DC-Build-Header: elmerfem 6.1.0.svn.5396.dfsg2-4 / 2015-03-26 04:00:55 +0000 DC-Task: source:elmerfem version:6.1.0.svn.5396.dfsg2-4 architecture:any chroot:unstable esttime:1362 logfile:/tmp/elmerfem_6.1.0.svn.5396.dfsg2-4_unstable_clang.log modes:binary-only:parallel:clang DC-Sbuild-call: su user -c 'sbuild -n --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang elmerfem_6.1.0.svn.5396.dfsg2-4' sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on ip-172-31-1-232.us-west-2.compute.internal ╔══════════════════════════════════════════════════════════════════════════════╗ ║ elmerfem 6.1.0.svn.5396.dfsg2-4 (amd64) 26 Mar 2015 04:00 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: elmerfem Version: 6.1.0.svn.5396.dfsg2-4 Source Version: 6.1.0.svn.5396.dfsg2-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/elmerfem-OTnhyc/elmerfem-6.1.0.svn.5396.dfsg2' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/elmerfem-OTnhyc' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/unstable-amd64-sbuild-9387885f-d382-4fc3-b0e2-17c82f8f946b' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Get:1 http://localhost:9999 unstable InRelease [257 kB] Get:2 http://localhost:9999 unstable/main Sources/DiffIndex [7876 B] Get:3 http://localhost:9999 unstable/main amd64 Packages/DiffIndex [7876 B] Get:4 http://localhost:9999 unstable/main Translation-en/DiffIndex [7876 B] Get:5 http://localhost:9999 unstable/main 2015-03-25-1448.37.pdiff [3021 B] Get:6 http://localhost:9999 unstable/main 2015-03-25-2049.47.pdiff [5545 B] Get:7 http://localhost:9999 unstable/main 2015-03-26-0248.39.pdiff [3389 B] Get:8 http://localhost:9999 unstable/main 2015-03-26-0248.39.pdiff [3389 B] Get:9 http://localhost:9999 unstable/main amd64 2015-03-25-1448.37.pdiff [4095 B] Get:10 http://localhost:9999 unstable/main amd64 2015-03-25-2049.47.pdiff [4595 B] Get:11 http://localhost:9999 unstable/main amd64 2015-03-26-0248.39.pdiff [3173 B] Get:12 http://localhost:9999 unstable/main 2015-03-25-2049.47.pdiff [2032 B] Get:13 http://localhost:9999 unstable/main amd64 2015-03-26-0248.39.pdiff [3173 B] Get:14 http://localhost:9999 unstable/main 2015-03-25-2049.47.pdiff [2032 B] Fetched 306 kB in 5s (56.7 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... NOTICE: 'elmerfem' packaging is maintained in the 'Git' version control system at: git://git.debian.org/git/debian-science/packages/elmerfem.git Need to get 24.6 MB of source archives. Get:1 http://localhost:9999/debian/ unstable/main elmerfem 6.1.0.svn.5396.dfsg2-4 (dsc) [2839 B] Get:2 http://localhost:9999/debian/ unstable/main elmerfem 6.1.0.svn.5396.dfsg2-4 (tar) [24.5 MB] Get:3 http://localhost:9999/debian/ unstable/main elmerfem 6.1.0.svn.5396.dfsg2-4 (diff) [15.7 kB] Fetched 24.6 MB in 1s (22.5 MB/s) Download complete and in download only mode Check arch ────────── ┌──────────────────────────────────────────────────────────────────────────────┐ │ Chroot Setup Commands │ └──────────────────────────────────────────────────────────────────────────────┘ /tmp/clang ────────── + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=3.6 + echo 'Install of clang-3.6' Install of clang-3.6 + apt-get update Hit http://localhost:9999 unstable InRelease Get:1 http://localhost:9999 unstable/main Sources/DiffIndex [7876 B] Get:2 http://localhost:9999 unstable/main amd64 Packages/DiffIndex [7876 B] Get:3 http://localhost:9999 unstable/main Translation-en/DiffIndex [7876 B] Fetched 23.6 kB in 2s (11.3 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-3.6 Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: libbsd0 libclang-common-3.6-dev libclang1-3.6 libedit2 libffi6 libllvm3.6 libobjc-4.9-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-3.6-doc Recommended packages: llvm-3.6-dev python The following NEW packages will be installed: clang-3.6 libbsd0 libclang-common-3.6-dev libclang1-3.6 libedit2 libffi6 libllvm3.6 libobjc-4.9-dev libobjc4 0 upgraded, 9 newly installed, 0 to remove and 0 not upgraded. Need to get 39.2 MB of archives. After this operation, 153 MB of additional disk space will be used. Get:1 http://localhost:9999/debian/ unstable/main libbsd0 amd64 0.7.0-2 [67.9 kB] Get:2 http://localhost:9999/debian/ unstable/main libedit2 amd64 3.1-20140620-2 [85.1 kB] Get:3 http://localhost:9999/debian/ unstable/main libffi6 amd64 3.1-2+b2 [20.1 kB] Get:4 http://localhost:9999/debian/ unstable/main libllvm3.6 amd64 1:3.6-2 [8137 kB] Get:5 http://localhost:9999/debian/ unstable/main libobjc4 amd64 4.9.2-10 [112 kB] Get:6 http://localhost:9999/debian/ unstable/main libobjc-4.9-dev amd64 4.9.2-10 [372 kB] Get:7 http://localhost:9999/debian/ unstable/main libclang1-3.6 amd64 1:3.6-2 [3839 kB] Get:8 http://localhost:9999/debian/ unstable/main libclang-common-3.6-dev amd64 1:3.6-2 [706 kB] Get:9 http://localhost:9999/debian/ unstable/main clang-3.6 amd64 1:3.6-2 [25.8 MB] debconf: unable to initialize frontend: Dialog debconf: (Dialog frontend will not work on a dumb terminal, an emacs shell buffer, or without a controlling terminal.) debconf: falling back to frontend: Readline debconf: unable to initialize frontend: Readline debconf: (This frontend requires a controlling tty.) debconf: falling back to frontend: Teletype dpkg-preconfigure: unable to re-open stdin: Fetched 39.2 MB in 1s (35.1 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11980 files and directories currently installed.) Preparing to unpack .../libbsd0_0.7.0-2_amd64.deb ... Unpacking libbsd0:amd64 (0.7.0-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../libedit2_3.1-20140620-2_amd64.deb ... Unpacking libedit2:amd64 (3.1-20140620-2) ... Selecting previously unselected package libffi6:amd64. Preparing to unpack .../libffi6_3.1-2+b2_amd64.deb ... Unpacking libffi6:amd64 (3.1-2+b2) ... Selecting previously unselected package libllvm3.6:amd64. Preparing to unpack .../libllvm3.6_1%3a3.6-2_amd64.deb ... Unpacking libllvm3.6:amd64 (1:3.6-2) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../libobjc4_4.9.2-10_amd64.deb ... Unpacking libobjc4:amd64 (4.9.2-10) ... Selecting previously unselected package libobjc-4.9-dev:amd64. Preparing to unpack .../libobjc-4.9-dev_4.9.2-10_amd64.deb ... Unpacking libobjc-4.9-dev:amd64 (4.9.2-10) ... Selecting previously unselected package libclang1-3.6:amd64. Preparing to unpack .../libclang1-3.6_1%3a3.6-2_amd64.deb ... Unpacking libclang1-3.6:amd64 (1:3.6-2) ... Selecting previously unselected package libclang-common-3.6-dev. Preparing to unpack .../libclang-common-3.6-dev_1%3a3.6-2_amd64.deb ... Unpacking libclang-common-3.6-dev (1:3.6-2) ... Selecting previously unselected package clang-3.6. Preparing to unpack .../clang-3.6_1%3a3.6-2_amd64.deb ... Unpacking clang-3.6 (1:3.6-2) ... Setting up libbsd0:amd64 (0.7.0-2) ... Setting up libedit2:amd64 (3.1-20140620-2) ... Setting up libffi6:amd64 (3.1-2+b2) ... Setting up libllvm3.6:amd64 (1:3.6-2) ... Setting up libobjc4:amd64 (4.9.2-10) ... Setting up libobjc-4.9-dev:amd64 (4.9.2-10) ... Setting up libclang1-3.6:amd64 (1:3.6-2) ... Setting up libclang-common-3.6-dev (1:3.6-2) ... Setting up clang-3.6 (1:3.6-2) ... Processing triggers for libc-bin (2.19-17) ... + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5' + cd /usr/bin + for VERSION in '$VERSIONS' + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-3.6 g++-4.6 + ln -s clang-3.6 gcc-4.6 + ln -s clang-3.6 cpp-4.6 + ln -s clang-3.6 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections + echo 'g++-4.6 hold' + dpkg --set-selections + for VERSION in '$VERSIONS' + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-3.6 g++-4.7 + ln -s clang-3.6 gcc-4.7 + ln -s clang-3.6 cpp-4.7 + ln -s clang-3.6 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections + echo 'g++-4.7 hold' + dpkg --set-selections + for VERSION in '$VERSIONS' + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-3.6 g++-4.8 + ln -s clang-3.6 gcc-4.8 + ln -s clang-3.6 cpp-4.8 + ln -s clang-3.6 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-3.6 g++-4.9 + ln -s clang-3.6 gcc-4.9 + ln -s clang-3.6 cpp-4.9 + ln -s clang-3.6 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections + echo 'g++-4.9 hold' + dpkg --set-selections + for VERSION in '$VERSIONS' + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-3.6 g++-5 + ln -s clang-3.6 gcc-5 + ln -s clang-3.6 cpp-5 + ln -s clang-3.6 gcc + echo 'gcc-5 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-5 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + cd - /«BUILDDIR» + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang'. Finished processing commands. ──────────────────────────────────────────────────────────────────────────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-ZC9RkW/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/820 B of archives. After this operation, 0 B of additional disk space will be used. Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12200 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, init, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 5), quilt, po-debconf, autoconf, automake, gfortran, libblas-dev | libblas.so, liblapack-dev | liblapack-3.so, mpi-default-dev, mpi-default-bin, libhypre-dev, libsuitesparse-dev, libarpack2-dev, libparpack2-dev, libmumps-scotch-dev, libreadline-dev, libncurses5-dev, libx11-dev, tk8.5-dev, tcl8.5-dev, libfreetype6-dev, libftgl-dev, libgl1-mesa-dev | libgl-dev, libglu1-mesa-dev | libglu-dev, libscotchmetis-dev, r-base-core, libpng-dev Merged Build-Conflicts: gcc-multilib, libatlas-base-dev, libatlas3-base, matlab-support Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, init, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 5), quilt, po-debconf, autoconf, automake, gfortran, libblas-dev, liblapack-dev, mpi-default-dev, mpi-default-bin, libhypre-dev, libsuitesparse-dev, libarpack2-dev, libparpack2-dev, libmumps-scotch-dev, libreadline-dev, libncurses5-dev, libx11-dev, tk8.5-dev, tcl8.5-dev, libfreetype6-dev, libftgl-dev, libgl1-mesa-dev, libglu1-mesa-dev, libscotchmetis-dev, r-base-core, libpng-dev Filtered Build-Conflicts: gcc-multilib, libatlas-base-dev, libatlas3-base, matlab-support dpkg-deb: building package `sbuild-build-depends-elmerfem-dummy' in `/«BUILDDIR»/resolver-dUMvAv/apt_archive/sbuild-build-depends-elmerfem-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install elmerfem build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autotools-dev bsdmainutils debhelper diffstat file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-4.9 groff-base intltool-debian libamd2.3.1 libarpack2 libarpack2-dev libasprintf0c2 libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libbtf1.2.0 libcairo2 libcamd2.3.1 libccolamd2.8.0 libcholmod2.1.2 libcolamd2.8.0 libcr0 libcroco3 libcsparse3.1.2 libcxsparse3.1.2 libdatrie1 libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libexpat1 libexpat1-dev libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libftgl-dev libftgl2 libgfortran-4.9-dev libgfortran3 libgl1-mesa-dev libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglu1-mesa libglu1-mesa-dev libgraphite2-3 libharfbuzz0b libhwloc-dev libhwloc5 libhypre-2.8.0b libhypre-dev libibverbs-dev libibverbs1 libice6 libicu52 libjbig0 libjpeg62-turbo libklu1.2.1 liblapack-dev liblapack3 libldl2.1.0 libltdl-dev libltdl7 libmagic1 libmumps-4.10.0 libmumps-dev libmumps-scotch-4.10.0 libmumps-scotch-dev libncurses5-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi1.6 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparpack2 libparpack2-dev libpciaccess0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libpthread-stubs0-dev libreadline-dev libreadline6-dev libscalapack-mpi-dev libscalapack-openmpi1 libscotch-5.1 libscotch-dev libscotchmetis-dev libsigsegv2 libsm6 libspqr1.3.1 libsuitesparse-dev libsuperlu-dev libsuperlu4 libtcl8.5 libtcl8.6 libthai-data libthai0 libtiff5 libtinfo-dev libtk8.5 libtk8.6 libumfpack5.6.2 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxml2 libxrender-dev libxrender1 libxshmfence-dev libxshmfence1 libxss-dev libxss1 libxt6 libxxf86vm-dev libxxf86vm1 m4 man-db mesa-common-dev mpi-default-bin mpi-default-dev openmpi-bin openmpi-common pkg-config po-debconf quilt r-base-core tcl8.5 tcl8.5-dev tk8.5 tk8.5-dev ucf unzip x11-common x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev x11proto-render-dev x11proto-scrnsaver-dev x11proto-xext-dev x11proto-xf86vidmode-dev xdg-utils xorg-sgml-doctools xtrans-dev zip zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation dh-make gettext-doc gfortran-multilib gfortran-doc gfortran-4.9-multilib gfortran-4.9-doc libgfortran3-dbg groff blcr-dkms libhwloc-contrib-plugins libtool-doc ncurses-doc pciutils readline-doc scalapack-doc libsuperlu-doc tcl8.6 tk8.6 libxcb-doc libxext-doc www-browser openmpi-checkpoint libmail-box-perl procmail graphviz default-mta mail-transport-agent ess r-doc-info r-doc-pdf r-mathlib r-base-html tcl-tclreadline tcl8.5-doc tk8.5-doc gvfs-bin Recommended packages: curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev libgl1-mesa-dri libglib2.0-data shared-mime-info xdg-user-dirs libhwloc-plugins libx11-doc xml-core libmail-sendmail-perl r-recommended r-base-dev r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils debhelper diffstat file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-4.9 groff-base intltool-debian libamd2.3.1 libarpack2 libarpack2-dev libasprintf0c2 libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libbtf1.2.0 libcairo2 libcamd2.3.1 libccolamd2.8.0 libcholmod2.1.2 libcolamd2.8.0 libcr0 libcroco3 libcsparse3.1.2 libcxsparse3.1.2 libdatrie1 libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libexpat1 libexpat1-dev libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libftgl-dev libftgl2 libgfortran-4.9-dev libgfortran3 libgl1-mesa-dev libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglu1-mesa libglu1-mesa-dev libgraphite2-3 libharfbuzz0b libhwloc-dev libhwloc5 libhypre-2.8.0b libhypre-dev libibverbs-dev libibverbs1 libice6 libicu52 libjbig0 libjpeg62-turbo libklu1.2.1 liblapack-dev liblapack3 libldl2.1.0 libltdl-dev libltdl7 libmagic1 libmumps-4.10.0 libmumps-dev libmumps-scotch-4.10.0 libmumps-scotch-dev libncurses5-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi1.6 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparpack2 libparpack2-dev libpciaccess0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libpthread-stubs0-dev libreadline-dev libreadline6-dev libscalapack-mpi-dev libscalapack-openmpi1 libscotch-5.1 libscotch-dev libscotchmetis-dev libsigsegv2 libsm6 libspqr1.3.1 libsuitesparse-dev libsuperlu-dev libsuperlu4 libtcl8.5 libtcl8.6 libthai-data libthai0 libtiff5 libtinfo-dev libtk8.5 libtk8.6 libumfpack5.6.2 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxml2 libxrender-dev libxrender1 libxshmfence-dev libxshmfence1 libxss-dev libxss1 libxt6 libxxf86vm-dev libxxf86vm1 m4 man-db mesa-common-dev mpi-default-bin mpi-default-dev openmpi-bin openmpi-common pkg-config po-debconf quilt r-base-core sbuild-build-depends-elmerfem-dummy tcl8.5 tcl8.5-dev tk8.5 tk8.5-dev ucf unzip x11-common x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev x11proto-render-dev x11proto-scrnsaver-dev x11proto-xext-dev x11proto-xf86vidmode-dev xdg-utils xorg-sgml-doctools xtrans-dev zip zlib1g-dev 0 upgraded, 204 newly installed, 0 to remove and 0 not upgraded. Need to get 88.1 MB/88.1 MB of archives. After this operation, 295 MB of additional disk space will be used. Get:1 http://localhost:9999/debian/ unstable/main libpipeline1 amd64 1.4.0-1 [27.9 kB] Get:2 http://localhost:9999/debian/ unstable/main groff-base amd64 1.22.3-1 [1205 kB] Get:3 http://localhost:9999/debian/ unstable/main bsdmainutils amd64 9.0.6 [183 kB] Get:4 http://localhost:9999/debian/ unstable/main man-db amd64 2.7.0.2-5 [1000 kB] Get:5 http://localhost:9999/debian/ unstable/main libasprintf0c2 amd64 0.19.3-2 [31.3 kB] Get:6 http://localhost:9999/debian/ unstable/main libmagic1 amd64 1:5.22+15-2 [249 kB] Get:7 http://localhost:9999/debian/ unstable/main libicu52 amd64 52.1-8 [6780 kB] Get:8 http://localhost:9999/debian/ unstable/main libxml2 amd64 2.9.2+dfsg1-3 [934 kB] Get:9 http://localhost:9999/debian/ unstable/main libexpat1 amd64 2.1.0-6+b3 [80.3 kB] Get:10 http://localhost:9999/debian/ unstable/main libpng12-0 amd64 1.2.50-2+b2 [172 kB] Get:11 http://localhost:9999/debian/ unstable/main libfreetype6 amd64 2.5.2-4 [466 kB] Get:12 http://localhost:9999/debian/ unstable/main ucf all 3.0030 [69.7 kB] Get:13 http://localhost:9999/debian/ unstable/main fonts-dejavu-core all 2.34-1 [1047 kB] Get:14 http://localhost:9999/debian/ unstable/main fontconfig-config all 2.11.0-6.3 [273 kB] Get:15 http://localhost:9999/debian/ unstable/main libfontconfig1 amd64 2.11.0-6.3 [329 kB] Get:16 http://localhost:9999/debian/ unstable/main fontconfig amd64 2.11.0-6.3 [402 kB] Get:17 http://localhost:9999/debian/ unstable/main libamd2.3.1 amd64 1:4.2.1-3 [26.3 kB] Get:18 http://localhost:9999/debian/ unstable/main libbtf1.2.0 amd64 1:4.2.1-3 [12.7 kB] Get:19 http://localhost:9999/debian/ unstable/main libpixman-1-0 amd64 0.32.6-3 [507 kB] Get:20 http://localhost:9999/debian/ unstable/main libxau6 amd64 1:1.0.8-1 [20.7 kB] Get:21 http://localhost:9999/debian/ unstable/main libxdmcp6 amd64 1:1.1.1-1+b1 [24.9 kB] Get:22 http://localhost:9999/debian/ unstable/main libxcb1 amd64 1.10-3+b1 [44.4 kB] Get:23 http://localhost:9999/debian/ unstable/main libx11-data all 2:1.6.2-3 [126 kB] Get:24 http://localhost:9999/debian/ unstable/main libx11-6 amd64 2:1.6.2-3 [729 kB] Get:25 http://localhost:9999/debian/ unstable/main libxcb-render0 amd64 1.10-3+b1 [17.5 kB] Get:26 http://localhost:9999/debian/ unstable/main libxcb-shm0 amd64 1.10-3+b1 [11.5 kB] Get:27 http://localhost:9999/debian/ unstable/main libxext6 amd64 2:1.3.3-1 [52.7 kB] Get:28 http://localhost:9999/debian/ unstable/main libxrender1 amd64 1:0.9.8-1+b1 [31.4 kB] Get:29 http://localhost:9999/debian/ unstable/main libcairo2 amd64 1.14.0-2.1 [742 kB] Get:30 http://localhost:9999/debian/ unstable/main libcamd2.3.1 amd64 1:4.2.1-3 [24.6 kB] Get:31 http://localhost:9999/debian/ unstable/main libccolamd2.8.0 amd64 1:4.2.1-3 [26.0 kB] Get:32 http://localhost:9999/debian/ unstable/main libgfortran3 amd64 4.9.2-10 [255 kB] Get:33 http://localhost:9999/debian/ unstable/main libblas-common amd64 1.2.20110419-10 [8496 B] Get:34 http://localhost:9999/debian/ unstable/main libblas3 amd64 1.2.20110419-10 [167 kB] Get:35 http://localhost:9999/debian/ unstable/main libcolamd2.8.0 amd64 1:4.2.1-3 [20.4 kB] Get:36 http://localhost:9999/debian/ unstable/main liblapack3 amd64 3.5.0-4 [1852 kB] Get:37 http://localhost:9999/debian/ unstable/main libcholmod2.1.2 amd64 1:4.2.1-3 [288 kB] Get:38 http://localhost:9999/debian/ unstable/main libglib2.0-0 amd64 2.42.1-1 [2401 kB] Get:39 http://localhost:9999/debian/ unstable/main libcroco3 amd64 0.6.8-3+b1 [135 kB] Get:40 http://localhost:9999/debian/ unstable/main libcsparse3.1.2 amd64 1:4.2.1-3 [28.2 kB] Get:41 http://localhost:9999/debian/ unstable/main libcxsparse3.1.2 amd64 1:4.2.1-3 [66.0 kB] Get:42 http://localhost:9999/debian/ unstable/main libdatrie1 amd64 0.2.8-1 [32.6 kB] Get:43 http://localhost:9999/debian/ unstable/main libdrm2 amd64 2.4.58-2 [29.9 kB] Get:44 http://localhost:9999/debian/ unstable/main libpciaccess0 amd64 0.13.2-3+b1 [47.6 kB] Get:45 http://localhost:9999/debian/ unstable/main libdrm-intel1 amd64 2.4.58-2 [64.9 kB] Get:46 http://localhost:9999/debian/ unstable/main libdrm-nouveau2 amd64 2.4.58-2 [21.6 kB] Get:47 http://localhost:9999/debian/ unstable/main libdrm-radeon1 amd64 2.4.58-2 [31.1 kB] Get:48 http://localhost:9999/debian/ unstable/main libglapi-mesa amd64 10.4.2-2 [54.3 kB] Get:49 http://localhost:9999/debian/ unstable/main libx11-xcb1 amd64 2:1.6.2-3 [163 kB] Get:50 http://localhost:9999/debian/ unstable/main libxcb-dri2-0 amd64 1.10-3+b1 [12.9 kB] Get:51 http://localhost:9999/debian/ unstable/main libxcb-dri3-0 amd64 1.10-3+b1 [11.1 kB] Get:52 http://localhost:9999/debian/ unstable/main libxcb-glx0 amd64 1.10-3+b1 [27.4 kB] Get:53 http://localhost:9999/debian/ unstable/main libxcb-present0 amd64 1.10-3+b1 [11.1 kB] Get:54 http://localhost:9999/debian/ unstable/main libxcb-sync1 amd64 1.10-3+b1 [14.4 kB] Get:55 http://localhost:9999/debian/ unstable/main libxfixes3 amd64 1:5.0.1-2+b2 [21.3 kB] Get:56 http://localhost:9999/debian/ unstable/main libxdamage1 amd64 1:1.1.4-2+b1 [14.7 kB] Get:57 http://localhost:9999/debian/ unstable/main libxshmfence1 amd64 1.1-4 [6736 B] Get:58 http://localhost:9999/debian/ unstable/main libxxf86vm1 amd64 1:1.1.3-1+b1 [19.6 kB] Get:59 http://localhost:9999/debian/ unstable/main libgl1-mesa-glx amd64 10.4.2-2 [181 kB] Get:60 http://localhost:9999/debian/ unstable/main libglu1-mesa amd64 9.0.0-2 [163 kB] Get:61 http://localhost:9999/debian/ unstable/main libftgl2 amd64 2.1.3~rc5-4+nmu1 [93.2 kB] Get:62 http://localhost:9999/debian/ unstable/main libgraphite2-3 amd64 1.2.4-3 [57.4 kB] Get:63 http://localhost:9999/debian/ unstable/main libharfbuzz0b amd64 0.9.35-2 [485 kB] Get:64 http://localhost:9999/debian/ unstable/main x11-common all 1:7.7+7 [287 kB] Get:65 http://localhost:9999/debian/ unstable/main libice6 amd64 2:1.0.9-1+b1 [58.8 kB] Get:66 http://localhost:9999/debian/ unstable/main libklu1.2.1 amd64 1:4.2.1-3 [75.5 kB] Get:67 http://localhost:9999/debian/ unstable/main libldl2.1.0 amd64 1:4.2.1-3 [12.6 kB] Get:68 http://localhost:9999/debian/ unstable/main libltdl7 amd64 2.4.2-1.11 [45.2 kB] Get:69 http://localhost:9999/debian/ unstable/main libnuma1 amd64 2.0.10-1 [32.5 kB] Get:70 http://localhost:9999/debian/ unstable/main libthai-data all 0.1.21-1 [159 kB] Get:71 http://localhost:9999/debian/ unstable/main libthai0 amd64 0.1.21-1 [46.1 kB] Get:72 http://localhost:9999/debian/ unstable/main libpango-1.0-0 amd64 1.36.8-3 [291 kB] Get:73 http://localhost:9999/debian/ unstable/main libpangoft2-1.0-0 amd64 1.36.8-3 [213 kB] Get:74 http://localhost:9999/debian/ unstable/main libpangocairo-1.0-0 amd64 1.36.8-3 [200 kB] Get:75 http://localhost:9999/debian/ unstable/main libpaper1 amd64 1.1.24+nmu4 [22.0 kB] Get:76 http://localhost:9999/debian/ unstable/main libsigsegv2 amd64 2.10-4+b1 [29.2 kB] Get:77 http://localhost:9999/debian/ unstable/main libsm6 amd64 2:1.2.2-1+b1 [33.6 kB] Get:78 http://localhost:9999/debian/ unstable/main libspqr1.3.1 amd64 1:4.2.1-3 [67.2 kB] Get:79 http://localhost:9999/debian/ unstable/main libsuperlu4 amd64 4.3+dfsg-3 [160 kB] Get:80 http://localhost:9999/debian/ unstable/main libtcl8.5 amd64 8.5.17-1 [737 kB] Get:81 http://localhost:9999/debian/ unstable/main libtcl8.6 amd64 8.6.2+dfsg-2 [978 kB] Get:82 http://localhost:9999/debian/ unstable/main libjbig0 amd64 2.1-3.1 [30.7 kB] Get:83 http://localhost:9999/debian/ unstable/main libjpeg62-turbo amd64 1:1.3.1-12 [116 kB] Get:84 http://localhost:9999/debian/ unstable/main libtiff5 amd64 4.0.3-12.3 [217 kB] Get:85 http://localhost:9999/debian/ unstable/main libxft2 amd64 2.3.2-1 [55.4 kB] Get:86 http://localhost:9999/debian/ unstable/main libxss1 amd64 1:1.2.2-1 [17.5 kB] Get:87 http://localhost:9999/debian/ unstable/main libtk8.5 amd64 8.5.17-1 [749 kB] Get:88 http://localhost:9999/debian/ unstable/main libtk8.6 amd64 8.6.2-1 [771 kB] Get:89 http://localhost:9999/debian/ unstable/main libumfpack5.6.2 amd64 1:4.2.1-3 [222 kB] Get:90 http://localhost:9999/debian/ unstable/main libunistring0 amd64 0.9.3-5.2+b1 [288 kB] Get:91 http://localhost:9999/debian/ unstable/main libxcb-randr0 amd64 1.10-3+b1 [20.9 kB] Get:92 http://localhost:9999/debian/ unstable/main libxcb-shape0 amd64 1.10-3+b1 [11.6 kB] Get:93 http://localhost:9999/debian/ unstable/main libxcb-xfixes0 amd64 1.10-3+b1 [14.9 kB] Get:94 http://localhost:9999/debian/ unstable/main libxt6 amd64 1:1.1.4-1+b1 [186 kB] Get:95 http://localhost:9999/debian/ unstable/main libhwloc5 amd64 1.10.0-3 [86.9 kB] Get:96 http://localhost:9999/debian/ unstable/main file amd64 1:5.22+15-2 [60.1 kB] Get:97 http://localhost:9999/debian/ unstable/main gettext-base amd64 0.19.3-2 [121 kB] Get:98 http://localhost:9999/debian/ unstable/main m4 amd64 1.4.17-4 [254 kB] Get:99 http://localhost:9999/debian/ unstable/main autoconf all 2.69-8 [340 kB] Get:100 http://localhost:9999/debian/ unstable/main autotools-dev all 20140911.1 [70.5 kB] Get:101 http://localhost:9999/debian/ unstable/main automake all 1:1.14.1-4 [725 kB] Get:102 http://localhost:9999/debian/ unstable/main gettext amd64 0.19.3-2 [1240 kB] Get:103 http://localhost:9999/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB] Get:104 http://localhost:9999/debian/ unstable/main po-debconf all 1.0.16+nmu3 [220 kB] Get:105 http://localhost:9999/debian/ unstable/main debhelper all 9.20150101 [813 kB] Get:106 http://localhost:9999/debian/ unstable/main diffstat amd64 1.58-1 [29.4 kB] Get:107 http://localhost:9999/debian/ unstable/main libgfortran-4.9-dev amd64 4.9.2-10 [281 kB] Get:108 http://localhost:9999/debian/ unstable/main gfortran-4.9 amd64 4.9.2-10 [5465 kB] Get:109 http://localhost:9999/debian/ unstable/main gfortran amd64 4:4.9.2-2 [1292 B] Get:110 http://localhost:9999/debian/ unstable/main libarpack2 amd64 3.1.5-3 [97.8 kB] Get:111 http://localhost:9999/debian/ unstable/main libblas-dev amd64 1.2.20110419-10 [163 kB] Get:112 http://localhost:9999/debian/ unstable/main libcr0 amd64 0.8.5-2.2 [32.7 kB] Get:113 http://localhost:9999/debian/ unstable/main libdrm-dev amd64 2.4.58-2 [181 kB] Get:114 http://localhost:9999/debian/ unstable/main libexpat1-dev amd64 2.1.0-6+b3 [126 kB] Get:115 http://localhost:9999/debian/ unstable/main zlib1g-dev amd64 1:1.2.8.dfsg-2+b1 [206 kB] Get:116 http://localhost:9999/debian/ unstable/main libpng12-dev amd64 1.2.50-2+b2 [248 kB] Get:117 http://localhost:9999/debian/ unstable/main libfreetype6-dev amd64 2.5.2-4 [640 kB] Get:118 http://localhost:9999/debian/ unstable/main pkg-config amd64 0.28-1 [57.5 kB] Get:119 http://localhost:9999/debian/ unstable/main libfontconfig1-dev amd64 2.11.0-6.3 [896 kB] Get:120 http://localhost:9999/debian/ unstable/main xorg-sgml-doctools all 1:1.11-1 [21.9 kB] Get:121 http://localhost:9999/debian/ unstable/main x11proto-core-dev all 7.0.26-1 [729 kB] Get:122 http://localhost:9999/debian/ unstable/main libxau-dev amd64 1:1.0.8-1 [23.6 kB] Get:123 http://localhost:9999/debian/ unstable/main libxdmcp-dev amd64 1:1.1.1-1+b1 [40.2 kB] Get:124 http://localhost:9999/debian/ unstable/main x11proto-input-dev all 2.3.1-1 [157 kB] Get:125 http://localhost:9999/debian/ unstable/main x11proto-kb-dev all 1.0.6-2 [269 kB] Get:126 http://localhost:9999/debian/ unstable/main xtrans-dev all 1.3.5-1 [100 kB] Get:127 http://localhost:9999/debian/ unstable/main libpthread-stubs0-dev amd64 0.3-4 [3866 B] Get:128 http://localhost:9999/debian/ unstable/main libxcb1-dev amd64 1.10-3+b1 [83.8 kB] Get:129 http://localhost:9999/debian/ unstable/main libx11-dev amd64 2:1.6.2-3 [800 kB] Get:130 http://localhost:9999/debian/ unstable/main mesa-common-dev amd64 10.4.2-2 [326 kB] Get:131 http://localhost:9999/debian/ unstable/main libx11-xcb-dev amd64 2:1.6.2-3 [165 kB] Get:132 http://localhost:9999/debian/ unstable/main libxcb-dri3-dev amd64 1.10-3+b1 [11.8 kB] Get:133 http://localhost:9999/debian/ unstable/main libxcb-render0-dev amd64 1.10-3+b1 [22.8 kB] Get:134 http://localhost:9999/debian/ unstable/main libxcb-randr0-dev amd64 1.10-3+b1 [26.8 kB] Get:135 http://localhost:9999/debian/ unstable/main libxcb-shape0-dev amd64 1.10-3+b1 [13.1 kB] Get:136 http://localhost:9999/debian/ unstable/main libxcb-xfixes0-dev amd64 1.10-3+b1 [18.1 kB] Get:137 http://localhost:9999/debian/ unstable/main libxcb-sync-dev amd64 1.10-3+b1 [16.7 kB] Get:138 http://localhost:9999/debian/ unstable/main libxcb-present-dev amd64 1.10-3+b1 [12.8 kB] Get:139 http://localhost:9999/debian/ unstable/main libxshmfence-dev amd64 1.1-4 [6124 B] Get:140 http://localhost:9999/debian/ unstable/main libxcb-dri2-0-dev amd64 1.10-3+b1 [15.0 kB] Get:141 http://localhost:9999/debian/ unstable/main libxcb-glx0-dev amd64 1.10-3+b1 [37.8 kB] Get:142 http://localhost:9999/debian/ unstable/main x11proto-xext-dev all 7.3.0-1 [212 kB] Get:143 http://localhost:9999/debian/ unstable/main x11proto-fixes-dev all 1:5.0-2 [19.2 kB] Get:144 http://localhost:9999/debian/ unstable/main libxfixes-dev amd64 1:5.0.1-2+b2 [23.2 kB] Get:145 http://localhost:9999/debian/ unstable/main x11proto-damage-dev all 1:1.2.1-2 [11.8 kB] Get:146 http://localhost:9999/debian/ unstable/main libxdamage-dev amd64 1:1.1.4-2+b1 [14.4 kB] Get:147 http://localhost:9999/debian/ unstable/main libxext-dev amd64 2:1.3.3-1 [107 kB] Get:148 http://localhost:9999/debian/ unstable/main x11proto-xf86vidmode-dev all 2.3.1-2 [6114 B] Get:149 http://localhost:9999/debian/ unstable/main libxxf86vm-dev amd64 1:1.1.3-1+b1 [24.0 kB] Get:150 http://localhost:9999/debian/ unstable/main x11proto-dri2-dev all 2.8-2 [18.2 kB] Get:151 http://localhost:9999/debian/ unstable/main x11proto-gl-dev all 1.4.17-1 [28.0 kB] Get:152 http://localhost:9999/debian/ unstable/main libgl1-mesa-dev amd64 10.4.2-2 [38.2 kB] Get:153 http://localhost:9999/debian/ unstable/main libglu1-mesa-dev amd64 9.0.0-2 [198 kB] Get:154 http://localhost:9999/debian/ unstable/main libftgl-dev amd64 2.1.3~rc5-4+nmu1 [824 kB] Get:155 http://localhost:9999/debian/ unstable/main liblapack-dev amd64 3.5.0-4 [1884 kB] Get:156 http://localhost:9999/debian/ unstable/main libltdl-dev amd64 2.4.2-1.11 [157 kB] Get:157 http://localhost:9999/debian/ unstable/main libtinfo-dev amd64 5.9+20140913-1+b1 [77.1 kB] Get:158 http://localhost:9999/debian/ unstable/main libncurses5-dev amd64 5.9+20140913-1+b1 [175 kB] Get:159 http://localhost:9999/debian/ unstable/main libpaper-utils amd64 1.1.24+nmu4 [17.5 kB] Get:160 http://localhost:9999/debian/ unstable/main libibverbs1 amd64 1.1.8-1 [32.0 kB] Get:161 http://localhost:9999/debian/ unstable/main libopenmpi1.6 amd64 1.6.5-9.2 [1457 kB] Get:162 http://localhost:9999/debian/ unstable/main libparpack2 amd64 3.1.5-3 [151 kB] Get:163 http://localhost:9999/debian/ unstable/main libreadline6-dev amd64 6.3-8+b3 [124 kB] Get:164 http://localhost:9999/debian/ unstable/main libreadline-dev amd64 6.3-8+b3 [1002 B] Get:165 http://localhost:9999/debian/ unstable/main libsuitesparse-dev amd64 1:4.2.1-3 [874 kB] Get:166 http://localhost:9999/debian/ unstable/main libsuperlu-dev amd64 4.3+dfsg-3 [174 kB] Get:167 http://localhost:9999/debian/ unstable/main x11proto-render-dev all 2:0.11.1-2 [20.8 kB] Get:168 http://localhost:9999/debian/ unstable/main libxrender-dev amd64 1:0.9.8-1+b1 [38.9 kB] Get:169 http://localhost:9999/debian/ unstable/main libxft-dev amd64 2.3.2-1 [66.6 kB] Get:170 http://localhost:9999/debian/ unstable/main x11proto-scrnsaver-dev all 1.2.2-1 [25.0 kB] Get:171 http://localhost:9999/debian/ unstable/main libxss-dev amd64 1:1.2.2-1 [22.8 kB] Get:172 http://localhost:9999/debian/ unstable/main quilt all 0.63-3 [312 kB] Get:173 http://localhost:9999/debian/ unstable/main zip amd64 3.0-8 [228 kB] Get:174 http://localhost:9999/debian/ unstable/main unzip amd64 6.0-16 [161 kB] Get:175 http://localhost:9999/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7.4 [65.0 kB] Get:176 http://localhost:9999/debian/ unstable/main r-base-core amd64 3.1.3-1 [20.0 MB] Get:177 http://localhost:9999/debian/ unstable/main tcl8.5 amd64 8.5.17-1 [58.6 kB] Get:178 http://localhost:9999/debian/ unstable/main tcl8.5-dev amd64 8.5.17-1 [716 kB] Get:179 http://localhost:9999/debian/ unstable/main tk8.5 amd64 8.5.17-1 [106 kB] Get:180 http://localhost:9999/debian/ unstable/main tk8.5-dev amd64 8.5.17-1 [755 kB] Get:181 http://localhost:9999/debian/ unstable/main libarpack2-dev amd64 3.1.5-3 [105 kB] Get:182 http://localhost:9999/debian/ unstable/main openmpi-common all 1.6.5-9.2 [110 kB] Get:183 http://localhost:9999/debian/ unstable/main openmpi-bin amd64 1.6.5-9.2 [154 kB] Get:184 http://localhost:9999/debian/ unstable/main mpi-default-bin amd64 1.0.2+nmu2 [3356 B] Get:185 http://localhost:9999/debian/ unstable/main libblacs-openmpi1 amd64 1.1-33 [56.8 kB] Get:186 http://localhost:9999/debian/ unstable/main libibverbs-dev amd64 1.1.8-1 [85.4 kB] Get:187 http://localhost:9999/debian/ unstable/main libnuma-dev amd64 2.0.10-1 [45.3 kB] Get:188 http://localhost:9999/debian/ unstable/main libhwloc-dev amd64 1.10.0-3 [142 kB] Get:189 http://localhost:9999/debian/ unstable/main libopenmpi-dev amd64 1.6.5-9.2 [450 kB] Get:190 http://localhost:9999/debian/ unstable/main mpi-default-dev amd64 1.0.2+nmu2 [3962 B] Get:191 http://localhost:9999/debian/ unstable/main libblacs-mpi-dev amd64 1.1-33 [52.5 kB] Get:192 http://localhost:9999/debian/ unstable/main libhypre-2.8.0b amd64 2.8.0b-2 [1342 kB] Get:193 http://localhost:9999/debian/ unstable/main libhypre-dev all 2.8.0b-2 [134 kB] Get:194 http://localhost:9999/debian/ unstable/main libscalapack-openmpi1 amd64 1.8.0-12.1 [2175 kB] Get:195 http://localhost:9999/debian/ unstable/main libmumps-4.10.0 amd64 4.10.0.dfsg-3+b2 [875 kB] Get:196 http://localhost:9999/debian/ unstable/main libscalapack-mpi-dev amd64 1.8.0-12.1 [2106 kB] Get:197 http://localhost:9999/debian/ unstable/main libmumps-dev amd64 4.10.0.dfsg-3+b2 [798 kB] Get:198 http://localhost:9999/debian/ unstable/main libscotch-5.1 amd64 5.1.12b.dfsg-2+b1 [809 kB] Get:199 http://localhost:9999/debian/ unstable/main libmumps-scotch-4.10.0 amd64 4.10.0.dfsg-3+b2 [884 kB] Get:200 http://localhost:9999/debian/ unstable/main libmumps-scotch-dev amd64 4.10.0.dfsg-3+b2 [795 kB] Get:201 http://localhost:9999/debian/ unstable/main libparpack2-dev amd64 3.1.5-3 [154 kB] Get:202 http://localhost:9999/debian/ unstable/main libscotch-dev amd64 5.1.12b.dfsg-2+b1 [3782 kB] Get:203 http://localhost:9999/debian/ unstable/main libscotchmetis-dev amd64 5.1.12b.dfsg-2+b1 [30.2 kB] Extracting templates from packages: 14% Extracting templates from packages: 29% Extracting templates from packages: 44% Extracting templates from packages: 58% Extracting templates from packages: 73% Extracting templates from packages: 88% Extracting templates from packages: 100% Preconfiguring packages ... Fetched 88.1 MB in 4s (18.0 MB/s) Selecting previously unselected package libpipeline1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12200 files and directories currently installed.) Preparing to unpack .../libpipeline1_1.4.0-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.4.0-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../groff-base_1.22.3-1_amd64.deb ... Unpacking groff-base (1.22.3-1) ... 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Setting up bsdmainutils (9.0.6) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.7.0.2-5) ... Not building database; man-db/auto-update is not 'true'. Setting up libasprintf0c2:amd64 (0.19.3-2) ... Setting up libmagic1:amd64 (1:5.22+15-2) ... Setting up libicu52:amd64 (52.1-8) ... Setting up libxml2:amd64 (2.9.2+dfsg1-3) ... Setting up libexpat1:amd64 (2.1.0-6+b3) ... Setting up libpng12-0:amd64 (1.2.50-2+b2) ... Setting up libfreetype6:amd64 (2.5.2-4) ... Setting up ucf (3.0030) ... Setting up fonts-dejavu-core (2.34-1) ... Setting up fontconfig-config (2.11.0-6.3) ... Setting up libfontconfig1:amd64 (2.11.0-6.3) ... Setting up fontconfig (2.11.0-6.3) ... Regenerating fonts cache... done. Setting up libamd2.3.1:amd64 (1:4.2.1-3) ... Setting up libbtf1.2.0:amd64 (1:4.2.1-3) ... Setting up libpixman-1-0:amd64 (0.32.6-3) ... Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up libxdmcp6:amd64 (1:1.1.1-1+b1) ... Setting up libxcb1:amd64 (1.10-3+b1) ... Setting up libx11-data (2:1.6.2-3) ... Setting up libx11-6:amd64 (2:1.6.2-3) ... Setting up libxcb-render0:amd64 (1.10-3+b1) ... Setting up libxcb-shm0:amd64 (1.10-3+b1) ... Setting up libxext6:amd64 (2:1.3.3-1) ... Setting up libxrender1:amd64 (1:0.9.8-1+b1) ... Setting up libcairo2:amd64 (1.14.0-2.1) ... Setting up libcamd2.3.1:amd64 (1:4.2.1-3) ... Setting up libccolamd2.8.0:amd64 (1:4.2.1-3) ... Setting up libgfortran3:amd64 (4.9.2-10) ... Setting up libblas-common (1.2.20110419-10) ... Setting up libblas3 (1.2.20110419-10) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up libcolamd2.8.0:amd64 (1:4.2.1-3) ... Setting up liblapack3 (3.5.0-4) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libcholmod2.1.2:amd64 (1:4.2.1-3) ... Setting up libglib2.0-0:amd64 (2.42.1-1) ... No schema files found: doing nothing. Setting up libcroco3:amd64 (0.6.8-3+b1) ... Setting up libcsparse3.1.2:amd64 (1:4.2.1-3) ... Setting up libcxsparse3.1.2:amd64 (1:4.2.1-3) ... Setting up libdatrie1:amd64 (0.2.8-1) ... Setting up libdrm2:amd64 (2.4.58-2) ... Setting up libpciaccess0:amd64 (0.13.2-3+b1) ... Setting up libdrm-intel1:amd64 (2.4.58-2) ... Setting up libdrm-nouveau2:amd64 (2.4.58-2) ... Setting up libdrm-radeon1:amd64 (2.4.58-2) ... Setting up libglapi-mesa:amd64 (10.4.2-2) ... Setting up libx11-xcb1:amd64 (2:1.6.2-3) ... Setting up libxcb-dri2-0:amd64 (1.10-3+b1) ... Setting up libxcb-dri3-0:amd64 (1.10-3+b1) ... Setting up libxcb-glx0:amd64 (1.10-3+b1) ... Setting up libxcb-present0:amd64 (1.10-3+b1) ... Setting up libxcb-sync1:amd64 (1.10-3+b1) ... Setting up libxfixes3:amd64 (1:5.0.1-2+b2) ... Setting up libxdamage1:amd64 (1:1.1.4-2+b1) ... Setting up libxshmfence1:amd64 (1.1-4) ... Setting up libxxf86vm1:amd64 (1:1.1.3-1+b1) ... Setting up libgl1-mesa-glx:amd64 (10.4.2-2) ... Setting up libglu1-mesa:amd64 (9.0.0-2) ... Setting up libftgl2:amd64 (2.1.3~rc5-4+nmu1) ... Setting up libgraphite2-3:amd64 (1.2.4-3) ... Setting up libharfbuzz0b:amd64 (0.9.35-2) ... Setting up x11-common (1:7.7+7) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:amd64 (2:1.0.9-1+b1) ... Setting up libklu1.2.1:amd64 (1:4.2.1-3) ... Setting up libldl2.1.0:amd64 (1:4.2.1-3) ... Setting up libltdl7:amd64 (2.4.2-1.11) ... Setting up libnuma1:amd64 (2.0.10-1) ... Setting up libthai-data (0.1.21-1) ... Setting up libthai0:amd64 (0.1.21-1) ... Setting up libpango-1.0-0:amd64 (1.36.8-3) ... Setting up libpangoft2-1.0-0:amd64 (1.36.8-3) ... Setting up libpangocairo-1.0-0:amd64 (1.36.8-3) ... Setting up libpaper1:amd64 (1.1.24+nmu4) ... Creating config file /etc/papersize with new version Setting up libsigsegv2:amd64 (2.10-4+b1) ... Setting up libsm6:amd64 (2:1.2.2-1+b1) ... Setting up libspqr1.3.1:amd64 (1:4.2.1-3) ... Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... Setting up libtcl8.5:amd64 (8.5.17-1) ... Setting up libtcl8.6:amd64 (8.6.2+dfsg-2) ... Setting up libjbig0:amd64 (2.1-3.1) ... Setting up libjpeg62-turbo:amd64 (1:1.3.1-12) ... Setting up libtiff5:amd64 (4.0.3-12.3) ... Setting up libxft2:amd64 (2.3.2-1) ... Setting up libxss1:amd64 (1:1.2.2-1) ... Setting up libtk8.5:amd64 (8.5.17-1) ... Setting up libtk8.6:amd64 (8.6.2-1) ... Setting up libumfpack5.6.2:amd64 (1:4.2.1-3) ... Setting up libunistring0:amd64 (0.9.3-5.2+b1) ... Setting up libxcb-randr0:amd64 (1.10-3+b1) ... Setting up libxcb-shape0:amd64 (1.10-3+b1) ... Setting up libxcb-xfixes0:amd64 (1.10-3+b1) ... Setting up libxt6:amd64 (1:1.1.4-1+b1) ... Setting up libhwloc5:amd64 (1.10.0-3) ... Setting up file (1:5.22+15-2) ... Setting up gettext-base (0.19.3-2) ... Setting up m4 (1.4.17-4) ... Setting up autoconf (2.69-8) ... Setting up autotools-dev (20140911.1) ... Setting up automake (1:1.14.1-4) ... update-alternatives: using /usr/bin/automake-1.14 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.3-2) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu3) ... Setting up debhelper (9.20150101) ... Setting up diffstat (1.58-1) ... Setting up libgfortran-4.9-dev:amd64 (4.9.2-10) ... Setting up gfortran-4.9 (4.9.2-10) ... Setting up gfortran (4:4.9.2-2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libarpack2 (3.1.5-3) ... Setting up libblas-dev (1.2.20110419-10) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libcr0 (0.8.5-2.2) ... Setting up libdrm-dev:amd64 (2.4.58-2) ... Setting up libexpat1-dev:amd64 (2.1.0-6+b3) ... Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-2+b1) ... Setting up libpng12-dev:amd64 (1.2.50-2+b2) ... Setting up libfreetype6-dev (2.5.2-4) ... Setting up pkg-config (0.28-1) ... Setting up libfontconfig1-dev:amd64 (2.11.0-6.3) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up x11proto-core-dev (7.0.26-1) ... Setting up libxau-dev:amd64 (1:1.0.8-1) ... Setting up libxdmcp-dev:amd64 (1:1.1.1-1+b1) ... Setting up x11proto-input-dev (2.3.1-1) ... Setting up x11proto-kb-dev (1.0.6-2) ... Setting up xtrans-dev (1.3.5-1) ... Setting up libpthread-stubs0-dev:amd64 (0.3-4) ... Setting up libxcb1-dev:amd64 (1.10-3+b1) ... Setting up libx11-dev:amd64 (2:1.6.2-3) ... Setting up mesa-common-dev:amd64 (10.4.2-2) ... Setting up libx11-xcb-dev:amd64 (2:1.6.2-3) ... Setting up libxcb-dri3-dev:amd64 (1.10-3+b1) ... Setting up libxcb-render0-dev:amd64 (1.10-3+b1) ... Setting up libxcb-randr0-dev:amd64 (1.10-3+b1) ... Setting up libxcb-shape0-dev:amd64 (1.10-3+b1) ... Setting up libxcb-xfixes0-dev:amd64 (1.10-3+b1) ... Setting up libxcb-sync-dev:amd64 (1.10-3+b1) ... Setting up libxcb-present-dev:amd64 (1.10-3+b1) ... Setting up libxshmfence-dev:amd64 (1.1-4) ... Setting up libxcb-dri2-0-dev:amd64 (1.10-3+b1) ... Setting up libxcb-glx0-dev:amd64 (1.10-3+b1) ... Setting up x11proto-xext-dev (7.3.0-1) ... Setting up x11proto-fixes-dev (1:5.0-2) ... Setting up libxfixes-dev:amd64 (1:5.0.1-2+b2) ... Setting up x11proto-damage-dev (1:1.2.1-2) ... Setting up libxdamage-dev:amd64 (1:1.1.4-2+b1) ... Setting up libxext-dev:amd64 (2:1.3.3-1) ... Setting up x11proto-xf86vidmode-dev (2.3.1-2) ... Setting up libxxf86vm-dev:amd64 (1:1.1.3-1+b1) ... Setting up x11proto-dri2-dev (2.8-2) ... Setting up x11proto-gl-dev (1.4.17-1) ... Setting up libgl1-mesa-dev:amd64 (10.4.2-2) ... Setting up libglu1-mesa-dev (9.0.0-2) ... Setting up libftgl-dev (2.1.3~rc5-4+nmu1) ... Setting up liblapack-dev (3.5.0-4) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libltdl-dev:amd64 (2.4.2-1.11) ... Setting up libtinfo-dev:amd64 (5.9+20140913-1+b1) ... Setting up libncurses5-dev:amd64 (5.9+20140913-1+b1) ... Setting up libpaper-utils (1.1.24+nmu4) ... Setting up libibverbs1 (1.1.8-1) ... Setting up libopenmpi1.6 (1.6.5-9.2) ... Setting up libparpack2 (3.1.5-3) ... Setting up libreadline6-dev:amd64 (6.3-8+b3) ... Setting up libreadline-dev:amd64 (6.3-8+b3) ... Setting up libsuitesparse-dev:amd64 (1:4.2.1-3) ... Setting up libsuperlu-dev:amd64 (4.3+dfsg-3) ... Setting up x11proto-render-dev (2:0.11.1-2) ... Setting up libxrender-dev:amd64 (1:0.9.8-1+b1) ... Setting up libxft-dev (2.3.2-1) ... Setting up x11proto-scrnsaver-dev (1.2.2-1) ... Setting up libxss-dev:amd64 (1:1.2.2-1) ... Setting up quilt (0.63-3) ... Setting up zip (3.0-8) ... Setting up unzip (6.0-16) ... Setting up xdg-utils (1.1.0~rc1+git20111210-7.4) ... Setting up r-base-core (3.1.3-1) ... Creating config file /etc/R/Renviron with new version Setting up tcl8.5 (8.5.17-1) ... Setting up tcl8.5-dev:amd64 (8.5.17-1) ... Setting up tk8.5 (8.5.17-1) ... Setting up tk8.5-dev:amd64 (8.5.17-1) ... Setting up libarpack2-dev (3.1.5-3) ... Setting up openmpi-common (1.6.5-9.2) ... Setting up openmpi-bin (1.6.5-9.2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode Setting up mpi-default-bin (1.0.2+nmu2) ... Setting up libblacs-openmpi1 (1.1-33) ... Setting up libibverbs-dev (1.1.8-1) ... Setting up libnuma-dev:amd64 (2.0.10-1) ... Setting up libhwloc-dev:amd64 (1.10.0-3) ... Setting up libopenmpi-dev (1.6.5-9.2) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up mpi-default-dev (1.0.2+nmu2) ... Setting up libblacs-mpi-dev (1.1-33) ... Setting up libhypre-2.8.0b (2.8.0b-2) ... Setting up libhypre-dev (2.8.0b-2) ... Setting up libscalapack-openmpi1 (1.8.0-12.1) ... Setting up libmumps-4.10.0 (4.10.0.dfsg-3+b2) ... Setting up libscalapack-mpi-dev (1.8.0-12.1) ... Setting up libmumps-dev (4.10.0.dfsg-3+b2) ... Setting up libscotch-5.1 (5.1.12b.dfsg-2+b1) ... Setting up libmumps-scotch-4.10.0 (4.10.0.dfsg-3+b2) ... Setting up libmumps-scotch-dev (4.10.0.dfsg-3+b2) ... Setting up libparpack2-dev (3.1.5-3) ... Setting up libscotch-dev (5.1.12b.dfsg-2+b1) ... Setting up libscotchmetis-dev (5.1.12b.dfsg-2+b1) ... Setting up sbuild-build-depends-elmerfem-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.19-17) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 3.2.0-4-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.25-5 dpkg-dev_1.17.24 g++-4.9_4.9.2-10 gcc-4.9_4.9.2-10 libc6-dev_2.19-17 libstdc++-4.9-dev_4.9.2-10 libstdc++6_4.9.2-10 linux-libc-dev_3.16.7-ckt7-1 Package versions: acl_2.2.52-2 adduser_3.113+nmu3 apt_1.0.9.7 apt-utils_1.0.9.7 autoconf_2.69-8 automake_1:1.14.1-4 autotools-dev_20140911.1 base-files_8 base-passwd_3.5.37 bash_4.3-12 binutils_2.25-5 bsdmainutils_9.0.6 bsdutils_1:2.25.2-5 build-essential_11.7 bzip2_1.0.6-7+b2 clang-3.6_1:3.6-2 coreutils_8.23-4 cpp_4:4.9.2-2 cpp-4.9_4.9.2-10 dash_0.5.7-4+b1 debconf_1.5.56 debfoster_2.7-2 debhelper_9.20150101 debian-archive-keyring_2014.3 debianutils_4.4+b1 diffstat_1.58-1 diffutils_1:3.3-1+b1 dmsetup_2:1.02.90-2.1 dpkg_1.17.24 dpkg-dev_1.17.24 e2fslibs_1.42.12-1.1 e2fsprogs_1.42.12-1.1 fakeroot_1.20.2-1 file_1:5.22+15-2 findutils_4.4.2-9+b1 fontconfig_2.11.0-6.3 fontconfig-config_2.11.0-6.3 fonts-dejavu-core_2.34-1 g++_4:4.9.2-2 g++-4.9_4.9.2-10 gcc_4:4.9.2-2 gcc-4.9_4.9.2-10 gcc-4.9-base_4.9.2-10 gettext_0.19.3-2 gettext-base_0.19.3-2 gfortran_4:4.9.2-2 gfortran-4.9_4.9.2-10 gnupg_1.4.18-7 gpgv_1.4.18-7 grep_2.20-4.1 groff-base_1.22.3-1 gzip_1.6-4 hostname_3.15 init_1.22 initscripts_2.88dsf-58 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 less_458-3 libacl1_2.2.52-2 libamd2.3.1_1:4.2.1-3 libapt-inst1.5_1.0.9.7 libapt-pkg4.12_1.0.9.7 libarpack2_3.1.5-3 libarpack2-dev_3.1.5-3 libasan1_4.9.2-10 libasprintf0c2_0.19.3-2 libatomic1_4.9.2-10 libattr1_1:2.4.47-2 libaudit-common_1:2.4-1 libaudit1_1:2.4-1+b1 libblacs-mpi-dev_1.1-33 libblacs-openmpi1_1.1-33 libblas-common_1.2.20110419-10 libblas-dev_1.2.20110419-10 libblas3_1.2.20110419-10 libblkid1_2.25.2-5 libbsd0_0.7.0-2 libbtf1.2.0_1:4.2.1-3 libbz2-1.0_1.0.6-7+b2 libc-bin_2.19-17 libc-dev-bin_2.19-17 libc6_2.19-17 libc6-dev_2.19-17 libcairo2_1.14.0-2.1 libcamd2.3.1_1:4.2.1-3 libcap2_1:2.24-7 libcap2-bin_1:2.24-7 libccolamd2.8.0_1:4.2.1-3 libcholmod2.1.2_1:4.2.1-3 libcilkrts5_4.9.2-10 libclang-common-3.6-dev_1:3.6-2 libclang1-3.6_1:3.6-2 libcloog-isl4_0.18.2-1+b2 libcolamd2.8.0_1:4.2.1-3 libcomerr2_1.42.12-1.1 libcr0_0.8.5-2.2 libcroco3_0.6.8-3+b1 libcryptsetup4_2:1.6.6-5 libcsparse3.1.2_1:4.2.1-3 libcxsparse3.1.2_1:4.2.1-3 libdatrie1_0.2.8-1 libdb5.3_5.3.28-9 libdebconfclient0_0.192 libdevmapper1.02.1_2:1.02.90-2.1 libdpkg-perl_1.17.24 libdrm-dev_2.4.58-2 libdrm-intel1_2.4.58-2 libdrm-nouveau2_2.4.58-2 libdrm-radeon1_2.4.58-2 libdrm2_2.4.58-2 libedit2_3.1-20140620-2 libexpat1_2.1.0-6+b3 libexpat1-dev_2.1.0-6+b3 libfakeroot_1.20.2-1 libffi6_3.1-2+b2 libfontconfig1_2.11.0-6.3 libfontconfig1-dev_2.11.0-6.3 libfreetype6_2.5.2-4 libfreetype6-dev_2.5.2-4 libftgl-dev_2.1.3~rc5-4+nmu1 libftgl2_2.1.3~rc5-4+nmu1 libgc1c2_1:7.2d-6.4 libgcc-4.9-dev_4.9.2-10 libgcc1_1:4.9.2-10 libgcrypt20_1.6.3-2 libgdbm3_1.8.3-13.1 libgfortran-4.9-dev_4.9.2-10 libgfortran3_4.9.2-10 libgl1-mesa-dev_10.4.2-2 libgl1-mesa-glx_10.4.2-2 libglapi-mesa_10.4.2-2 libglib2.0-0_2.42.1-1 libglu1-mesa_9.0.0-2 libglu1-mesa-dev_9.0.0-2 libgmp10_2:6.0.0+dfsg-6 libgomp1_4.9.2-10 libgpg-error0_1.17-3 libgraphite2-3_1.2.4-3 libharfbuzz0b_0.9.35-2 libhwloc-dev_1.10.0-3 libhwloc5_1.10.0-3 libhypre-2.8.0b_2.8.0b-2 libhypre-dev_2.8.0b-2 libibverbs-dev_1.1.8-1 libibverbs1_1.1.8-1 libice6_2:1.0.9-1+b1 libicu52_52.1-8 libisl10_0.12.2-2 libitm1_4.9.2-10 libjbig0_2.1-3.1 libjpeg62-turbo_1:1.3.1-12 libklu1.2.1_1:4.2.1-3 libkmod2_20-1 liblapack-dev_3.5.0-4 liblapack3_3.5.0-4 libldl2.1.0_1:4.2.1-3 libllvm3.6_1:3.6-2 liblsan0_4.9.2-10 libltdl-dev_2.4.2-1.11 libltdl7_2.4.2-1.11 liblzma5_5.1.1alpha+20120614-2+b3 libmagic1_1:5.22+15-2 libmount1_2.25.2-5 libmpc3_1.0.3-1 libmpfr4_3.1.2-3 libmumps-4.10.0_4.10.0.dfsg-3+b2 libmumps-dev_4.10.0.dfsg-3+b2 libmumps-scotch-4.10.0_4.10.0.dfsg-3+b2 libmumps-scotch-dev_4.10.0.dfsg-3+b2 libncurses5_5.9+20140913-1+b1 libncurses5-dev_5.9+20140913-1+b1 libncursesw5_5.9+20140913-1+b1 libnuma-dev_2.0.10-1 libnuma1_2.0.10-1 libobjc-4.9-dev_4.9.2-10 libobjc4_4.9.2-10 libopenmpi-dev_1.6.5-9.2 libopenmpi1.6_1.6.5-9.2 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpango-1.0-0_1.36.8-3 libpangocairo-1.0-0_1.36.8-3 libpangoft2-1.0-0_1.36.8-3 libpaper-utils_1.1.24+nmu4 libpaper1_1.1.24+nmu4 libparpack2_3.1.5-3 libparpack2-dev_3.1.5-3 libpciaccess0_0.13.2-3+b1 libpcre3_2:8.35-3.3 libpipeline1_1.4.0-1 libpixman-1-0_0.32.6-3 libpng12-0_1.2.50-2+b2 libpng12-dev_1.2.50-2+b2 libprocps3_2:3.3.9-9 libpthread-stubs0-dev_0.3-4 libquadmath0_4.9.2-10 libreadline-dev_6.3-8+b3 libreadline6_6.3-8+b3 libreadline6-dev_6.3-8+b3 libscalapack-mpi-dev_1.8.0-12.1 libscalapack-openmpi1_1.8.0-12.1 libscotch-5.1_5.1.12b.dfsg-2+b1 libscotch-dev_5.1.12b.dfsg-2+b1 libscotchmetis-dev_5.1.12b.dfsg-2+b1 libselinux1_2.3-2 libsemanage-common_2.3-1 libsemanage1_2.3-1+b1 libsepol1_2.3-2 libsigsegv2_2.10-4+b1 libslang2_2.3.0-2 libsm6_2:1.2.2-1+b1 libsmartcols1_2.25.2-5 libspqr1.3.1_1:4.2.1-3 libss2_1.42.12-1.1 libstdc++-4.9-dev_4.9.2-10 libstdc++6_4.9.2-10 libsuitesparse-dev_1:4.2.1-3 libsuperlu-dev_4.3+dfsg-3 libsuperlu4_4.3+dfsg-3 libsystemd0_215-12 libtcl8.5_8.5.17-1 libtcl8.6_8.6.2+dfsg-2 libthai-data_0.1.21-1 libthai0_0.1.21-1 libtiff5_4.0.3-12.3 libtimedate-perl_2.3000-2 libtinfo-dev_5.9+20140913-1+b1 libtinfo5_5.9+20140913-1+b1 libtk8.5_8.5.17-1 libtk8.6_8.6.2-1 libtsan0_4.9.2-10 libubsan0_4.9.2-10 libudev1_215-12 libumfpack5.6.2_1:4.2.1-3 libunistring0_0.9.3-5.2+b1 libusb-0.1-4_2:0.1.12-25 libustr-1.0-1_1.0.4-3+b2 libuuid1_2.25.2-5 libx11-6_2:1.6.2-3 libx11-data_2:1.6.2-3 libx11-dev_2:1.6.2-3 libx11-xcb-dev_2:1.6.2-3 libx11-xcb1_2:1.6.2-3 libxau-dev_1:1.0.8-1 libxau6_1:1.0.8-1 libxcb-dri2-0_1.10-3+b1 libxcb-dri2-0-dev_1.10-3+b1 libxcb-dri3-0_1.10-3+b1 libxcb-dri3-dev_1.10-3+b1 libxcb-glx0_1.10-3+b1 libxcb-glx0-dev_1.10-3+b1 libxcb-present-dev_1.10-3+b1 libxcb-present0_1.10-3+b1 libxcb-randr0_1.10-3+b1 libxcb-randr0-dev_1.10-3+b1 libxcb-render0_1.10-3+b1 libxcb-render0-dev_1.10-3+b1 libxcb-shape0_1.10-3+b1 libxcb-shape0-dev_1.10-3+b1 libxcb-shm0_1.10-3+b1 libxcb-sync-dev_1.10-3+b1 libxcb-sync1_1.10-3+b1 libxcb-xfixes0_1.10-3+b1 libxcb-xfixes0-dev_1.10-3+b1 libxcb1_1.10-3+b1 libxcb1-dev_1.10-3+b1 libxdamage-dev_1:1.1.4-2+b1 libxdamage1_1:1.1.4-2+b1 libxdmcp-dev_1:1.1.1-1+b1 libxdmcp6_1:1.1.1-1+b1 libxext-dev_2:1.3.3-1 libxext6_2:1.3.3-1 libxfixes-dev_1:5.0.1-2+b2 libxfixes3_1:5.0.1-2+b2 libxft-dev_2.3.2-1 libxft2_2.3.2-1 libxml2_2.9.2+dfsg1-3 libxrender-dev_1:0.9.8-1+b1 libxrender1_1:0.9.8-1+b1 libxshmfence-dev_1.1-4 libxshmfence1_1.1-4 libxss-dev_1:1.2.2-1 libxss1_1:1.2.2-1 libxt6_1:1.1.4-1+b1 libxxf86vm-dev_1:1.1.3-1+b1 libxxf86vm1_1:1.1.3-1+b1 linux-libc-dev_3.16.7-ckt7-1 login_1:4.2-3 lsb-base_4.1+Debian13+nmu1 m4_1.4.17-4 make_4.0-8.1 man-db_2.7.0.2-5 mawk_1.3.3-17 mesa-common-dev_10.4.2-2 mount_2.25.2-5 mpi-default-bin_1.0.2+nmu2 mpi-default-dev_1.0.2+nmu2 multiarch-support_2.19-17 ncurses-base_5.9+20140913-1 ncurses-bin_5.9+20140913-1+b1 nvi_1.81.6-11+b1 openmpi-bin_1.6.5-9.2 openmpi-common_1.6.5-9.2 passwd_1:4.2-3 patch_2.7.5-1 perl_5.20.2-2 perl-base_5.20.2-2 perl-modules_5.20.2-2 pkg-config_0.28-1 po-debconf_1.0.16+nmu3 procps_2:3.3.9-9 quilt_0.63-3 r-base-core_3.1.3-1 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-elmerfem-dummy_0.invalid.0 sed_4.2.2-4+b1 sensible-utils_0.0.9 startpar_0.59-3 sudo_1.8.12-1 systemd_215-12 systemd-sysv_215-12 sysv-rc_2.88dsf-58 sysvinit-utils_2.88dsf-58 tar_1.27.1-2+b1 tcl8.5_8.5.17-1 tcl8.5-dev_8.5.17-1 tk8.5_8.5.17-1 tk8.5-dev_8.5.17-1 tzdata_2015b-1 ucf_3.0030 udev_215-12 unzip_6.0-16 util-linux_2.25.2-5 x11-common_1:7.7+7 x11proto-core-dev_7.0.26-1 x11proto-damage-dev_1:1.2.1-2 x11proto-dri2-dev_2.8-2 x11proto-fixes-dev_1:5.0-2 x11proto-gl-dev_1.4.17-1 x11proto-input-dev_2.3.1-1 x11proto-kb-dev_1.0.6-2 x11proto-render-dev_2:0.11.1-2 x11proto-scrnsaver-dev_1.2.2-1 x11proto-xext-dev_7.3.0-1 x11proto-xf86vidmode-dev_2.3.1-2 xdg-utils_1.1.0~rc1+git20111210-7.4 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.1.1alpha+20120614-2+b3 zip_3.0-8 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Tue Dec 17 17:23:58 2013 UTC using RSA key ID 28F39278 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./elmerfem_6.1.0.svn.5396.dfsg2-4.dsc dpkg-source: info: extracting elmerfem in elmerfem-6.1.0.svn.5396.dfsg2 dpkg-source: info: unpacking elmerfem_6.1.0.svn.5396.dfsg2.orig.tar.gz dpkg-source: info: unpacking elmerfem_6.1.0.svn.5396.dfsg2-4.debian.tar.gz dpkg-source: info: applying banish-rpath.patch dpkg-source: info: applying no-metis-partmesh.patch dpkg-source: info: applying elmer-revision.patch dpkg-source: info: applying add-NAMESPACE-for-elmerparam-R-module.patch Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── DEB_BUILD_OPTIONS=parallel=10 HOME=/sbuild-nonexistent LOGNAME=user PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user SCHROOT_SESSION_ID=unstable-amd64-sbuild-9387885f-d382-4fc3-b0e2-17c82f8f946b SCHROOT_UID=1001 SCHROOT_USER=user SHELL=/bin/sh USER=user dpkg-buildpackage ───────────────── dpkg-buildpackage: source package elmerfem dpkg-buildpackage: source version 6.1.0.svn.5396.dfsg2-4 dpkg-buildpackage: source distribution unstable dpkg-buildpackage: source changed by Boris Pek dpkg-source --before-build elmerfem-6.1.0.svn.5396.dfsg2 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean if [ ! -d .pc ]; then \ QUILT_PATCHES=debian/patches quilt push -a; \ fi dh_testdir for elmermodule in eio matc elmerparam hutiter meshgen2d fem front elmergrid post; do \ if [ -e $elmermodule/Makefile ]; then \ echo; echo CLEANING ELMER MODULE $elmermodule; echo; \ make -C $elmermodule maintainer-clean; \ fi; \ done for missingfile in eio/NEWS eio/README eio/AUTHORS eio/ChangeLog matc/NEWS matc/README matc/AUTHORS matc/ChangeLog matc/COPYING meshgen2d/NEWS meshgen2d/README meshgen2d/AUTHORS meshgen2d/ChangeLog meshgen2d/COPYING meshgen2d/INSTALL fem/NEWS fem/AUTHORS fem/ChangeLog fem/COPYING fem/INSTALL front/NEWS front/README front/AUTHORS front/COPYING front/INSTALL elmergrid/NEWS elmergrid/README elmergrid/AUTHORS elmergrid/ChangeLog elmergrid/COPYING elmergrid/INSTALL elmergrid/src/metis/Makefile.am post/NEWS post/AUTHORS post/ChangeLog post/COPYING post/INSTALL; do rm -f $missingfile; done for backupfile in eio/Makefile.in eio/configure eio/include/Makefile.in eio/src/Makefile.in elmergrid/Makefile.in elmergrid/aclocal.m4 elmergrid/configure elmergrid/src/Makefile.in elmerparam/Makefile.in elmerparam/aclocal.m4 elmerparam/config.h.in elmerparam/configure elmerparam/src/Makefile.in elmerparam/src/R/Makefile elmerparam/src/R/elmerparam/src/Makevars elmerparam/src/matlab/Makefile elmerparam/test/Makefile.in fem/Makefile.in fem/aclocal.m4 fem/config.h fem/configure fem/stamp-h1 fem/src/Makefile.in fem/src/binio/Makefile.in fem/src/binio/test/Makefile.in fem/src/view3d/Makefile.in fem/src/viewaxis/Makefile.in fem/tests/Makefile.in fem/tests/runtests front/Makefile.in front/aclocal.m4 front/configure front/include/Makefile.in front/src/Makefile.in front/src/tcl/ecif_tcl_mainScript.tcl hutiter/Makefile.in hutiter/configure hutiter/examples/Makefile.in hutiter/examples/ex1/Makefile.in hutiter/include/Makefile.in hutiter/src/Makefile.in matc/Makefile.in matc/aclocal.m4 matc/configure matc/src/Makefile.in meshgen2d/Makefile.in meshgen2d/aclocal.m4 meshgen2d/configure meshgen2d/src/Makefile.in meshgen2d/src/include/Makefile.in post/Makefile.in post/aclocal.m4 post/configure post/src/Makefile.in post/src/camera/Makefile.in post/src/elements/Makefile.in post/src/glaux/Makefile.in post/src/graphics/Makefile.in post/src/modules/Makefile.in post/src/objects/Makefile.in post/src/sico2elmer/Makefile.in post/src/tcl/Makefile.in post/src/tk/Makefile.in post/src/visuals/Makefile.in; do \ if [ -e $backupfile.bak ]; then \ mv -f $backupfile.bak $backupfile; \ fi; \ done rm -rf elmergrid/src/metis post/src/fonts/TrueType rm -f stamp-* if [ -d .pc ]; then \ QUILT_PATCHES=debian/patches quilt pop -a && rm -rf .pc; \ fi Removing patch debian/patches/add-NAMESPACE-for-elmerparam-R-module.patch Removing elmerparam/src/R/elmerparam/NAMESPACE Removing patch debian/patches/elmer-revision.patch Restoring fem/acx_elmer.m4 Removing patch debian/patches/no-metis-partmesh.patch Restoring elmergrid/src/femelmer.c Removing patch debian/patches/banish-rpath.patch Restoring fem/src/Makefile.am No patches applied rm -f eio/aclocal.m4 rm -f hutiter/aclocal.m4 dh_clean debian/rules build-arch if [ ! -d .pc ]; then \ QUILT_PATCHES=debian/patches quilt push -a; \ fi Applying patch debian/patches/banish-rpath.patch patching file fem/src/Makefile.am Applying patch debian/patches/no-metis-partmesh.patch patching file elmergrid/src/femelmer.c Applying patch debian/patches/elmer-revision.patch patching file fem/acx_elmer.m4 Applying patch debian/patches/add-NAMESPACE-for-elmerparam-R-module.patch patching file elmerparam/src/R/elmerparam/NAMESPACE Now at patch debian/patches/add-NAMESPACE-for-elmerparam-R-module.patch dh_testdir for backupfile in eio/Makefile.in eio/configure eio/include/Makefile.in eio/src/Makefile.in elmergrid/Makefile.in elmergrid/aclocal.m4 elmergrid/configure elmergrid/src/Makefile.in elmerparam/Makefile.in elmerparam/aclocal.m4 elmerparam/config.h.in elmerparam/configure elmerparam/src/Makefile.in elmerparam/src/R/Makefile elmerparam/src/R/elmerparam/src/Makevars elmerparam/src/matlab/Makefile elmerparam/test/Makefile.in fem/Makefile.in fem/aclocal.m4 fem/config.h fem/configure fem/stamp-h1 fem/src/Makefile.in fem/src/binio/Makefile.in fem/src/binio/test/Makefile.in fem/src/view3d/Makefile.in fem/src/viewaxis/Makefile.in fem/tests/Makefile.in fem/tests/runtests front/Makefile.in front/aclocal.m4 front/configure front/include/Makefile.in front/src/Makefile.in front/src/tcl/ecif_tcl_mainScript.tcl hutiter/Makefile.in hutiter/configure hutiter/examples/Makefile.in hutiter/examples/ex1/Makefile.in hutiter/include/Makefile.in hutiter/src/Makefile.in matc/Makefile.in matc/aclocal.m4 matc/configure matc/src/Makefile.in meshgen2d/Makefile.in meshgen2d/aclocal.m4 meshgen2d/configure meshgen2d/src/Makefile.in meshgen2d/src/include/Makefile.in post/Makefile.in post/aclocal.m4 post/configure post/src/Makefile.in post/src/camera/Makefile.in post/src/elements/Makefile.in post/src/glaux/Makefile.in post/src/graphics/Makefile.in post/src/modules/Makefile.in post/src/objects/Makefile.in post/src/sico2elmer/Makefile.in post/src/tcl/Makefile.in post/src/tk/Makefile.in post/src/visuals/Makefile.in; do \ cp -a $backupfile $backupfile.bak; \ done mkdir elmergrid/src/metis install -d post/src/fonts/TrueType for missingfile in eio/NEWS eio/README eio/AUTHORS eio/ChangeLog matc/NEWS matc/README matc/AUTHORS matc/ChangeLog matc/COPYING meshgen2d/NEWS meshgen2d/README meshgen2d/AUTHORS meshgen2d/ChangeLog meshgen2d/COPYING meshgen2d/INSTALL fem/NEWS fem/AUTHORS fem/ChangeLog fem/COPYING fem/INSTALL front/NEWS front/README front/AUTHORS front/COPYING front/INSTALL elmergrid/NEWS elmergrid/README elmergrid/AUTHORS elmergrid/ChangeLog elmergrid/COPYING elmergrid/INSTALL elmergrid/src/metis/Makefile.am post/NEWS post/AUTHORS post/ChangeLog post/COPYING post/INSTALL; do touch $missingfile; done for aclocaldir in eio matc elmerparam hutiter meshgen2d fem front elmergrid post; do \ echo Running aclocal/automake in module $aclocaldir; \ (cd $aclocaldir && aclocal && automake --add-missing); \ done Running aclocal/automake in module eio aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:30: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... acx_elmer.m4:1136: ACX_FC_CHAR_MANGLING is expanded from... configure.in:30: the top level configure.in:32: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:1346: ACX_SHLIB_STUFF is expanded from... configure.in:32: the top level automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:30: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... acx_elmer.m4:1136: ACX_FC_CHAR_MANGLING is expanded from... configure.in:30: the top level configure.in:32: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:1346: ACX_SHLIB_STUFF is expanded from... configure.in:32: the top level configure.in:9: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:9: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:11: installing './compile' src/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' Running aclocal/automake in module matc aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:11: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:11: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:13: installing './compile' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' Running aclocal/automake in module elmerparam aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:21: warning: AC_CACHE_VAL(modsearch_opt, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:28: ee_FC_MODSEARCH_OPT is expanded from... configure.in:21: the top level configure.in:23: warning: AC_CACHE_VAL(modfilename, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:1: ee_FC_MODFILE is expanded from... configure.in:23: the top level configure.in:25: warning: AC_CACHE_VAL(iargc_decl, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:88: ee_IARGC_DECL is expanded from... configure.in:25: the top level configure.in:25: warning: AC_CACHE_VAL(iargc_decl, ...): suspicious presence of an AC_SUBST in the second argument, where no actions should be taken ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:88: ee_IARGC_DECL is expanded from... configure.in:25: the top level configure.in:45: warning: AC_CACHE_VAL(mex_ext, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:66: ee_MEXEXT is expanded from... configure.in:45: the top level automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:21: warning: AC_CACHE_VAL(modsearch_opt, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:28: ee_FC_MODSEARCH_OPT is expanded from... configure.in:21: the top level configure.in:23: warning: AC_CACHE_VAL(modfilename, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:1: ee_FC_MODFILE is expanded from... configure.in:23: the top level configure.in:25: warning: AC_CACHE_VAL(iargc_decl, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:88: ee_IARGC_DECL is expanded from... configure.in:25: the top level configure.in:25: warning: AC_CACHE_VAL(iargc_decl, ...): suspicious presence of an AC_SUBST in the second argument, where no actions should be taken ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:88: ee_IARGC_DECL is expanded from... configure.in:25: the top level configure.in:45: warning: AC_CACHE_VAL(mex_ext, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:66: ee_MEXEXT is expanded from... configure.in:45: the top level configure.in:7: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:7: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:18: installing './compile' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' parallel-tests: installing './test-driver' Running aclocal/automake in module hutiter aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:62: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_blas.m4:33: ACX_BLAS is expanded from... configure.in:62: the top level automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:62: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_blas.m4:33: ACX_BLAS is expanded from... configure.in:62: the top level configure.in:8: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:8: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:13: installing './compile' src/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' Running aclocal/automake in module meshgen2d aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:6: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:6: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:14: installing './compile' src/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' Running aclocal/automake in module fem aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:47: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... acx_elmer.m4:1347: ACX_FC_CHAR_MANGLING is expanded from... configure.in:47: the top level configure.in:54: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:1578: ACX_SHLIB_STUFF is expanded from... configure.in:54: the top level configure.in:101: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_blas.m4:33: ACX_BLAS is expanded from... configure.in:101: the top level configure.in:102: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_lapack.m4:31: ACX_LAPACK is expanded from... configure.in:102: the top level configure.in:103: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:131: ACX_HUTI is expanded from... configure.in:103: the top level configure.in:104: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:238: ACX_EIOF is expanded from... configure.in:104: the top level configure.in:105: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:411: ACX_ARPACK is expanded from... configure.in:105: the top level configure.in:107: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:633: ACX_HYPRE is expanded from... configure.in:107: the top level configure.in:108: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:714: ACX_MUMPS is expanded from... configure.in:108: the top level configure.in:109: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:553: ACX_UMFPACK is expanded from... configure.in:109: the top level configure.in:150: warning: AC_CACHE_VAL(modfilename, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_elmer.m4:2105: ACX_FC_MODFILE is expanded from... configure.in:150: the top level configure.in:152: warning: AC_CACHE_VAL(modput_opt, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_elmer.m4:2134: ACX_FC_PUT_MODULE_FLAG is expanded from... configure.in:152: the top level automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:47: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... acx_elmer.m4:1347: ACX_FC_CHAR_MANGLING is expanded from... configure.in:47: the top level configure.in:54: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:1578: ACX_SHLIB_STUFF is expanded from... configure.in:54: the top level configure.in:101: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_blas.m4:33: ACX_BLAS is expanded from... configure.in:101: the top level configure.in:102: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_lapack.m4:31: ACX_LAPACK is expanded from... configure.in:102: the top level configure.in:103: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:131: ACX_HUTI is expanded from... configure.in:103: the top level configure.in:104: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:238: ACX_EIOF is expanded from... configure.in:104: the top level configure.in:105: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:411: ACX_ARPACK is expanded from... configure.in:105: the top level configure.in:107: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:633: ACX_HYPRE is expanded from... configure.in:107: the top level configure.in:108: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:714: ACX_MUMPS is expanded from... configure.in:108: the top level configure.in:109: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:553: ACX_UMFPACK is expanded from... configure.in:109: the top level configure.in:150: warning: AC_CACHE_VAL(modfilename, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_elmer.m4:2105: ACX_FC_MODFILE is expanded from... configure.in:150: the top level configure.in:152: warning: AC_CACHE_VAL(modput_opt, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_elmer.m4:2134: ACX_FC_PUT_MODULE_FLAG is expanded from... configure.in:152: the top level configure.in:9: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:9: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:13: installing './compile' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' parallel-tests: installing './test-driver' Running aclocal/automake in module front aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:7: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:7: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:10: installing './compile' src/Makefile.am:76: warning: '%'-style pattern rules are a GNU make extension src/Makefile.am:1: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' Running aclocal/automake in module elmergrid aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:6: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:6: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:8: installing './compile' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' Running aclocal/automake in module post aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:32: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... acx_elmer.m4:1142: ACX_FC_CHAR_MANGLING is expanded from... configure.in:32: the top level configure.in:73: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:1352: ACX_SHLIB_STUFF is expanded from... configure.in:73: the top level automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:32: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... acx_elmer.m4:1142: ACX_FC_CHAR_MANGLING is expanded from... configure.in:32: the top level configure.in:73: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:1352: ACX_SHLIB_STUFF is expanded from... configure.in:73: the top level configure.in:10: installing './compile' src/Makefile.am:48: warning: '%'-style pattern rules are a GNU make extension automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' src/camera/Makefile.am:9: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') set -e; for elmermodule in eio matc elmerparam hutiter meshgen2d fem front elmergrid post; do \ echo; echo CONFIGURING ELMER MODULE $elmermodule; echo; \ (cd $elmermodule && \ autoconf && \ LIBS="-L/«PKGBUILDDIR»/debian/tmp/usr/lib" \ CPPFLAGS=" -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2" \ FCPPFLAGS=" -I/«PKGBUILDDIR»/debian/tmp/usr/include" \ CFLAGS=" -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC" \ CXXFLAGS=" -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC" \ FCFLAGS=" -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC" \ ./configure --prefix=/usr --with-metis=/usr \ --with-mpi-dir=/usr --with-mpi-inc-dir=/usr/include/mpi \ --with-blas=-lblas --with-lapack=-llapack \ --with-mumps=dmumps_scotch); \ echo; echo BUILDING ELMER MODULE $elmermodule; echo; \ make -C $elmermodule; \ echo; echo INSTALLING ELMER MODULE $elmermodule; echo; \ make -C $elmermodule install DESTDIR=/«PKGBUILDDIR»/debian/tmp; \ done CONFIGURING ELMER MODULE eio configure.in:30: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... acx_elmer.m4:1136: ACX_FC_CHAR_MANGLING is expanded from... configure.in:30: the top level configure.in:32: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:1346: ACX_SHLIB_STUFF is expanded from... configure.in:32: the top level configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-blas, --with-lapack, --with-mumps checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes /«PKGBUILDDIR»/eio/missing: Unknown `--is-lightweight' option Try `/«PKGBUILDDIR»/eio/missing --help' for more information configure: WARNING: 'missing' script is too old or missing checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for default compilation flags... optimized checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking for xlC... no checking for pathCC... no checking for icc... no checking for CC... no checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for ranlib... ranlib checking for ar... ar checking for ar flags... cru checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for 64 bit compilation flags... let's see what happens checking for 64 bit CFLAGS... -m64 -fPIC checking for 64 bit FCFLAGS... -m64 -fPIC checking for 64 bit CXXFLAGS... -m64 -fPIC checking size of void*... 8 checking to see if we got 64 bits... oh yes checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for dummy main to link with Fortran libraries... (cached) none checking whether we are using the Microsoft C compiler... no checking for Fortran char* mangling scheme... char_ptr checking for shl_load in -ldld... no checking for shl_load... no checking for shl_findsym... no checking for dlopen in -ldl... yes checking for dlopen... yes checking for dlsym... yes checking for dlerror... yes checking for dlclose... yes checking for ANSI C header files... (cached) yes checking whether we are using the Microsoft C compiler... (cached) no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating include/Makefile config.status: creating src/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-blas, --with-lapack, --with-mumps BUILDING ELMER MODULE eio make[1]: Entering directory '/«PKGBUILDDIR»/eio' make all-recursive make[2]: Entering directory '/«PKGBUILDDIR»/eio' Making all in include make[3]: Entering directory '/«PKGBUILDDIR»/eio/include' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/«PKGBUILDDIR»/eio/include' Making all in src make[3]: Entering directory '/«PKGBUILDDIR»/eio/src' g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT EIOConstraintAgent.o -MD -MP -MF .deps/EIOConstraintAgent.Tpo -c -o EIOConstraintAgent.o EIOConstraintAgent.cpp EIOConstraintAgent.cpp:33:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "constraints.header", ^ EIOConstraintAgent.cpp:34:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "constraints.table" ^ 2 warnings generated. mv -f .deps/EIOConstraintAgent.Tpo .deps/EIOConstraintAgent.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT EIODualMeshAgent.o -MD -MP -MF .deps/EIODualMeshAgent.Tpo -c -o EIODualMeshAgent.o EIODualMeshAgent.cpp EIODualMeshAgent.cpp:31:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "/mesh.header", ^ EIODualMeshAgent.cpp:32:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "/dual.elements" ^ 2 warnings generated. mv -f .deps/EIODualMeshAgent.Tpo .deps/EIODualMeshAgent.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT EIOGeometryAgent.o -MD -MP -MF .deps/EIOGeometryAgent.Tpo -c -o EIOGeometryAgent.o EIOGeometryAgent.cpp EIOGeometryAgent.cpp:30:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "geometry.header", ^ EIOGeometryAgent.cpp:31:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "geometry.nodes", ^ EIOGeometryAgent.cpp:32:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "geometry.elements", ^ EIOGeometryAgent.cpp:33:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "geometry.bodies", ^ EIOGeometryAgent.cpp:34:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "geometry.loops", ^ EIOGeometryAgent.cpp:35:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "geometry.boundaries" ^ 6 warnings generated. mv -f .deps/EIOGeometryAgent.Tpo .deps/EIOGeometryAgent.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT EIOMeshAgent.o -MD -MP -MF .deps/EIOMeshAgent.Tpo -c -o EIOMeshAgent.o EIOMeshAgent.cpp EIOMeshAgent.cpp:73:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "/mesh.header", ^ EIOMeshAgent.cpp:74:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "/mesh.nodes", ^ EIOMeshAgent.cpp:75:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "/mesh.elements", ^ EIOMeshAgent.cpp:76:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "/mesh.boundary" ^ EIOMeshAgent.cpp:79:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.header", ^ EIOMeshAgent.cpp:80:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.nodes", ^ EIOMeshAgent.cpp:81:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.elements", ^ EIOMeshAgent.cpp:82:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.boundary", //"%s/%s.part.%d.boundary", ^ EIOMeshAgent.cpp:83:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.shared" ^ 9 warnings generated. mv -f .deps/EIOMeshAgent.Tpo .deps/EIOMeshAgent.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT EIOModelDataAgent.o -MD -MP -MF .deps/EIOModelDataAgent.Tpo -c -o EIOModelDataAgent.o EIOModelDataAgent.cpp EIOModelDataAgent.cpp:101:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.header", ^ EIOModelDataAgent.cpp:102:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.coordinates", ^ EIOModelDataAgent.cpp:103:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.mesh_parameters", ^ EIOModelDataAgent.cpp:104:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.materials", ^ EIOModelDataAgent.cpp:105:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.boundary_conditions", ^ EIOModelDataAgent.cpp:106:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.initial_conditions", ^ EIOModelDataAgent.cpp:107:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.body_equations", ^ EIOModelDataAgent.cpp:108:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.body_forces", ^ EIOModelDataAgent.cpp:109:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.constants", ^ EIOModelDataAgent.cpp:110:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "modeldata.bodies" ^ EIOModelDataAgent.cpp:214:18: warning: array index 9 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODIES]; ^ ~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:229:18: warning: array index 9 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODIES]; ^ ~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:243:18: warning: array index 8 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[CONSTANTS]; ^ ~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:256:18: warning: array index 8 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[CONSTANTS]; ^ ~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:331:18: warning: array index 3 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[MATERIALS]; ^ ~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:339:18: warning: array index 3 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[MATERIALS]; ^ ~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:347:18: warning: array index 3 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[MATERIALS]; ^ ~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:355:18: warning: array index 3 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[MATERIALS]; ^ ~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:363:18: warning: array index 4 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BOUNDARYCONDITIONS]; ^ ~~~~~~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:372:18: warning: array index 4 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BOUNDARYCONDITIONS]; ^ ~~~~~~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:380:18: warning: array index 4 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BOUNDARYCONDITIONS]; ^ ~~~~~~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:388:18: warning: array index 4 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BOUNDARYCONDITIONS]; ^ ~~~~~~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:396:18: warning: array index 5 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[INITIALCONDITIONS]; ^ ~~~~~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:405:18: warning: array index 5 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[INITIALCONDITIONS]; ^ ~~~~~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:413:18: warning: array index 5 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[INITIALCONDITIONS]; ^ ~~~~~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:421:18: warning: array index 5 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[INITIALCONDITIONS]; ^ ~~~~~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:429:18: warning: array index 6 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODYEQUATIONS]; ^ ~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:438:18: warning: array index 6 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODYEQUATIONS]; ^ ~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:446:18: warning: array index 6 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODYEQUATIONS]; ^ ~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:454:18: warning: array index 6 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODYEQUATIONS]; ^ ~~~~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:462:18: warning: array index 7 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODYFORCES]; ^ ~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:471:18: warning: array index 7 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODYFORCES]; ^ ~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:479:18: warning: array index 7 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODYFORCES]; ^ ~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ EIOModelDataAgent.cpp:487:18: warning: array index 7 is past the end of the array (which contains 3 elements) [-Warray-bounds] fstream& str = modelDataFileStream[BODYFORCES]; ^ ~~~~~~~~~~ ../include/EIOModelDataAgent.h:116:3: note: array 'modelDataFileStream' declared here fstream modelDataFileStream[modelDataFiles]; ^ 34 warnings generated. mv -f .deps/EIOModelDataAgent.Tpo .deps/EIOModelDataAgent.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT EIOModelManager.o -MD -MP -MF .deps/EIOModelManager.Tpo -c -o EIOModelManager.o EIOModelManager.cpp mv -f .deps/EIOModelManager.Tpo .deps/EIOModelManager.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT EIOPartWriter.o -MD -MP -MF .deps/EIOPartWriter.Tpo -c -o EIOPartWriter.o EIOPartWriter.cpp EIOPartWriter.cpp:32:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.header", ^ EIOPartWriter.cpp:33:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.nodes", ^ EIOPartWriter.cpp:34:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.shared", ^ EIOPartWriter.cpp:35:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.elements", ^ EIOPartWriter.cpp:36:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "%s/part.%d.border" ^ 5 warnings generated. mv -f .deps/EIOPartWriter.Tpo .deps/EIOPartWriter.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT EIOSolverAgent.o -MD -MP -MF .deps/EIOSolverAgent.Tpo -c -o EIOSolverAgent.o EIOSolverAgent.cpp EIOSolverAgent.cpp:32:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "solver.header", ^ EIOSolverAgent.cpp:33:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "solver.records", ^ EIOSolverAgent.cpp:34:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "timestep.header", ^ EIOSolverAgent.cpp:35:3: warning: conversion from string literal to 'char *' is deprecated [-Wc++11-compat-deprecated-writable-strings] "timestep.records" ^ 4 warnings generated. mv -f .deps/EIOSolverAgent.Tpo .deps/EIOSolverAgent.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT eio_api_c.o -MD -MP -MF .deps/eio_api_c.Tpo -c -o eio_api_c.o eio_api_c.cpp eio_api_c.cpp:59:19: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(modelManager = new EIOModelManager) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:59:19: note: place parentheses around the assignment to silence this warning if(modelManager = new EIOModelManager) ^ ( ) eio_api_c.cpp:59:19: note: use '==' to turn this assignment into an equality comparison if(modelManager = new EIOModelManager) ^ == eio_api_c.cpp:76:19: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(modelManager = new EIOModelManager) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:76:19: note: place parentheses around the assignment to silence this warning if(modelManager = new EIOModelManager) ^ ( ) eio_api_c.cpp:76:19: note: use '==' to turn this assignment into an equality comparison if(modelManager = new EIOModelManager) ^ == eio_api_c.cpp:114:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(geometryAgent = new EIOGeometryAgent(modelManager)) ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:114:20: note: place parentheses around the assignment to silence this warning if(geometryAgent = new EIOGeometryAgent(modelManager)) ^ ( ) eio_api_c.cpp:114:20: note: use '==' to turn this assignment into an equality comparison if(geometryAgent = new EIOGeometryAgent(modelManager)) ^ == eio_api_c.cpp:127:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(geometryAgent = new EIOGeometryAgent(modelManager)) ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:127:20: note: place parentheses around the assignment to silence this warning if(geometryAgent = new EIOGeometryAgent(modelManager)) ^ ( ) eio_api_c.cpp:127:20: note: use '==' to turn this assignment into an equality comparison if(geometryAgent = new EIOGeometryAgent(modelManager)) ^ == eio_api_c.cpp:268:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(meshAgent = new EIOMeshAgent(modelManager)) ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:268:16: note: place parentheses around the assignment to silence this warning if(meshAgent = new EIOMeshAgent(modelManager)) ^ ( ) eio_api_c.cpp:268:16: note: use '==' to turn this assignment into an equality comparison if(meshAgent = new EIOMeshAgent(modelManager)) ^ == eio_api_c.cpp:403:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:403:20: note: place parentheses around the assignment to silence this warning if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ^ ( ) eio_api_c.cpp:403:20: note: use '==' to turn this assignment into an equality comparison if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ^ == eio_api_c.cpp:416:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:416:20: note: place parentheses around the assignment to silence this warning if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ^ ( ) eio_api_c.cpp:416:20: note: use '==' to turn this assignment into an equality comparison if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ^ == eio_api_c.cpp:454:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(partitioningWriter = new EIOPartWriter(parts, modelManager)) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:454:25: note: place parentheses around the assignment to silence this warning if(partitioningWriter = new EIOPartWriter(parts, modelManager)) ^ ( ) eio_api_c.cpp:454:25: note: use '==' to turn this assignment into an equality comparison if(partitioningWriter = new EIOPartWriter(parts, modelManager)) ^ == eio_api_c.cpp:575:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(modelDataAgent = new EIOModelDataAgent(modelManager)) ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:575:21: note: place parentheses around the assignment to silence this warning if(modelDataAgent = new EIOModelDataAgent(modelManager)) ^ ( ) eio_api_c.cpp:575:21: note: use '==' to turn this assignment into an equality comparison if(modelDataAgent = new EIOModelDataAgent(modelManager)) ^ == eio_api_c.cpp:588:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(modelDataAgent = new EIOModelDataAgent(modelManager)) ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:588:21: note: place parentheses around the assignment to silence this warning if(modelDataAgent = new EIOModelDataAgent(modelManager)) ^ ( ) eio_api_c.cpp:588:21: note: use '==' to turn this assignment into an equality comparison if(modelDataAgent = new EIOModelDataAgent(modelManager)) ^ == eio_api_c.cpp:942:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(solverAgent = new EIOSolverAgent(modelManager)) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:942:18: note: place parentheses around the assignment to silence this warning if(solverAgent = new EIOSolverAgent(modelManager)) ^ ( ) eio_api_c.cpp:942:18: note: use '==' to turn this assignment into an equality comparison if(solverAgent = new EIOSolverAgent(modelManager)) ^ == eio_api_c.cpp:955:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(solverAgent = new EIOSolverAgent(modelManager)) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_c.cpp:955:18: note: place parentheses around the assignment to silence this warning if(solverAgent = new EIOSolverAgent(modelManager)) ^ ( ) eio_api_c.cpp:955:18: note: use '==' to turn this assignment into an equality comparison if(solverAgent = new EIOSolverAgent(modelManager)) ^ == 12 warnings generated. mv -f .deps/eio_api_c.Tpo .deps/eio_api_c.Po rm -f libeioc.a ar cru libeioc.a EIOConstraintAgent.o EIODualMeshAgent.o EIOGeometryAgent.o EIOMeshAgent.o EIOModelDataAgent.o EIOModelManager.o EIOPartWriter.o EIOSolverAgent.o eio_api_c.o ranlib libeioc.a g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -MT eio_api_f.o -MD -MP -MF .deps/eio_api_f.Tpo -c -o eio_api_f.o eio_api_f.cpp eio_api_f.cpp:60:19: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(modelManager = new EIOModelManager) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:60:19: note: place parentheses around the assignment to silence this warning if(modelManager = new EIOModelManager) ^ ( ) eio_api_f.cpp:60:19: note: use '==' to turn this assignment into an equality comparison if(modelManager = new EIOModelManager) ^ == eio_api_f.cpp:77:19: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(modelManager = new EIOModelManager) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:77:19: note: place parentheses around the assignment to silence this warning if(modelManager = new EIOModelManager) ^ ( ) eio_api_f.cpp:77:19: note: use '==' to turn this assignment into an equality comparison if(modelManager = new EIOModelManager) ^ == eio_api_f.cpp:115:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(geometryAgent = new EIOGeometryAgent(modelManager)) ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:115:20: note: place parentheses around the assignment to silence this warning if(geometryAgent = new EIOGeometryAgent(modelManager)) ^ ( ) eio_api_f.cpp:115:20: note: use '==' to turn this assignment into an equality comparison if(geometryAgent = new EIOGeometryAgent(modelManager)) ^ == eio_api_f.cpp:128:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(geometryAgent = new EIOGeometryAgent(modelManager)) ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:128:20: note: place parentheses around the assignment to silence this warning if(geometryAgent = new EIOGeometryAgent(modelManager)) ^ ( ) eio_api_f.cpp:128:20: note: use '==' to turn this assignment into an equality comparison if(geometryAgent = new EIOGeometryAgent(modelManager)) ^ == eio_api_f.cpp:269:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(meshAgent = new EIOMeshAgent(modelManager)) ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:269:16: note: place parentheses around the assignment to silence this warning if(meshAgent = new EIOMeshAgent(modelManager)) ^ ( ) eio_api_f.cpp:269:16: note: use '==' to turn this assignment into an equality comparison if(meshAgent = new EIOMeshAgent(modelManager)) ^ == eio_api_f.cpp:402:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:402:20: note: place parentheses around the assignment to silence this warning if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ^ ( ) eio_api_f.cpp:402:20: note: use '==' to turn this assignment into an equality comparison if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ^ == eio_api_f.cpp:415:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:415:20: note: place parentheses around the assignment to silence this warning if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ^ ( ) eio_api_f.cpp:415:20: note: use '==' to turn this assignment into an equality comparison if(dualMeshAgent = new EIODualMeshAgent(modelManager)) ^ == eio_api_f.cpp:453:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(partitioningWriter = new EIOPartWriter(parts, modelManager)) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:453:25: note: place parentheses around the assignment to silence this warning if(partitioningWriter = new EIOPartWriter(parts, modelManager)) ^ ( ) eio_api_f.cpp:453:25: note: use '==' to turn this assignment into an equality comparison if(partitioningWriter = new EIOPartWriter(parts, modelManager)) ^ == eio_api_f.cpp:574:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(modelDataAgent = new EIOModelDataAgent(modelManager)) ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:574:21: note: place parentheses around the assignment to silence this warning if(modelDataAgent = new EIOModelDataAgent(modelManager)) ^ ( ) eio_api_f.cpp:574:21: note: use '==' to turn this assignment into an equality comparison if(modelDataAgent = new EIOModelDataAgent(modelManager)) ^ == eio_api_f.cpp:587:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(modelDataAgent = new EIOModelDataAgent(modelManager)) ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:587:21: note: place parentheses around the assignment to silence this warning if(modelDataAgent = new EIOModelDataAgent(modelManager)) ^ ( ) eio_api_f.cpp:587:21: note: use '==' to turn this assignment into an equality comparison if(modelDataAgent = new EIOModelDataAgent(modelManager)) ^ == eio_api_f.cpp:941:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(solverAgent = new EIOSolverAgent(modelManager)) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:941:18: note: place parentheses around the assignment to silence this warning if(solverAgent = new EIOSolverAgent(modelManager)) ^ ( ) eio_api_f.cpp:941:18: note: use '==' to turn this assignment into an equality comparison if(solverAgent = new EIOSolverAgent(modelManager)) ^ == eio_api_f.cpp:954:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if(solverAgent = new EIOSolverAgent(modelManager)) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eio_api_f.cpp:954:18: note: place parentheses around the assignment to silence this warning if(solverAgent = new EIOSolverAgent(modelManager)) ^ ( ) eio_api_f.cpp:954:18: note: use '==' to turn this assignment into an equality comparison if(solverAgent = new EIOSolverAgent(modelManager)) ^ == 12 warnings generated. mv -f .deps/eio_api_f.Tpo .deps/eio_api_f.Po rm -f libeiof.a ar cru libeiof.a EIOConstraintAgent.o EIODualMeshAgent.o EIOGeometryAgent.o EIOMeshAgent.o EIOModelDataAgent.o EIOModelManager.o EIOPartWriter.o EIOSolverAgent.o eio_api_f.o ranlib libeiof.a make[3]: Leaving directory '/«PKGBUILDDIR»/eio/src' make[3]: Entering directory '/«PKGBUILDDIR»/eio' make[3]: Leaving directory '/«PKGBUILDDIR»/eio' make[2]: Leaving directory '/«PKGBUILDDIR»/eio' make[1]: Leaving directory '/«PKGBUILDDIR»/eio' INSTALLING ELMER MODULE eio make[1]: Entering directory '/«PKGBUILDDIR»/eio' Making install in include make[2]: Entering directory '/«PKGBUILDDIR»/eio/include' make[3]: Entering directory '/«PKGBUILDDIR»/eio/include' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/include' /usr/bin/install -c -m 644 eio_api.h '/«PKGBUILDDIR»/debian/tmp/usr/include' make[3]: Leaving directory '/«PKGBUILDDIR»/eio/include' make[2]: Leaving directory '/«PKGBUILDDIR»/eio/include' Making install in src make[2]: Entering directory '/«PKGBUILDDIR»/eio/src' make[3]: Entering directory '/«PKGBUILDDIR»/eio/src' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/lib' /usr/bin/install -c -m 644 libeioc.a libeiof.a '/«PKGBUILDDIR»/debian/tmp/usr/lib' ( cd '/«PKGBUILDDIR»/debian/tmp/usr/lib' && ranlib libeioc.a ) ( cd '/«PKGBUILDDIR»/debian/tmp/usr/lib' && ranlib libeiof.a ) make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/«PKGBUILDDIR»/eio/src' make[2]: Leaving directory '/«PKGBUILDDIR»/eio/src' make[2]: Entering directory '/«PKGBUILDDIR»/eio' make[3]: Entering directory '/«PKGBUILDDIR»/eio' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/«PKGBUILDDIR»/eio' make[2]: Leaving directory '/«PKGBUILDDIR»/eio' make[1]: Leaving directory '/«PKGBUILDDIR»/eio' CONFIGURING ELMER MODULE matc configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-blas, --with-lapack, --with-mumps checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes /«PKGBUILDDIR»/matc/missing: Unknown `--is-lightweight' option Try `/«PKGBUILDDIR»/matc/missing --help' for more information configure: WARNING: 'missing' script is too old or missing checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for default compilation flags... optimized checking for ar... ar checking for ar flags... cru checking whether we are using the Microsoft C compiler... no checking for ranlib... ranlib checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for 64 bit compilation flags... let's see what happens checking for 64 bit CFLAGS... -m64 -fPIC checking size of void*... 8 checking to see if we got 64 bits... oh yes checking for main in -lm... yes checking for main in -lcurses... yes checking math.h usability... yes checking math.h presence... yes checking for math.h... yes checking for tputs in -lncurses... yes checking for rl_set_keyboard_input_timeout in -lreadline... yes checking readline.h usability... no checking readline.h presence... no checking for readline.h... no checking readline/readline.h usability... yes checking readline/readline.h presence... yes checking for readline/readline.h... yes checking whether to enable maintainer-specific portions of Makefiles... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-blas, --with-lapack, --with-mumps BUILDING ELMER MODULE matc make[1]: Entering directory '/«PKGBUILDDIR»/matc' make all-recursive make[2]: Entering directory '/«PKGBUILDDIR»/matc' Making all in src make[3]: Entering directory '/«PKGBUILDDIR»/matc/src' gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT c3d.o -MD -MP -MF .deps/c3d.Tpo -c -o c3d.o c3d.c mv -f .deps/c3d.Tpo .deps/c3d.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT clip.o -MD -MP -MF .deps/clip.Tpo -c -o clip.o clip.c mv -f .deps/clip.Tpo .deps/clip.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT dri_ps.o -MD -MP -MF .deps/dri_ps.Tpo -c -o dri_ps.o dri_ps.c mv -f .deps/dri_ps.Tpo .deps/dri_ps.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT eig.o -MD -MP -MF .deps/eig.Tpo -c -o eig.o eig.c mv -f .deps/eig.Tpo .deps/eig.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT error.o -MD -MP -MF .deps/error.Tpo -c -o error.o error.c mv -f .deps/error.Tpo .deps/error.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT eval.o -MD -MP -MF .deps/eval.Tpo -c -o eval.o eval.c eval.c:488:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (fnc = fnc_check(name)) fnc_free_entry(fnc); ~~~~^~~~~~~~~~~~~~~~~ eval.c:488:17: note: place parentheses around the assignment to silence this warning if (fnc = fnc_check(name)) fnc_free_entry(fnc); ^ ( ) eval.c:488:17: note: use '==' to turn this assignment into an equality comparison if (fnc = fnc_check(name)) fnc_free_entry(fnc); ^ == eval.c:440:12: warning: 38 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(root->data) ^ 2 warnings generated. mv -f .deps/eval.Tpo .deps/eval.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT files.o -MD -MP -MF .deps/files.Tpo -c -o files.o files.c mv -f .deps/files.Tpo .deps/files.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT funcs.o -MD -MP -MF .deps/funcs.Tpo -c -o funcs.o funcs.c funcs.c:321:7: warning: add explicit braces to avoid dangling else [-Wdangling-else] else ^ 1 warning generated. mv -f .deps/funcs.Tpo .deps/funcs.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT gra.o -MD -MP -MF .deps/gra.Tpo -c -o gra.o gra.c mv -f .deps/gra.Tpo .deps/gra.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT gra_com.o -MD -MP -MF .deps/gra_com.Tpo -c -o gra_com.o gra_com.c mv -f .deps/gra_com.Tpo .deps/gra_com.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT jacobi.o -MD -MP -MF .deps/jacobi.Tpo -c -o jacobi.o jacobi.c mv -f .deps/jacobi.Tpo .deps/jacobi.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT lists.o -MD -MP -MF .deps/lists.Tpo -c -o lists.o lists.c mv -f .deps/lists.Tpo .deps/lists.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT lu.o -MD -MP -MF .deps/lu.Tpo -c -o lu.o lu.c mv -f .deps/lu.Tpo .deps/lu.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT matc.o -MD -MP -MF .deps/matc.Tpo -c -o matc.o matc.c matc.c:406:8: warning: implicit declaration of function 'isatty' is invalid in C99 [-Wimplicit-function-declaration] if (isatty(fileno(math_in)) && isatty(fileno(math_out))) ^ 1 warning generated. mv -f .deps/matc.Tpo .deps/matc.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT matrix.o -MD -MP -MF .deps/matrix.Tpo -c -o matrix.o matrix.c matrix.c:189:25: warning: implicit declaration of function 'time' is invalid in C99 [-Wimplicit-function-declaration] if (seed == 0) seed = time(NULL); ^ 1 warning generated. mv -f .deps/matrix.Tpo .deps/matrix.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT oper.o -MD -MP -MF .deps/oper.Tpo -c -o oper.o oper.c mv -f .deps/oper.Tpo .deps/oper.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT optim.o -MD -MP -MF .deps/optim.Tpo -c -o optim.o optim.c optim.c:146:26: warning: use of logical '&&' with constant operand [-Wconstant-logical-operand] if (com -> flags && CMDFLAG_CE) ^ ~~~~~~~~~~ optim.c:146:26: note: use '&' for a bitwise operation if (com -> flags && CMDFLAG_CE) ^~ & optim.c:146:26: note: remove constant to silence this warning if (com -> flags && CMDFLAG_CE) ~^~~~~~~~~~~~~ optim.c:537:12: warning: 38 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(cptr->data) ^ 2 warnings generated. mv -f .deps/optim.Tpo .deps/optim.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT parser.o -MD -MP -MF .deps/parser.Tpo -c -o parser.o parser.c parser.c:299:12: warning: 40 enumeration values not handled in switch: 'nullsym', 'rightpar', 'indopen'... [-Wswitch] switch(symbol) ^ parser.c:446:10: warning: 42 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:502:12: warning: 41 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:526:12: warning: 41 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:545:12: warning: 40 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:575:12: warning: 42 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:590:12: warning: 37 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:624:12: warning: 38 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:655:12: warning: 35 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:697:12: warning: 29 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:738:12: warning: 42 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:752:12: warning: 28 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:801:12: warning: 26 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ parser.c:854:12: warning: 25 enumeration values not handled in switch: 'nullsym', 'leftpar', 'rightpar'... [-Wswitch] switch(symbol) ^ 14 warnings generated. mv -f .deps/parser.Tpo .deps/parser.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT str.o -MD -MP -MF .deps/str.Tpo -c -o str.o str.c str.c:85:23: warning: format string is not a string literal (potentially insecure) [-Wformat-security] sprintf(str_pstr, fmt); ^~~ 1 warning generated. mv -f .deps/str.Tpo .deps/str.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT urand.o -MD -MP -MF .deps/urand.Tpo -c -o urand.o urand.c mv -f .deps/urand.Tpo .deps/urand.Po gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT variable.o -MD -MP -MF .deps/variable.Tpo -c -o variable.o variable.c mv -f .deps/variable.Tpo .deps/variable.Po rm -f libmatc.a ar cru libmatc.a c3d.o clip.o dri_ps.o eig.o error.o eval.o files.o funcs.o gra.o gra_com.o jacobi.o lists.o lu.o matc.o matrix.o oper.o optim.o parser.o str.o urand.o variable.o ranlib libmatc.a gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o main.c main.c:22:9: warning: implicit declaration of function 'mtc_init' is invalid in C99 [-Wimplicit-function-declaration] (void)mtc_init( stdin, stdout, stderr ); ^ main.c:23:17: warning: implicit declaration of function 'mtc_domath' is invalid in C99 [-Wimplicit-function-declaration] str = (char *)mtc_domath( "source(\"mc.ini\")" ); ^ main.c:23:9: warning: cast to 'char *' from smaller integer type 'int' [-Wint-to-pointer-cast] str = (char *)mtc_domath( "source(\"mc.ini\")" ); ^ main.c:49:44: warning: cast to 'char *' from smaller integer type 'int' [-Wint-to-pointer-cast] if ( *str ) fprintf( stdout, "%s\n", (char *)mtc_domath( str ) ); ^ main.c:52:7: warning: implicit declaration of function 'free' is invalid in C99 [-Wimplicit-function-declaration] free(str); ^ 5 warnings generated. mv -f .deps/main.Tpo .deps/main.Po gcc -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -o matc main.o libmatc.a -lreadline -lncurses -lcurses -lm -L/«PKGBUILDDIR»/debian/tmp/usr/lib make[3]: Leaving directory '/«PKGBUILDDIR»/matc/src' make[3]: Entering directory '/«PKGBUILDDIR»/matc' make[3]: Leaving directory '/«PKGBUILDDIR»/matc' make[2]: Leaving directory '/«PKGBUILDDIR»/matc' make[1]: Leaving directory '/«PKGBUILDDIR»/matc' INSTALLING ELMER MODULE matc make[1]: Entering directory '/«PKGBUILDDIR»/matc' Making install in src make[2]: Entering directory '/«PKGBUILDDIR»/matc/src' make[3]: Entering directory '/«PKGBUILDDIR»/matc/src' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/bin' /usr/bin/install -c matc '/«PKGBUILDDIR»/debian/tmp/usr/bin' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/lib' /usr/bin/install -c -m 644 libmatc.a '/«PKGBUILDDIR»/debian/tmp/usr/lib' ( cd '/«PKGBUILDDIR»/debian/tmp/usr/lib' && ranlib libmatc.a ) /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/include' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/include/elmer' /usr/bin/install -c -m 644 elmer/matc.h elmer/fnames.h elmer/gra.h '/«PKGBUILDDIR»/debian/tmp/usr/include/elmer' make[3]: Leaving directory '/«PKGBUILDDIR»/matc/src' make[2]: Leaving directory '/«PKGBUILDDIR»/matc/src' make[2]: Entering directory '/«PKGBUILDDIR»/matc' make[3]: Entering directory '/«PKGBUILDDIR»/matc' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/«PKGBUILDDIR»/matc' make[2]: Leaving directory '/«PKGBUILDDIR»/matc' make[1]: Leaving directory '/«PKGBUILDDIR»/matc' CONFIGURING ELMER MODULE elmerparam configure.in:21: warning: AC_CACHE_VAL(modsearch_opt, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:28: ee_FC_MODSEARCH_OPT is expanded from... configure.in:21: the top level configure.in:23: warning: AC_CACHE_VAL(modfilename, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:1: ee_FC_MODFILE is expanded from... configure.in:23: the top level configure.in:25: warning: AC_CACHE_VAL(iargc_decl, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:88: ee_IARGC_DECL is expanded from... configure.in:25: the top level configure.in:25: warning: AC_CACHE_VAL(iargc_decl, ...): suspicious presence of an AC_SUBST in the second argument, where no actions should be taken ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:88: ee_IARGC_DECL is expanded from... configure.in:25: the top level configure.in:45: warning: AC_CACHE_VAL(mex_ext, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:66: ee_MEXEXT is expanded from... configure.in:45: the top level configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-blas, --with-lapack, --with-mumps checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes /«PKGBUILDDIR»/elmerparam/missing: Unknown `--is-lightweight' option Try `/«PKGBUILDDIR»/elmerparam/missing --help' for more information configure: WARNING: 'missing' script is too old or missing checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for ranlib... ranlib checking for xlc... no checking for pathcc... no checking for icc... no checking for cc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking whether cc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of cc... gcc3 checking for xlf90... no checking for pathf90... no checking for ifort... no checking for f95... f95 checking whether we are using the GNU Fortran compiler... yes checking whether f95 accepts -g... yes checking how to get verbose linking output from f95... -v checking for Fortran libraries of f95... -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for option needed by f95 to find non-local *.mod-files... -I checking for *.mod-file naming convention... modulename.mod checking for iargc() declaration needed in Fortran code... !none iargc_decl = !none ./configure: line 4601: ACX_CHECK_B64FLAGS: command not found checking for R... yes checking for matlab... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/iargc_decl.inc config.status: creating src/R/elmerparam/src/Makevars config.status: creating src/R/Makefile config.status: creating src/matlab/Makefile config.status: creating test/Makefile config.status: creating test/make.inc config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-blas, --with-lapack, --with-mumps BUILDING ELMER MODULE elmerparam make[1]: Entering directory '/«PKGBUILDDIR»/elmerparam' (CDPATH="${ZSH_VERSION+.}:" && cd . && autoheader) configure.in:21: warning: AC_CACHE_VAL(modsearch_opt, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:28: ee_FC_MODSEARCH_OPT is expanded from... configure.in:21: the top level configure.in:23: warning: AC_CACHE_VAL(modfilename, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:1: ee_FC_MODFILE is expanded from... configure.in:23: the top level configure.in:25: warning: AC_CACHE_VAL(iargc_decl, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:88: ee_IARGC_DECL is expanded from... configure.in:25: the top level configure.in:25: warning: AC_CACHE_VAL(iargc_decl, ...): suspicious presence of an AC_SUBST in the second argument, where no actions should be taken ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:88: ee_IARGC_DECL is expanded from... configure.in:25: the top level configure.in:45: warning: AC_CACHE_VAL(mex_ext, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acinclude.m4:66: ee_MEXEXT is expanded from... configure.in:45: the top level rm -f stamp-h1 touch config.h.in cd . && /bin/bash ./config.status config.h config.status: creating config.h make all-recursive make[2]: Entering directory '/«PKGBUILDDIR»/elmerparam' Making all in src make[3]: Entering directory '/«PKGBUILDDIR»/elmerparam/src' Making all in . make[4]: Entering directory '/«PKGBUILDDIR»/elmerparam/src' cc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -MT elmerparam.o -MD -MP -MF .deps/elmerparam.Tpo -c -o elmerparam.o elmerparam.c mv -f .deps/elmerparam.Tpo .deps/elmerparam.Po cc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -MT modelline.o -MD -MP -MF .deps/modelline.Tpo -c -o modelline.o modelline.c mv -f .deps/modelline.Tpo .deps/modelline.Po cc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -MT dynarray.o -MD -MP -MF .deps/dynarray.Tpo -c -o dynarray.o dynarray.c mv -f .deps/dynarray.Tpo .deps/dynarray.Po rm -f libelmerparam.a ar cru libelmerparam.a elmerparam.o modelline.o dynarray.o ranlib libelmerparam.a f95 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -c -o elmerparamf.o elmerparamf.f90 rm -f libelmerparamf.a ar cru libelmerparamf.a elmerparamf.o ranlib libelmerparamf.a f95 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -c -o ElmerParam.o ElmerParam.f90 f95 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -o ElmerParam ElmerParam.o libelmerparamf.a libelmerparam.a -L/usr/lib -lmatc -L/«PKGBUILDDIR»/debian/tmp/usr/lib make[4]: Leaving directory '/«PKGBUILDDIR»/elmerparam/src' Making all in R make[4]: Entering directory '/«PKGBUILDDIR»/elmerparam/src/R' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/«PKGBUILDDIR»/elmerparam/src/R' make[3]: Leaving directory '/«PKGBUILDDIR»/elmerparam/src' Making all in test make[3]: Entering directory '/«PKGBUILDDIR»/elmerparam/test' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/«PKGBUILDDIR»/elmerparam/test' make[3]: Entering directory '/«PKGBUILDDIR»/elmerparam' make[3]: Leaving directory '/«PKGBUILDDIR»/elmerparam' make[2]: Leaving directory '/«PKGBUILDDIR»/elmerparam' make[1]: Leaving directory '/«PKGBUILDDIR»/elmerparam' INSTALLING ELMER MODULE elmerparam make[1]: Entering directory '/«PKGBUILDDIR»/elmerparam' Making install in src make[2]: Entering directory '/«PKGBUILDDIR»/elmerparam/src' Making install in . make[3]: Entering directory '/«PKGBUILDDIR»/elmerparam/src' make[4]: Entering directory '/«PKGBUILDDIR»/elmerparam/src' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/bin' /usr/bin/install -c ElmerParam '/«PKGBUILDDIR»/debian/tmp/usr/bin' /usr/bin/install -c elmerparam.mod /«PKGBUILDDIR»/debian/tmp/usr/include /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/lib' /usr/bin/install -c -m 644 libelmerparam.a libelmerparamf.a '/«PKGBUILDDIR»/debian/tmp/usr/lib' ( cd '/«PKGBUILDDIR»/debian/tmp/usr/lib' && ranlib libelmerparam.a ) ( cd '/«PKGBUILDDIR»/debian/tmp/usr/lib' && ranlib libelmerparamf.a ) /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/include' /usr/bin/install -c -m 644 elmerparam.h '/«PKGBUILDDIR»/debian/tmp/usr/include' make[4]: Leaving directory '/«PKGBUILDDIR»/elmerparam/src' make[3]: Leaving directory '/«PKGBUILDDIR»/elmerparam/src' Making install in R make[3]: Entering directory '/«PKGBUILDDIR»/elmerparam/src/R' R CMD build elmerparam * checking for file 'elmerparam/DESCRIPTION' ... OK * preparing 'elmerparam': * checking DESCRIPTION meta-information ... OK * cleaning src Warning: /tmp/RtmpfYtElZ/Rbuild310922d57eb2/elmerparam/man/elmerparam.Rd:29: unexpected section header '\section' * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'elmerparam_1.0.tar.gz' test -z "/«PKGBUILDDIR»/debian/tmp/usr/lib/R" || mkdir -p /«PKGBUILDDIR»/debian/tmp/usr/lib/R R CMD INSTALL -l /«PKGBUILDDIR»/debian/tmp/usr/lib/R elmerparam * installing *source* package 'elmerparam' ... ** libs make[4]: Entering directory '/«PKGBUILDDIR»/elmerparam/src/R/elmerparam/src' gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I/usr/include -I/«PKGBUILDDIR»/debian/tmp/usr/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c elmerparam_rwrapper.c -o elmerparam_rwrapper.o elmerparam_rwrapper.c:55:8: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] tagp = CHAR(tag); ^ ~~~~~~~~~ 1 warning generated. gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o elmerparam.so elmerparam_rwrapper.o -L/usr/lib -L/«PKGBUILDDIR»/debian/tmp/usr/lib -lelmerparam -lmatc -L/usr/lib/R/lib -lR make[4]: Leaving directory '/«PKGBUILDDIR»/elmerparam/src/R/elmerparam/src' installing to /«PKGBUILDDIR»/debian/tmp/usr/lib/R/elmerparam/libs ** R ** preparing package for lazy loading ** help Warning: /«PKGBUILDDIR»/elmerparam/src/R/elmerparam/man/elmer-package.Rd:33: All text must be in a section Warning: /«PKGBUILDDIR»/elmerparam/src/R/elmerparam/man/elmerparam.Rd:29: unexpected section header '\section' *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (elmerparam) make[3]: Leaving directory '/«PKGBUILDDIR»/elmerparam/src/R' make[2]: Leaving directory '/«PKGBUILDDIR»/elmerparam/src' Making install in test make[2]: Entering directory '/«PKGBUILDDIR»/elmerparam/test' make[3]: Entering directory '/«PKGBUILDDIR»/elmerparam/test' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/«PKGBUILDDIR»/elmerparam/test' make[2]: Leaving directory '/«PKGBUILDDIR»/elmerparam/test' make[2]: Entering directory '/«PKGBUILDDIR»/elmerparam' make[3]: Entering directory '/«PKGBUILDDIR»/elmerparam' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/«PKGBUILDDIR»/elmerparam' make[2]: Leaving directory '/«PKGBUILDDIR»/elmerparam' make[1]: Leaving directory '/«PKGBUILDDIR»/elmerparam' CONFIGURING ELMER MODULE hutiter configure.in:62: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_blas.m4:33: ACX_BLAS is expanded from... configure.in:62: the top level configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-lapack, --with-mumps checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes /«PKGBUILDDIR»/hutiter/missing: Unknown `--is-lightweight' option Try `/«PKGBUILDDIR»/hutiter/missing --help' for more information configure: WARNING: 'missing' script is too old or missing checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for default compilation flags... optimized checking for xlc... no checking for pathcc... no checking for icc... no checking for cc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking whether cc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of cc... gcc3 checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking how to run the C preprocessor... cc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for ranlib... ranlib checking for ar... ar checking for ar flags... cru checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for 64 bit compilation flags... let's see what happens checking for 64 bit CFLAGS... -m64 -fPIC checking for 64 bit FCFLAGS... -m64 -fPIC checking for 64 bit FFLAGS... -m64 -fPIC checking size of void*... 8 checking to see if we got 64 bits... oh yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether we are using the Microsoft C compiler... no checking for e_wsfe in -lg2c... no checking for saxpy_ in -lblas... checking for in ... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating include/Makefile config.status: creating examples/Makefile config.status: creating examples/ex1/Makefile config.status: creating src/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-lapack, --with-mumps BUILDING ELMER MODULE hutiter make[1]: Entering directory '/«PKGBUILDDIR»/hutiter' make all-recursive make[2]: Entering directory '/«PKGBUILDDIR»/hutiter' Making all in src make[3]: Entering directory '/«PKGBUILDDIR»/hutiter/src' gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_aux_C.o huti_aux_C.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_aux_D.o huti_aux_D.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_aux_S.o huti_aux_S.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_aux_Z.o huti_aux_Z.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_bicgstab_2_C.o huti_bicgstab_2_C.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_bicgstab_2_D.o huti_bicgstab_2_D.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_bicgstab_2_S.o huti_bicgstab_2_S.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_bicgstab_2_Z.o huti_bicgstab_2_Z.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_bicgstab_C.o huti_bicgstab_C.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_bicgstab_D.o huti_bicgstab_D.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_bicgstab_S.o huti_bicgstab_S.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_bicgstab_Z.o huti_bicgstab_Z.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_cg_C.o huti_cg_C.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_cg_D.o huti_cg_D.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_cgs_C.o huti_cgs_C.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_cgs_D.o huti_cgs_D.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_cg_S.o huti_cg_S.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_cgs_S.o huti_cgs_S.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_cgs_Z.o huti_cgs_Z.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_cg_Z.o huti_cg_Z.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_gmres_C.o huti_gmres_C.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_gmres_D.o huti_gmres_D.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_gmres_S.o huti_gmres_S.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_gmres_Z.o huti_gmres_Z.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_qmr_C.o huti_qmr_C.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_qmr_D.o huti_qmr_D.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_qmr_S.o huti_qmr_S.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_qmr_Z.o huti_qmr_Z.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_tfqmr_C.o huti_tfqmr_C.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_tfqmr_D.o huti_tfqmr_D.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_tfqmr_S.o huti_tfqmr_S.F90 cc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I/usr/include -MT huti_main.o -MD -MP -MF .deps/huti_main.Tpo -c -o huti_main.o huti_main.c mv -f .deps/huti_main.Tpo .deps/huti_main.Po cc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I/usr/include -MT huti_sfe_c_C.o -MD -MP -MF .deps/huti_sfe_c_C.Tpo -c -o huti_sfe_c_C.o huti_sfe_c_C.c huti_sfe_c_C.c:124:3: warning: implicit declaration of function 'HUTI_Init' is invalid in C99 [-Wimplicit-function-declaration] HUTI_Init(); ^ 1 warning generated. mv -f .deps/huti_sfe_c_C.Tpo .deps/huti_sfe_c_C.Po cc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I/usr/include -MT huti_sfe_c_D.o -MD -MP -MF .deps/huti_sfe_c_D.Tpo -c -o huti_sfe_c_D.o huti_sfe_c_D.c huti_sfe_c_D.c:124:3: warning: implicit declaration of function 'HUTI_Init' is invalid in C99 [-Wimplicit-function-declaration] HUTI_Init(); ^ 1 warning generated. mv -f .deps/huti_sfe_c_D.Tpo .deps/huti_sfe_c_D.Po cc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I/usr/include -MT huti_sfe_c_S.o -MD -MP -MF .deps/huti_sfe_c_S.Tpo -c -o huti_sfe_c_S.o huti_sfe_c_S.c huti_sfe_c_S.c:124:3: warning: implicit declaration of function 'HUTI_Init' is invalid in C99 [-Wimplicit-function-declaration] HUTI_Init(); ^ 1 warning generated. mv -f .deps/huti_sfe_c_S.Tpo .deps/huti_sfe_c_S.Po cc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I/usr/include -MT huti_sfe_c_Z.o -MD -MP -MF .deps/huti_sfe_c_Z.Tpo -c -o huti_sfe_c_Z.o huti_sfe_c_Z.c huti_sfe_c_Z.c:125:3: warning: implicit declaration of function 'HUTI_Init' is invalid in C99 [-Wimplicit-function-declaration] HUTI_Init(); ^ 1 warning generated. mv -f .deps/huti_sfe_c_Z.Tpo .deps/huti_sfe_c_Z.Po gfortran -DHAVE_CONFIG_H -I. -I.. -I../include -I../include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -I. -I/usr/include -c -o huti_tfqmr_Z.o huti_tfqmr_Z.F90 rm -f libhuti.a ar cru libhuti.a huti_aux_C.o huti_aux_D.o huti_aux_S.o huti_aux_Z.o huti_bicgstab_2_C.o huti_bicgstab_2_D.o huti_bicgstab_2_S.o huti_bicgstab_2_Z.o huti_bicgstab_C.o huti_bicgstab_D.o huti_bicgstab_S.o huti_bicgstab_Z.o huti_cg_C.o huti_cg_D.o huti_cgs_C.o huti_cgs_D.o huti_cg_S.o huti_cgs_S.o huti_cgs_Z.o huti_cg_Z.o huti_gmres_C.o huti_gmres_D.o huti_gmres_S.o huti_gmres_Z.o huti_qmr_C.o huti_qmr_D.o huti_qmr_S.o huti_qmr_Z.o huti_tfqmr_C.o huti_tfqmr_D.o huti_tfqmr_S.o huti_main.o huti_sfe_c_C.o huti_sfe_c_D.o huti_sfe_c_S.o huti_sfe_c_Z.o huti_tfqmr_Z.o ranlib libhuti.a make[3]: Leaving directory '/«PKGBUILDDIR»/hutiter/src' Making all in include make[3]: Entering directory '/«PKGBUILDDIR»/hutiter/include' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/«PKGBUILDDIR»/hutiter/include' Making all in examples make[3]: Entering directory '/«PKGBUILDDIR»/hutiter/examples' Making all in ex1 make[4]: Entering directory '/«PKGBUILDDIR»/hutiter/examples/ex1' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/«PKGBUILDDIR»/hutiter/examples/ex1' make[4]: Entering directory '/«PKGBUILDDIR»/hutiter/examples' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/«PKGBUILDDIR»/hutiter/examples' make[3]: Leaving directory '/«PKGBUILDDIR»/hutiter/examples' make[3]: Entering directory '/«PKGBUILDDIR»/hutiter' make[3]: Leaving directory '/«PKGBUILDDIR»/hutiter' make[2]: Leaving directory '/«PKGBUILDDIR»/hutiter' make[1]: Leaving directory '/«PKGBUILDDIR»/hutiter' INSTALLING ELMER MODULE hutiter make[1]: Entering directory '/«PKGBUILDDIR»/hutiter' Making install in src make[2]: Entering directory '/«PKGBUILDDIR»/hutiter/src' make[3]: Entering directory '/«PKGBUILDDIR»/hutiter/src' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/lib' /usr/bin/install -c -m 644 libhuti.a '/«PKGBUILDDIR»/debian/tmp/usr/lib' ( cd '/«PKGBUILDDIR»/debian/tmp/usr/lib' && ranlib libhuti.a ) make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/«PKGBUILDDIR»/hutiter/src' make[2]: Leaving directory '/«PKGBUILDDIR»/hutiter/src' Making install in include make[2]: Entering directory '/«PKGBUILDDIR»/hutiter/include' make[3]: Entering directory '/«PKGBUILDDIR»/hutiter/include' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/include' /usr/bin/install -c -m 644 huti_defs.h huti_fdefs.h '/«PKGBUILDDIR»/debian/tmp/usr/include' make[3]: Leaving directory '/«PKGBUILDDIR»/hutiter/include' make[2]: Leaving directory '/«PKGBUILDDIR»/hutiter/include' Making install in examples make[2]: Entering directory '/«PKGBUILDDIR»/hutiter/examples' Making install in ex1 make[3]: Entering directory '/«PKGBUILDDIR»/hutiter/examples/ex1' make[4]: Entering directory '/«PKGBUILDDIR»/hutiter/examples/ex1' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/«PKGBUILDDIR»/hutiter/examples/ex1' make[3]: Leaving directory '/«PKGBUILDDIR»/hutiter/examples/ex1' make[3]: Entering directory '/«PKGBUILDDIR»/hutiter/examples' make[4]: Entering directory '/«PKGBUILDDIR»/hutiter/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/«PKGBUILDDIR»/hutiter/examples' make[3]: Leaving directory '/«PKGBUILDDIR»/hutiter/examples' make[2]: Leaving directory '/«PKGBUILDDIR»/hutiter/examples' make[2]: Entering directory '/«PKGBUILDDIR»/hutiter' make[3]: Entering directory '/«PKGBUILDDIR»/hutiter' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/«PKGBUILDDIR»/hutiter' make[2]: Leaving directory '/«PKGBUILDDIR»/hutiter' make[1]: Leaving directory '/«PKGBUILDDIR»/hutiter' CONFIGURING ELMER MODULE meshgen2d configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-blas, --with-lapack, --with-mumps checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes /«PKGBUILDDIR»/meshgen2d/missing: Unknown `--is-lightweight' option Try `/«PKGBUILDDIR»/meshgen2d/missing --help' for more information configure: WARNING: 'missing' script is too old or missing checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for default compilation flags... optimized checking for answer to meaning of life... 42 checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for main in -lstdc++... yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking whether to enable maintainer-specific portions of Makefiles... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/include/Makefile config.status: creating src/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --with-metis, --with-mpi-dir, --with-mpi-inc-dir, --with-blas, --with-lapack, --with-mumps BUILDING ELMER MODULE meshgen2d make[1]: Entering directory '/«PKGBUILDDIR»/meshgen2d' make all-recursive make[2]: Entering directory '/«PKGBUILDDIR»/meshgen2d' Making all in src make[3]: Entering directory '/«PKGBUILDDIR»/meshgen2d/src' Making all in include make[4]: Entering directory '/«PKGBUILDDIR»/meshgen2d/src/include' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/«PKGBUILDDIR»/meshgen2d/src/include' make[4]: Entering directory '/«PKGBUILDDIR»/meshgen2d/src' g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT BGGridMesh.o -MD -MP -MF .deps/BGGridMesh.Tpo -c -o BGGridMesh.o BGGridMesh.cpp mv -f .deps/BGGridMesh.Tpo .deps/BGGridMesh.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT BGTriangleMesh.o -MD -MP -MF .deps/BGTriangleMesh.Tpo -c -o BGTriangleMesh.o BGTriangleMesh.cpp mv -f .deps/BGTriangleMesh.Tpo .deps/BGTriangleMesh.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT BGVertex.o -MD -MP -MF .deps/BGVertex.Tpo -c -o BGVertex.o BGVertex.cpp mv -f .deps/BGVertex.Tpo .deps/BGVertex.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT Body.o -MD -MP -MF .deps/Body.Tpo -c -o Body.o Body.cpp mv -f .deps/Body.Tpo .deps/Body.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT BoundaryElement.o -MD -MP -MF .deps/BoundaryElement.Tpo -c -o BoundaryElement.o BoundaryElement.cpp mv -f .deps/BoundaryElement.Tpo .deps/BoundaryElement.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT BoundaryLayer.o -MD -MP -MF .deps/BoundaryLayer.Tpo -c -o BoundaryLayer.o BoundaryLayer.cpp mv -f .deps/BoundaryLayer.Tpo .deps/BoundaryLayer.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT Connect.o -MD -MP -MF .deps/Connect.Tpo -c -o Connect.o Connect.cpp mv -f .deps/Connect.Tpo .deps/Connect.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT Element.o -MD -MP -MF .deps/Element.Tpo -c -o Element.o Element.cpp mv -f .deps/Element.Tpo .deps/Element.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT GeometryEdge.o -MD -MP -MF .deps/GeometryEdge.Tpo -c -o GeometryEdge.o GeometryEdge.cpp mv -f .deps/GeometryEdge.Tpo .deps/GeometryEdge.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o main.cpp mv -f .deps/main.Tpo .deps/main.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT Mesh.o -MD -MP -MF .deps/Mesh.Tpo -c -o Mesh.o Mesh.cpp mv -f .deps/Mesh.Tpo .deps/Mesh.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT MeshNode.o -MD -MP -MF .deps/MeshNode.Tpo -c -o MeshNode.o MeshNode.cpp mv -f .deps/MeshNode.Tpo .deps/MeshNode.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT MeshParser.o -MD -MP -MF .deps/MeshParser.Tpo -c -o MeshParser.o MeshParser.cpp MeshParser.cpp:368:25: warning: '&&' within '||' [-Wlogical-op-parentheses] loop->direction != 1 && loop->direction != -1 ) return 0; ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ MeshParser.cpp:368:25: note: place parentheses around the '&&' expression to silence this warning loop->direction != 1 && loop->direction != -1 ) return 0; ^ ( ) 1 warning generated. mv -f .deps/MeshParser.Tpo .deps/MeshParser.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT Node.o -MD -MP -MF .deps/Node.Tpo -c -o Node.o Node.cpp mv -f .deps/Node.Tpo .deps/Node.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT PQ.o -MD -MP -MF .deps/PQ.Tpo -c -o PQ.o PQ.cpp mv -f .deps/PQ.Tpo .deps/PQ.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT QuadElement.o -MD -MP -MF .deps/QuadElement.Tpo -c -o QuadElement.o QuadElement.cpp mv -f .deps/QuadElement.Tpo .deps/QuadElement.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT QuadLayer.o -MD -MP -MF .deps/QuadLayer.Tpo -c -o QuadLayer.o QuadLayer.cpp mv -f .deps/QuadLayer.Tpo .deps/QuadLayer.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT SSMFVoronoiSegment.o -MD -MP -MF .deps/SSMFVoronoiSegment.Tpo -c -o SSMFVoronoiSegment.o SSMFVoronoiSegment.cpp mv -f .deps/SSMFVoronoiSegment.Tpo .deps/SSMFVoronoiSegment.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT SSSFVoronoiSegment.o -MD -MP -MF .deps/SSSFVoronoiSegment.Tpo -c -o SSSFVoronoiSegment.o SSSFVoronoiSegment.cpp mv -f .deps/SSSFVoronoiSegment.Tpo .deps/SSSFVoronoiSegment.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT TriangleElement.o -MD -MP -MF .deps/TriangleElement.Tpo -c -o TriangleElement.o TriangleElement.cpp mv -f .deps/TriangleElement.Tpo .deps/TriangleElement.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT TriangleNELayer.o -MD -MP -MF .deps/TriangleNELayer.Tpo -c -o TriangleNELayer.o TriangleNELayer.cpp mv -f .deps/TriangleNELayer.Tpo .deps/TriangleNELayer.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT Vertex.o -MD -MP -MF .deps/Vertex.Tpo -c -o Vertex.o Vertex.cpp mv -f .deps/Vertex.Tpo .deps/Vertex.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT VoronoiSegment.o -MD -MP -MF .deps/VoronoiSegment.Tpo -c -o VoronoiSegment.o VoronoiSegment.cpp mv -f .deps/VoronoiSegment.Tpo .deps/VoronoiSegment.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT VoronoiVertex.o -MD -MP -MF .deps/VoronoiVertex.Tpo -c -o VoronoiVertex.o VoronoiVertex.cpp mv -f .deps/VoronoiVertex.Tpo .deps/VoronoiVertex.Po g++ -DHAVE_CONFIG_H -I. -I.. -I./include -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -MT VSVertex.o -MD -MP -MF .deps/VSVertex.Tpo -c -o VSVertex.o VSVertex.cpp mv -f .deps/VSVertex.Tpo .deps/VSVertex.Po g++ -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -o ElmerMesh2D BGGridMesh.o BGTriangleMesh.o BGVertex.o Body.o BoundaryElement.o BoundaryLayer.o Connect.o Element.o GeometryEdge.o main.o Mesh.o MeshNode.o MeshParser.o Node.o PQ.o QuadElement.o QuadLayer.o SSMFVoronoiSegment.o SSSFVoronoiSegment.o TriangleElement.o TriangleNELayer.o Vertex.o VoronoiSegment.o VoronoiVertex.o VSVertex.o -lstdc++ -L/«PKGBUILDDIR»/debian/tmp/usr/lib g++ -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -o Mesh2D BGGridMesh.o BGTriangleMesh.o BGVertex.o Body.o BoundaryElement.o BoundaryLayer.o Connect.o Element.o GeometryEdge.o main.o Mesh.o MeshNode.o MeshParser.o Node.o PQ.o QuadElement.o QuadLayer.o SSMFVoronoiSegment.o SSSFVoronoiSegment.o TriangleElement.o TriangleNELayer.o Vertex.o VoronoiSegment.o VoronoiVertex.o VSVertex.o -lstdc++ -L/«PKGBUILDDIR»/debian/tmp/usr/lib make[4]: Leaving directory '/«PKGBUILDDIR»/meshgen2d/src' make[3]: Leaving directory '/«PKGBUILDDIR»/meshgen2d/src' make[3]: Entering directory '/«PKGBUILDDIR»/meshgen2d' make[3]: Leaving directory '/«PKGBUILDDIR»/meshgen2d' make[2]: Leaving directory '/«PKGBUILDDIR»/meshgen2d' make[1]: Leaving directory '/«PKGBUILDDIR»/meshgen2d' INSTALLING ELMER MODULE meshgen2d make[1]: Entering directory '/«PKGBUILDDIR»/meshgen2d' Making install in src make[2]: Entering directory '/«PKGBUILDDIR»/meshgen2d/src' Making install in include make[3]: Entering directory '/«PKGBUILDDIR»/meshgen2d/src/include' make[4]: Entering directory '/«PKGBUILDDIR»/meshgen2d/src/include' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/«PKGBUILDDIR»/meshgen2d/src/include' make[3]: Leaving directory '/«PKGBUILDDIR»/meshgen2d/src/include' make[3]: Entering directory '/«PKGBUILDDIR»/meshgen2d/src' make[4]: Entering directory '/«PKGBUILDDIR»/meshgen2d/src' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/bin' /usr/bin/install -c ElmerMesh2D Mesh2D '/«PKGBUILDDIR»/debian/tmp/usr/bin' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/«PKGBUILDDIR»/meshgen2d/src' make[3]: Leaving directory '/«PKGBUILDDIR»/meshgen2d/src' make[2]: Leaving directory '/«PKGBUILDDIR»/meshgen2d/src' make[2]: Entering directory '/«PKGBUILDDIR»/meshgen2d' make[3]: Entering directory '/«PKGBUILDDIR»/meshgen2d' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/«PKGBUILDDIR»/meshgen2d' make[2]: Leaving directory '/«PKGBUILDDIR»/meshgen2d' make[1]: Leaving directory '/«PKGBUILDDIR»/meshgen2d' CONFIGURING ELMER MODULE fem configure.in:47: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... acx_elmer.m4:1347: ACX_FC_CHAR_MANGLING is expanded from... configure.in:47: the top level configure.in:54: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:1578: ACX_SHLIB_STUFF is expanded from... configure.in:54: the top level configure.in:101: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_blas.m4:33: ACX_BLAS is expanded from... configure.in:101: the top level configure.in:102: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_lapack.m4:31: ACX_LAPACK is expanded from... configure.in:102: the top level configure.in:103: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:131: ACX_HUTI is expanded from... configure.in:103: the top level configure.in:104: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:238: ACX_EIOF is expanded from... configure.in:104: the top level configure.in:105: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:411: ACX_ARPACK is expanded from... configure.in:105: the top level configure.in:107: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:633: ACX_HYPRE is expanded from... configure.in:107: the top level configure.in:108: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:714: ACX_MUMPS is expanded from... configure.in:108: the top level configure.in:109: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... acx_elmer.m4:553: ACX_UMFPACK is expanded from... configure.in:109: the top level configure.in:150: warning: AC_CACHE_VAL(modfilename, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_elmer.m4:2105: ACX_FC_MODFILE is expanded from... configure.in:150: the top level configure.in:152: warning: AC_CACHE_VAL(modput_opt, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_elmer.m4:2134: ACX_FC_PUT_MODULE_FLAG is expanded from... configure.in:152: the top level configure: WARNING: unrecognized options: --with-metis checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes /«PKGBUILDDIR»/fem/missing: Unknown `--is-lightweight' option Try `/«PKGBUILDDIR»/fem/missing --help' for more information configure: WARNING: 'missing' script is too old or missing checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for ftello... yes checking for fseeko... yes checking for answer to meaning of life... 42 checking for default compilation flags... optimized checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking for xlC... no checking for pathCC... no checking for icc... no checking for CC... no checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking for ranlib... ranlib checking for ar... ar checking for ar flags... cru checking whether we are using the Microsoft C compiler... no checking for /lib/cpp... yes checking for C++ linker flags... -L/usr/bin/../lib/gcc/x86_64-linux-gnu/4.9 -L/usr/bin/../lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/lib/x86_64-linux-gnu -L/lib/../lib64 -L/usr/lib/x86_64-linux-gnu -L/usr/bin/../lib/gcc/x86_64-linux-gnu/4.9/../../.. -L/usr/lib/llvm-3.6/bin/../lib -L/lib -L/usr/lib -lstdc++ -lm -lgcc_s -lgcc_s checking how to run the C preprocessor... /lib/cpp checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for 64 bit compilation flags... let's see what happens checking for 64 bit CFLAGS... -m64 -fPIC checking for 64 bit FCFLAGS... -m64 -fPIC checking for 64 bit CXXFLAGS... -m64 -fPIC checking for 64 bit FFLAGS... -m64 -fPIC checking size of void*... 8 checking to see if we got 64 bits... oh yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for Fortran char* mangling scheme... char_ptr checking if fortran implements CONTIGUOUS attribute... yes checking for fortran intrinsic etime... found checking for fortran intrinsic flush... found checking for shl_load in -ldld... no checking for shl_load... no checking for shl_findsym... no checking for dlopen in -ldl... yes checking for dlopen... yes checking for dlsym... yes checking for dlerror... yes checking for dlclose... yes checking for mpi-directory... /usr checking for mpi-lib-directory... /usr/lib checking for mpi-inc-directory... /usr/include/mpi checking for mpi-library... checking for mpi-include... checking for compilation of an MPI program... seems ok checking for mpf90... no checking for mpxlf90... no checking for saxpy_ in -lblas... checking for in ... yes checking for cheev_ in -llapack... yes checking for huti_d_gmres_ in -lhuti... yes checking for eio_init_ in -leiof... yes checking for dseupd_ in -larpack... yes checking for pdneupd_ in -lparpack... yes checking for HYPRE_IJMatrixCreate in -lHYPRE_IJ_mv... yes checking for dmumps_ in -ldmumps_scotch... yes checking for umfpack_di_defaults in -lumfpack... yes checking for mtc_init in -lmatc... yes checking for main in -lm... yes checking for *.mod-file naming convention... modulename.mod checking for option to tell gfortran where to put *.mod-files... -J checking size of off_t... 8 ./configure: line 13314: 0: command not found defining FPICFLAG to be -fPIC defining CPICFLAG to be -fPIC defining CXXPICFLAG to be -fPIC defining SHLEXT to be so defining SHLLIB to be $(SHLEXT) defining SHLBIN to be defining SHLEXT_VER to be $(SHLEXT).$(version) defining SHLLIB_VER to be $(SHLLIB).$(version) defining SHLBIN_VER to be $(SHLBIN).$(version) defining SHLLINKEXT to be defining DLFCN_DIR to be defining SH_LD to be gfortran defining SH_LDFLAGS to be -shared defining SH_LINKING_TO_FLAGS to be -m64 -fPIC defining DL_LD to be $(SH_LD) defining DL_LDFLAGS to be $(SH_LDFLAGS) defining MKOCTFILE_DL_LDFLAGS to be defining SONAME_FLAGS to be defining NO_OCT_FILE_STRIP to be defining RLD_FLAG to be defining TEMPLATE_AR to be defining TEMPLATE_ARFLAGS to be defining library_path_var to be defining FCPPFLAGS to be -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS defining LIBSOLVER_DEPS to be -L/«PKGBUILDDIR»/debian/tmp/usr/lib defining OFF_KIND to be selected_int_kind(18) defining LONG_KIND to be checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating tests/runtests config.status: creating src/elmerf90 config.status: creating src/elmerf90-nosh config.status: creating src/elmerld config.status: creating Makefile config.status: creating Makeconf config.status: creating src/Makefile config.status: creating src/view3d/Makefile config.status: creating src/viewaxis/Makefile config.status: creating src/binio/Makefile config.status: creating src/binio/kinds.f90 config.status: creating src/binio/test/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --with-metis ELMER build options: Version 6.1 Install prefix /usr CPPFLAGS -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi FCPPFLAGS -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS CFLAGS -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi CXXFLAGS -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -fPIC FCFLAGS -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include FFLAGS -O -m64 -fPIC -fPIC -I. -I/usr/include/mpi LDFLAGS -L. -L/usr/lib LIBS -L. -ldl -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib -lm SOLVER_LIBS -L. -ldl -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib -lm -larpack -lparpack -lHYPRE_Euclid -lHYPRE_parcsr_ls -lHYPRE_ParaSails -lHYPRE_IJ_mv -ldmumps_scotch -lumfpack -lamd -lhuti -lmatc -leiof -L. -ldl -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib -lm -llapack -lblas -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lgfortran -lm -lquadmath -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lgfortran -lm -lquadmath -L/usr/bin/../lib/gcc/x86_64-linux-gnu/4.9 -L/usr/bin/../lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/lib/x86_64-linux-gnu -L/lib/../lib64 -L/usr/lib/x86_64-linux-gnu -L/usr/bin/../lib/gcc/x86_64-linux-gnu/4.9/../../.. -L/usr/lib/llvm-3.6/bin/../lib -L/lib -L/usr/lib -lstdc++ -lm -lgcc_s -lgcc_s Compilers: Fortran 90 compiler gfortran Fortran 77 compiler gfortran CC gcc C++ g++ CPP /lib/cpp Libs: BLAS -lblas LAPACK -llapack HYPRE -lHYPRE_Euclid -lHYPRE_parcsr_ls -lHYPRE_ParaSails -lHYPRE_IJ_mv MUMPS -ldmumps_scotch UMFPACK -lumfpack -lamd ARPACK -larpack PARPACK -lparpack HUTI -lhuti EIO -leiof MPI -L/usr/lib MPI: yes BUILDING ELMER MODULE fem make[1]: Entering directory '/«PKGBUILDDIR»/fem' make all-recursive make[2]: Entering directory '/«PKGBUILDDIR»/fem' Making all in src make[3]: Entering directory '/«PKGBUILDDIR»/fem/src' Making all in view3d make[4]: Entering directory '/«PKGBUILDDIR»/fem/src/view3d' gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT ViewFactors.o -MD -MP -MF .deps/ViewFactors.Tpo -c -o ViewFactors.o ViewFactors.c ViewFactors.c:486:4: warning: implicit declaration of function 'elm_4node_quad_shape_functions' is invalid in C99 [-Wimplicit-function-declaration] elm_4node_quad_shape_functions( ShapeFunctionMatrix4 ); ^ 1 warning generated. mv -f .deps/ViewFactors.Tpo .deps/ViewFactors.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT TestModel.o -MD -MP -MF .deps/TestModel.Tpo -c -o TestModel.o TestModel.c TestModel.c:254:35: warning: format specifies type 'int' but the argument has type 'unsigned long' [-Wformat] fprintf( stderr, "SIZE: %d\n", NElements*sizeof(Geometry_t) ); ~~ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ %lu 1 warning generated. mv -f .deps/TestModel.Tpo .deps/TestModel.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT LineUtil.o -MD -MP -MF .deps/LineUtil.Tpo -c -o LineUtil.o LineUtil.c mv -f .deps/LineUtil.Tpo .deps/LineUtil.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT TriangleUtil.o -MD -MP -MF .deps/TriangleUtil.Tpo -c -o TriangleUtil.o TriangleUtil.c mv -f .deps/TriangleUtil.Tpo .deps/TriangleUtil.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT BiLinearUtil.o -MD -MP -MF .deps/BiLinearUtil.Tpo -c -o BiLinearUtil.o BiLinearUtil.c mv -f .deps/BiLinearUtil.Tpo .deps/BiLinearUtil.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT BiQuadraticUtil.o -MD -MP -MF .deps/BiQuadraticUtil.Tpo -c -o BiQuadraticUtil.o BiQuadraticUtil.c mv -f .deps/BiQuadraticUtil.Tpo .deps/BiQuadraticUtil.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT BiCubicUtil.o -MD -MP -MF .deps/BiCubicUtil.Tpo -c -o BiCubicUtil.o BiCubicUtil.c mv -f .deps/BiCubicUtil.Tpo .deps/BiCubicUtil.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT RayTrace.o -MD -MP -MF .deps/RayTrace.Tpo -c -o RayTrace.o RayTrace.c RayTrace.c:78:24: warning: '&&' within '||' [-Wlogical-op-parentheses] BBox->XMin>Fx && BBox->XMin>Tx || BBox->XMaxXMaxXMin>Fx && BBox->XMin>Tx || BBox->XMaxXMaxXMin>Fx && BBox->XMin>Tx || BBox->XMaxXMaxXMin>Fx && BBox->XMin>Tx || BBox->XMaxXMaxYMin>Fy && BBox->YMin>Ty || BBox->YMaxYMaxYMin>Fy && BBox->YMin>Ty || BBox->YMaxYMaxYMin>Fy && BBox->YMin>Ty || BBox->YMaxYMaxYMin>Fy && BBox->YMin>Ty || BBox->YMaxYMaxZMin>Fz && BBox->ZMin>Tz || BBox->ZMaxZMaxZMin>Fz && BBox->ZMin>Tz || BBox->ZMaxZMaxZMin>Fz && BBox->ZMin>Tz || BBox->ZMaxZMaxZMin>Fz && BBox->ZMin>Tz || BBox->ZMaxZMaxR && FX+DX>R || FX<-R && FX+DX<-R || ~~~~~^~~~~~~~~~ ~~ RayTrace.c:686:18: note: place parentheses around the '&&' expression to silence this warning FX>R && FX+DX>R || FX<-R && FX+DX<-R || ^ ( ) RayTrace.c:686:38: warning: '&&' within '||' [-Wlogical-op-parentheses] FX>R && FX+DX>R || FX<-R && FX+DX<-R || ~~ ~~~~~~^~~~~~~~~~~ RayTrace.c:686:38: note: place parentheses around the '&&' expression to silence this warning FX>R && FX+DX>R || FX<-R && FX+DX<-R || ^ ( ) RayTrace.c:687:18: warning: '&&' within '||' [-Wlogical-op-parentheses] FY>R && FY+DY>R || FY<-R && FY+DY<-R || ~~~~~^~~~~~~~~~ RayTrace.c:687:18: note: place parentheses around the '&&' expression to silence this warning FY>R && FY+DY>R || FY<-R && FY+DY<-R || ^ ( ) RayTrace.c:687:38: warning: '&&' within '||' [-Wlogical-op-parentheses] FY>R && FY+DY>R || FY<-R && FY+DY<-R || ~~ ~~~~~~^~~~~~~~~~~ RayTrace.c:687:38: note: place parentheses around the '&&' expression to silence this warning FY>R && FY+DY>R || FY<-R && FY+DY<-R || ^ ( ) RayTrace.c:688:18: warning: '&&' within '||' [-Wlogical-op-parentheses] FZ>R && FZ+DZ>R || FZ<-R && FZ+DZ<-R ~~~~~^~~~~~~~~~ RayTrace.c:688:18: note: place parentheses around the '&&' expression to silence this warning FZ>R && FZ+DZ>R || FZ<-R && FZ+DZ<-R ^ ( ) RayTrace.c:688:38: warning: '&&' within '||' [-Wlogical-op-parentheses] FZ>R && FZ+DZ>R || FZ<-R && FZ+DZ<-R ~~ ~~~~~~^~~~~~~~~~~ RayTrace.c:688:38: note: place parentheses around the '&&' expression to silence this warning FZ>R && FZ+DZ>R || FZ<-R && FZ+DZ<-R ^ ( ) RayTrace.c:746:18: warning: '&&' within '||' [-Wlogical-op-parentheses] FX>R && FX+DX>R || FX<-R && FX+DX<-R || ~~~~~^~~~~~~~~~ ~~ RayTrace.c:746:18: note: place parentheses around the '&&' expression to silence this warning FX>R && FX+DX>R || FX<-R && FX+DX<-R || ^ ( ) RayTrace.c:746:38: warning: '&&' within '||' [-Wlogical-op-parentheses] FX>R && FX+DX>R || FX<-R && FX+DX<-R || ~~ ~~~~~~^~~~~~~~~~~ RayTrace.c:746:38: note: place parentheses around the '&&' expression to silence this warning FX>R && FX+DX>R || FX<-R && FX+DX<-R || ^ ( ) RayTrace.c:747:18: warning: '&&' within '||' [-Wlogical-op-parentheses] FY>R && FY+DY>R || FY<-R && FY+DY<-R || ~~~~~^~~~~~~~~~ RayTrace.c:747:18: note: place parentheses around the '&&' expression to silence this warning FY>R && FY+DY>R || FY<-R && FY+DY<-R || ^ ( ) RayTrace.c:747:38: warning: '&&' within '||' [-Wlogical-op-parentheses] FY>R && FY+DY>R || FY<-R && FY+DY<-R || ~~ ~~~~~~^~~~~~~~~~~ RayTrace.c:747:38: note: place parentheses around the '&&' expression to silence this warning FY>R && FY+DY>R || FY<-R && FY+DY<-R || ^ ( ) RayTrace.c:748:20: warning: '&&' within '||' [-Wlogical-op-parentheses] FZ<-CL && FZ+DZ<-CL || FZ>CL && FZ+DZ>CL ~~~~~~~^~~~~~~~~~~~ RayTrace.c:748:20: note: place parentheses around the '&&' expression to silence this warning FZ<-CL && FZ+DZ<-CL || FZ>CL && FZ+DZ>CL ^ ( ) RayTrace.c:748:42: warning: '&&' within '||' [-Wlogical-op-parentheses] FZ<-CL && FZ+DZ<-CL || FZ>CL && FZ+DZ>CL ~~ ~~~~~~^~~~~~~~~~~ RayTrace.c:748:42: note: place parentheses around the '&&' expression to silence this warning FZ<-CL && FZ+DZ<-CL || FZ>CL && FZ+DZ>CL ^ ( ) RayTrace.c:863:26: warning: '&&' within '||' [-Wlogical-op-parentheses] FX>RQd->RMax && FX+DX>RQd->RMax || FX<-RQd->RMax && FX+DX<-RQd->RMax || ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ RayTrace.c:863:26: note: place parentheses around the '&&' expression to silence this warning FX>RQd->RMax && FX+DX>RQd->RMax || FX<-RQd->RMax && FX+DX<-RQd->RMax || ^ ( ) RayTrace.c:863:62: warning: '&&' within '||' [-Wlogical-op-parentheses] FX>RQd->RMax && FX+DX>RQd->RMax || FX<-RQd->RMax && FX+DX<-RQd->RMax || ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ RayTrace.c:863:62: note: place parentheses around the '&&' expression to silence this warning FX>RQd->RMax && FX+DX>RQd->RMax || FX<-RQd->RMax && FX+DX<-RQd->RMax || ^ ( ) RayTrace.c:864:26: warning: '&&' within '||' [-Wlogical-op-parentheses] FY>RQd->RMax && FY+DY>RQd->RMax || FY<-RQd->RMax && FY+DY<-RQd->RMax || ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RayTrace.c:864:26: note: place parentheses around the '&&' expression to silence this warning FY>RQd->RMax && FY+DY>RQd->RMax || FY<-RQd->RMax && FY+DY<-RQd->RMax || ^ ( ) RayTrace.c:864:62: warning: '&&' within '||' [-Wlogical-op-parentheses] FY>RQd->RMax && FY+DY>RQd->RMax || FY<-RQd->RMax && FY+DY<-RQd->RMax || ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ RayTrace.c:864:62: note: place parentheses around the '&&' expression to silence this warning FY>RQd->RMax && FY+DY>RQd->RMax || FY<-RQd->RMax && FY+DY<-RQd->RMax || ^ ( ) RayTrace.c:865:26: warning: '&&' within '||' [-Wlogical-op-parentheses] FZZMin && FZ+DZZMin || FZ> RQd->ZMax && FZ+DZ> RQd->ZMax ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RayTrace.c:865:26: note: place parentheses around the '&&' expression to silence this warning FZZMin && FZ+DZZMin || FZ> RQd->ZMax && FZ+DZ> RQd->ZMax ^ ( ) RayTrace.c:865:62: warning: '&&' within '||' [-Wlogical-op-parentheses] FZZMin && FZ+DZZMin || FZ> RQd->ZMax && FZ+DZ> RQd->ZMax ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ RayTrace.c:865:62: note: place parentheses around the '&&' expression to silence this warning FZZMin && FZ+DZZMin || FZ> RQd->ZMax && FZ+DZ> RQd->ZMax ^ ( ) RayTrace.c:965:26: warning: '&&' within '||' [-Wlogical-op-parentheses] FX>RQd->RMax && FX+DX>RQd->RMax || FX<-RQd->RMax && FX+DX<-RQd->RMax || ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ RayTrace.c:965:26: note: place parentheses around the '&&' expression to silence this warning FX>RQd->RMax && FX+DX>RQd->RMax || FX<-RQd->RMax && FX+DX<-RQd->RMax || ^ ( ) RayTrace.c:965:62: warning: '&&' within '||' [-Wlogical-op-parentheses] FX>RQd->RMax && FX+DX>RQd->RMax || FX<-RQd->RMax && FX+DX<-RQd->RMax || ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ RayTrace.c:965:62: note: place parentheses around the '&&' expression to silence this warning FX>RQd->RMax && FX+DX>RQd->RMax || FX<-RQd->RMax && FX+DX<-RQd->RMax || ^ ( ) RayTrace.c:966:26: warning: '&&' within '||' [-Wlogical-op-parentheses] FY>RQd->RMax && FY+DY>RQd->RMax || FY<-RQd->RMax && FY+DY<-RQd->RMax || ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RayTrace.c:966:26: note: place parentheses around the '&&' expression to silence this warning FY>RQd->RMax && FY+DY>RQd->RMax || FY<-RQd->RMax && FY+DY<-RQd->RMax || ^ ( ) RayTrace.c:966:62: warning: '&&' within '||' [-Wlogical-op-parentheses] FY>RQd->RMax && FY+DY>RQd->RMax || FY<-RQd->RMax && FY+DY<-RQd->RMax || ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ RayTrace.c:966:62: note: place parentheses around the '&&' expression to silence this warning FY>RQd->RMax && FY+DY>RQd->RMax || FY<-RQd->RMax && FY+DY<-RQd->RMax || ^ ( ) RayTrace.c:967:26: warning: '&&' within '||' [-Wlogical-op-parentheses] FZZMin && FZ+DZZMin || FZ> RQd->ZMax && FZ+DZ> RQd->ZMax ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RayTrace.c:967:26: note: place parentheses around the '&&' expression to silence this warning FZZMin && FZ+DZZMin || FZ> RQd->ZMax && FZ+DZ> RQd->ZMax ^ ( ) RayTrace.c:967:62: warning: '&&' within '||' [-Wlogical-op-parentheses] FZZMin && FZ+DZZMin || FZ> RQd->ZMax && FZ+DZ> RQd->ZMax ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ RayTrace.c:967:62: note: place parentheses around the '&&' expression to silence this warning FZZMin && FZ+DZZMin || FZ> RQd->ZMax && FZ+DZ> RQd->ZMax ^ ( ) 30 warnings generated. mv -f .deps/RayTrace.Tpo .deps/RayTrace.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT VectorUtil.o -MD -MP -MF .deps/VectorUtil.Tpo -c -o VectorUtil.o VectorUtil.c mv -f .deps/VectorUtil.Tpo .deps/VectorUtil.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT LUDecomp.o -MD -MP -MF .deps/LUDecomp.Tpo -c -o LUDecomp.o LUDecomp.c mv -f .deps/LUDecomp.Tpo .deps/LUDecomp.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT 2d_4node.o -MD -MP -MF .deps/2d_4node.Tpo -c -o 2d_4node.o 2d_4node.c mv -f .deps/2d_4node.Tpo .deps/2d_4node.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT 16node_quad.o -MD -MP -MF .deps/16node_quad.Tpo -c -o 16node_quad.o 16node_quad.c mv -f .deps/16node_quad.Tpo .deps/16node_quad.Po gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT second.o -MD -MP -MF .deps/second.Tpo -c -o second.o second.c mv -f .deps/second.Tpo .deps/second.Po rm -f libview3d.a ar cru libview3d.a ViewFactors.o TestModel.o LineUtil.o TriangleUtil.o BiLinearUtil.o BiQuadraticUtil.o BiCubicUtil.o RayTrace.o VectorUtil.o LUDecomp.o 2d_4node.o 16node_quad.o second.o ranlib libview3d.a make[4]: Leaving directory '/«PKGBUILDDIR»/fem/src/view3d' Making all in viewaxis make[4]: Entering directory '/«PKGBUILDDIR»/fem/src/viewaxis' g++ -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -fPIC -m64 -fPIC -fPIC -MT viewfact.o -MD -MP -MF .deps/viewfact.Tpo -c -o viewfact.o viewfact.cpp mv -f .deps/viewfact.Tpo .deps/viewfact.Po rm -f libviewaxis.a ar cru libviewaxis.a viewfact.o ranlib libviewaxis.a make[4]: Leaving directory '/«PKGBUILDDIR»/fem/src/viewaxis' Making all in binio make[4]: Entering directory '/«PKGBUILDDIR»/fem/src/binio' Making all in test make[5]: Entering directory '/«PKGBUILDDIR»/fem/src/binio/test' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/«PKGBUILDDIR»/fem/src/binio/test' make[5]: Entering directory '/«PKGBUILDDIR»/fem/src/binio' gcc -DHAVE_CONFIG_H -I. -I../.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT binio.o -MD -MP -MF .deps/binio.Tpo -c -o binio.o binio.c mv -f .deps/binio.Tpo .deps/binio.Po gfortran -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c -o kinds.o kinds.f90 Warning: Nonexistent include directory "binio" gfortran -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c -o biniomod.o biniomod.f90 Warning: Nonexistent include directory "binio" rm -f libbinio.a ar cru libbinio.a binio.o kinds.o biniomod.o ranlib libbinio.a make[5]: Leaving directory '/«PKGBUILDDIR»/fem/src/binio' make[4]: Leaving directory '/«PKGBUILDDIR»/fem/src/binio' make[4]: Entering directory '/«PKGBUILDDIR»/fem/src' gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT SC2Elmer.o -MD -MP -MF .deps/SC2Elmer.Tpo -c -o SC2Elmer.o SC2Elmer.c mv -f .deps/SC2Elmer.Tpo .deps/SC2Elmer.Po gcc -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -L. -L/usr/lib -o SC2Elmer SC2Elmer.o -L. -ldl -L/«PKGBUILDDIR»/debian/tmp/usr/lib -L/usr/lib -lm cp mpif_stub.h mpif /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS NavierStokes.src > NavierStokes.f90 NavierStokes.src:853:20: warning: missing terminating ' character [-Winvalid-pp-token] ! (rho*u',grad(q)) ^ NavierStokes.src:861:23: warning: missing terminating ' character [-Winvalid-pp-token] ! -(rho*u'*grad(u),w) ^ NavierStokes.src:870:22: warning: missing terminating ' character [-Winvalid-pp-token] ! (rho*u',u.grad(w)) ^ NavierStokes.src:880:24: warning: missing terminating ' character [-Winvalid-pp-token] ! (rho*div(u'),div(w)) ^ 4 warnings generated. /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS DefUtils.src > DefUtils.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS PElementMaps.src > PElementMaps.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Types.src > Types.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS iso_varying_string.src > iso_varying_string.f90 iso_varying_string.src:37:33: warning: missing terminating ' character [-Winvalid-pp-token] ! Thanks : Lawrie Schonfelder's iso_varying_string module provided me ^ iso_varying_string.src:1363:14: warning: empty character constant [-Winvalid-pp-token] string = '' ^ iso_varying_string.src:1415:14: warning: empty character constant [-Winvalid-pp-token] string = '' ^ iso_varying_string.src:1490:14: warning: empty character constant [-Winvalid-pp-token] string = '' ^ iso_varying_string.src:1498:40: warning: empty character constant [-Winvalid-pp-token] if(PRESENT(separator)) separator = '' ^ iso_varying_string.src:1571:14: warning: empty character constant [-Winvalid-pp-token] string = '' ^ iso_varying_string.src:1579:40: warning: empty character constant [-Winvalid-pp-token] if(PRESENT(separator)) separator = '' ^ iso_varying_string.src:2348:18: warning: empty character constant [-Winvalid-pp-token] rep_string = '' ^ iso_varying_string.src:2442:43: warning: empty character constant [-Winvalid-pp-token] if(PRESENT(separator)) separator = '' ^ iso_varying_string.src:2443:17: warning: empty character constant [-Winvalid-pp-token] string = '' ^ 10 warnings generated. gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c iso_varying_string.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Messages.src > Messages.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Messages.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Types.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c PElementMaps.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Adaptive.src > Adaptive.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS CRSMatrix.src > CRSMatrix.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS GeneralUtils.src > GeneralUtils.f90 GeneralUtils.src:100:19: warning: empty character constant [-Winvalid-pp-token] CALL Info( '', '.', Level=5, noAdvance=.TRUE. ) ^ GeneralUtils.src:105:21: warning: empty character constant [-Winvalid-pp-token] CALL Info( '', Message, Level=5 ) ^ 2 warnings generated. gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c GeneralUtils.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c CRSMatrix.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS ModelDescription.src > ModelDescription.f90 ModelDescription.src:1020:15: warning: empty character constant [-Winvalid-pp-token] str = '' ^ ModelDescription.src:2403:35: warning: empty character constant [-Winvalid-pp-token] CALL Error( 'LoadRestartFile','' ) ^ ModelDescription.src:2406:35: warning: empty character constant [-Winvalid-pp-token] CALL Error( 'LoadRestartFile','' ) ^ ModelDescription.src:2565:30: warning: missing terminating ' character [-Winvalid-pp-token] ! If TimeCount == 0, we'll get the last time step ^ ModelDescription.src:2595:70: warning: missing terminating ' character [-Winvalid-pp-token] ! If not all varibales were saved for this time step, and we're not ^ ModelDescription.src:3416:41: warning: empty character constant [-Winvalid-pp-token] WRITE( PostFileUnit,'(a)' ) '' ^ ModelDescription.src:3459:38: warning: empty character constant [-Winvalid-pp-token] WRITE( PostFileUnit,'(a)' ) '' ^ 7 warnings generated. /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS MeshUtils.src > MeshUtils.f90 MeshUtils.src:1581:21: warning: empty character constant [-Winvalid-pp-token] WRITE( 1,* ) '' ^ MeshUtils.src:1594:19: warning: empty character constant [-Winvalid-pp-token] WRITE(1,*) '' ^ MeshUtils.src:1614:19: warning: empty character constant [-Winvalid-pp-token] WRITE(1,*) '' ^ MeshUtils.src:5962:43: warning: empty character constant [-Winvalid-pp-token] ! CALL Info('ClusterNodesByDirection','') ^ 4 warnings generated. /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS PElementBase.src > PElementBase.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c PElementBase.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS ParallelUtils.src > ParallelUtils.f90 ParallelUtils.src:79:34: warning: missing terminating ' character [-Winvalid-pp-token] !--------------------------------'----------------------------------------------- ^ 1 warning generated. /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS SParIterSolver.src > SParIterSolver.f90 SParIterSolver.src:1143:32: warning: missing terminating ' character [-Winvalid-pp-token] ! next pe in line needs it's base: ^ 1 warning generated. /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS SParIterGlobals.src > SParIterGlobals.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c SParIterGlobals.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Lists.src > Lists.f90 Lists.src:698:37: warning: missing terminating ' character [-Winvalid-pp-token] ! Extract nodes that we didn't find from our own partition... ^ Lists.src:1953:23: warning: empty character constant [-Winvalid-pp-token] IF ( Namespace /= '' ) THEN ^ 2 warnings generated. /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS CoordinateSystems.src > CoordinateSystems.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c CoordinateSystems.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Interpolation.src > Interpolation.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS ElementDescription.src > ElementDescription.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Integration.src > Integration.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS LinearAlgebra.src > LinearAlgebra.f90 LinearAlgebra.src:42:29: warning: missing terminating ' character [-Winvalid-pp-token] !> matrix eigenvalues (don't use this for anything big, use for example ^ 1 warning generated. gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c LinearAlgebra.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Integration.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c ElementDescription.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Interpolation.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS SParIterComm.src > SParIterComm.f90 SParIterComm.src:666:39: warning: missing terminating ' character [-Winvalid-pp-token] ! in 3D add the rest of the PE's ^ SParIterComm.src:764:53: warning: missing terminating ' character [-Winvalid-pp-token] ! we are not the owner of these nodes. Hence, we'll have to make ^ SParIterComm.src:861:16: warning: missing terminating ' character [-Winvalid-pp-token] ! we don't have these edges, ask to remove us from ^ SParIterComm.src:999:60: warning: missing terminating ' character [-Winvalid-pp-token] ! Check that all edges have global numbers. If we haven't ^ SParIterComm.src:1001:12: warning: missing terminating ' character [-Winvalid-pp-token] ! doesn't have the edge (even if it has the edge nodes!), ^ SParIterComm.src:1021:31: warning: missing terminating ' character [-Winvalid-pp-token] ! if some of the edges don't have global numbers, retry. ^ SParIterComm.src:1302:53: warning: missing terminating ' character [-Winvalid-pp-token] ! we are not the owner of these nodes. Hence, we'll have to make ^ SParIterComm.src:1392:15: warning: missing terminating ' character [-Winvalid-pp-token] ! we don't have these edges, ask to remove us from ^ SParIterComm.src:1440:60: warning: missing terminating ' character [-Winvalid-pp-token] ! Check that all faces have global numbers. If we haven't ^ SParIterComm.src:1442:12: warning: missing terminating ' character [-Winvalid-pp-token] ! doesn't have the face (even if it has the face nodes!), ^ SParIterComm.src:1673:43: warning: missing terminating ' character [-Winvalid-pp-token] ! Test write to a ep-file (please don't delete these lines, they might prove useful... :) ^ SParIterComm.src:1846:54: warning: missing terminating ' character [-Winvalid-pp-token] ! we are not the owner of these nodes. Hence, we'll have to make ^ SParIterComm.src:1964:16: warning: missing terminating ' character [-Winvalid-pp-token] ! they don't, ask them to return a request to be removed from our neighbour list: ^ 13 warnings generated. gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c SParIterComm.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Lists.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS IterSolve.src > IterSolve.f90 IterSolve.src:85:10: warning: missing terminating ' character [-Winvalid-pp-token] !> We don't use the backward error estimate e = ||Ax-b||/(||A|| ||x|| + ||b||) ^ 1 warning generated. /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS BandMatrix.src > BandMatrix.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c BandMatrix.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS IterativeMethods.src > IterativeMethods.f90 IterativeMethods.src:565:22: warning: empty character constant [-Winvalid-pp-token] ! CALL Info( '', Message, Level=4 ) ^ IterativeMethods.src:575:20: warning: empty character constant [-Winvalid-pp-token] ! CALL Info( '', Message, Level=4 ) ^ 2 warnings generated. gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c IterativeMethods.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c IterSolve.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS SParIterPrecond.src > SParIterPrecond.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c SParIterPrecond.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c SParIterSolver.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c ParallelUtils.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS ElementUtils.src > ElementUtils.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS DirectSolve.src > DirectSolve.f90 DirectSolve.src:647:71: warning: missing terminating ' character [-Winvalid-pp-token] A % MumpsID % icntl(4) = 1 ! the same as the two above, but doesn't seem to work. ^ 1 warning generated. gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c DirectSolve.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS BandwidthOptimize.src > BandwidthOptimize.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c BandwidthOptimize.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS ListMatrix.src > ListMatrix.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c ListMatrix.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c ElementUtils.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c MeshUtils.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS HashTable.src > HashTable.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c HashTable.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c ModelDescription.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS SolverUtils.src > SolverUtils.f90 SolverUtils.src:4270:64: warning: missing terminating ' character [-Winvalid-pp-token] ! Negative (impossible) value may be used as indicator that's its the 1st step ^ 1 warning generated. /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Multigrid.src > Multigrid.f90 Multigrid.src:6041:28: warning: empty character constant [-Winvalid-pp-token] CALL ListSetNamespace('') ^ 1 warning generated. /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS ClusteringMethods.src > ClusteringMethods.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c ClusteringMethods.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Smoothers.src > Smoothers.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Smoothers.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Multigrid.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS EigenSolve.src > EigenSolve.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c EigenSolve.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS ParallelEigenSolve.src > ParallelEigenSolve.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c ParallelEigenSolve.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS TimeIntegrate.src > TimeIntegrate.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c TimeIntegrate.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c SolverUtils.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Adaptive.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c DefUtils.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS MaterialModels.src > MaterialModels.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c MaterialModels.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Differentials.src > Differentials.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Differentials.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c NavierStokes.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS NavierStokesGeneral.src > NavierStokesGeneral.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c NavierStokesGeneral.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS NavierStokesCylindrical.src > NavierStokesCylindrical.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c NavierStokesCylindrical.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS DiffuseConvectiveAnisotropic.src > DiffuseConvectiveAnisotropic.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c DiffuseConvectiveAnisotropic.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS DiffuseConvectiveGeneralAnisotropic.src > DiffuseConvectiveGeneralAnisotropic.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c DiffuseConvectiveGeneralAnisotropic.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Stress.src > Stress.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Stress.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS StressGeneral.src > StressGeneral.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c StressGeneral.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS FlowSolve.src > FlowSolve.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS FreeSurface.src > FreeSurface.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c FreeSurface.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c FlowSolve.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS HeatSolve.src > HeatSolve.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS Radiation.src > Radiation.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c Radiation.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c HeatSolve.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS StressSolve.src > StressSolve.f90 StressSolve.src:306:65: warning: missing terminating ' character [-Winvalid-pp-token] IF(CalcPrincipalAngle) CalcPrincipalAll = .TRUE. ! can't calculate angle without principal ^ StressSolve.src:307:62: warning: missing terminating ' character [-Winvalid-pp-token] IF(CalcPrincipalAll) CalcStressAll = .TRUE. ! can't calculate principal without components ^ StressSolve.src:308:62: warning: missing terminating ' character [-Winvalid-pp-token] IF(CalculateStrains) CalcStressAll = .TRUE. ! can't calculate principal without components ^ 3 warnings generated. gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c StressSolve.f90 /lib/cpp -I/«PKGBUILDDIR»/debian/tmp/usr/include -DCONTIG=",CONTIGUOUS" -P -traditional-cpp -I. -I/usr/include -DFULL_INDUCTION -DUSE_ARPACK -I/usr/include/mpi -DHAVE_MUMPS SolveBand.src > SolveBand.f90 gfortran -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I. -Ibinio -I/usr/include/mpi -I/usr/include -c SolveBand.f90 gcc -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR»/debian/tmp/usr/include -I/usr/include/freetype2 -I/usr/include/mpi -I/«PKGBUILDDIR»/debian/tmp/usr/include -fPIC -m64 -fPIC -fPIC -I/usr/include -I/usr/include/mpi -MT fft.o -MD -MP -MF .deps/fft.Tpo -c -o fft.o fft.c fft.c:368:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] BitReverseArray( N, T ) ^ fft.c:393:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ fft.c:438:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] sort( N, Key, Ord ) ^ fft.c:457:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ fft.c:465:8: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] static FFTInit( ) ~~~~~~ ^ fft.c:473:9: error: non-void function 'FFTInit' should return a value [-Wreturn-type] return; ^ fft.c:500:8: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] static FFTKernel( N, F, T ) ~~~~~~ ^ fft.c:558:9: error: non-void function 'FFTKernel' should return a value [-Wreturn-type] return; ^ fft.c:686:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] rfftf( N, T, F ) ^ fft.c:766:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] rfftb( N, F, T ) ^ fft.c:856:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] FC_FUNC(frfftb,FRFFTB)( N, F, T ) ^ ./../config.h:63:28: note: expanded from macro 'FC_FUNC' #define FC_FUNC(name,NAME) name ## _ ^ :69:1: note: expanded from here frfftb_ ^ fft.c:886:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] gfftb( nF, freq, nT, time ) ^ fft.c:939:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] gfftf( nT, time, nF, freq ) ^ fft.c:995:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] cfftf2D( M, N, T, F ) ^ fft.c:1033:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] cfftb2D( M, N, F, T ) ^ fft.c:1065:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] cfftf3D( L, M, N, T, F ) ^ fft.c:1103:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] cfftb3D( L, M, N, F, T ) ^ fft.c:1132:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] cfftfND( N, D, T, F ) ^ fft.c:1209:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] cfftbND( N, D, F, T ) ^ 17 warnings and 2 errors generated. make[4]: *** [fft.o] Error 1 Makefile:807: recipe for target 'fft.o' failed make[4]: Leaving directory '/«PKGBUILDDIR»/fem/src' make[3]: *** [all-recursive] Error 1 Makefile:827: recipe for target 'all-recursive' failed make[3]: Leaving directory '/«PKGBUILDDIR»/fem/src' make[2]: *** [all-recursive] Error 1 Makefile:453: recipe for target 'all-recursive' failed make[2]: Leaving directory '/«PKGBUILDDIR»/fem' make[1]: *** [all] Error 2 Makefile:391: recipe for target 'all' failed make[1]: Leaving directory '/«PKGBUILDDIR»/fem' make: *** [stamp-build] Error 2 debian/rules:89: recipe for target 'stamp-build' failed dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 ──────────────────────────────────────────────────────────────────────────────── Build finished at 20150326-0404 Finished ──────── E: Build failure (dpkg-buildpackage died) ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /«BUILDDIR» Not cleaning session: cloned chroot in use ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Build Architecture: amd64 Build-Space: 131616 Build-Time: 141 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 37 Job: elmerfem_6.1.0.svn.5396.dfsg2-4 Machine Architecture: amd64 Package: elmerfem Package-Time: 209 Source-Version: 6.1.0.svn.5396.dfsg2-4 Space: 131616 Status: attempted Version: 6.1.0.svn.5396.dfsg2-4 ──────────────────────────────────────────────────────────────────────────────── Finished at 20150326-0404 Build needed 00:03:29, 131616k disc space DC-Status: Failed 210.582734821s DC-Time-Estimation: 210.582734821 versus expected 1362 (r/m: 5.467766700616412 ; m: 210.582734821)