DC-Build-Header: meep-openmpi 1.2.1-2 / 2015-03-26 05:16:56 +0000 DC-Task: source:meep-openmpi version:1.2.1-2 architecture:any chroot:unstable esttime:890 logfile:/tmp/meep-openmpi_1.2.1-2_unstable_clang.log modes:binary-only:parallel:clang DC-Sbuild-call: su user -c 'sbuild -n --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang meep-openmpi_1.2.1-2' sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on ip-172-31-13-50.us-west-2.compute.internal ╔══════════════════════════════════════════════════════════════════════════════╗ ║ meep-openmpi 1.2.1-2 (amd64) 26 Mar 2015 05:16 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: meep-openmpi Version: 1.2.1-2 Source Version: 1.2.1-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/meep-openmpi-D4yJS4/meep-openmpi-1.2.1' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/meep-openmpi-D4yJS4' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/unstable-amd64-sbuild-5d29da8f-cd56-422e-b994-71568c55a4f2' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Get:1 http://localhost:9999 unstable InRelease [257 kB] Get:2 http://localhost:9999 unstable/main Sources/DiffIndex [7876 B] Get:3 http://localhost:9999 unstable/main amd64 Packages/DiffIndex [7876 B] Get:4 http://localhost:9999 unstable/main Translation-en/DiffIndex [7876 B] Get:5 http://localhost:9999 unstable/main 2015-03-25-1448.37.pdiff [3021 B] Get:6 http://localhost:9999 unstable/main 2015-03-25-2049.47.pdiff [5545 B] Get:7 http://localhost:9999 unstable/main 2015-03-26-0248.39.pdiff [3389 B] Get:8 http://localhost:9999 unstable/main 2015-03-26-0248.39.pdiff [3389 B] Get:9 http://localhost:9999 unstable/main amd64 2015-03-25-1448.37.pdiff [4095 B] Get:10 http://localhost:9999 unstable/main amd64 2015-03-25-2049.47.pdiff [4595 B] Get:11 http://localhost:9999 unstable/main amd64 2015-03-26-0248.39.pdiff [3173 B] Get:12 http://localhost:9999 unstable/main 2015-03-25-2049.47.pdiff [2032 B] Get:13 http://localhost:9999 unstable/main amd64 2015-03-26-0248.39.pdiff [3173 B] Get:14 http://localhost:9999 unstable/main 2015-03-25-2049.47.pdiff [2032 B] Fetched 306 kB in 4s (63.5 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... Need to get 740 kB of source archives. Get:1 http://localhost:9999/debian/ unstable/main meep-openmpi 1.2.1-2 (dsc) [1463 B] Get:2 http://localhost:9999/debian/ unstable/main meep-openmpi 1.2.1-2 (tar) [731 kB] Get:3 http://localhost:9999/debian/ unstable/main meep-openmpi 1.2.1-2 (diff) [6972 B] Fetched 740 kB in 0s (3195 kB/s) Download complete and in download only mode Check arch ────────── ┌──────────────────────────────────────────────────────────────────────────────┐ │ Chroot Setup Commands │ └──────────────────────────────────────────────────────────────────────────────┘ /tmp/clang ────────── + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=3.6 + echo 'Install of clang-3.6' Install of clang-3.6 + apt-get update Hit http://localhost:9999 unstable InRelease Get:1 http://localhost:9999 unstable/main Sources/DiffIndex [7876 B] Get:2 http://localhost:9999 unstable/main amd64 Packages/DiffIndex [7876 B] Get:3 http://localhost:9999 unstable/main Translation-en/DiffIndex [7876 B] Fetched 23.6 kB in 1s (12.7 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-3.6 Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: libbsd0 libclang-common-3.6-dev libclang1-3.6 libedit2 libffi6 libllvm3.6 libobjc-4.9-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-3.6-doc Recommended packages: llvm-3.6-dev python The following NEW packages will be installed: clang-3.6 libbsd0 libclang-common-3.6-dev libclang1-3.6 libedit2 libffi6 libllvm3.6 libobjc-4.9-dev libobjc4 0 upgraded, 9 newly installed, 0 to remove and 0 not upgraded. Need to get 39.2 MB of archives. After this operation, 153 MB of additional disk space will be used. Get:1 http://localhost:9999/debian/ unstable/main libbsd0 amd64 0.7.0-2 [67.9 kB] Get:2 http://localhost:9999/debian/ unstable/main libedit2 amd64 3.1-20140620-2 [85.1 kB] Get:3 http://localhost:9999/debian/ unstable/main libffi6 amd64 3.1-2+b2 [20.1 kB] Get:4 http://localhost:9999/debian/ unstable/main libllvm3.6 amd64 1:3.6-2 [8137 kB] Get:5 http://localhost:9999/debian/ unstable/main libobjc4 amd64 4.9.2-10 [112 kB] Get:6 http://localhost:9999/debian/ unstable/main libobjc-4.9-dev amd64 4.9.2-10 [372 kB] Get:7 http://localhost:9999/debian/ unstable/main libclang1-3.6 amd64 1:3.6-2 [3839 kB] Get:8 http://localhost:9999/debian/ unstable/main libclang-common-3.6-dev amd64 1:3.6-2 [706 kB] Get:9 http://localhost:9999/debian/ unstable/main clang-3.6 amd64 1:3.6-2 [25.8 MB] debconf: unable to initialize frontend: Dialog debconf: (Dialog frontend will not work on a dumb terminal, an emacs shell buffer, or without a controlling terminal.) debconf: falling back to frontend: Readline debconf: unable to initialize frontend: Readline debconf: (This frontend requires a controlling tty.) debconf: falling back to frontend: Teletype dpkg-preconfigure: unable to re-open stdin: Fetched 39.2 MB in 1s (38.6 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11980 files and directories currently installed.) Preparing to unpack .../libbsd0_0.7.0-2_amd64.deb ... Unpacking libbsd0:amd64 (0.7.0-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../libedit2_3.1-20140620-2_amd64.deb ... Unpacking libedit2:amd64 (3.1-20140620-2) ... Selecting previously unselected package libffi6:amd64. Preparing to unpack .../libffi6_3.1-2+b2_amd64.deb ... Unpacking libffi6:amd64 (3.1-2+b2) ... Selecting previously unselected package libllvm3.6:amd64. Preparing to unpack .../libllvm3.6_1%3a3.6-2_amd64.deb ... Unpacking libllvm3.6:amd64 (1:3.6-2) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../libobjc4_4.9.2-10_amd64.deb ... Unpacking libobjc4:amd64 (4.9.2-10) ... Selecting previously unselected package libobjc-4.9-dev:amd64. Preparing to unpack .../libobjc-4.9-dev_4.9.2-10_amd64.deb ... Unpacking libobjc-4.9-dev:amd64 (4.9.2-10) ... Selecting previously unselected package libclang1-3.6:amd64. Preparing to unpack .../libclang1-3.6_1%3a3.6-2_amd64.deb ... Unpacking libclang1-3.6:amd64 (1:3.6-2) ... Selecting previously unselected package libclang-common-3.6-dev. Preparing to unpack .../libclang-common-3.6-dev_1%3a3.6-2_amd64.deb ... Unpacking libclang-common-3.6-dev (1:3.6-2) ... Selecting previously unselected package clang-3.6. Preparing to unpack .../clang-3.6_1%3a3.6-2_amd64.deb ... Unpacking clang-3.6 (1:3.6-2) ... Setting up libbsd0:amd64 (0.7.0-2) ... Setting up libedit2:amd64 (3.1-20140620-2) ... Setting up libffi6:amd64 (3.1-2+b2) ... Setting up libllvm3.6:amd64 (1:3.6-2) ... Setting up libobjc4:amd64 (4.9.2-10) ... Setting up libobjc-4.9-dev:amd64 (4.9.2-10) ... Setting up libclang1-3.6:amd64 (1:3.6-2) ... Setting up libclang-common-3.6-dev (1:3.6-2) ... Setting up clang-3.6 (1:3.6-2) ... Processing triggers for libc-bin (2.19-17) ... + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5' + cd /usr/bin + for VERSION in '$VERSIONS' + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-3.6 g++-4.6 + ln -s clang-3.6 gcc-4.6 + ln -s clang-3.6 cpp-4.6 + ln -s clang-3.6 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections + echo 'g++-4.6 hold' + dpkg --set-selections + for VERSION in '$VERSIONS' + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-3.6 g++-4.7 + ln -s clang-3.6 gcc-4.7 + ln -s clang-3.6 cpp-4.7 + ln -s clang-3.6 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections + echo 'g++-4.7 hold' + dpkg --set-selections + for VERSION in '$VERSIONS' + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-3.6 g++-4.8 + ln -s clang-3.6 gcc-4.8 + ln -s clang-3.6 cpp-4.8 + ln -s clang-3.6 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-3.6 g++-4.9 + ln -s clang-3.6 gcc-4.9 + ln -s clang-3.6 cpp-4.9 + ln -s clang-3.6 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections + echo 'g++-4.9 hold' + dpkg --set-selections + for VERSION in '$VERSIONS' + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-3.6 g++-5 + ln -s clang-3.6 gcc-5 + ln -s clang-3.6 cpp-5 + ln -s clang-3.6 gcc + echo 'gcc-5 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-5 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + cd - /«BUILDDIR» + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang'. Finished processing commands. ──────────────────────────────────────────────────────────────────────────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-zlsvZ6/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/816 B of archives. After this operation, 0 B of additional disk space will be used. Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12200 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, init, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), gfortran, debhelper (>= 9), autotools-dev, dh-autoreconf, libctl-dev (>= 3.2.2-2), pkg-config, libharminv-dev (>= 1.1), zlib1g-dev, libfftw3-dev, libhdf5-openmpi-dev, libgsl0-dev, liblapack-dev, libopenmpi-dev, libatlas-base-dev, chrpath Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, init, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), gfortran, debhelper (>= 9), autotools-dev, dh-autoreconf, libctl-dev (>= 3.2.2-2), pkg-config, libharminv-dev (>= 1.1), zlib1g-dev, libfftw3-dev, libhdf5-openmpi-dev, libgsl0-dev, liblapack-dev, libopenmpi-dev, libatlas-base-dev, chrpath dpkg-deb: building package `sbuild-build-depends-meep-openmpi-dummy' in `/«BUILDDIR»/resolver-4RlHZM/apt_archive/sbuild-build-depends-meep-openmpi-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install meep-openmpi build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils chrpath debhelper dh-autoreconf file gettext gettext-base gfortran gfortran-4.9 groff-base guile-2.0 guile-2.0-dev guile-2.0-libs intltool-debian libasprintf0c2 libatlas-base-dev libatlas-dev libatlas3-base libblas-common libblas-dev libblas3 libcr0 libcroco3 libctl-dev libctl5 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libgc-dev libgfortran-4.9-dev libgfortran3 libglib2.0-0 libgmp-dev libgmpxx4ldbl libgsl0-dev libgsl0ldbl libharminv-dev libharminv2 libhdf5-openmpi-8 libhdf5-openmpi-dev libhwloc-dev libhwloc5 libibverbs-dev libibverbs1 libicu52 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev liblapack-dev liblapack3 libltdl-dev libltdl7 libmagic1 libncurses5-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi1.6 libpipeline1 libreadline6-dev libsigsegv2 libtinfo-dev libtool libunistring0 libxml2 m4 man-db openmpi-common pkg-config po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican wordlist whois vacation dh-make gettext-doc gfortran-multilib gfortran-doc gfortran-4.9-multilib gfortran-4.9-doc libgfortran3-dbg groff guile-2.0-doc libblas-doc liblapack-doc blcr-dkms libfftw3-doc libgmp10-doc libmpfr-dev gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html libhdf5-doc libhwloc-contrib-plugins libtool-doc ncurses-doc readline-doc automaken gcj-jdk www-browser libmail-box-perl Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libctl-doc libglib2.0-data shared-mime-info xdg-user-dirs libhwloc-plugins xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils chrpath debhelper dh-autoreconf file gettext gettext-base gfortran gfortran-4.9 groff-base guile-2.0 guile-2.0-dev guile-2.0-libs intltool-debian libasprintf0c2 libatlas-base-dev libatlas-dev libatlas3-base libblas-common libblas-dev libblas3 libcr0 libcroco3 libctl-dev libctl5 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libgc-dev libgfortran-4.9-dev libgfortran3 libglib2.0-0 libgmp-dev libgmpxx4ldbl libgsl0-dev libgsl0ldbl libharminv-dev libharminv2 libhdf5-openmpi-8 libhdf5-openmpi-dev libhwloc-dev libhwloc5 libibverbs-dev libibverbs1 libicu52 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev liblapack-dev liblapack3 libltdl-dev libltdl7 libmagic1 libncurses5-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi1.6 libpipeline1 libreadline6-dev libsigsegv2 libtinfo-dev libtool libunistring0 libxml2 m4 man-db openmpi-common pkg-config po-debconf sbuild-build-depends-meep-openmpi-dummy zlib1g-dev 0 upgraded, 79 newly installed, 0 to remove and 0 not upgraded. Need to get 53.4 MB/53.4 MB of archives. After this operation, 240 MB of additional disk space will be used. Get:1 http://localhost:9999/debian/ unstable/main libpipeline1 amd64 1.4.0-1 [27.9 kB] Get:2 http://localhost:9999/debian/ unstable/main groff-base amd64 1.22.3-1 [1205 kB] Get:3 http://localhost:9999/debian/ unstable/main bsdmainutils amd64 9.0.6 [183 kB] Get:4 http://localhost:9999/debian/ unstable/main man-db amd64 2.7.0.2-5 [1000 kB] Get:5 http://localhost:9999/debian/ unstable/main libasprintf0c2 amd64 0.19.3-2 [31.3 kB] Get:6 http://localhost:9999/debian/ unstable/main libmagic1 amd64 1:5.22+15-2 [249 kB] Get:7 http://localhost:9999/debian/ unstable/main libicu52 amd64 52.1-8 [6780 kB] Get:8 http://localhost:9999/debian/ unstable/main libxml2 amd64 2.9.2+dfsg1-3 [934 kB] Get:9 http://localhost:9999/debian/ unstable/main libltdl7 amd64 2.4.2-1.11 [45.2 kB] Get:10 http://localhost:9999/debian/ unstable/main libunistring0 amd64 0.9.3-5.2+b1 [288 kB] Get:11 http://localhost:9999/debian/ unstable/main guile-2.0-libs amd64 2.0.11+1-9 [2219 kB] Get:12 http://localhost:9999/debian/ unstable/main libglib2.0-0 amd64 2.42.1-1 [2401 kB] Get:13 http://localhost:9999/debian/ unstable/main libcroco3 amd64 0.6.8-3+b1 [135 kB] Get:14 http://localhost:9999/debian/ unstable/main libctl5 amd64 3.2.2-2 [99.7 kB] Get:15 http://localhost:9999/debian/ unstable/main libfftw3-double3 amd64 3.3.4-2 [722 kB] Get:16 http://localhost:9999/debian/ unstable/main libfftw3-long3 amd64 3.3.4-2 [312 kB] Get:17 http://localhost:9999/debian/ unstable/main libfftw3-quad3 amd64 3.3.4-2 [556 kB] Get:18 http://localhost:9999/debian/ unstable/main libfftw3-single3 amd64 3.3.4-2 [754 kB] Get:19 http://localhost:9999/debian/ unstable/main libgfortran3 amd64 4.9.2-10 [255 kB] Get:20 http://localhost:9999/debian/ unstable/main libgmpxx4ldbl amd64 2:6.0.0+dfsg-6 [22.1 kB] Get:21 http://localhost:9999/debian/ unstable/main libnuma1 amd64 2.0.10-1 [32.5 kB] Get:22 http://localhost:9999/debian/ unstable/main libsigsegv2 amd64 2.10-4+b1 [29.2 kB] Get:23 http://localhost:9999/debian/ unstable/main libhwloc5 amd64 1.10.0-3 [86.9 kB] Get:24 http://localhost:9999/debian/ unstable/main libcr0 amd64 0.8.5-2.2 [32.7 kB] Get:25 http://localhost:9999/debian/ unstable/main libibverbs1 amd64 1.1.8-1 [32.0 kB] Get:26 http://localhost:9999/debian/ unstable/main libopenmpi1.6 amd64 1.6.5-9.2 [1457 kB] Get:27 http://localhost:9999/debian/ unstable/main libhdf5-openmpi-8 amd64 1.8.13+docs-15 [1084 kB] Get:28 http://localhost:9999/debian/ unstable/main file amd64 1:5.22+15-2 [60.1 kB] Get:29 http://localhost:9999/debian/ unstable/main gettext-base amd64 0.19.3-2 [121 kB] Get:30 http://localhost:9999/debian/ unstable/main m4 amd64 1.4.17-4 [254 kB] Get:31 http://localhost:9999/debian/ unstable/main autoconf all 2.69-8 [340 kB] Get:32 http://localhost:9999/debian/ unstable/main autotools-dev all 20140911.1 [70.5 kB] Get:33 http://localhost:9999/debian/ unstable/main automake all 1:1.14.1-4 [725 kB] Get:34 http://localhost:9999/debian/ unstable/main autopoint all 0.19.3-2 [413 kB] Get:35 http://localhost:9999/debian/ unstable/main chrpath amd64 0.16-1 [16.3 kB] Get:36 http://localhost:9999/debian/ unstable/main gettext amd64 0.19.3-2 [1240 kB] Get:37 http://localhost:9999/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB] Get:38 http://localhost:9999/debian/ unstable/main po-debconf all 1.0.16+nmu3 [220 kB] Get:39 http://localhost:9999/debian/ unstable/main debhelper all 9.20150101 [813 kB] Get:40 http://localhost:9999/debian/ unstable/main libtool all 2.4.2-1.11 [190 kB] Get:41 http://localhost:9999/debian/ unstable/main dh-autoreconf all 10 [15.2 kB] Get:42 http://localhost:9999/debian/ unstable/main libgfortran-4.9-dev amd64 4.9.2-10 [281 kB] Get:43 http://localhost:9999/debian/ unstable/main gfortran-4.9 amd64 4.9.2-10 [5465 kB] Get:44 http://localhost:9999/debian/ unstable/main gfortran amd64 4:4.9.2-2 [1292 B] Get:45 http://localhost:9999/debian/ unstable/main guile-2.0 amd64 2.0.11+1-9 [18.5 kB] Get:46 http://localhost:9999/debian/ unstable/main libtinfo-dev amd64 5.9+20140913-1+b1 [77.1 kB] Get:47 http://localhost:9999/debian/ unstable/main libncurses5-dev amd64 5.9+20140913-1+b1 [175 kB] Get:48 http://localhost:9999/debian/ unstable/main libreadline6-dev amd64 6.3-8+b3 [124 kB] Get:49 http://localhost:9999/debian/ unstable/main libltdl-dev amd64 2.4.2-1.11 [157 kB] Get:50 http://localhost:9999/debian/ unstable/main libgmp-dev amd64 2:6.0.0+dfsg-6 [621 kB] Get:51 http://localhost:9999/debian/ unstable/main libgc-dev amd64 1:7.2d-6.4 [225 kB] Get:52 http://localhost:9999/debian/ unstable/main pkg-config amd64 0.28-1 [57.5 kB] Get:53 http://localhost:9999/debian/ unstable/main guile-2.0-dev amd64 2.0.11+1-9 [693 kB] Get:54 http://localhost:9999/debian/ unstable/main libblas-common amd64 1.2.20110419-10 [8496 B] Get:55 http://localhost:9999/debian/ unstable/main libatlas3-base amd64 3.10.2-7 [2725 kB] Get:56 http://localhost:9999/debian/ unstable/main libblas3 amd64 1.2.20110419-10 [167 kB] Get:57 http://localhost:9999/debian/ unstable/main libblas-dev amd64 1.2.20110419-10 [163 kB] Get:58 http://localhost:9999/debian/ unstable/main libatlas-dev all 3.10.2-7 [68.8 kB] Get:59 http://localhost:9999/debian/ unstable/main libatlas-base-dev amd64 3.10.2-7 [3457 kB] Get:60 http://localhost:9999/debian/ unstable/main libctl-dev amd64 3.2.2-2 [89.1 kB] Get:61 http://localhost:9999/debian/ unstable/main libfftw3-bin amd64 3.3.4-2 [48.6 kB] Get:62 http://localhost:9999/debian/ unstable/main libfftw3-dev amd64 3.3.4-2 [2180 kB] Get:63 http://localhost:9999/debian/ unstable/main libgsl0ldbl amd64 1.16+dfsg-2 [819 kB] Get:64 http://localhost:9999/debian/ unstable/main libgsl0-dev amd64 1.16+dfsg-2 [908 kB] Get:65 http://localhost:9999/debian/ unstable/main liblapack3 amd64 3.5.0-4 [1852 kB] Get:66 http://localhost:9999/debian/ unstable/main libharminv2 amd64 1.3.1-10 [16.4 kB] Get:67 http://localhost:9999/debian/ unstable/main libharminv-dev amd64 1.3.1-10 [7020 B] Get:68 http://localhost:9999/debian/ unstable/main libjpeg62-turbo amd64 1:1.3.1-12 [116 kB] Get:69 http://localhost:9999/debian/ unstable/main libjpeg62-turbo-dev amd64 1:1.3.1-12 [455 kB] Get:70 http://localhost:9999/debian/ unstable/main libjpeg-dev all 1:1.3.1-12 [49.3 kB] Get:71 http://localhost:9999/debian/ unstable/main liblapack-dev amd64 3.5.0-4 [1884 kB] Get:72 http://localhost:9999/debian/ unstable/main zlib1g-dev amd64 1:1.2.8.dfsg-2+b1 [206 kB] Get:73 http://localhost:9999/debian/ unstable/main openmpi-common all 1.6.5-9.2 [110 kB] Get:74 http://localhost:9999/debian/ unstable/main libibverbs-dev amd64 1.1.8-1 [85.4 kB] Get:75 http://localhost:9999/debian/ unstable/main libnuma-dev amd64 2.0.10-1 [45.3 kB] Get:76 http://localhost:9999/debian/ unstable/main libhwloc-dev amd64 1.10.0-3 [142 kB] Get:77 http://localhost:9999/debian/ unstable/main libopenmpi-dev amd64 1.6.5-9.2 [450 kB] Get:78 http://localhost:9999/debian/ unstable/main libhdf5-openmpi-dev amd64 1.8.13+docs-15 [3935 kB] Extracting templates from packages: 37% Extracting templates from packages: 75% Extracting templates from packages: 100% Preconfiguring packages ... 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Setting up file (1:5.22+15-2) ... Setting up gettext-base (0.19.3-2) ... Setting up m4 (1.4.17-4) ... Setting up autoconf (2.69-8) ... Setting up autotools-dev (20140911.1) ... Setting up automake (1:1.14.1-4) ... update-alternatives: using /usr/bin/automake-1.14 to provide /usr/bin/automake (automake) in auto mode Setting up autopoint (0.19.3-2) ... Setting up chrpath (0.16-1) ... Setting up gettext (0.19.3-2) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu3) ... Setting up debhelper (9.20150101) ... Setting up libtool (2.4.2-1.11) ... Setting up dh-autoreconf (10) ... Setting up libgfortran-4.9-dev:amd64 (4.9.2-10) ... Setting up gfortran-4.9 (4.9.2-10) ... Setting up gfortran (4:4.9.2-2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up guile-2.0 (2.0.11+1-9) ... update-alternatives: using /usr/bin/guile-2.0 to provide /usr/bin/guile (guile) in auto mode Setting up libtinfo-dev:amd64 (5.9+20140913-1+b1) ... Setting up libncurses5-dev:amd64 (5.9+20140913-1+b1) ... Setting up libreadline6-dev:amd64 (6.3-8+b3) ... Setting up libltdl-dev:amd64 (2.4.2-1.11) ... Setting up libgmp-dev:amd64 (2:6.0.0+dfsg-6) ... Setting up libgc-dev:amd64 (1:7.2d-6.4) ... Setting up pkg-config (0.28-1) ... Setting up guile-2.0-dev (2.0.11+1-9) ... Setting up libblas-common (1.2.20110419-10) ... Setting up libatlas3-base (3.10.2-7) ... update-alternatives: using /usr/lib/atlas-base/atlas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode update-alternatives: using /usr/lib/atlas-base/atlas/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libblas3 (1.2.20110419-10) ... Setting up libblas-dev (1.2.20110419-10) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libatlas-dev (3.10.2-7) ... Setting up libatlas-base-dev (3.10.2-7) ... update-alternatives: using /usr/lib/atlas-base/atlas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode update-alternatives: using /usr/lib/atlas-base/atlas/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libctl-dev (3.2.2-2) ... Setting up libfftw3-bin (3.3.4-2) ... Setting up libfftw3-dev:amd64 (3.3.4-2) ... Setting up libgsl0ldbl (1.16+dfsg-2) ... Setting up libgsl0-dev (1.16+dfsg-2) ... Setting up liblapack3 (3.5.0-4) ... Setting up libharminv2 (1.3.1-10) ... Setting up libharminv-dev (1.3.1-10) ... Setting up libjpeg62-turbo:amd64 (1:1.3.1-12) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.3.1-12) ... Setting up libjpeg-dev (1:1.3.1-12) ... Setting up liblapack-dev (3.5.0-4) ... Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-2+b1) ... Setting up openmpi-common (1.6.5-9.2) ... Setting up libibverbs-dev (1.1.8-1) ... Setting up libnuma-dev:amd64 (2.0.10-1) ... Setting up libhwloc-dev:amd64 (1.10.0-3) ... Setting up libopenmpi-dev (1.6.5-9.2) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up libhdf5-openmpi-dev (1.8.13+docs-15) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up sbuild-build-depends-meep-openmpi-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.19-17) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 3.2.0-4-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.25-5 dpkg-dev_1.17.24 g++-4.9_4.9.2-10 gcc-4.9_4.9.2-10 libc6-dev_2.19-17 libstdc++-4.9-dev_4.9.2-10 libstdc++6_4.9.2-10 linux-libc-dev_3.16.7-ckt7-1 Package versions: acl_2.2.52-2 adduser_3.113+nmu3 apt_1.0.9.7 apt-utils_1.0.9.7 autoconf_2.69-8 automake_1:1.14.1-4 autopoint_0.19.3-2 autotools-dev_20140911.1 base-files_8 base-passwd_3.5.37 bash_4.3-12 binutils_2.25-5 bsdmainutils_9.0.6 bsdutils_1:2.25.2-5 build-essential_11.7 bzip2_1.0.6-7+b2 chrpath_0.16-1 clang-3.6_1:3.6-2 coreutils_8.23-4 cpp_4:4.9.2-2 cpp-4.9_4.9.2-10 dash_0.5.7-4+b1 debconf_1.5.56 debfoster_2.7-2 debhelper_9.20150101 debian-archive-keyring_2014.3 debianutils_4.4+b1 dh-autoreconf_10 diffutils_1:3.3-1+b1 dmsetup_2:1.02.90-2.1 dpkg_1.17.24 dpkg-dev_1.17.24 e2fslibs_1.42.12-1.1 e2fsprogs_1.42.12-1.1 fakeroot_1.20.2-1 file_1:5.22+15-2 findutils_4.4.2-9+b1 g++_4:4.9.2-2 g++-4.9_4.9.2-10 gcc_4:4.9.2-2 gcc-4.9_4.9.2-10 gcc-4.9-base_4.9.2-10 gettext_0.19.3-2 gettext-base_0.19.3-2 gfortran_4:4.9.2-2 gfortran-4.9_4.9.2-10 gnupg_1.4.18-7 gpgv_1.4.18-7 grep_2.20-4.1 groff-base_1.22.3-1 guile-2.0_2.0.11+1-9 guile-2.0-dev_2.0.11+1-9 guile-2.0-libs_2.0.11+1-9 gzip_1.6-4 hostname_3.15 init_1.22 initscripts_2.88dsf-58 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 less_458-3 libacl1_2.2.52-2 libapt-inst1.5_1.0.9.7 libapt-pkg4.12_1.0.9.7 libasan1_4.9.2-10 libasprintf0c2_0.19.3-2 libatlas-base-dev_3.10.2-7 libatlas-dev_3.10.2-7 libatlas3-base_3.10.2-7 libatomic1_4.9.2-10 libattr1_1:2.4.47-2 libaudit-common_1:2.4-1 libaudit1_1:2.4-1+b1 libblas-common_1.2.20110419-10 libblas-dev_1.2.20110419-10 libblas3_1.2.20110419-10 libblkid1_2.25.2-5 libbsd0_0.7.0-2 libbz2-1.0_1.0.6-7+b2 libc-bin_2.19-17 libc-dev-bin_2.19-17 libc6_2.19-17 libc6-dev_2.19-17 libcap2_1:2.24-7 libcap2-bin_1:2.24-7 libcilkrts5_4.9.2-10 libclang-common-3.6-dev_1:3.6-2 libclang1-3.6_1:3.6-2 libcloog-isl4_0.18.2-1+b2 libcomerr2_1.42.12-1.1 libcr0_0.8.5-2.2 libcroco3_0.6.8-3+b1 libcryptsetup4_2:1.6.6-5 libctl-dev_3.2.2-2 libctl5_3.2.2-2 libdb5.3_5.3.28-9 libdebconfclient0_0.192 libdevmapper1.02.1_2:1.02.90-2.1 libdpkg-perl_1.17.24 libedit2_3.1-20140620-2 libfakeroot_1.20.2-1 libffi6_3.1-2+b2 libfftw3-bin_3.3.4-2 libfftw3-dev_3.3.4-2 libfftw3-double3_3.3.4-2 libfftw3-long3_3.3.4-2 libfftw3-quad3_3.3.4-2 libfftw3-single3_3.3.4-2 libgc-dev_1:7.2d-6.4 libgc1c2_1:7.2d-6.4 libgcc-4.9-dev_4.9.2-10 libgcc1_1:4.9.2-10 libgcrypt20_1.6.3-2 libgdbm3_1.8.3-13.1 libgfortran-4.9-dev_4.9.2-10 libgfortran3_4.9.2-10 libglib2.0-0_2.42.1-1 libgmp-dev_2:6.0.0+dfsg-6 libgmp10_2:6.0.0+dfsg-6 libgmpxx4ldbl_2:6.0.0+dfsg-6 libgomp1_4.9.2-10 libgpg-error0_1.17-3 libgsl0-dev_1.16+dfsg-2 libgsl0ldbl_1.16+dfsg-2 libharminv-dev_1.3.1-10 libharminv2_1.3.1-10 libhdf5-openmpi-8_1.8.13+docs-15 libhdf5-openmpi-dev_1.8.13+docs-15 libhwloc-dev_1.10.0-3 libhwloc5_1.10.0-3 libibverbs-dev_1.1.8-1 libibverbs1_1.1.8-1 libicu52_52.1-8 libisl10_0.12.2-2 libitm1_4.9.2-10 libjpeg-dev_1:1.3.1-12 libjpeg62-turbo_1:1.3.1-12 libjpeg62-turbo-dev_1:1.3.1-12 libkmod2_20-1 liblapack-dev_3.5.0-4 liblapack3_3.5.0-4 libllvm3.6_1:3.6-2 liblsan0_4.9.2-10 libltdl-dev_2.4.2-1.11 libltdl7_2.4.2-1.11 liblzma5_5.1.1alpha+20120614-2+b3 libmagic1_1:5.22+15-2 libmount1_2.25.2-5 libmpc3_1.0.3-1 libmpfr4_3.1.2-3 libncurses5_5.9+20140913-1+b1 libncurses5-dev_5.9+20140913-1+b1 libncursesw5_5.9+20140913-1+b1 libnuma-dev_2.0.10-1 libnuma1_2.0.10-1 libobjc-4.9-dev_4.9.2-10 libobjc4_4.9.2-10 libopenmpi-dev_1.6.5-9.2 libopenmpi1.6_1.6.5-9.2 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpcre3_2:8.35-3.3 libpipeline1_1.4.0-1 libprocps3_2:3.3.9-9 libquadmath0_4.9.2-10 libreadline6_6.3-8+b3 libreadline6-dev_6.3-8+b3 libselinux1_2.3-2 libsemanage-common_2.3-1 libsemanage1_2.3-1+b1 libsepol1_2.3-2 libsigsegv2_2.10-4+b1 libslang2_2.3.0-2 libsmartcols1_2.25.2-5 libss2_1.42.12-1.1 libstdc++-4.9-dev_4.9.2-10 libstdc++6_4.9.2-10 libsystemd0_215-12 libtimedate-perl_2.3000-2 libtinfo-dev_5.9+20140913-1+b1 libtinfo5_5.9+20140913-1+b1 libtool_2.4.2-1.11 libtsan0_4.9.2-10 libubsan0_4.9.2-10 libudev1_215-12 libunistring0_0.9.3-5.2+b1 libusb-0.1-4_2:0.1.12-25 libustr-1.0-1_1.0.4-3+b2 libuuid1_2.25.2-5 libxml2_2.9.2+dfsg1-3 linux-libc-dev_3.16.7-ckt7-1 login_1:4.2-3 lsb-base_4.1+Debian13+nmu1 m4_1.4.17-4 make_4.0-8.1 man-db_2.7.0.2-5 mawk_1.3.3-17 mount_2.25.2-5 multiarch-support_2.19-17 ncurses-base_5.9+20140913-1 ncurses-bin_5.9+20140913-1+b1 nvi_1.81.6-11+b1 openmpi-common_1.6.5-9.2 passwd_1:4.2-3 patch_2.7.5-1 perl_5.20.2-2 perl-base_5.20.2-2 perl-modules_5.20.2-2 pkg-config_0.28-1 po-debconf_1.0.16+nmu3 procps_2:3.3.9-9 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-meep-openmpi-dummy_0.invalid.0 sed_4.2.2-4+b1 sensible-utils_0.0.9 startpar_0.59-3 sudo_1.8.12-1 systemd_215-12 systemd-sysv_215-12 sysv-rc_2.88dsf-58 sysvinit-utils_2.88dsf-58 tar_1.27.1-2+b1 tzdata_2015b-1 udev_215-12 util-linux_2.25.2-5 xz-utils_5.1.1alpha+20120614-2+b3 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Sun Aug 3 13:09:11 2014 UTC using DSA key ID 54B99890 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./meep-openmpi_1.2.1-2.dsc dpkg-source: info: extracting meep-openmpi in meep-openmpi-1.2.1 dpkg-source: info: unpacking meep-openmpi_1.2.1.orig.tar.gz dpkg-source: info: unpacking meep-openmpi_1.2.1-2.debian.tar.xz dpkg-source: info: applying package-name-reconfigure.patch Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── DEB_BUILD_OPTIONS=parallel=10 HOME=/sbuild-nonexistent LOGNAME=user PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user SCHROOT_SESSION_ID=unstable-amd64-sbuild-5d29da8f-cd56-422e-b994-71568c55a4f2 SCHROOT_UID=1001 SCHROOT_USER=user SHELL=/bin/sh USER=user dpkg-buildpackage ───────────────── dpkg-buildpackage: source package meep-openmpi dpkg-buildpackage: source version 1.2.1-2 dpkg-buildpackage: source distribution unstable dpkg-buildpackage: source changed by Thorsten Alteholz dpkg-source --before-build meep-openmpi-1.2.1 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean dh clean --with autoreconf dh_testdir dh_auto_clean dh_autoreconf_clean debian/rules override_dh_clean make[1]: Entering directory '/«PKGBUILDDIR»' # we do not need this anymore rm -f tests/latest_output dh_clean make[1]: Leaving directory '/«PKGBUILDDIR»' debian/rules build-arch dh build-arch --with autoreconf dh_testdir -a dh_autoreconf -a configure.ac:120: warning: AC_REQUIRE: `AC_PROG_F77' was expanded before it was required configure.ac:120: http://www.gnu.org/software/autoconf/manual/autoconf.html#Expanded-Before-Required ../../lib/autoconf/fortran.m4:254: AC_LANG_COMPILER(Fortran 77) is expanded from... ../../lib/autoconf/lang.m4:329: AC_LANG_COMPILER_REQUIRE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... m4/libtool.m4:1130: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4542: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:7164: _LT_LANG_F77_CONFIG is expanded from... m4/libtool.m4:819: _LT_LANG is expanded from... m4/libtool.m4:801: LT_LANG is expanded from... ../../lib/autoconf/fortran.m4:727: AC_F77_LIBRARY_LDFLAGS is expanded from... ../../lib/autoconf/fortran.m4:1004: _AC_F77_NAME_MANGLING is expanded from... ../../lib/autoconf/fortran.m4:1071: AC_F77_WRAPPERS is expanded from... configure.ac:120: the top level configure.ac:357: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/headers.m4:129: _AC_CHECK_HEADER_MONGREL is expanded from... ../../lib/autoconf/headers.m4:67: AC_CHECK_HEADER is expanded from... configure.ac:357: the top level configure.ac:120: warning: AC_REQUIRE: `AC_PROG_F77' was expanded before it was required configure.ac:120: http://www.gnu.org/software/autoconf/manual/autoconf.html#Expanded-Before-Required ../../lib/autoconf/fortran.m4:254: AC_LANG_COMPILER(Fortran 77) is expanded from... ../../lib/autoconf/lang.m4:329: AC_LANG_COMPILER_REQUIRE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... m4/libtool.m4:1130: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4542: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:7164: _LT_LANG_F77_CONFIG is expanded from... m4/libtool.m4:819: _LT_LANG is expanded from... m4/libtool.m4:801: LT_LANG is expanded from... ../../lib/autoconf/fortran.m4:727: AC_F77_LIBRARY_LDFLAGS is expanded from... ../../lib/autoconf/fortran.m4:1004: _AC_F77_NAME_MANGLING is expanded from... ../../lib/autoconf/fortran.m4:1071: AC_F77_WRAPPERS is expanded from... configure.ac:120: the top level configure.ac:357: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/headers.m4:129: _AC_CHECK_HEADER_MONGREL is expanded from... ../../lib/autoconf/headers.m4:67: AC_CHECK_HEADER is expanded from... configure.ac:357: the top level configure.ac:120: warning: AC_REQUIRE: `AC_PROG_F77' was expanded before it was required configure.ac:120: http://www.gnu.org/software/autoconf/manual/autoconf.html#Expanded-Before-Required ../../lib/autoconf/fortran.m4:254: AC_LANG_COMPILER(Fortran 77) is expanded from... ../../lib/autoconf/lang.m4:329: AC_LANG_COMPILER_REQUIRE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... m4/libtool.m4:1130: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4542: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:7164: _LT_LANG_F77_CONFIG is expanded from... m4/libtool.m4:819: _LT_LANG is expanded from... m4/libtool.m4:801: LT_LANG is expanded from... ../../lib/autoconf/fortran.m4:727: AC_F77_LIBRARY_LDFLAGS is expanded from... ../../lib/autoconf/fortran.m4:1004: _AC_F77_NAME_MANGLING is expanded from... ../../lib/autoconf/fortran.m4:1071: AC_F77_WRAPPERS is expanded from... configure.ac:120: the top level configure.ac:357: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/headers.m4:129: _AC_CHECK_HEADER_MONGREL is expanded from... ../../lib/autoconf/headers.m4:67: AC_CHECK_HEADER is expanded from... configure.ac:357: the top level libtoolize: putting auxiliary files in `.'. libtoolize: copying file `./ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIR, `m4'. libtoolize: copying file `m4/libtool.m4' libtoolize: copying file `m4/ltoptions.m4' libtoolize: copying file `m4/ltsugar.m4' libtoolize: copying file `m4/ltversion.m4' libtoolize: copying file `m4/lt~obsolete.m4' configure.ac:120: warning: AC_REQUIRE: `AC_PROG_F77' was expanded before it was required configure.ac:120: http://www.gnu.org/software/autoconf/manual/autoconf.html#Expanded-Before-Required ../../lib/autoconf/fortran.m4:254: AC_LANG_COMPILER(Fortran 77) is expanded from... ../../lib/autoconf/lang.m4:329: AC_LANG_COMPILER_REQUIRE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... m4/libtool.m4:1130: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4553: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:7179: _LT_LANG_F77_CONFIG is expanded from... m4/libtool.m4:819: _LT_LANG is expanded from... m4/libtool.m4:801: LT_LANG is expanded from... ../../lib/autoconf/fortran.m4:727: AC_F77_LIBRARY_LDFLAGS is expanded from... ../../lib/autoconf/fortran.m4:1004: _AC_F77_NAME_MANGLING is expanded from... ../../lib/autoconf/fortran.m4:1071: AC_F77_WRAPPERS is expanded from... configure.ac:120: the top level configure.ac:357: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/headers.m4:129: _AC_CHECK_HEADER_MONGREL is expanded from... ../../lib/autoconf/headers.m4:67: AC_CHECK_HEADER is expanded from... configure.ac:357: the top level configure.ac:120: warning: AC_REQUIRE: `AC_PROG_F77' was expanded before it was required configure.ac:120: http://www.gnu.org/software/autoconf/manual/autoconf.html#Expanded-Before-Required ../../lib/autoconf/fortran.m4:254: AC_LANG_COMPILER(Fortran 77) is expanded from... ../../lib/autoconf/lang.m4:329: AC_LANG_COMPILER_REQUIRE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... m4/libtool.m4:1130: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4553: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:7179: _LT_LANG_F77_CONFIG is expanded from... m4/libtool.m4:819: _LT_LANG is expanded from... m4/libtool.m4:801: LT_LANG is expanded from... ../../lib/autoconf/fortran.m4:727: AC_F77_LIBRARY_LDFLAGS is expanded from... ../../lib/autoconf/fortran.m4:1004: _AC_F77_NAME_MANGLING is expanded from... ../../lib/autoconf/fortran.m4:1071: AC_F77_WRAPPERS is expanded from... configure.ac:120: the top level configure.ac:357: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/headers.m4:129: _AC_CHECK_HEADER_MONGREL is expanded from... ../../lib/autoconf/headers.m4:67: AC_CHECK_HEADER is expanded from... configure.ac:357: the top level configure.ac:120: warning: AC_REQUIRE: `AC_PROG_F77' was expanded before it was required configure.ac:120: http://www.gnu.org/software/autoconf/manual/autoconf.html#Expanded-Before-Required ../../lib/autoconf/fortran.m4:254: AC_LANG_COMPILER(Fortran 77) is expanded from... ../../lib/autoconf/lang.m4:329: AC_LANG_COMPILER_REQUIRE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... m4/libtool.m4:1130: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4553: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:7179: _LT_LANG_F77_CONFIG is expanded from... m4/libtool.m4:819: _LT_LANG is expanded from... m4/libtool.m4:801: LT_LANG is expanded from... ../../lib/autoconf/fortran.m4:727: AC_F77_LIBRARY_LDFLAGS is expanded from... ../../lib/autoconf/fortran.m4:1004: _AC_F77_NAME_MANGLING is expanded from... ../../lib/autoconf/fortran.m4:1071: AC_F77_WRAPPERS is expanded from... configure.ac:120: the top level configure.ac:357: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/headers.m4:129: _AC_CHECK_HEADER_MONGREL is expanded from... ../../lib/autoconf/headers.m4:67: AC_CHECK_HEADER is expanded from... configure.ac:357: the top level configure.ac:120: warning: AC_REQUIRE: `AC_PROG_F77' was expanded before it was required configure.ac:120: http://www.gnu.org/software/autoconf/manual/autoconf.html#Expanded-Before-Required ../../lib/autoconf/fortran.m4:254: AC_LANG_COMPILER(Fortran 77) is expanded from... ../../lib/autoconf/lang.m4:329: AC_LANG_COMPILER_REQUIRE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... m4/libtool.m4:1130: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4553: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:7179: _LT_LANG_F77_CONFIG is expanded from... m4/libtool.m4:819: _LT_LANG is expanded from... m4/libtool.m4:801: LT_LANG is expanded from... ../../lib/autoconf/fortran.m4:727: AC_F77_LIBRARY_LDFLAGS is expanded from... ../../lib/autoconf/fortran.m4:1004: _AC_F77_NAME_MANGLING is expanded from... ../../lib/autoconf/fortran.m4:1071: AC_F77_WRAPPERS is expanded from... configure.ac:120: the top level configure.ac:357: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/headers.m4:129: _AC_CHECK_HEADER_MONGREL is expanded from... ../../lib/autoconf/headers.m4:67: AC_CHECK_HEADER is expanded from... configure.ac:357: the top level configure.ac:120: warning: AC_REQUIRE: `AC_PROG_F77' was expanded before it was required configure.ac:120: http://www.gnu.org/software/autoconf/manual/autoconf.html#Expanded-Before-Required ../../lib/autoconf/fortran.m4:254: AC_LANG_COMPILER(Fortran 77) is expanded from... ../../lib/autoconf/lang.m4:329: AC_LANG_COMPILER_REQUIRE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... m4/libtool.m4:1130: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4553: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:7179: _LT_LANG_F77_CONFIG is expanded from... m4/libtool.m4:819: _LT_LANG is expanded from... m4/libtool.m4:801: LT_LANG is expanded from... ../../lib/autoconf/fortran.m4:727: AC_F77_LIBRARY_LDFLAGS is expanded from... ../../lib/autoconf/fortran.m4:1004: _AC_F77_NAME_MANGLING is expanded from... ../../lib/autoconf/fortran.m4:1071: AC_F77_WRAPPERS is expanded from... configure.ac:120: the top level configure.ac:357: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from... ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from... ../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from... ../../lib/autoconf/headers.m4:129: _AC_CHECK_HEADER_MONGREL is expanded from... ../../lib/autoconf/headers.m4:67: AC_CHECK_HEADER is expanded from... configure.ac:357: the top level debian/rules override_dh_auto_configure make[1]: Entering directory '/«PKGBUILDDIR»' mv configure configure.org cat configure.org | \ sed "s/PACKAGE_NAME='meep'/PACKAGE_NAME='meep-openmpi'/g" |\ sed "s/PACKAGE='meep'/PACKAGE='meep-openmpi'/g" > configure chmod 755 configure F77=gfortran dh_auto_configure -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl3 --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --with-mpi=yes configure: WARNING: unrecognized options: --enable-cxx checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... no checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of x86_64-linux-gnu-g++... none checking for mpic++... mpic++ checking for MPI_Init... yes checking for mpi.h... yes checking for extra flag needed to combine stdio.h and mpi.h... none checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking dependency style of x86_64-linux-gnu-gcc... none checking for C++ compiler vendor... gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/x86_64-linux-gnu-ld checking if the linker (/usr/bin/x86_64-linux-gnu-ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/x86_64-linux-gnu-ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking command to parse /usr/bin/nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... yes checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/x86_64-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... mpic++ -E checking for ld used by mpic++... /usr/bin/x86_64-linux-gnu-ld -m elf_x86_64 checking if the linker (/usr/bin/x86_64-linux-gnu-ld -m elf_x86_64) is GNU ld... yes checking whether the mpic++ linker (/usr/bin/x86_64-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/bin/x86_64-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for latex2html... no configure: WARNING: Cannot find latex2html in your path! checking for sin in -lm... yes checking for fftw_plan_dft_1d in -lfftw3... yes checking for x86_64-linux-gnu-g77... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking for x86_64-linux-gnu-g77... (cached) gfortran checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/x86_64-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for sgemm_... no checking for ATL_xerbla in -latlas... yes checking for sgemm_ in -lf77blas... yes checking for cblas_dgemm in -lcblas... yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for pkg-config... /usr/bin/pkg-config checking for harminv >= 1.1... yes checking HARMINV_CFLAGS... checking HARMINV_LIBS... -lharminv checking mpb.h usability... no checking mpb.h presence... no checking for mpb.h... no checking for cblas_cgemm... yes checking for gsl_sf_bessel_Jn in -lgsl... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5Pset_mpi... no checking for H5Pset_fapl_mpio... yes checking for mpirun... no checking for guile-config... guile-config checking if linking to guile works... yes checking libguile.h usability... yes checking libguile.h presence... yes checking for libguile.h... yes checking guile/gh.h usability... no checking guile/gh.h presence... no checking for guile/gh.h... no checking for scm_make_smob_type... yes checking for SCM_SMOB_PREDICATE... no checking for SCM_SMOB_DATA... no checking for SCM_NEWSMOB... no checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking ctl.h usability... yes checking ctl.h presence... yes checking for ctl.h... yes checking whether libctl version is at least 3.2.0... ok checking for libctl_quiet feature... yes checking for basename in -lgen... no checking for feenableexcept... yes checking whether feenableexcept declaration is usable... yes checking whether to catch and ignore SIGFPE signals... no checking whether time.h and sys/time.h may both be included... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for BSDgettimeofday... no checking for gettimeofday... yes checking for cblas_ddot... yes checking for cblas_daxpy... yes checking for jn... yes checking for C/C++ restrict keyword... __restrict checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating meep-pkgconfig config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating examples/Makefile config.status: creating libctl/Makefile config.status: creating libctl/meep.scm config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --enable-cxx make[1]: Leaving directory '/«PKGBUILDDIR»' dh_auto_build -a make[1]: Entering directory '/«PKGBUILDDIR»' make all-recursive make[2]: Entering directory '/«PKGBUILDDIR»' Making all in src make[3]: Entering directory '/«PKGBUILDDIR»/src' make all-am make[4]: Entering directory '/«PKGBUILDDIR»/src' CXX anisotropic_averaging.lo CXX bands.lo bands.cpp:364:7: warning: comparison of array 'this->k' equal to a null pointer is always false [-Wtautological-pointer-compare] if (k == 0 && gv.dim == Dcyl && m != 0) fields_considered /= 2; ^ ~ 1 warning generated. CXX boundaries.lo CXX bicgstab.lo CXX casimir.lo CXX control_c.lo CXX cw_fields.lo CXX dft.lo CXX dft_ldos.lo CXX energy_and_flux.lo CXX fields.lo CXX loop_in_chunks.lo CXX grace.lo grace.cpp:71:23: warning: ignoring return value of function declared with warn_unused_result attribute [-Wunused-result] if (my_rank() == 0) system(gracecmd); ^~~~~~ ~~~~~~~~ 1 warning generated. CXX h5fields.lo CXX h5file.lo CXX initialize.lo CXX integrate.lo CXX integrate2.lo CXX monitor.lo CXX mympi.lo 0 libLLVM-3.6.so.1 0x00007f558ebb7f52 llvm::sys::PrintStackTrace(_IO_FILE*) + 34 1 libLLVM-3.6.so.1 0x00007f558ebb66a1 2 libpthread.so.0 0x00007f558d8218d0 3 clang 0x00000000012c13a0 clang::Decl::getTranslationUnitDecl() + 0 4 clang 0x00000000012c1409 clang::Decl::getASTContext() const + 9 5 clang 0x000000000136af99 6 clang 0x0000000001371889 clang::ASTContext::getASTRecordLayout(clang::RecordDecl const*) const + 377 7 clang 0x0000000001249fe7 clang::ASTContext::getTypeInfoImpl(clang::Type const*) const + 599 8 clang 0x0000000001249b74 clang::ASTContext::getTypeInfo(clang::Type const*) const + 164 9 clang 0x0000000001249e63 clang::ASTContext::getTypeInfoImpl(clang::Type const*) const + 211 10 clang 0x0000000001249b74 clang::ASTContext::getTypeInfo(clang::Type const*) const + 164 11 clang 0x000000000124cef5 clang::ASTContext::getTypeInfoInChars(clang::Type const*) const + 21 12 clang 0x000000000124cfa0 clang::ASTContext::getTypeInfoInChars(clang::QualType) const + 16 13 clang 0x000000000124d029 clang::ASTContext::getTypeSizeInChars(clang::QualType) const + 9 14 clang 0x0000000000695f77 15 clang 0x0000000001332986 16 clang 0x0000000001332e2d 17 clang 0x0000000001322d70 18 clang 0x0000000001323a36 19 clang 0x0000000001324b16 clang::Expr::EvaluateForOverflow(clang::ASTContext const&) const + 390 20 clang 0x0000000000cb4a16 clang::Sema::ActOnFinishFullExpr(clang::Expr*, clang::SourceLocation, bool, bool, bool) + 294 21 clang 0x0000000000abfbf4 clang::Parser::ParseIfStatement(clang::SourceLocation*) + 388 22 clang 0x0000000000abe0db clang::Parser::ParseStatementOrDeclarationAfterAttributes(llvm::SmallVector&, bool, clang::SourceLocation*, clang::Parser::ParsedAttributesWithRange&) + 2091 23 clang 0x0000000000abe644 clang::Parser::ParseStatementOrDeclaration(llvm::SmallVector&, bool, clang::SourceLocation*) + 116 24 clang 0x0000000000ac0e6e clang::Parser::ParseCompoundStatementBody(bool) + 1774 25 clang 0x0000000000ac2c6e clang::Parser::ParseFunctionStatementBody(clang::Decl*, clang::Parser::ParseScope&) + 190 26 clang 0x0000000000a53ccd clang::Parser::ParseFunctionDefinition(clang::ParsingDeclarator&, clang::Parser::ParsedTemplateInfo const&, clang::Parser::LateParsedAttrList*) + 1101 27 clang 0x0000000000a6bc4d clang::Parser::ParseDeclGroup(clang::ParsingDeclSpec&, unsigned int, clang::SourceLocation*, clang::Parser::ForRangeInit*) + 1949 28 clang 0x0000000000a4fb21 clang::Parser::ParseDeclOrFunctionDefInternal(clang::Parser::ParsedAttributesWithRange&, clang::ParsingDeclSpec&, clang::AccessSpecifier) + 273 29 clang 0x0000000000a501b1 30 clang 0x0000000000a501ef clang::Parser::ParseDeclarationOrFunctionDefinition(clang::Parser::ParsedAttributesWithRange&, clang::ParsingDeclSpec*, clang::AccessSpecifier) + 31 31 clang 0x0000000000a553e3 clang::Parser::ParseExternalDeclaration(clang::Parser::ParsedAttributesWithRange&, clang::ParsingDeclSpec*) + 259 32 clang 0x0000000000a790f9 clang::Parser::ParseInnerNamespace(std::vector >&, std::vector >&, std::vector >&, unsigned int, clang::SourceLocation&, clang::ParsedAttributes&, clang::BalancedDelimiterTracker&) + 377 33 clang 0x0000000000a796bb clang::Parser::ParseNamespace(unsigned int, clang::SourceLocation&, clang::SourceLocation) + 1243 34 clang 0x0000000000a6ccd4 clang::Parser::ParseDeclaration(unsigned int, clang::SourceLocation&, clang::Parser::ParsedAttributesWithRange&) + 660 35 clang 0x0000000000a55405 clang::Parser::ParseExternalDeclaration(clang::Parser::ParsedAttributesWithRange&, clang::ParsingDeclSpec*) + 293 36 clang 0x0000000000a55b50 clang::Parser::ParseTopLevelDecl(clang::OpaquePtr&) + 448 37 clang 0x0000000000a4b883 clang::ParseAST(clang::Sema&, bool, bool) + 275 38 clang 0x00000000006ed186 clang::FrontendAction::Execute() + 118 39 clang 0x00000000006ca4f1 clang::CompilerInstance::ExecuteAction(clang::FrontendAction&) + 289 40 clang 0x00000000006b3263 clang::ExecuteCompilerInvocation(clang::CompilerInstance*) + 1827 41 clang 0x00000000006ad848 cc1_main(llvm::ArrayRef, char const*, void*) + 1256 42 clang 0x00000000006ace76 main + 9910 43 libc.so.6 0x00007f558c3f9b45 __libc_start_main + 245 44 clang 0x00000000006acee5 Stack dump: 0. Program arguments: /usr/lib/llvm-3.6/bin/clang -cc1 -triple x86_64-pc-linux-gnu -emit-obj -disable-free -disable-llvm-verifier -main-file-name mympi.cpp -mrelocation-model pic -pic-level 2 -mthread-model posix -fmath-errno -masm-verbose -mconstructor-aliases -munwind-tables -fuse-init-array -target-cpu x86-64 -target-linker-version 2.25 -momit-leaf-frame-pointer -g -dwarf-column-info -coverage-file /«PKGBUILDDIR»/src/.libs/mympi.o -resource-dir /usr/lib/llvm-3.6/bin/../lib/clang/3.6.0 -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 -D PIC -I . -I .. -I ../src -I /usr/include/hdf5/openmpi -I /usr/include/guile/2.0 -I /usr/lib/openmpi/include -I /usr/lib/openmpi/include/openmpi -internal-isystem /usr/bin/../lib/gcc/x86_64-linux-gnu/4.9/../../../../include/c++/4.9 -internal-isystem /usr/bin/../lib/gcc/x86_64-linux-gnu/4.9/../../../../include/x86_64-linux-gnu/c++/4.9 -internal-isystem /usr/bin/../lib/gcc/x86_64-linux-gnu/4.9/../../../../include/x86_64-linux-gnu/c++/4.9 -internal-isystem /usr/bin/../lib/gcc/x86_64-linux-gnu/4.9/../../../../include/c++/4.9/backward -internal-isystem /usr/local/include -internal-isystem /usr/lib/llvm-3.6/bin/../lib/clang/3.6.0/include -internal-externc-isystem /usr/bin/../lib/gcc/x86_64-linux-gnu/4.9/include -internal-externc-isystem /usr/include/x86_64-linux-gnu -internal-externc-isystem /include -internal-externc-isystem /usr/include -O2 -Wformat -Werror=format-security -fdeprecated-macro -fdebug-compilation-dir /«PKGBUILDDIR»/src -ferror-limit 19 -fmessage-length 0 -pthread -stack-protector 2 -mstackrealign -fobjc-runtime=gcc -fcxx-exceptions -fexceptions -fdiagnostics-show-option -vectorize-loops -vectorize-slp -o .libs/mympi.o -x c++ mympi.cpp 1. mympi.cpp:313:5: current parser token 'out' 2. mympi.cpp:70:1: parsing namespace 'meep' 3. mympi.cpp:309:40: parsing function body 'sum_to_all' 4. mympi.cpp:309:40: in compound statement ('{}') clang: error: unable to execute command: Segmentation fault clang: error: clang frontend command failed due to signal (use -v to see invocation) Debian clang version 3.6.0-2 (tags/RELEASE_360/final) (based on LLVM 3.6.0) Target: x86_64-pc-linux-gnu Thread model: posix clang: note: diagnostic msg: PLEASE submit a bug report to http://bugs.debian.org/ and include the crash backtrace, preprocessed source, and associated run script. clang: note: diagnostic msg: ******************** PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT: Preprocessed source(s) and associated run script(s) are located at: clang: note: diagnostic msg: /tmp/mympi-d63a4a.cpp clang: note: diagnostic msg: /tmp/mympi-d63a4a.sh clang: note: diagnostic msg: ******************** make[4]: *** [mympi.lo] Error 1 Makefile:560: recipe for target 'mympi.lo' failed make[4]: Leaving directory '/«PKGBUILDDIR»/src' make[3]: *** [all] Error 2 Makefile:411: recipe for target 'all' failed make[3]: Leaving directory '/«PKGBUILDDIR»/src' make[2]: *** [all-recursive] Error 1 Makefile:481: recipe for target 'all-recursive' failed make[2]: Leaving directory '/«PKGBUILDDIR»' make[1]: *** [all] Error 2 Makefile:389: recipe for target 'all' failed make[1]: Leaving directory '/«PKGBUILDDIR»' dh_auto_build: make -j1 returned exit code 2 make: *** [build-arch] Error 2 debian/rules:26: recipe for target 'build-arch' failed dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 ──────────────────────────────────────────────────────────────────────────────── Build finished at 20150326-0518 Finished ──────── E: Build failure (dpkg-buildpackage died) ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /«BUILDDIR» Not cleaning session: cloned chroot in use ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Build Architecture: amd64 Build-Space: 14640 Build-Time: 78 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 19 Job: meep-openmpi_1.2.1-2 Machine Architecture: amd64 Package: meep-openmpi Package-Time: 123 Source-Version: 1.2.1-2 Space: 14640 Status: attempted Version: 1.2.1-2 ──────────────────────────────────────────────────────────────────────────────── Finished at 20150326-0518 Build needed 00:02:03, 14640k disc space DC-Status: Failed 123.71166082s DC-Time-Estimation: 123.71166082 versus expected 890 (r/m: 6.194148022108818 ; m: 123.71166082)