.fsl.model Level1Design MELODIC FSL environment variables not set MultipleRegressDesign Generating inputs/outputs doc for: nipype.interfaces.fsl.model MultipleRegressDesign Randomise FSL environment variables not set SMM FSL environment variables not set SmoothEstimate FSL environment variables not set ApplyWarp FSL environment variables not set ApplyXfm FSL environment variables not set BET FSL environment variables not set FAST FSL environment variables not set FLIRT FSL environment variables not set FNIRT FSL environment variables not set FUGUE FSL environment variables not set MCFLIRT FSL environment variables not set PRELUDE FSL environment variables not set SUSAN Traceback (most recent call last): FSL environment variables not set File "../tools/build_interface_docs.py", line 49, in SliceTimer FSL environment variables not set ConvertXFM docwriter.write_api_docs(outdir) FSL environment variables not set File "/build/nipype-GvmI5_/nipype-0.4.1/tools/interfacedocgen.py", line 556, in write_api_docs ExtractROI FSL environment variables not set FilterRegressor FSL environment variables not set ImageMaths FSL environment variables not set ImageMeants FSL environment variables not set ImageStats FSL environment variables not set Merge FSL environment variables not set Overlay FSL environment variables not set PlotMotionParams FSL environment variables not set PlotTimeSeries FSL environment variables not set PowerSpectrum FSL environment variables not set Slicer FSL environment variables not set self.write_modules_api(modules,outdir) Smooth File "/build/nipype-GvmI5_/nipype-0.4.1/tools/interfacedocgen.py", line 523, in write_modules_api FSL environment variables not set Split FSL environment variables not set SwapDimensions FSL environment variables not set >>> DEBIAN doc building with missing externals >>>: add_traits() takes at least 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: copytree() takes exactly 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: push_file() takes exactly 5 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: quote_id() takes exactly 1 argument (0 given) >>> DEBIAN doc building with missing externals >>>: unquote_id() takes exactly 1 argument (0 given) DataGrabber Generating inputs/outputs doc for: nipype.interfaces.io DataGrabber DataSink Generating inputs/outputs doc for: nipype.interfaces.io DataSink FreeSurferSource Generating inputs/outputs doc for: nipype.interfaces.io FreeSurferSource IOBase Generating inputs/outputs doc for: nipype.interfaces.io IOBase SQLiteSink api_str = self.generate_api_doc(m) __init__() takes exactly 2 arguments (1 given) File "/build/nipype-GvmI5_/nipype-0.4.1/tools/interfacedocgen.py", line 312, in generate_api_doc XNATSink Generating inputs/outputs doc for: nipype.interfaces.io XNATSink XNATSource Generating inputs/outputs doc for: nipype.interfaces.io XNATSource WARNING: Empty - nipype.interfaces.nipy __import__(uri) File "/build/nipype-GvmI5_/nipype-0.4.1/nipype/interfaces/nipy/__init__.py", line 1, in from model import FitGLM, EstimateContrast File "/build/nipype-GvmI5_/nipype-0.4.1/nipype/interfaces/nipy/model.py", line 9, in import nipy.labs.utils.design_matrix as dm ImportError: No module named design_matrix make[1]: *** [api] Error 1 make[1]: Leaving directory `/build/nipype-GvmI5_/nipype-0.4.1/doc' make: *** [doc-stamp] Error 2 dpkg-buildpackage: error: debian/rules build gave error exit status 2 ──────────────────────────────────────────────────────────────────────────────── Build finished at 20110911-1425 Finished ──────── E: Build failure (dpkg-buildpackage died) ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /var/lib/schroot/mount/lsid64c-3fe12468-d98a-4550-8ed2-9204289ba5fa/build/nipype-GvmI5_ Not cleaning session: cloned chroot in use ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Architecture: amd64 Build-Space: 6552 Build-Time: 5 Distribution: lsid64c Fail-Stage: build Install-Time: 38 Job: nipype_0.4.1-1 Package: nipype Package-Time: 164 Source-Version: 0.4.1-1 Space: 6552 Status: attempted Version: 0.4.1-1 ──────────────────────────────────────────────────────────────────────────────── Finished at 20110911-1425 Build needed 00:02:44, 6552k disc space DC-Message: Failed, but took only 255.519974. Retrying, you never know. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. Requested exclusive mode, but other builds running. sbuild (Debian sbuild) 0.62.2 (05 Apr 2011) on talc-1.nancy.grid5000.fr ╔══════════════════════════════════════════════════════════════════════════════╗ ║ nipype 0.4.1-1 (amd64) 11 Sep 2011 14:30 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: nipype Version: 0.4.1-1 Source Version: 0.4.1-1 Distribution: lsid64c Architecture: amd64 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Ign http://localhost sid InRelease Hit http://localhost sid Release.gpg Hit http://localhost sid Release Ign http://localhost sid/main Sources/DiffIndex Ign http://localhost sid/main amd64 Packages/DiffIndex Ign http://localhost sid/main TranslationIndex Hit http://localhost sid/main Sources Hit http://localhost sid/main amd64 Packages Ign http://localhost sid/main Translation-en Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: binutils cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-bin libc-dev-bin libc6 libc6-dev libgcc1 libgomp1 libquadmath0 libstdc++6 libstdc++6-4.6-dev multiarch-support 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 34.4 MB of archives. After this operation, 1073 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libc6-dev libc-dev-bin libgomp1 gcc-4.6-base libgcc1 cpp-4.6 libquadmath0 libstdc++6-4.6-dev g++-4.6 gcc-4.6 libstdc++6 binutils libc-bin libc6 multiarch-support Authentication warning overridden. Get:1 http://localhost/debian/ sid/main libc6-dev amd64 2.13-20 [2637 kB] Get:2 http://localhost/debian/ sid/main libc-dev-bin amd64 2.13-20 [217 kB] Get:3 http://localhost/debian/ sid/main libgomp1 amd64 4.6.1-10 [25.7 kB] Get:4 http://localhost/debian/ sid/main gcc-4.6-base amd64 4.6.1-10 [135 kB] Get:5 http://localhost/debian/ sid/main libgcc1 amd64 1:4.6.1-10 [42.9 kB] Get:6 http://localhost/debian/ sid/main cpp-4.6 amd64 4.6.1-10 [4816 kB] Get:7 http://localhost/debian/ sid/main libquadmath0 amd64 4.6.1-10 [126 kB] Get:8 http://localhost/debian/ sid/main libstdc++6-4.6-dev amd64 4.6.1-10 [1660 kB] Get:9 http://localhost/debian/ sid/main g++-4.6 amd64 4.6.1-10 [6952 kB] Get:10 http://localhost/debian/ sid/main gcc-4.6 amd64 4.6.1-10 [7303 kB] Get:11 http://localhost/debian/ sid/main libstdc++6 amd64 4.6.1-10 [337 kB] Get:12 http://localhost/debian/ sid/main binutils amd64 2.21.53.20110910-1 [4844 kB] Get:13 http://localhost/debian/ sid/main libc-bin amd64 2.13-20 [819 kB] Get:14 http://localhost/debian/ sid/main libc6 amd64 2.13-20 [4323 kB] Get:15 http://localhost/debian/ sid/main multiarch-support amd64 2.13-20 [141 kB] Preconfiguring packages ... Fetched 34.4 MB in 0s (62.7 MB/s) (Reading database ... 10788 files and directories currently installed.) Preparing to replace libc6-dev 2.13-18 (using .../libc6-dev_2.13-20_amd64.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-dev-bin 2.13-18 (using .../libc-dev-bin_2.13-20_amd64.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libgomp1 4.6.1-9 (using .../libgomp1_4.6.1-10_amd64.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.6-base 4.6.1-9 (using .../gcc-4.6-base_4.6.1-10_amd64.deb) ... Unpacking replacement gcc-4.6-base ... Setting up gcc-4.6-base (4.6.1-10) ... (Reading database ... 10788 files and directories currently installed.) Preparing to replace libgcc1 1:4.6.1-9 (using .../libgcc1_1%3a4.6.1-10_amd64.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.6.1-10) ... (Reading database ... 10788 files and directories currently installed.) Preparing to replace cpp-4.6 4.6.1-9 (using .../cpp-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement cpp-4.6 ... Preparing to replace libquadmath0 4.6.1-9 (using .../libquadmath0_4.6.1-10_amd64.deb) ... Unpacking replacement libquadmath0 ... Preparing to replace libstdc++6-4.6-dev 4.6.1-9 (using .../libstdc++6-4.6-dev_4.6.1-10_amd64.deb) ... Unpacking replacement libstdc++6-4.6-dev ... Preparing to replace g++-4.6 4.6.1-9 (using .../g++-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement g++-4.6 ... Preparing to replace gcc-4.6 4.6.1-9 (using .../gcc-4.6_4.6.1-10_amd64.deb) ... Unpacking replacement gcc-4.6 ... Preparing to replace libstdc++6 4.6.1-9 (using .../libstdc++6_4.6.1-10_amd64.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.6.1-10) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace binutils 2.21.53.20110823-3 (using .../binutils_2.21.53.20110910-1_amd64.deb) ... Unpacking replacement binutils ... Preparing to replace libc-bin 2.13-18 (using .../libc-bin_2.13-20_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-20) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace libc6 2.13-18 (using .../libc6_2.13-20_amd64.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.13-20) ... (Reading database ... 10801 files and directories currently installed.) Preparing to replace multiarch-support 2.13-18 (using .../multiarch-support_2.13-20_amd64.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.13-20) ... Setting up libc-dev-bin (2.13-20) ... Setting up libc6-dev (2.13-20) ... Setting up libgomp1 (4.6.1-10) ... Setting up cpp-4.6 (4.6.1-10) ... Setting up libquadmath0 (4.6.1-10) ... Setting up binutils (2.21.53.20110910-1) ... Setting up gcc-4.6 (4.6.1-10) ... Setting up libstdc++6-4.6-dev (4.6.1-10) ... Setting up g++-4.6 (4.6.1-10) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... NOTICE: 'nipype' packaging is maintained in the 'Git' version control system at: git://git.debian.org/git/pkg-exppsy/nipype.git Need to get 942 kB of source archives. Get:1 http://localhost/debian/ sid/main nipype 0.4.1-1 (dsc) [1656 B] Get:2 http://localhost/debian/ sid/main nipype 0.4.1-1 (tar) [934 kB] Get:3 http://localhost/debian/ sid/main nipype 0.4.1-1 (diff) [6504 B] Fetched 942 kB in 0s (43.5 MB/s) Download complete and in download only mode Check arch ────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/build/nipype-RtdIgQ/resolver-fF5Ibs/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/702 B of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! sbuild-build-depends-core-dummy Authentication warning overridden. Selecting previously deselected package sbuild-build-depends-core-dummy. (Reading database ... 10801 files and directories currently installed.) Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Cannot open /var/lib/schroot/mount/lsid64c-7fa812a1-2572-4aa0-8034-d0b48bf99aea/etc/lsb-release: No such file or directory Merged Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 7), python-support (>= 0.6), python (>= 2.6), python-setuptools (>= 0.6), python-sphinx (>= 0.6), python-nose, python-simplejson, python-traits (>= 4.0) | python-traits4, python-scipy, python-matplotlib, python-sympy, python-nibabel (>= 1.0.0~), python-nitime, python-nipy (>= 0.1.2+20101206-1~), python-networkx (>= 1.3), python-cfflib, graphviz, ipython Merged Build-Conflicts: python-networkx (<= 1.0~rc1~) Filtered Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 7), python-support (>= 0.6), python (>= 2.6), python-setuptools (>= 0.6), python-sphinx (>= 0.6), python-nose, python-simplejson, python-traits (>= 4.0), python-scipy, python-matplotlib, python-sympy, python-nibabel (>= 1.0.0~), python-nitime, python-nipy (>= 0.1.2+20101206-1~), python-networkx (>= 1.3), python-cfflib, graphviz, ipython Filtered Build-Conflicts: python-networkx (<= 1.0~rc1~) dpkg-deb: building package `sbuild-build-depends-nipype-dummy' in `/build/nipype-RtdIgQ/resolver-fqchyk/apt_archive/sbuild-build-depends-nipype-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install nipype build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils cdbs debhelper docutils-common file fontconfig fontconfig-config gettext gettext-base gir1.2-glib-2.0 graphviz groff-base html2text intltool-debian ipython libamd2.2.0 libatk1.0-0 libatk1.0-data libavahi-client3 libavahi-common-data libavahi-common3 libblas3gf libcairo2 libcdt4 libcgraph5 libcroco3 libcups2 libdatrie1 libdb4.8 libdbus-1-3 libexpat1 libfontconfig1 libfreetype6 libgcrypt11 libgd2-noxpm libgdk-pixbuf2.0-0 libgfortran3 libgirepository-1.0-1 libglib2.0-0 libgnutls26 libgpg-error0 libgraph4 libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libgvc5 libgvpr1 libice6 libjasper1 libjpeg62 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3gf libmagic1 libp11-kit0 libpango1.0-0 libpathplan4 libpcre3 libpipeline1 libpixman-1-0 libpng12-0 libsm6 libsqlite3-0 libssl1.0.0 libtasn1-3 libthai-data libthai0 libtiff4 libumfpack5.4.0 libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxslt1.1 libxss1 libxt6 man-db mime-support po-debconf python python-cairo python-central python-cfflib python-dateutil python-docutils python-gobject python-jinja2 python-lxml python-markupsafe python-matplotlib python-matplotlib-data python-minimal python-networkx python-nibabel python-nipy python-nipy-lib python-nitime python-nose python-numpy python-pexpect python-pkg-resources python-pygments python-pyparsing python-roman python-scipy python-setuptools python-simplejson python-sphinx python-support python-sympy python-traits python-tz python2.6 python2.6-minimal shared-mime-info tcl8.5 tk8.5 ttf-dejavu-core ttf-lyx ucf x11-common Suggested packages: wamerican wordlist whois vacation devscripts dh-make defoma gettext-doc gsfonts graphviz-doc groff python-gtk2 python-profiler python-qt3 python-qt4 cups-common rng-tools libgd-tools gnutls-bin krb5-doc krb5-user librsvg2-common gvfs libjasper-runtime ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp www-browser libmail-box-perl python-doc python-tk texlive-latex-recommended texlive-latex-base texlive-lang-french python-gobject-dbg python-jinja2-doc python-lxml-dbg dvipng python-configobj python-excelerator python-matplotlib-doc texlive-extra-utils texlive-latex-extra python-nibabel-doc python-mvpa python-coverage python-numpy-doc python-numpy-dbg python-dev gfortran python-distribute python-distribute-doc ttf-bitstream-vera jsmath python-traitsui python2.6-doc binfmt-support tclreadline Recommended packages: autotools-dev curl wget lynx-cur autopoint ttf-liberation global python-foolscap python-openssl python-twisted-core python-wxgtk2.8 python-zope.interface dbus libglib2.0-data hicolor-icon-theme libgtk2.0-bin javascript-common x-ttcidfont-conf xml-core libmail-sendmail-perl python-tables python-h5py python-imaging libpaper-utils docutils-doc python-gobject-cairo python-glade2 python-pygraphviz python-pydot python-yaml python-dicom mayavi2 python-chardet python-ctypes xterm x-terminal-emulator The following NEW packages will be installed: bsdmainutils cdbs debhelper docutils-common file fontconfig fontconfig-config gettext gettext-base gir1.2-glib-2.0 graphviz groff-base html2text intltool-debian ipython libamd2.2.0 libatk1.0-0 libatk1.0-data libavahi-client3 libavahi-common-data libavahi-common3 libblas3gf libcairo2 libcdt4 libcgraph5 libcroco3 libcups2 libdatrie1 libdb4.8 libdbus-1-3 libexpat1 libfontconfig1 libfreetype6 libgcrypt11 libgd2-noxpm libgdk-pixbuf2.0-0 libgfortran3 libgirepository-1.0-1 libglib2.0-0 libgnutls26 libgpg-error0 libgraph4 libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libgvc5 libgvpr1 libice6 libjasper1 libjpeg62 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3gf libmagic1 libp11-kit0 libpango1.0-0 libpathplan4 libpcre3 libpipeline1 libpixman-1-0 libpng12-0 libsm6 libsqlite3-0 libssl1.0.0 libtasn1-3 libthai-data libthai0 libtiff4 libumfpack5.4.0 libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxslt1.1 libxss1 libxt6 man-db mime-support po-debconf python python-cairo python-central python-cfflib python-dateutil python-docutils python-gobject python-jinja2 python-lxml python-markupsafe python-matplotlib python-matplotlib-data python-minimal python-networkx python-nibabel python-nipy python-nipy-lib python-nitime python-nose python-numpy python-pexpect python-pkg-resources python-pygments python-pyparsing python-roman python-scipy python-setuptools python-simplejson python-sphinx python-support python-sympy python-traits python-tz python2.6 python2.6-minimal sbuild-build-depends-nipype-dummy shared-mime-info tcl8.5 tk8.5 ttf-dejavu-core ttf-lyx ucf x11-common 0 upgraded, 147 newly installed, 0 to remove and 0 not upgraded. Need to get 94.1 MB/94.1 MB of archives. After this operation, 295 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpipeline1 libssl1.0.0 libgpg-error0 libgcrypt11 libp11-kit0 libtasn1-3 libgnutls26 libkeyutils1 libkrb5support0 libk5crypto3 libkrb5-3 libgssapi-krb5-2 libpcre3 libglib2.0-0 libatk1.0-data libatk1.0-0 libavahi-common-data libavahi-common3 libdbus-1-3 libavahi-client3 libcups2 libdatrie1 libexpat1 libfreetype6 ucf ttf-dejavu-core fontconfig-config libfontconfig1 libjpeg8 libjasper1 libpng12-0 libjpeg62 libtiff4 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libgdk-pixbuf2.0-0 libgfortran3 libgtk2.0-common libpixman-1-0 libxcb-render0 libxcb-shm0 libxrender1 libcairo2 libthai-data libthai0 libxft2 fontconfig libpango1.0-0 libxcomposite1 libxfixes3 libxcursor1 libxdamage1 libxext6 libxi6 libxinerama1 libxrandr2 libxml2 shared-mime-info libgtk2.0-0 x11-common libice6 libsm6 libxss1 libxt6 libdb4.8 bsdmainutils groff-base man-db libmagic1 file gettext-base libsqlite3-0 mime-support python2.6-minimal python2.6 python-minimal python python-central python-support html2text libcroco3 libunistring0 gettext intltool-debian po-debconf debhelper cdbs docutils-common libgirepository-1.0-1 gir1.2-glib-2.0 libcdt4 libcgraph5 libgd2-noxpm libgraph4 libpathplan4 libxdot4 libgvc5 libgvpr1 libxmu6 libxpm4 libxaw7 graphviz python-pexpect ipython libamd2.2.0 libblas3gf libjs-jquery libjs-underscore libjs-sphinxdoc liblapack3gf libumfpack5.4.0 libxslt1.1 python-cairo python-dateutil python-roman python-docutils python-gobject python-markupsafe python-jinja2 python-lxml ttf-lyx python-matplotlib-data python-numpy python-pyparsing python-tz tcl8.5 tk8.5 python-matplotlib python-networkx python-pkg-resources python-nose python-pygments python-setuptools python-simplejson python-sphinx python-sympy python-traits python-scipy python-nibabel python-cfflib python-nipy-lib python-nipy python-nitime sbuild-build-depends-nipype-dummy Authentication warning overridden. Get:1 http://localhost/debian/ sid/main libpipeline1 amd64 1.2.0-3 [37.9 kB] Get:2 http://localhost/debian/ sid/main libssl1.0.0 amd64 1.0.0e-2 [1143 kB] Get:3 http://localhost/debian/ sid/main libgpg-error0 amd64 1.10-1 [66.6 kB] Get:4 http://localhost/debian/ sid/main libgcrypt11 amd64 1.5.0-3 [298 kB] Get:5 http://localhost/debian/ sid/main libp11-kit0 amd64 0.4-2 [45.2 kB] Get:6 http://localhost/debian/ sid/main libtasn1-3 amd64 2.9-4 [63.9 kB] Get:7 http://localhost/debian/ sid/main libgnutls26 amd64 2.12.10-1 [784 kB] Get:8 http://localhost/debian/ sid/main libkeyutils1 amd64 1.5.2-2 [8860 B] Get:9 http://localhost/debian/ sid/main libkrb5support0 amd64 1.9.1+dfsg-2 [47.1 kB] Get:10 http://localhost/debian/ sid/main libk5crypto3 amd64 1.9.1+dfsg-2 [111 kB] Get:11 http://localhost/debian/ sid/main libkrb5-3 amd64 1.9.1+dfsg-2 [381 kB] Get:12 http://localhost/debian/ sid/main libgssapi-krb5-2 amd64 1.9.1+dfsg-2 [147 kB] Get:13 http://localhost/debian/ sid/main libpcre3 amd64 8.12-4 [225 kB] Get:14 http://localhost/debian/ sid/main libglib2.0-0 amd64 2.28.6-1 [1648 kB] Get:15 http://localhost/debian/ sid/main libatk1.0-data all 2.0.1-2 [215 kB] Get:16 http://localhost/debian/ sid/main libatk1.0-0 amd64 2.0.1-2 [93.0 kB] Get:17 http://localhost/debian/ sid/main libavahi-common-data amd64 0.6.30-5 [131 kB] Get:18 http://localhost/debian/ sid/main libavahi-common3 amd64 0.6.30-5 [54.0 kB] Get:19 http://localhost/debian/ sid/main libdbus-1-3 amd64 1.4.14-1 [163 kB] Get:20 http://localhost/debian/ sid/main libavahi-client3 amd64 0.6.30-5 [58.8 kB] Get:21 http://localhost/debian/ sid/main libcups2 amd64 1.5.0-5 [248 kB] Get:22 http://localhost/debian/ sid/main libdatrie1 amd64 0.2.4-3 [27.6 kB] Get:23 http://localhost/debian/ sid/main libexpat1 amd64 2.0.1-7 [137 kB] Get:24 http://localhost/debian/ sid/main libfreetype6 amd64 2.4.6-2 [435 kB] Get:25 http://localhost/debian/ sid/main ucf all 3.0025+nmu2 [70.6 kB] Get:26 http://localhost/debian/ sid/main ttf-dejavu-core all 2.33-2 [1552 kB] Get:27 http://localhost/debian/ sid/main fontconfig-config all 2.8.0-3 [221 kB] Get:28 http://localhost/debian/ sid/main libfontconfig1 amd64 2.8.0-3 [282 kB] Get:29 http://localhost/debian/ sid/main libjpeg8 amd64 8c-2 [132 kB] Get:30 http://localhost/debian/ sid/main libjasper1 amd64 1.900.1-10 [159 kB] Get:31 http://localhost/debian/ sid/main libpng12-0 amd64 1.2.46-3 [188 kB] Get:32 http://localhost/debian/ sid/main libjpeg62 amd64 6b1-2 [94.1 kB] Get:33 http://localhost/debian/ sid/main libtiff4 amd64 3.9.5-1 [200 kB] Get:34 http://localhost/debian/ sid/main libxau6 amd64 1:1.0.6-3 [17.0 kB] Get:35 http://localhost/debian/ sid/main libxdmcp6 amd64 1:1.1.0-3 [22.9 kB] Get:36 http://localhost/debian/ sid/main libxcb1 amd64 1.7-3 [45.4 kB] Get:37 http://localhost/debian/ sid/main libx11-data all 2:1.4.4-1 [183 kB] Get:38 http://localhost/debian/ sid/main libx11-6 amd64 2:1.4.4-1 [889 kB] Get:39 http://localhost/debian/ sid/main libgdk-pixbuf2.0-0 amd64 2.24.0-1 [666 kB] Get:40 http://localhost/debian/ sid/main libgfortran3 amd64 4.6.1-10 [358 kB] Get:41 http://localhost/debian/ sid/main libgtk2.0-common all 2.24.6-1 [7228 kB] Get:42 http://localhost/debian/ sid/main libpixman-1-0 amd64 0.22.2-1 [356 kB] Get:43 http://localhost/debian/ sid/main libxcb-render0 amd64 1.7-3 [16.3 kB] Get:44 http://localhost/debian/ sid/main libxcb-shm0 amd64 1.7-3 [9458 B] Get:45 http://localhost/debian/ sid/main libxrender1 amd64 1:0.9.6-2 [31.5 kB] Get:46 http://localhost/debian/ sid/main libcairo2 amd64 1.10.2-6.1 [948 kB] Get:47 http://localhost/debian/ sid/main libthai-data all 0.1.15-2 [201 kB] Get:48 http://localhost/debian/ sid/main libthai0 amd64 0.1.15-2 [42.9 kB] Get:49 http://localhost/debian/ sid/main libxft2 amd64 2.2.0-3 [58.1 kB] Get:50 http://localhost/debian/ sid/main fontconfig amd64 2.8.0-3 [334 kB] Get:51 http://localhost/debian/ sid/main libpango1.0-0 amd64 1.28.4-3 [442 kB] Get:52 http://localhost/debian/ sid/main libxcomposite1 amd64 1:0.4.3-2 [16.6 kB] Get:53 http://localhost/debian/ sid/main libxfixes3 amd64 1:5.0-4 [21.5 kB] Get:54 http://localhost/debian/ sid/main libxcursor1 amd64 1:1.1.12-1 [26.8 kB] Get:55 http://localhost/debian/ sid/main libxdamage1 amd64 1:1.1.3-2 [14.3 kB] Get:56 http://localhost/debian/ sid/main libxext6 amd64 2:1.3.0-3 [52.3 kB] Get:57 http://localhost/debian/ sid/main libxi6 amd64 2:1.4.3-3 [66.2 kB] Get:58 http://localhost/debian/ sid/main libxinerama1 amd64 2:1.1.1-3 [15.9 kB] Get:59 http://localhost/debian/ sid/main libxrandr2 amd64 2:1.3.2-2 [33.5 kB] Get:60 http://localhost/debian/ sid/main libxml2 amd64 2.7.8.dfsg-4 [892 kB] Get:61 http://localhost/debian/ sid/main shared-mime-info amd64 0.90-1 [1014 kB] Get:62 http://localhost/debian/ sid/main libgtk2.0-0 amd64 2.24.6-1 [2700 kB] Get:63 http://localhost/debian/ sid/main x11-common all 1:7.6+8 [276 kB] Get:64 http://localhost/debian/ sid/main libice6 amd64 2:1.0.7-2 [56.5 kB] Get:65 http://localhost/debian/ sid/main libsm6 amd64 2:1.2.0-2 [29.8 kB] Get:66 http://localhost/debian/ sid/main libxss1 amd64 1:1.2.1-2 [16.9 kB] Get:67 http://localhost/debian/ sid/main libxt6 amd64 1:1.1.1-2 [207 kB] Get:68 http://localhost/debian/ sid/main libdb4.8 amd64 4.8.30-9 [694 kB] Get:69 http://localhost/debian/ sid/main bsdmainutils amd64 8.2.3 [208 kB] Get:70 http://localhost/debian/ sid/main groff-base amd64 1.21-6 [1150 kB] Get:71 http://localhost/debian/ sid/main man-db amd64 2.6.0.2-2 [1023 kB] Get:72 http://localhost/debian/ sid/main libmagic1 amd64 5.08-1 [246 kB] Get:73 http://localhost/debian/ sid/main file amd64 5.08-1 [51.7 kB] Get:74 http://localhost/debian/ sid/main gettext-base amd64 0.18.1.1-4 [154 kB] Get:75 http://localhost/debian/ sid/main libsqlite3-0 amd64 3.7.7-2 [420 kB] Get:76 http://localhost/debian/ sid/main mime-support all 3.51-1 [35.0 kB] Get:77 http://localhost/debian/ sid/main python2.6-minimal amd64 2.6.7-4 [1524 kB] Get:78 http://localhost/debian/ sid/main python2.6 amd64 2.6.7-4 [2483 kB] Get:79 http://localhost/debian/ sid/main python-minimal all 2.6.7-3 [39.2 kB] Get:80 http://localhost/debian/ sid/main python all 2.6.7-3 [177 kB] Get:81 http://localhost/debian/ sid/main python-central all 0.6.17 [47.8 kB] Get:82 http://localhost/debian/ sid/main python-support all 1.0.14 [33.5 kB] Get:83 http://localhost/debian/ sid/main html2text amd64 1.3.2a-15 [103 kB] Get:84 http://localhost/debian/ sid/main libcroco3 amd64 0.6.2-1 [125 kB] Get:85 http://localhost/debian/ sid/main libunistring0 amd64 0.9.3-4 [437 kB] Get:86 http://localhost/debian/ sid/main gettext amd64 0.18.1.1-4 [2079 kB] Get:87 http://localhost/debian/ sid/main intltool-debian all 0.35.0+20060710.1 [30.8 kB] Get:88 http://localhost/debian/ sid/main po-debconf all 1.0.16+nmu1 [223 kB] Get:89 http://localhost/debian/ sid/main debhelper all 8.9.6 [562 kB] Get:90 http://localhost/debian/ sid/main cdbs all 0.4.96 [75.8 kB] Get:91 http://localhost/debian/ sid/main docutils-common all 0.7-4 [186 kB] Get:92 http://localhost/debian/ sid/main libgirepository-1.0-1 amd64 0.10.8-2 [104 kB] Get:93 http://localhost/debian/ sid/main gir1.2-glib-2.0 amd64 0.10.8-2 [150 kB] Get:94 http://localhost/debian/ sid/main libcdt4 amd64 2.26.3-7 [58.8 kB] Get:95 http://localhost/debian/ sid/main libcgraph5 amd64 2.26.3-7 [87.0 kB] Get:96 http://localhost/debian/ sid/main libgd2-noxpm amd64 2.0.36~rc1~dfsg-5.1+b1 [228 kB] Get:97 http://localhost/debian/ sid/main libgraph4 amd64 2.26.3-7 [73.0 kB] Get:98 http://localhost/debian/ sid/main libpathplan4 amd64 2.26.3-7 [64.2 kB] Get:99 http://localhost/debian/ sid/main libxdot4 amd64 2.26.3-7 [53.4 kB] Get:100 http://localhost/debian/ sid/main libgvc5 amd64 2.26.3-7 [555 kB] Get:101 http://localhost/debian/ sid/main libgvpr1 amd64 2.26.3-7 [243 kB] Get:102 http://localhost/debian/ sid/main libxmu6 amd64 2:1.1.0-2 [63.5 kB] Get:103 http://localhost/debian/ sid/main libxpm4 amd64 1:3.5.9-1 [48.4 kB] Get:104 http://localhost/debian/ sid/main libxaw7 amd64 2:1.0.9-2 [220 kB] Get:105 http://localhost/debian/ sid/main graphviz amd64 2.26.3-7 [374 kB] Get:106 http://localhost/debian/ sid/main python-pexpect all 2.3-1 [165 kB] Get:107 http://localhost/debian/ sid/main ipython all 0.10.2-1 [5503 kB] Get:108 http://localhost/debian/ sid/main libamd2.2.0 amd64 1:3.4.0-2 [29.2 kB] Get:109 http://localhost/debian/ sid/main libblas3gf amd64 1.2.20110419-2 [292 kB] Get:110 http://localhost/debian/ sid/main libjs-jquery all 1.6.2-1 [107 kB] Get:111 http://localhost/debian/ sid/main libjs-underscore all 1.1.6-1 [33.7 kB] Get:112 http://localhost/debian/ sid/main libjs-sphinxdoc all 1.0.7+dfsg-1 [37.4 kB] Get:113 http://localhost/debian/ sid/main liblapack3gf amd64 3.3.1-1 [4437 kB] Get:114 http://localhost/debian/ sid/main libumfpack5.4.0 amd64 1:3.4.0-2 [388 kB] Get:115 http://localhost/debian/ sid/main libxslt1.1 amd64 1.1.26-8 [250 kB] Get:116 http://localhost/debian/ sid/main python-cairo amd64 1.8.8-1+b2 [84.2 kB] Get:117 http://localhost/debian/ sid/main python-dateutil all 1.5-1 [53.8 kB] Get:118 http://localhost/debian/ sid/main python-roman all 0.7-4 [47.9 kB] Get:119 http://localhost/debian/ sid/main python-docutils all 0.7-4 [353 kB] Get:120 http://localhost/debian/ sid/main python-gobject amd64 2.28.6-4 [671 kB] Get:121 http://localhost/debian/ sid/main python-markupsafe amd64 0.15-1 [14.6 kB] Get:122 http://localhost/debian/ sid/main python-jinja2 amd64 2.6-1 [168 kB] Get:123 http://localhost/debian/ sid/main python-lxml amd64 2.3-0.1+b2 [1368 kB] Get:124 http://localhost/debian/ sid/main ttf-lyx all 2.0.1-1 [167 kB] Get:125 http://localhost/debian/ sid/main python-matplotlib-data all 1.0.1-3 [2041 kB] Get:126 http://localhost/debian/ sid/main python-numpy amd64 1:1.5.1-2+b1 [2171 kB] Get:127 http://localhost/debian/ sid/main python-pyparsing all 1.5.2-2 [607 kB] Get:128 http://localhost/debian/ sid/main python-tz all 2010b-1 [43.9 kB] Get:129 http://localhost/debian/ sid/main tcl8.5 amd64 8.5.10-1 [1621 kB] Get:130 http://localhost/debian/ sid/main tk8.5 amd64 8.5.10-1 [1181 kB] Get:131 http://localhost/debian/ sid/main python-matplotlib amd64 1.0.1-3 [6613 kB] Get:132 http://localhost/debian/ sid/main python-networkx all 1.5-2 [679 kB] Get:133 http://localhost/debian/ sid/main python-pkg-resources all 0.6.16-1 [63.3 kB] Get:134 http://localhost/debian/ sid/main python-nose all 1.0.0-1 [371 kB] Get:135 http://localhost/debian/ sid/main python-pygments all 1.4+dfsg-2 [365 kB] Get:136 http://localhost/debian/ sid/main python-setuptools all 0.6.16-1 [223 kB] Get:137 http://localhost/debian/ sid/main python-simplejson amd64 2.2.0-1 [79.1 kB] Get:138 http://localhost/debian/ sid/main python-sphinx all 1.0.7+dfsg-1 [1251 kB] Get:139 http://localhost/debian/ sid/main python-sympy all 0.6.7-1.1 [1693 kB] Get:140 http://localhost/debian/ sid/main python-traits amd64 4.0.0-1 [399 kB] Get:141 http://localhost/debian/ sid/main python-scipy amd64 0.9.0+dfsg1-1+b2 [11.8 MB] Get:142 http://localhost/debian/ sid/main python-nibabel all 1.1.0-1 [1675 kB] Get:143 http://localhost/debian/ sid/main python-cfflib all 2.0.5-1 [217 kB] Get:144 http://localhost/debian/ sid/main python-nipy-lib amd64 0.1.2+201100720-2 [1024 kB] Get:145 http://localhost/debian/ sid/main python-nipy all 0.1.2+201100720-2 [703 kB] Get:146 http://localhost/debian/ sid/main python-nitime all 0.3.1-1 [3902 kB] Extracting templates from packages: 20% Extracting templates from packages: 40% Extracting templates from packages: 61% Extracting templates from packages: 81% Extracting templates from packages: 100% Preconfiguring packages ... Fetched 94.1 MB in 1s (61.2 MB/s) Selecting previously deselected package libpipeline1. (Reading database ... 10801 files and directories currently installed.) Unpacking libpipeline1 (from .../libpipeline1_1.2.0-3_amd64.deb) ... Selecting previously deselected package libssl1.0.0. Unpacking libssl1.0.0 (from .../libssl1.0.0_1.0.0e-2_amd64.deb) ... Selecting previously deselected package libgpg-error0. Unpacking libgpg-error0 (from .../libgpg-error0_1.10-1_amd64.deb) ... Selecting previously deselected package libgcrypt11. Unpacking libgcrypt11 (from .../libgcrypt11_1.5.0-3_amd64.deb) ... Selecting previously deselected package libp11-kit0. Unpacking libp11-kit0 (from .../libp11-kit0_0.4-2_amd64.deb) ... Selecting previously deselected package libtasn1-3. Unpacking libtasn1-3 (from .../libtasn1-3_2.9-4_amd64.deb) ... Selecting previously deselected package libgnutls26. Unpacking libgnutls26 (from .../libgnutls26_2.12.10-1_amd64.deb) ... Selecting previously deselected package libkeyutils1. Unpacking libkeyutils1 (from .../libkeyutils1_1.5.2-2_amd64.deb) ... Selecting previously deselected package libkrb5support0. Unpacking libkrb5support0 (from .../libkrb5support0_1.9.1+dfsg-2_amd64.deb) ... Selecting previously deselected package libk5crypto3. Unpacking libk5crypto3 (from .../libk5crypto3_1.9.1+dfsg-2_amd64.deb) ... Selecting previously deselected package libkrb5-3. Unpacking libkrb5-3 (from .../libkrb5-3_1.9.1+dfsg-2_amd64.deb) ... Selecting previously deselected package libgssapi-krb5-2. Unpacking libgssapi-krb5-2 (from .../libgssapi-krb5-2_1.9.1+dfsg-2_amd64.deb) ... Selecting previously deselected package libpcre3. Unpacking libpcre3 (from .../libpcre3_8.12-4_amd64.deb) ... Selecting previously deselected package libglib2.0-0. Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_amd64.deb) ... Selecting previously deselected package libatk1.0-data. 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Setting up gettext-base (0.18.1.1-4) ... Setting up libsqlite3-0 (3.7.7-2) ... Setting up mime-support (3.51-1) ... Setting up python2.6-minimal (2.6.7-4) ... Setting up python2.6 (2.6.7-4) ... Setting up python-minimal (2.6.7-3) ... Setting up python (2.6.7-3) ... Setting up python-central (0.6.17) ... Setting up python-support (1.0.14) ... Setting up html2text (1.3.2a-15) ... Setting up libcroco3 (0.6.2-1) ... Setting up libunistring0 (0.9.3-4) ... Setting up gettext (0.18.1.1-4) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1) ... Setting up debhelper (8.9.6) ... Setting up cdbs (0.4.96) ... Setting up docutils-common (0.7-4) ... Setting up libgirepository-1.0-1 (0.10.8-2) ... Setting up gir1.2-glib-2.0 (0.10.8-2) ... Setting up libcdt4 (2.26.3-7) ... Setting up libcgraph5 (2.26.3-7) ... Setting up libgd2-noxpm (2.0.36~rc1~dfsg-5.1+b1) ... Setting up libgraph4 (2.26.3-7) ... Setting up libpathplan4 (2.26.3-7) ... Setting up libxdot4 (2.26.3-7) ... Setting up libgvc5 (2.26.3-7) ... Setting up libgvpr1 (2.26.3-7) ... Setting up libxmu6 (2:1.1.0-2) ... Setting up libxpm4 (1:3.5.9-1) ... Setting up libxaw7 (2:1.0.9-2) ... Setting up graphviz (2.26.3-7) ... Setting up python-pexpect (2.3-1) ... Setting up libamd2.2.0 (1:3.4.0-2) ... Setting up libblas3gf (1.2.20110419-2) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up libjs-jquery (1.6.2-1) ... Setting up libjs-underscore (1.1.6-1) ... Setting up libjs-sphinxdoc (1.0.7+dfsg-1) ... Setting up liblapack3gf (3.3.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up libumfpack5.4.0 (1:3.4.0-2) ... Setting up libxslt1.1 (1.1.26-8) ... Setting up python-cairo (1.8.8-1+b2) ... Setting up python-dateutil (1.5-1) ... Setting up python-roman (0.7-4) ... Setting up python-docutils (0.7-4) ... update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2newlatex to provide /usr/bin/rst2newlatex (rst2newlatex) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode. update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode. Setting up python-gobject (2.28.6-4) ... Setting up python-markupsafe (0.15-1) ... Setting up python-jinja2 (2.6-1) ... Setting up python-lxml (2.3-0.1+b2) ... Setting up ttf-lyx (2.0.1-1) ... Setting up python-matplotlib-data (1.0.1-3) ... Setting up python-numpy (1:1.5.1-2+b1) ... Setting up python-pyparsing (1.5.2-2) ... Setting up python-tz (2010b-1) ... Setting up tcl8.5 (8.5.10-1) ... update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode. Setting up tk8.5 (8.5.10-1) ... update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode. Setting up python-networkx (1.5-2) ... Setting up python-pkg-resources (0.6.16-1) ... Setting up python-nose (1.0.0-1) ... Setting up python-pygments (1.4+dfsg-2) ... Setting up python-setuptools (0.6.16-1) ... Setting up python-simplejson (2.2.0-1) ... Setting up python-sphinx (1.0.7+dfsg-1) ... Setting up python-sympy (0.6.7-1.1) ... Setting up python-traits (4.0.0-1) ... Setting up python-scipy (0.9.0+dfsg1-1+b2) ... Setting up python-nibabel (1.1.0-1) ... Setting up python-cfflib (2.0.5-1) ... Setting up python-nipy-lib (0.1.2+201100720-2) ... Setting up python-nipy (0.1.2+201100720-2) ... Setting up python-nitime (0.3.1-1) ... Processing triggers for python-central ... Setting up python-matplotlib (1.0.1-3) ... Setting up ipython (0.10.2-1) ... Setting up sbuild-build-depends-nipype-dummy (0.invalid.0) ... Processing triggers for python-support ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 2.6.32-5-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.21.53.20110910-1 dpkg-dev_1.16.0.3 g++-4.6_4.6.1-10 gcc-4.6_4.6.1-10 libc6-dev_2.13-20 libstdc++6_4.6.1-10 libstdc++6-4.6-dev_4.6.1-10 linux-libc-dev_3.0.0-3 Package versions: apt_0.8.15.6 apt-utils_0.8.15.6 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binutils_2.21.53.20110910-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.5-7 cdbs_0.4.96 clang_2.9-11 coreutils_8.5-1 cpp_4:4.6.1-2 cpp-4.6_4.6.1-10 dash_0.5.7-1 debconf_1.5.41 debfoster_2.7-1.1 debhelper_8.9.6 debian-archive-keyring_2010.08.28 debianutils_4.0.2 diffutils_1:3.0-1 docutils-common_0.7-4 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.42~WIP-2011-07-02-1 e2fsprogs_1.42~WIP-2011-07-02-1 fakeroot_1.18-1 file_5.08-1 findutils_4.4.2-1+b1 fontconfig_2.8.0-3 fontconfig-config_2.8.0-3 g++_4:4.6.1-2 g++-4.6_4.6.1-10 gcc_4:4.6.1-2 gcc-4.6_4.6.1-10 gcc-4.6-base_4.6.1-10 gettext_0.18.1.1-4 gettext-base_0.18.1.1-4 gir1.2-glib-2.0_0.10.8-2 gnupg_1.4.11-3 gpgv_1.4.11-3 graphviz_2.26.3-7 grep_2.9-2 groff-base_1.21-6 gzip_1.4-1 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.11 insserv_1.14.0-2.1 install-info_4.13a.dfsg.1-8 intltool-debian_0.35.0+20060710.1 ipython_0.10.2-1 less_444-1 libacl1_2.2.51-3 libamd2.2.0_1:3.4.0-2 libatk1.0-0_2.0.1-2 libatk1.0-data_2.0.1-2 libattr1_1:2.4.46-3 libavahi-client3_0.6.30-5 libavahi-common-data_0.6.30-5 libavahi-common3_0.6.30-5 libblas3gf_1.2.20110419-2 libblkid1_2.19.1-5 libbz2-1.0_1.0.5-7 libc-bin_2.13-20 libc-dev-bin_2.13-20 libc6_2.13-20 libc6-dev_2.13-20 libcairo2_1.10.2-6.1 libcdt4_2.26.3-7 libcgraph5_2.26.3-7 libcomerr2_1.42~WIP-2011-07-02-1 libcroco3_0.6.2-1 libcups2_1.5.0-5 libdatrie1_0.2.4-3 libdb4.8_4.8.30-9 libdb5.1_5.1.25-11 libdbus-1-3_1.4.14-1 libdpkg-perl_1.16.0.3 libexpat1_2.0.1-7 libffi5_3.0.10~rc10-3 libfontconfig1_2.8.0-3 libfreetype6_2.4.6-2 libgc1c2_1:7.1-8 libgcc1_1:4.6.1-10 libgcrypt11_1.5.0-3 libgd2-noxpm_2.0.36~rc1~dfsg-5.1+b1 libgdbm3_1.8.3-10 libgdk-pixbuf2.0-0_2.24.0-1 libgfortran3_4.6.1-10 libgirepository-1.0-1_0.10.8-2 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.2+dfsg-1 libgnutls26_2.12.10-1 libgomp1_4.6.1-10 libgpg-error0_1.10-1 libgraph4_2.26.3-7 libgssapi-krb5-2_1.9.1+dfsg-2 libgtk2.0-0_2.24.6-1 libgtk2.0-common_2.24.6-1 libgvc5_2.26.3-7 libgvpr1_2.26.3-7 libice6_2:1.0.7-2 libjasper1_1.900.1-10 libjpeg62_6b1-2 libjpeg8_8c-2 libjs-jquery_1.6.2-1 libjs-sphinxdoc_1.0.7+dfsg-1 libjs-underscore_1.1.6-1 libk5crypto3_1.9.1+dfsg-2 libkeyutils1_1.5.2-2 libkrb5-3_1.9.1+dfsg-2 libkrb5support0_1.9.1+dfsg-2 liblapack3gf_3.3.1-1 libllvm2.9_2.9+dfsg-3 liblzma2_5.1.1alpha+20110809-2 libmagic1_5.08-1 libmount1_2.19.1-5 libmpc2_0.9-3 libmpfr4_3.0.1-6 libncurses5_5.9-1 libncursesw5_5.9-1 libp11-kit0_0.4-2 libpam-modules_1.1.3-2 libpam-modules-bin_1.1.3-2 libpam-runtime_1.1.3-2 libpam0g_1.1.3-2 libpango1.0-0_1.28.4-3 libpathplan4_2.26.3-7 libpcre3_8.12-4 libpipeline1_1.2.0-3 libpixman-1-0_0.22.2-1 libpng12-0_1.2.46-3 libquadmath0_4.6.1-10 libreadline6_6.2-4 libselinux1_2.1.0-1 libsepol1_2.1.0-1.1 libslang2_2.2.4-3 libsm6_2:1.2.0-2 libsqlite3-0_3.7.7-2 libss2_1.42~WIP-2011-07-02-1 libssl1.0.0_1.0.0e-2 libstdc++6_4.6.1-10 libstdc++6-4.6-dev_4.6.1-10 libtasn1-3_2.9-4 libthai-data_0.1.15-2 libthai0_0.1.15-2 libtiff4_3.9.5-1 libtimedate-perl_1.2000-1 libumfpack5.4.0_1:3.4.0-2 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-19 libuuid1_2.19.1-5 libx11-6_2:1.4.4-1 libx11-data_2:1.4.4-1 libxau6_1:1.0.6-3 libxaw7_2:1.0.9-2 libxcb-render0_1.7-3 libxcb-shm0_1.7-3 libxcb1_1.7-3 libxcomposite1_1:0.4.3-2 libxcursor1_1:1.1.12-1 libxdamage1_1:1.1.3-2 libxdmcp6_1:1.1.0-3 libxdot4_2.26.3-7 libxext6_2:1.3.0-3 libxfixes3_1:5.0-4 libxft2_2.2.0-3 libxi6_2:1.4.3-3 libxinerama1_2:1.1.1-3 libxml2_2.7.8.dfsg-4 libxmu6_2:1.1.0-2 libxpm4_1:3.5.9-1 libxrandr2_2:1.3.2-2 libxrender1_1:0.9.6-2 libxslt1.1_1.1.26-8 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.0.0-3 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-2 mawk_1.3.3-15 mime-support_3.51-1 mount_2.19.1-5 multiarch-support_2.13-20 ncurses-base_5.9-1 ncurses-bin_5.9-1 nvi_1.81.6-8.2 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.12.4-4 perl-base_5.12.4-4 perl-modules_5.12.4-4 po-debconf_1.0.16+nmu1 python_2.6.7-3 python-cairo_1.8.8-1+b2 python-central_0.6.17 python-cfflib_2.0.5-1 python-dateutil_1.5-1 python-docutils_0.7-4 python-gobject_2.28.6-4 python-jinja2_2.6-1 python-lxml_2.3-0.1+b2 python-markupsafe_0.15-1 python-matplotlib_1.0.1-3 python-matplotlib-data_1.0.1-3 python-minimal_2.6.7-3 python-networkx_1.5-2 python-nibabel_1.1.0-1 python-nipy_0.1.2+201100720-2 python-nipy-lib_0.1.2+201100720-2 python-nitime_0.3.1-1 python-nose_1.0.0-1 python-numpy_1:1.5.1-2+b1 python-pexpect_2.3-1 python-pkg-resources_0.6.16-1 python-pygments_1.4+dfsg-2 python-pyparsing_1.5.2-2 python-roman_0.7-4 python-scipy_0.9.0+dfsg1-1+b2 python-setuptools_0.6.16-1 python-simplejson_2.2.0-1 python-sphinx_1.0.7+dfsg-1 python-support_1.0.14 python-sympy_0.6.7-1.1 python-traits_4.0.0-1 python-tz_2010b-1 python2.6_2.6.7-4 python2.6-minimal_2.6.7-4 readline-common_6.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-nipype-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 shared-mime-info_0.90-1 sysv-rc_2.88dsf-13.11 sysvinit_2.88dsf-13.11 sysvinit-utils_2.88dsf-13.11 tar_1.26-2 tcl8.5_8.5.10-1 tk8.5_8.5.10-1 ttf-dejavu-core_2.33-2 ttf-lyx_2.0.1-1 tzdata_2011i-2 ucf_3.0025+nmu2 util-linux_2.19.1-5 x11-common_1:7.6+8 xz-utils_5.1.1alpha+20110809-2 zlib1g_1:1.2.3.4.dfsg-3 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/var/lib/sbuild/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Sun Jul 17 18:27:18 2011 CEST using DSA key ID 75C024C8 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./nipype_0.4.1-1.dsc dpkg-source: info: extracting nipype in nipype-0.4.1 dpkg-source: info: unpacking nipype_0.4.1.orig.tar.gz dpkg-source: info: unpacking nipype_0.4.1-1.debian.tar.gz dpkg-source: info: applying deb_tollerate_exceptions_while_docbuilding Check disc space ──────────────── Sufficient free space for build dpkg-buildpackage ───────────────── dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: source package nipype dpkg-buildpackage: source version 0.4.1-1 dpkg-source --before-build nipype-0.4.1 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions test -x debian/rules dh_testroot dh_clean cd . && \ python setup.py clean \ -a /usr/lib/python2.6/distutils/dist.py:266: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) /build/nipype-RtdIgQ/nipype-0.4.1/nipype/__init__.py:94: UserWarning: Running the tests from the install directory may trigger some failures warnings.warn('Running the tests from the install directory may ' running clean 'build/lib.linux-x86_64-2.6' does not exist -- can't clean it 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts.linux-x86_64-2.6' does not exist -- can't clean it rm -rf debian/python-module-stampdir find "/build/nipype-RtdIgQ/nipype-0.4.1" -name '*.py[co]' -delete find "/build/nipype-RtdIgQ/nipype-0.4.1" -name __pycache__ -type d -empty -delete find "/build/nipype-RtdIgQ/nipype-0.4.1" -prune -name '*.egg-info' -exec rm -rf '{}' ';' rm -rf build pypeline.log /usr/bin/make -C doc clean make[1]: Entering directory `/build/nipype-RtdIgQ/nipype-0.4.1/doc' rm -rf _build/* *~ api/generated documentation.zip make[1]: Leaving directory `/build/nipype-RtdIgQ/nipype-0.4.1/doc' dpkg-source -b nipype-0.4.1 dpkg-source: info: using source format `3.0 (quilt)' dpkg-source: info: building nipype using existing ./nipype_0.4.1.orig.tar.gz dpkg-source: info: building nipype in nipype_0.4.1-1.debian.tar.gz dpkg-source: info: building nipype in nipype_0.4.1-1.dsc debian/rules build pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions test -x debian/rules mkdir -p "." /usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable mkdir -p debian/python-module-stampdir cd . && \ python setup.py build \ --build-base="/build/nipype-RtdIgQ/nipype-0.4.1/./build" /usr/lib/python2.6/distutils/dist.py:266: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) /build/nipype-RtdIgQ/nipype-0.4.1/nipype/__init__.py:94: UserWarning: Running the tests from the install directory may trigger some failures warnings.warn('Running the tests from the install directory may ' running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_py creating /build/nipype-RtdIgQ/nipype-0.4.1/build creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6 creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype copying nipype/version.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype copying nipype/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype copying nipype/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/rapidart.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/modelgen.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/misc.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms copying nipype/algorithms/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/algorithms creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/utility.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/traits_extension.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/slicer.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/rest.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/pymvpa.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/matlab.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/io.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/dcm2nii.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/base.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces copying nipype/interfaces/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/afni copying nipype/interfaces/afni/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/afni copying nipype/interfaces/afni/preprocess.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/afni copying nipype/interfaces/afni/base.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/afni copying nipype/interfaces/afni/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/afni creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/dti.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/convert.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/connectivity.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino copying nipype/interfaces/camino/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/camino2trackvis copying nipype/interfaces/camino2trackvis/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino2trackvis copying nipype/interfaces/camino2trackvis/convert.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino2trackvis copying nipype/interfaces/camino2trackvis/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/camino2trackvis creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk copying nipype/interfaces/cmtk/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk copying nipype/interfaces/cmtk/convert.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk copying nipype/interfaces/cmtk/cmtk.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk copying nipype/interfaces/cmtk/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/cmtk creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/postproc.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/odf.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/dti.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/base.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit copying nipype/interfaces/diffusion_toolkit/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/diffusion_toolkit creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/utils.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/preprocess.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/model.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/base.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer copying nipype/interfaces/freesurfer/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/freesurfer creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/utils.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/preprocess.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/model.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/maths.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/dti.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/base.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl copying nipype/interfaces/fsl/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/fsl creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/nipy copying nipype/interfaces/nipy/preprocess.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/nipy copying nipype/interfaces/nipy/model.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/nipy copying nipype/interfaces/nipy/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/nipy creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/utils.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/preprocess.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/model.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/base.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm copying nipype/interfaces/spm/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/interfaces/spm creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/pipeline copying nipype/pipeline/utils.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline copying nipype/pipeline/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline copying nipype/pipeline/engine.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline copying nipype/pipeline/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/sge.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/pbs.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/multiproc.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/linear.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/ipythonxi.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/ipython.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/base.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins copying nipype/pipeline/plugins/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/pipeline/plugins creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/tmpdirs.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/spm_docs.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/onetime.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/misc.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/matlabtools.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/logger.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/ipy_profile_nipype.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/filemanip.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/docparse.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/config.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils copying nipype/utils/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/utils creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/testing copying nipype/testing/utils.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing copying nipype/testing/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing copying nipype/testing/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows copying nipype/workflows/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows copying nipype/workflows/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/preprocess.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/estimate.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/dti.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl copying nipype/workflows/fsl/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/fsl creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows/freesurfer copying nipype/workflows/freesurfer/utils.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/freesurfer copying nipype/workflows/freesurfer/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/freesurfer copying nipype/workflows/freesurfer/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/freesurfer creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows/spm copying nipype/workflows/spm/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/spm copying nipype/workflows/spm/preprocess.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/spm copying nipype/workflows/spm/estimate.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/spm copying nipype/workflows/spm/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/spm creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/workflows/camino copying nipype/workflows/camino/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/camino copying nipype/workflows/camino/diffusion.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/camino copying nipype/workflows/camino/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/workflows/camino creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/external copying nipype/external/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/external copying nipype/external/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/external creating /build/nipype-RtdIgQ/nipype-0.4.1/build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/utils.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/setupscons.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/setup.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/numpytest.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/nulltester.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/nosetester.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/noseclasses.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/decorators.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting copying nipype/testing/numpytesting/__init__.py -> /build/nipype-RtdIgQ/nipype-0.4.1/./build/lib.linux-x86_64-2.6/nipype/testing/numpytesting touch debian/python-module-stampdir/python-nipype mkdir -p build echo "backend : Agg" >| build/matplotlibrc : # TODO: We need to set matplotlib backend to Agg before building... export PYTHONPATH=$PWD MPLCONFIGDIR=/build/nipype-RtdIgQ/nipype-0.4.1/build; cd doc; /usr/bin/make html make[1]: Entering directory `/build/nipype-RtdIgQ/nipype-0.4.1/doc' python ../tools/ex2rst \ --project Nipype \ --outdir /build/nipype-RtdIgQ/nipype-0.4.1/doc/users/examples \ ../examples/freesurfer_tutorial.py \ ../examples/fsl_tutorial2.py \ ../examples/fsl_feeds_tutorial.py \ ../examples/spm_tutorial.py \ ../examples/spm_face_tutorial.py \ ../examples/spm_auditory_tutorial.py \ ../examples/fsl_dti_tutorial.py \ ../examples/camino_dti_tutorial.py \ ../examples/connectivity_tutorial.py \ ../examples/dtk_dti_tutorial.py \ ../examples/dtk_odf_tutorial.py \ ../examples/spm_tutorial2.py \ ../examples/spm_dartel_tutorial.py \ ../examples/dartmouth_workshop_2010.py \ ../examples/nipy_tutorial.py examples2rst finished. rm -rf api/generated #python ../tools/build_modref_templates.py rm -rf interfaces/generated python ../tools/build_interface_docs.py /usr/lib/pymodules/python2.6/matplotlib/__init__.py:890: UserWarning: This call to matplotlib.use() has no effect because the the backend has already been chosen; matplotlib.use() must be called *before* pylab, matplotlib.pyplot, or matplotlib.backends is imported for the first time. if warn: warnings.warn(_use_error_msg) WARNING: Empty - nipype WARNING: Empty - nipype.algorithms CreateNifti Generating inputs/outputs doc for: nipype.algorithms.misc CreateNifti Distance Generating inputs/outputs doc for: nipype.algorithms.misc Distance ModifyAffine Generating inputs/outputs doc for: nipype.algorithms.misc ModifyAffine Overlap Generating inputs/outputs doc for: nipype.algorithms.misc Overlap PickAtlas Generating inputs/outputs doc for: nipype.algorithms.misc PickAtlas SimpleThreshold Generating inputs/outputs doc for: nipype.algorithms.misc SimpleThreshold TSNR Generating inputs/outputs doc for: nipype.algorithms.misc TSNR >>> DEBIAN doc building with missing externals >>>: gcd() takes exactly 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: gen_info() takes exactly 1 argument (0 given) >>> DEBIAN doc building with missing externals >>>: orth() takes exactly 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: scale_timings() takes exactly 4 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: spm_hrf() takes at least 1 argument (0 given) SpecifyModel Generating inputs/outputs doc for: nipype.algorithms.modelgen SpecifyModel SpecifySPMModel Generating inputs/outputs doc for: nipype.algorithms.modelgen SpecifySPMModel SpecifySparseModel Generating inputs/outputs doc for: nipype.algorithms.modelgen SpecifySparseModel SpecifySparseSPMModel 'SpecifySparseSPMModel' ArtifactDetect Generating inputs/outputs doc for: nipype.algorithms.rapidart ArtifactDetect StimulusCorrelation Generating inputs/outputs doc for: nipype.algorithms.rapidart StimulusCorrelation WARNING: Empty - nipype.interfaces WARNING: Empty - nipype.interfaces.afni WARNING: Empty - nipype.interfaces.afni.base WARNING: Empty - nipype.interfaces.afni.preprocess camino setup test camino teardown test WARNING: Empty - nipype.interfaces.camino Conmap Generating inputs/outputs doc for: nipype.interfaces.camino.connectivity Conmap AnalyzeHeader Generating inputs/outputs doc for: nipype.interfaces.camino.convert AnalyzeHeader DT2NIfTI Generating inputs/outputs doc for: nipype.interfaces.camino.convert DT2NIfTI Image2Voxel Generating inputs/outputs doc for: nipype.interfaces.camino.convert Image2Voxel NIfTIDT2Camino Generating inputs/outputs doc for: nipype.interfaces.camino.convert NIfTIDT2Camino ProcStreamlines Generating inputs/outputs doc for: nipype.interfaces.camino.convert ProcStreamlines TractShredder Generating inputs/outputs doc for: nipype.interfaces.camino.convert TractShredder VtkStreamlines Generating inputs/outputs doc for: nipype.interfaces.camino.convert VtkStreamlines ComputeEigensystem Generating inputs/outputs doc for: nipype.interfaces.camino.dti ComputeEigensystem ComputeFractionalAnisotropy Generating inputs/outputs doc for: nipype.interfaces.camino.dti ComputeFractionalAnisotropy ComputeMeanDiffusivity Generating inputs/outputs doc for: nipype.interfaces.camino.dti ComputeMeanDiffusivity ComputeTensorTrace Generating inputs/outputs doc for: nipype.interfaces.camino.dti ComputeTensorTrace DTIFit Generating inputs/outputs doc for: nipype.interfaces.camino.dti DTIFit DTLUTGen Generating inputs/outputs doc for: nipype.interfaces.camino.dti DTLUTGen ModelFit Generating inputs/outputs doc for: nipype.interfaces.camino.dti ModelFit PicoPDFs Generating inputs/outputs doc for: nipype.interfaces.camino.dti PicoPDFs Track Generating inputs/outputs doc for: nipype.interfaces.camino.dti Track TrackBallStick Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackBallStick TrackBayesDirac Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackBayesDirac TrackBootstrap Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackBootstrap TrackDT Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackDT TrackPICo Generating inputs/outputs doc for: nipype.interfaces.camino.dti TrackPICo camino2trackvis setup test camino2trackvis teardown test WARNING: Empty - nipype.interfaces.camino2trackvis Camino2Trackvis Generating inputs/outputs doc for: nipype.interfaces.camino2trackvis.convert Camino2Trackvis Trackvis2Camino Generating inputs/outputs doc for: nipype.interfaces.camino2trackvis.convert Trackvis2Camino WARNING: Empty - nipype.interfaces.cmtk >>> DEBIAN doc building with missing externals >>>: cmat() takes exactly 7 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: create_endpoints_array() takes exactly 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: length() takes at least 1 argument (0 given) >>> DEBIAN doc building with missing externals >>>: save_fibers() takes exactly 4 arguments (0 given) CreateMatrix Generating inputs/outputs doc for: nipype.interfaces.cmtk.cmtk CreateMatrix ROIGen Generating inputs/outputs doc for: nipype.interfaces.cmtk.cmtk ROIGen CFFConverter Generating inputs/outputs doc for: nipype.interfaces.cmtk.convert CFFConverter MergeCNetworks Generating inputs/outputs doc for: nipype.interfaces.cmtk.convert MergeCNetworks Dcm2nii Generating inputs/outputs doc for: nipype.interfaces.dcm2nii Dcm2nii WARNING: Empty - nipype.interfaces.diffusion_toolkit Info Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.base Info DTIRecon Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.dti DTIRecon DTITracker Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.dti DTITracker HARDIMat Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.odf HARDIMat ODFRecon Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.odf ODFRecon ODFTracker Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.odf ODFTracker SplineFilter Generating inputs/outputs doc for: nipype.interfaces.diffusion_toolkit.postproc SplineFilter WARNING: Empty - nipype.interfaces.freesurfer Info Generating inputs/outputs doc for: nipype.interfaces.freesurfer.base Info Binarize Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model Binarize Concatenate Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model Concatenate GLMFit Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model GLMFit Label2Vol Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model Label2Vol MRISPreproc Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model MRISPreproc OneSampleTTest Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model OneSampleTTest SegStats Generating inputs/outputs doc for: nipype.interfaces.freesurfer.model SegStats ApplyVolTransform Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess ApplyVolTransform BBRegister Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess BBRegister DICOMConvert Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess DICOMConvert FitMSParams Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess FitMSParams MRIConvert Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess MRIConvert ParseDICOMDir Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess ParseDICOMDir ReconAll Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess ReconAll Resample Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess Resample RobustRegister Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess RobustRegister Smooth Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess Smooth SynthesizeFLASH Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess SynthesizeFLASH UnpackSDICOMDir Generating inputs/outputs doc for: nipype.interfaces.freesurfer.preprocess UnpackSDICOMDir ApplyMask Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils ApplyMask ImageInfo Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils ImageInfo MRIsConvert Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils MRIsConvert SampleToSurface Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils SampleToSurface SurfaceSmooth Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils SurfaceSmooth SurfaceSnapshots Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils SurfaceSnapshots SurfaceTransform Generating inputs/outputs doc for: nipype.interfaces.freesurfer.utils SurfaceTransform test setup >>> DEBIAN doc building with missing externals >>>: test teardown WARNING: Empty - nipype.interfaces.fsl Info Generating inputs/outputs doc for: nipype.interfaces.fsl.base Info BEDPOSTX FSL environment variables not set DTIFit FSL environment variables not set DistanceMap FSL environment variables not set EddyCorrect FSL environment variables not set FindTheBiggest FSL environment variables not set MakeDyadicVectors FSL environment variables not set ProbTrackX FSL environment variables not set ProjThresh FSL environment variables not set TractSkeleton FSL environment variables not set VecReg FSL environment variables not set XFibres FSL environment variables not set ApplyMask FSL environment variables not set ApplyMaskInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths ApplyMaskInput BinaryMaths FSL environment variables not set BinaryMathsInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths BinaryMathsInput ChangeDataType FSL environment variables not set ChangeDataTypeInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths ChangeDataTypeInput DilateImage FSL environment variables not set DilateInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths DilateInput ErodeImage FSL environment variables not set ErodeInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths ErodeInput IsotropicSmooth FSL environment variables not set IsotropicSmoothInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths IsotropicSmoothInput KernelInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths KernelInput MathsCommand FSL environment variables not set MathsInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths MathsInput MathsOutput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths MathsOutput MeanImage FSL environment variables not set MeanImageInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths MeanImageInput MultiImageMaths FSL environment variables not set MultiImageMathsInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths MultiImageMathsInput SpatialFilter FSL environment variables not set SpatialFilterInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths SpatialFilterInput TemporalFilter FSL environment variables not set TemporalFilterInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths TemporalFilterInput Threshold FSL environment variables not set UnaryMaths FSL environment variables not set UnaryMathsInput Generating inputs/outputs doc for: nipype.interfaces.fsl.maths UnaryMathsInput Cluster FSL environment variables not set ContrastMgr FSL environment variables not set FEAT FSL environment variables not set FEATModel FSL environment variables not set FEATRegister Generating inputs/outputs doc for: nipype.interfaces.fsl.model FEATRegister FILMGLS FSL environment variables not set FLAMEO FSL environment variables not set L2Model Generating inputs/outputs doc for: nipype.interfaces.fsl.model L2Model Level1Design Generating inputs/outputs doc for: nipype.interfaces.fsl.model Level1Design MELODIC FSL environment variables not set MultipleRegressDesign Generating inputs/outputs doc for: nipype.interfaces.fsl.model MultipleRegressDesign Randomise FSL environment variables not set SMM FSL environment variables not set SmoothEstimate FSL environment variables not set ApplyWarp FSL environment variables not set ApplyXfm FSL environment variables not set BET FSL environment variables not set FAST FSL environment variables not set FLIRT FSL environment variables not set FNIRT FSL environment variables not set FUGUE FSL environment variables not set MCFLIRT FSL environment variables not set PRELUDE FSL environment variables not set SUSAN Traceback (most recent call last): File "../tools/build_interface_docs.py", line 49, in docwriter.write_api_docs(outdir) File "/build/nipype-RtdIgQ/nipype-0.4.1/tools/interfacedocgen.py", line 556, in write_api_docs FSL environment variables not set SliceTimer FSL environment variables not set ConvertXFM FSL environment variables not set ExtractROI FSL environment variables not set FilterRegressor FSL environment variables not set ImageMaths FSL environment variables not set ImageMeants FSL environment variables not set ImageStats FSL environment variables not set Merge FSL environment variables not set Overlay FSL environment variables not set PlotMotionParams FSL environment variables not set PlotTimeSeries self.write_modules_api(modules,outdir) FSL environment variables not set PowerSpectrum File "/build/nipype-RtdIgQ/nipype-0.4.1/tools/interfacedocgen.py", line 523, in write_modules_api FSL environment variables not set Slicer FSL environment variables not set Smooth FSL environment variables not set Split FSL environment variables not set SwapDimensions FSL environment variables not set >>> DEBIAN doc building with missing externals >>>: add_traits() takes at least 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: copytree() takes exactly 2 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: push_file() takes exactly 5 arguments (0 given) >>> DEBIAN doc building with missing externals >>>: quote_id() takes exactly 1 argument (0 given) >>> DEBIAN doc building with missing externals >>>: unquote_id() takes exactly 1 argument (0 given) DataGrabber Generating inputs/outputs doc for: nipype.interfaces.io DataGrabber DataSink Generating inputs/outputs doc for: nipype.interfaces.io DataSink FreeSurferSource Generating inputs/outputs doc for: nipype.interfaces.io FreeSurferSource api_str = self.generate_api_doc(m) IOBase File "/build/nipype-RtdIgQ/nipype-0.4.1/tools/interfacedocgen.py", line 312, in generate_api_doc Generating inputs/outputs doc for: nipype.interfaces.io IOBase SQLiteSink __init__() takes exactly 2 arguments (1 given) XNATSink Generating inputs/outputs doc for: nipype.interfaces.io XNATSink XNATSource Generating inputs/outputs doc for: nipype.interfaces.io XNATSource WARNING: Empty - nipype.interfaces.nipy __import__(uri) File "/build/nipype-RtdIgQ/nipype-0.4.1/nipype/interfaces/nipy/__init__.py", line 1, in from model import FitGLM, EstimateContrast File "/build/nipype-RtdIgQ/nipype-0.4.1/nipype/interfaces/nipy/model.py", line 9, in import nipy.labs.utils.design_matrix as dm ImportError: No module named design_matrix make[1]: *** [api] Error 1 make: *** [doc-stamp] Error 2 make[1]: Leaving directory `/build/nipype-RtdIgQ/nipype-0.4.1/doc' dpkg-buildpackage: error: debian/rules build gave error exit status 2 ──────────────────────────────────────────────────────────────────────────────── Build finished at 20110911-1431 Finished ──────── E: Build failure (dpkg-buildpackage died) ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /var/lib/schroot/mount/lsid64c-7fa812a1-2572-4aa0-8034-d0b48bf99aea/build/nipype-RtdIgQ Not cleaning session: cloned chroot in use ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Architecture: amd64 Build-Space: 6552 Build-Time: 4 Distribution: lsid64c Fail-Stage: build Install-Time: 26 Job: nipype_0.4.1-1 Package: nipype Package-Time: 41 Source-Version: 0.4.1-1 Space: 6552 Status: attempted Version: 0.4.1-1 ──────────────────────────────────────────────────────────────────────────────── Finished at 20110911-1431 Build needed 00:00:41, 6552k disc space DC-Build-Status: Failed 597.740783s ### Content of /var/log/daemon.log ### Sep 11 13:45:51 talc-1 approx: Concurrent download of debian/dists/sid/main/i18n/Index is taking too long Sep 11 14:23:18 talc-1 approx: Concurrent download of debian/dists/sid/Release.gpg is taking too long Sep 11 14:23:29 talc-1 approx: Concurrent download of debian/dists/sid/Release.gpg is taking too long Sep 11 14:23:39 talc-1 approx: Concurrent download of debian/dists/sid/Release is taking too long Sep 11 14:23:56 talc-1 approx: Concurrent download of debian/dists/sid/Release.gpg is taking too long Sep 11 14:23:56 talc-1 approx: Concurrent download of debian/dists/sid/Release is taking too long Sep 11 14:24:07 talc-1 approx: Concurrent download of debian/dists/sid/Release.gpg is taking too long Sep 11 14:24:21 talc-1 approx: Concurrent download of debian/dists/sid/main/source/Sources.diff/Index is taking too long Sep 11 14:24:37 talc-1 approx: Concurrent download of debian/dists/sid/main/source/Sources.diff/Index is taking too long Sep 11 14:24:50 talc-1 approx: Concurrent download of debian/dists/sid/main/binary-amd64/Packages.diff/Index is taking too long Sep 11 14:27:59 talc-1 approx: Concurrent download of debian/pool/main/c/codenarc/codenarc_0.13.orig.tar.gz is taking too long Sep 11 14:28:59 talc-1 approx: Concurrent download of debian/pool/main/c/codenarc/codenarc_0.13-1.debian.tar.gz is taking too long ### End of content of /var/log/daemon.log ### DC-Time-Estimation: 597.740783 versus expected 56 (r/m: 9.67394255357143 ; m: 56.0) DC-Build-Network: USED. See /tmp/rulesafter.jYDys2 ! ************************************************************ # Generated by iptables-save v1.4.8 on Sun Sep 11 14:31:33 2011 *filter :INPUT ACCEPT [5377177:34541921559] :FORWARD ACCEPT [0:0] :OUTPUT DROP [0:0] :LD - [0:0] [2457405:31501341368] -A OUTPUT -o lo -j ACCEPT [0:0] -A OUTPUT -d 129.88.0.0/16 -j ACCEPT [3:984] -A OUTPUT -d 10.0.0.0/8 -j ACCEPT [0:0] -A OUTPUT -d 192.168.133.0/24 -j ACCEPT [0:0] -A OUTPUT -d 192.168.159.0/24 -j ACCEPT [0:0] -A OUTPUT -d 192.168.160.0/24 -j ACCEPT [0:0] -A OUTPUT -d 10.69.0.0/17 -j ACCEPT [0:0] -A OUTPUT -d 172.28.52.0/22 -j ACCEPT [0:0] -A OUTPUT -d 172.24.0.0/16 -j ACCEPT [0:0] -A OUTPUT -d 131.254.202.0/23 -j ACCEPT [0:0] -A OUTPUT -d 138.96.20.0/22 -j ACCEPT [0:0] -A OUTPUT -d 192.168.22.0/24 -j ACCEPT [937189:150462946] -A OUTPUT -d 172.16.0.0/16 -j ACCEPT [7588:695036] -A OUTPUT -d 224.0.0.0/4 -p udp -j ACCEPT [145:8680] -A OUTPUT -j LD [145:8680] -A LD -j LOG [145:8680] -A LD -j REJECT --reject-with icmp-port-unreachable COMMIT # Completed on Sun Sep 11 14:31:33 2011 ************************************************************ --- /tmp/rulesbefore.0hjMsb 2011-09-11 14:21:35.678392802 +0200 +++ /tmp/rulesafter.jYDys2 2011-09-11 14:31:33.423644002 +0200 @@ -1,10 +1,10 @@ -# Generated by iptables-save v1.4.8 on Sun Sep 11 14:21:35 2011 +# Generated by iptables-save v1.4.8 on Sun Sep 11 14:31:33 2011 *filter -:INPUT ACCEPT [5048121:31899665443] +:INPUT ACCEPT [5377177:34541921559] :FORWARD ACCEPT [0:0] :OUTPUT DROP [0:0] :LD - [0:0] -[2267560:29003068615] -A OUTPUT -o lo -j ACCEPT +[2457405:31501341368] -A OUTPUT -o lo -j ACCEPT [0:0] -A OUTPUT -d 129.88.0.0/16 -j ACCEPT [3:984] -A OUTPUT -d 10.0.0.0/8 -j ACCEPT [0:0] -A OUTPUT -d 192.168.133.0/24 -j ACCEPT @@ -16,10 +16,10 @@ [0:0] -A OUTPUT -d 131.254.202.0/23 -j ACCEPT [0:0] -A OUTPUT -d 138.96.20.0/22 -j ACCEPT [0:0] -A OUTPUT -d 192.168.22.0/24 -j ACCEPT -[885881:140521780] -A OUTPUT -d 172.16.0.0/16 -j ACCEPT -[7199:659928] -A OUTPUT -d 224.0.0.0/4 -p udp -j ACCEPT -[143:8560] -A OUTPUT -j LD -[143:8560] -A LD -j LOG -[143:8560] -A LD -j REJECT --reject-with icmp-port-unreachable +[937189:150462946] -A OUTPUT -d 172.16.0.0/16 -j ACCEPT +[7588:695036] -A OUTPUT -d 224.0.0.0/4 -p udp -j ACCEPT +[145:8680] -A OUTPUT -j LD +[145:8680] -A LD -j LOG +[145:8680] -A LD -j REJECT --reject-with icmp-port-unreachable COMMIT -# Completed on Sun Sep 11 14:21:35 2011 +# Completed on Sun Sep 11 14:31:33 2011 ************************************************************ [10523.167298] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.105 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=50010 DF PROTO=TCP SPT=45202 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10523.256039] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.105 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=32365 DF PROTO=TCP SPT=45203 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10526.253755] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.105 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=50011 DF PROTO=TCP SPT=45202 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10526.345757] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.105 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=32366 DF PROTO=TCP SPT=45203 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10526.437782] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.105 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=11424 DF PROTO=TCP SPT=45204 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10526.526566] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.105 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=22271 DF PROTO=TCP SPT=45205 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10529.524516] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.105 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=11425 DF PROTO=TCP SPT=45204 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10529.613243] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.105 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=22272 DF PROTO=TCP SPT=45205 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10529.702301] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.106 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=19594 DF PROTO=TCP SPT=38933 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10529.791034] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.106 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=4986 DF PROTO=TCP SPT=38934 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10532.788516] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.106 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=19595 DF PROTO=TCP SPT=38933 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10532.877241] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.106 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=4987 DF PROTO=TCP SPT=38934 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10533.048537] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.106 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=54259 DF PROTO=TCP SPT=38935 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10535.636738] IN= OUT=eth0 SRC=172.16.66.1 DST=193.62.203.105 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=15671 DF PROTO=TCP SPT=45209 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [10582.219694] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=32470 DF PROTO=TCP SPT=50957 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10585.305282] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=32471 DF PROTO=TCP SPT=50957 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10587.397804] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=51517 DF PROTO=TCP SPT=50960 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10590.485527] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=51518 DF PROTO=TCP SPT=50960 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10593.574680] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=14825 DF PROTO=TCP SPT=50961 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10596.665029] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=14826 DF PROTO=TCP SPT=50961 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10600.754426] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=18172 DF PROTO=TCP SPT=50962 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10603.845033] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=18173 DF PROTO=TCP SPT=50962 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10605.104721] IN= OUT=eth0 SRC=172.16.66.1 DST=199.212.0.46 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=12785 DF PROTO=TCP SPT=39496 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10608.192781] IN= OUT=eth0 SRC=172.16.66.1 DST=199.212.0.46 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=12786 DF PROTO=TCP SPT=39496 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10610.282308] IN= OUT=eth0 SRC=172.16.66.1 DST=199.71.0.47 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=32746 DF PROTO=TCP SPT=38670 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10613.372291] IN= OUT=eth0 SRC=172.16.66.1 DST=199.71.0.47 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=32747 DF PROTO=TCP SPT=38670 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10616.461890] IN= OUT=eth0 SRC=172.16.66.1 DST=199.71.0.46 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=44434 DF PROTO=TCP SPT=35811 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10619.548780] IN= OUT=eth0 SRC=172.16.66.1 DST=199.71.0.46 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=44435 DF PROTO=TCP SPT=35811 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10623.637514] IN= OUT=eth0 SRC=172.16.66.1 DST=199.212.0.48 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=63294 DF PROTO=TCP SPT=42519 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10626.724280] IN= OUT=eth0 SRC=172.16.66.1 DST=199.212.0.48 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=63295 DF PROTO=TCP SPT=42519 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10627.936988] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=58546 DF PROTO=TCP SPT=50967 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10631.028773] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=58547 DF PROTO=TCP SPT=50967 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10633.122709] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=55667 DF PROTO=TCP SPT=50968 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10636.213281] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=55668 DF PROTO=TCP SPT=50968 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10639.369498] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=56839 DF PROTO=TCP SPT=50969 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10642.456280] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=56840 DF PROTO=TCP SPT=50969 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10646.545737] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=16361 DF PROTO=TCP SPT=50970 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [10649.633522] IN= OUT=eth0 SRC=172.16.66.1 DST=193.0.6.135 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=16362 DF PROTO=TCP SPT=50970 DPT=43 WINDOW=5840 RES=0x00 SYN URGP=0 [11621.001156] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=61868 DF PROTO=TCP SPT=34221 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [11624.088041] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=61869 DF PROTO=TCP SPT=34221 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [11624.207548] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=23211 DF PROTO=TCP SPT=34222 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [11627.292020] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=23212 DF PROTO=TCP SPT=34222 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [11627.403946] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=35019 DF PROTO=TCP SPT=34223 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [11630.492065] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=35020 DF PROTO=TCP SPT=34223 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [11630.603971] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=23268 DF PROTO=TCP SPT=34224 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [11633.688028] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=23269 DF PROTO=TCP SPT=34224 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [11633.800110] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=38794 DF PROTO=TCP SPT=34225 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [11636.888014] IN= OUT=eth0 SRC=172.16.66.1 DST=131.252.210.176 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=38795 DF PROTO=TCP SPT=34225 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [13769.882871] IN= OUT=eth0 SRC=172.16.66.1 DST=188.40.172.6 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=42637 DF PROTO=TCP SPT=34200 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 [13772.969527] IN= OUT=eth0 SRC=172.16.66.1 DST=188.40.172.6 LEN=60 TOS=0x00 PREC=0x00 TTL=64 ID=42638 DF PROTO=TCP SPT=34200 DPT=80 WINDOW=5840 RES=0x00 SYN URGP=0 ************************************************************