DC-Build-Header: libgpiv 0.6.1-4.3 / 2016-08-29 16:32:58 +0000 DC-Task: type:rebuild-binarch-only source:libgpiv version:0.6.1-4.3 chroot:unstable esttime:425 logfile:/tmp/libgpiv_0.6.1-4.3_unstable_clang3.8.log modes:clang:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang libgpiv_0.6.1-4.3' sbuild (Debian sbuild) 0.70.0 (03 Aug 2016) on ip-172-31-3-73.eu-central-1.compute.internal +==============================================================================+ | libgpiv 0.6.1-4.3 (amd64) Mon, 29 Aug 2016 16:32:58 +0000 | +==============================================================================+ Package: libgpiv Version: 0.6.1-4.3 Source Version: 0.6.1-4.3 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/unstable-amd64-sbuild-f2da9cd8-7271-41c9-bf95-016f7823f148' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang ---------- + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=3.8 + echo 'Install of clang-3.8' Install of clang-3.8 + apt-get update Get:1 http://127.0.0.1:9999/debian unstable InRelease [209 kB] Get:2 http://127.0.0.1:9999/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Translation-en [5451 kB] Get:5 http://127.0.0.1:9999/debian unstable/main Sources 2016-08-29-0319.00.pdiff [16.7 kB] Get:6 http://127.0.0.1:9999/debian unstable/main Sources 2016-08-29-0916.07.pdiff [5442 B] Get:6 http://127.0.0.1:9999/debian unstable/main Sources 2016-08-29-0916.07.pdiff [5442 B] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2016-08-29-0319.00.pdiff [13.2 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2016-08-29-0916.07.pdiff [3300 B] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2016-08-29-0916.07.pdiff [3300 B] Fetched 5755 kB in 2s (1966 kB/s) Reading package lists... W: No sandbox user '_apt' on the system, can not drop privileges + apt-get install --yes --no-install-recommends --force-yes clang-3.8 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libbsd0 libclang-common-3.8-dev libclang1-3.8 libedit2 libffi6 libllvm3.8 libobjc-6-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-3.8-doc Recommended packages: llvm-3.8-dev python The following NEW packages will be installed: clang-3.8 libbsd0 libclang-common-3.8-dev libclang1-3.8 libedit2 libffi6 libllvm3.8 libobjc-6-dev libobjc4 0 upgraded, 9 newly installed, 0 to remove and 1 not upgraded. Need to get 38.3 MB of archives. After this operation, 162 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.3-1 [83.0 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20150325-1+b1 [85.2 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libffi6 amd64 3.2.1-4 [20.4 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libllvm3.8 amd64 1:3.8.1-9 [10.3 MB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 6.2.0-1 [110 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-6-dev amd64 6.2.0-1 [394 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-3.8 amd64 1:3.8.1-9 [4188 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-3.8-dev amd64 1:3.8.1-9 [1477 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 clang-3.8 amd64 1:3.8.1-9 [21.6 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 38.3 MB in 1s (22.4 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9446 files and directories currently installed.) Preparing to unpack .../0-libbsd0_0.8.3-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.3-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../1-libedit2_3.1-20150325-1+b1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20150325-1+b1) ... Selecting previously unselected package libffi6:amd64. Preparing to unpack .../2-libffi6_3.2.1-4_amd64.deb ... Unpacking libffi6:amd64 (3.2.1-4) ... Selecting previously unselected package libllvm3.8:amd64. Preparing to unpack .../3-libllvm3.8_1%3a3.8.1-9_amd64.deb ... Unpacking libllvm3.8:amd64 (1:3.8.1-9) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../4-libobjc4_6.2.0-1_amd64.deb ... Unpacking libobjc4:amd64 (6.2.0-1) ... Selecting previously unselected package libobjc-6-dev:amd64. Preparing to unpack .../5-libobjc-6-dev_6.2.0-1_amd64.deb ... Unpacking libobjc-6-dev:amd64 (6.2.0-1) ... Selecting previously unselected package libclang1-3.8:amd64. Preparing to unpack .../6-libclang1-3.8_1%3a3.8.1-9_amd64.deb ... Unpacking libclang1-3.8:amd64 (1:3.8.1-9) ... Selecting previously unselected package libclang-common-3.8-dev. Preparing to unpack .../7-libclang-common-3.8-dev_1%3a3.8.1-9_amd64.deb ... Unpacking libclang-common-3.8-dev (1:3.8.1-9) ... Selecting previously unselected package clang-3.8. Preparing to unpack .../8-clang-3.8_1%3a3.8.1-9_amd64.deb ... Unpacking clang-3.8 (1:3.8.1-9) ... Setting up libobjc4:amd64 (6.2.0-1) ... Setting up libbsd0:amd64 (0.8.3-1) ... Processing triggers for libc-bin (2.23-5) ... Setting up libobjc-6-dev:amd64 (6.2.0-1) ... Setting up libffi6:amd64 (3.2.1-4) ... Setting up libedit2:amd64 (3.1-20150325-1+b1) ... Setting up libllvm3.8:amd64 (1:3.8.1-9) ... Setting up libclang-common-3.8-dev (1:3.8.1-9) ... Setting up libclang1-3.8:amd64 (1:3.8.1-9) ... Setting up clang-3.8 (1:3.8.1-9) ... Processing triggers for libc-bin (2.23-5) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. W: No sandbox user '_apt' on the system, can not drop privileges + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6' + cd /usr/bin + for VERSION in '$VERSIONS' + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-3.8 g++-4.6 + ln -s clang-3.8 gcc-4.6 + ln -s clang-3.8 cpp-4.6 + ln -s clang-3.8 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-3.8 g++-4.7 + ln -s clang-3.8 gcc-4.7 + ln -s clang-3.8 cpp-4.7 + ln -s clang-3.8 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-3.8 g++-4.8 + ln -s clang-3.8 gcc-4.8 + ln -s clang-3.8 cpp-4.8 + ln -s clang-3.8 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-3.8 g++-4.9 + ln -s clang-3.8 gcc-4.9 + ln -s clang-3.8 cpp-4.9 + ln -s clang-3.8 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-3.8 g++-5 + ln -s clang-3.8 gcc-5 + ln -s clang-3.8 cpp-5 + ln -s clang-3.8 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in '$VERSIONS' + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-3.8 g++-6 + ln -s clang-3.8 gcc-6 + ln -s clang-3.8 cpp-6 + ln -s clang-3.8 gcc + echo 'gcc-6 hold' + dpkg --set-selections + echo 'g++-6 hold' + dpkg --set-selections + cd - /build/libgpiv-9ln3TJ + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... W: No sandbox user '_apt' on the system, can not drop privileges Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: linux-libc-dev 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1158 kB of archives. After this operation, 60.4 kB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 linux-libc-dev amd64 4.7.2-1 [1158 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1158 kB in 0s (70.1 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9769 files and directories currently installed.) Preparing to unpack .../linux-libc-dev_4.7.2-1_amd64.deb ... Unpacking linux-libc-dev:amd64 (4.7.2-1) over (4.6.4-1) ... Setting up linux-libc-dev:amd64 (4.7.2-1) ... W: No sandbox user '_apt' on the system, can not drop privileges +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... Need to get 1495 kB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main libgpiv 0.6.1-4.3 (dsc) [2139 B] Get:2 http://127.0.0.1:9999/debian unstable/main libgpiv 0.6.1-4.3 (tar) [1479 kB] Get:3 http://127.0.0.1:9999/debian unstable/main libgpiv 0.6.1-4.3 (diff) [14.5 kB] Fetched 1495 kB in 0s (8120 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libgpiv-9ln3TJ/libgpiv-0.6.1' with '<>' I: NOTICE: Log filtering will replace 'build/libgpiv-9ln3TJ' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-iuqcDO/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-iuqcDO/apt_archive ./ InRelease Get:2 copy:/<>/resolver-iuqcDO/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-iuqcDO/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-iuqcDO/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-iuqcDO/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (0 B/s) Reading package lists... W: No sandbox user '_apt' on the system, can not drop privileges Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 776 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-iuqcDO/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [776 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 776 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 9775 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... W: No sandbox user '_apt' on the system, can not drop privileges +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 5.0.24), quilt (>= 0.40), autotools-dev, libfftw3-dev, libgsl-dev, libhdf5-dev (>= 1.8.8), libglib2.0-dev, libpng-dev, netpbm, libgomp1, doxygen, mpi-default-dev Filtered Build-Depends: debhelper (>= 5.0.24), quilt (>= 0.40), autotools-dev, libfftw3-dev, libgsl-dev, libhdf5-dev (>= 1.8.8), libglib2.0-dev, libpng-dev, netpbm, libgomp1, doxygen, mpi-default-dev dpkg-deb: building package 'sbuild-build-depends-libgpiv-dummy' in '/<>/resolver-dZW2Mf/apt_archive/sbuild-build-depends-libgpiv-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-libgpiv-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-dZW2Mf/apt_archive ./ InRelease Get:2 copy:/<>/resolver-dZW2Mf/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-dZW2Mf/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-dZW2Mf/apt_archive ./ Sources [424 B] Get:5 copy:/<>/resolver-dZW2Mf/apt_archive ./ Packages [515 B] Fetched 1896 B in 0s (0 B/s) Reading package lists... W: No sandbox user '_apt' on the system, can not drop privileges Reading package lists... Install libgpiv build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism diffstat doxygen file gcc-5-base gettext gettext-base groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libasan2 libclang1-3.6 libcroco3 libelf1 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgcc-5-dev libgfortran3 libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libgsl-dev libgsl2 libhdf5-10 libhdf5-cpp-11 libhdf5-dev libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libllvm3.6v5 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmpdec2 libmpx0 libnetpbm10 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libobjc-5-dev libopenmpi-dev libopenmpi1.10 libpciaccess0 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpng-dev libpng16-16 libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libreadline6 libsigsegv2 libsqlite3-0 libssl1.0.2 libstdc++-5-dev libsz2 libtiff5 libtimedate-perl libtool libunistring0 libxml2 m4 man-db mime-support mpi-default-dev netpbm ocl-icd-libopencl1 openmpi-common pkg-config po-debconf python3 python3-minimal python3.5 python3.5-minimal quilt readline-common zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui graphviz gettext-doc libasprintf-dev libgettextpo-dev groff libfftw3-doc libglib2.0-doc gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html libhdf5-doc libhwloc-contrib-plugins libtool-doc opennmpi-doc pciutils libstdc++-5-doc gfortran | fortran95-compiler gcj-jdk less www-browser opencl-icd libmail-box-perl python3-doc python3-tk python3-venv python3.5-venv python3.5-doc binfmt-support procmail default-mta | mail-transport-agent readline-doc Recommended packages: curl | wget | lynx-cur shared-mime-info xdg-user-dirs openmpi-bin libpng-tools xml-core ghostscript libmail-sendmail-perl less The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism diffstat doxygen file gcc-5-base gettext gettext-base groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libasan2 libclang1-3.6 libcroco3 libelf1 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgcc-5-dev libgfortran3 libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libgsl-dev libgsl2 libhdf5-10 libhdf5-cpp-11 libhdf5-dev libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libllvm3.6v5 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmpdec2 libmpx0 libnetpbm10 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libobjc-5-dev libopenmpi-dev libopenmpi1.10 libpciaccess0 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpng-dev libpng16-16 libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libreadline6 libsigsegv2 libsqlite3-0 libssl1.0.2 libstdc++-5-dev libsz2 libtiff5 libtimedate-perl libtool libunistring0 libxml2 m4 man-db mime-support mpi-default-dev netpbm ocl-icd-libopencl1 openmpi-common pkg-config po-debconf python3 python3-minimal python3.5 python3.5-minimal quilt readline-common sbuild-build-depends-libgpiv-dummy zlib1g-dev 0 upgraded, 108 newly installed, 0 to remove and 0 not upgraded. Need to get 75.1 MB of archives. After this operation, 308 MB of additional disk space will be used. Get:1 copy:/<>/resolver-dZW2Mf/apt_archive ./ sbuild-build-depends-libgpiv-dummy 0.invalid.0 [860 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-8 [1162 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 9.0.10 [184 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.4.1-2 [27.6 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.7.5-1 [1003 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-double3 amd64 3.3.4-2+b1 [731 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-long3 amd64 3.3.4-2+b1 [313 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.4-2+b1 [556 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-single3 amd64 3.3.4-2+b1 [759 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libpcrecpp0v5 amd64 2:8.39-2 [151 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.0.2 amd64 1.0.2h-1 [1287 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-minimal amd64 3.5.2-3 [568 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.0-1 [82.0 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 python3.5-minimal amd64 3.5.2-3 [1644 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 python3-minimal amd64 3.5.1-4 [35.3 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 mime-support all 3.60 [36.7 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 libmpdec2 amd64 2.4.2-1 [85.2 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 6.3-8 [57.7 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 libreadline6 amd64 6.3-8+b4 [142 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.14.1-1 [559 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-stdlib amd64 3.5.2-3 [2126 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 python3.5 amd64 3.5.2-3 [214 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 libpython3-stdlib amd64 3.5.1-4 [18.6 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 dh-python all 2.20160818 [83.0 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 python3 amd64 3.5.1-4 [21.6 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 libjbig0 amd64 2.1-3.1 [30.7 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 gcc-5-base amd64 5.4.1-1 [173 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.28-4 [210 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.28-4 [109 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.28-4 [62.9 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-1 [121 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-3 [7676 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-1+b1 [919 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.10-5 [28.9 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.17-5 [255 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-10 [338 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20160430.1 [72.6 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15-4 [735 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-1 [433 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.48.1-3 [2707 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.11-1 [143 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 libunistring0 amd64 0.9.6+really0.9.3-0.1 [279 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-1 [1493 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.19 [249 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.59-1 [95.5 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.023-2 [13.4 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.023-2 [8202 B] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2 [545 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 12 [15.8 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 9.20160814 [800 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 diffstat amd64 1.61-1 [31.9 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 libllvm3.6v5 amd64 1:3.6.2-3 [8010 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 libasan2 amd64 5.4.1-1 [261 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 libmpx0 amd64 5.4.1-1 [9410 B] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 libgcc-5-dev amd64 5.4.1-1 [2214 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 libstdc++-5-dev amd64 5.4.1-1 [1417 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-5-dev amd64 5.4.1-1 [373 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-3.6 amd64 1:3.6.2-3 [3664 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 doxygen amd64 1.8.11-3 [3773 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 hdf5-helpers amd64 1.8.16+docs-8 [35.4 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 libaec0 amd64 0.3.2-1 [18.5 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 libelf1 amd64 0.166-2 [172 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-bin amd64 3.3.4-2+b1 [48.8 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-dev amd64 3.3.4-2+b1 [2126 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran3 amd64 6.2.0-1 [264 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-data all 2.48.1-3 [2502 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-bin amd64 2.48.1-3 [1626 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 libpcre16-3 amd64 2:8.39-2 [258 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 libpcre32-3 amd64 2:8.39-2 [248 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 libpcre3-dev amd64 2:8.39-2 [645 kB] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 pkg-config amd64 0.29-4 [62.5 kB] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 zlib1g-dev amd64 1:1.2.8.dfsg-2+b1 [206 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-dev amd64 2.48.1-3 [2961 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 libgsl2 amd64 2.1+dfsg-2 [862 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 libgsl-dev amd64 2.1+dfsg-2 [958 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 libsz2 amd64 0.3.2-1 [5730 B] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-10 amd64 1.8.16+docs-8 [1028 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-cpp-11 amd64 1.8.16+docs-8 [126 kB] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.0-1 [132 kB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:1.5.0-1 [210 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg-dev all 1:1.5.0-1 [54.8 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 libaec-dev amd64 0.3.2-1 [17.4 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-dev amd64 1.8.16+docs-8 [5032 kB] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libltdl7 amd64 2.4.6-2 [389 kB] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 libltdl-dev amd64 2.4.6-2 [161 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libnetpbm10 amd64 2:10.0-15.3+b1 [85.1 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 libnl-3-200 amd64 3.2.27-1 [61.4 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libnl-route-3-200 amd64 3.2.27-1 [135 kB] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 libnuma1 amd64 2.0.11-1 [32.5 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 libpciaccess0 amd64 0.13.4-1 [49.8 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 libpng16-16 amd64 1.6.24-2 [279 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 libpng-dev amd64 1.6.24-2 [247 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5 amd64 4.0.6-2 [222 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 netpbm amd64 2:10.0-15.3+b1 [1002 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 quilt all 0.63-3 [312 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc5 amd64 1.11.3-2 [104 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 libnuma-dev amd64 2.0.11-1 [45.5 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc-dev amd64 1.11.3-2 [161 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.2.9-1 [36.1 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc-plugins amd64 1.11.3-2 [16.0 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 libibverbs1 amd64 1.2.0-2 [37.7 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 libibverbs-dev amd64 1.2.0-2 [93.7 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 libopenmpi1.10 amd64 1.10.3-3 [2109 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 openmpi-common all 1.10.3-3 [143 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 libopenmpi-dev amd64 1.10.3-3 [628 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 mpi-default-dev amd64 1.7 [4786 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 75.1 MB in 9s (8047 kB/s) Selecting previously unselected package groff-base. (Reading database ... 9775 files and directories currently installed.) Preparing to unpack .../00-groff-base_1.22.3-8_amd64.deb ... Unpacking groff-base (1.22.3-8) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_9.0.10_amd64.deb ... Unpacking bsdmainutils (9.0.10) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../02-libpipeline1_1.4.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.4.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../03-man-db_2.7.5-1_amd64.deb ... Unpacking man-db (2.7.5-1) ... Selecting previously unselected package libfftw3-double3:amd64. Preparing to unpack .../04-libfftw3-double3_3.3.4-2+b1_amd64.deb ... Unpacking libfftw3-double3:amd64 (3.3.4-2+b1) ... Selecting previously unselected package libfftw3-long3:amd64. Preparing to unpack .../05-libfftw3-long3_3.3.4-2+b1_amd64.deb ... Unpacking libfftw3-long3:amd64 (3.3.4-2+b1) ... 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Setting up libpython3.5-minimal:amd64 (3.5.2-3) ... Setting up libexpat1:amd64 (2.2.0-1) ... Setting up python3.5-minimal (3.5.2-3) ... Setting up python3-minimal (3.5.1-4) ... Selecting previously unselected package python3. (Reading database ... 11388 files and directories currently installed.) Preparing to unpack .../00-python3_3.5.1-4_amd64.deb ... Unpacking python3 (3.5.1-4) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../01-libjbig0_2.1-3.1_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1) ... Selecting previously unselected package gcc-5-base:amd64. Preparing to unpack .../02-gcc-5-base_5.4.1-1_amd64.deb ... Unpacking gcc-5-base:amd64 (5.4.1-1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.28-4_amd64.deb ... Unpacking libmagic-mgc (1:5.28-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../04-libmagic1_1%3a5.28-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.28-4) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.28-4_amd64.deb ... Unpacking file (1:5.28-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-1_amd64.deb ... Unpacking gettext-base (0.19.8.1-1) ... Selecting previously unselected package libicu57:amd64. Preparing to unpack .../07-libicu57_57.1-3_amd64.deb ... Unpacking libicu57:amd64 (57.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../08-libxml2_2.9.4+dfsg1-1+b1_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-1+b1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../09-libsigsegv2_2.10-5_amd64.deb ... Unpacking libsigsegv2:amd64 (2.10-5) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.17-5_amd64.deb ... Unpacking m4 (1.4.17-5) ... Selecting previously unselected package autoconf. 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Setting up libfftw3-single3:amd64 (3.3.4-2+b1) ... Setting up libpcrecpp0v5:amd64 (2:8.39-2) ... Setting up libpcre32-3:amd64 (2:8.39-2) ... Setting up libpcre16-3:amd64 (2:8.39-2) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.5.0-1) ... Setting up libnuma-dev:amd64 (2.0.11-1) ... Setting up ocl-icd-libopencl1:amd64 (2.2.9-1) ... Setting up bsdmainutils (9.0.10) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libnl-3-200:amd64 (3.2.27-1) ... Setting up libfftw3-long3:amd64 (3.3.4-2+b1) ... Setting up libglib2.0-bin (2.48.1-3) ... Setting up hdf5-helpers (1.8.16+docs-8) ... Setting up diffstat (1.61-1) ... Setting up autopoint (0.19.8.1-1) ... Setting up libmpdec2:amd64 (2.4.2-1) ... Setting up libreadline6:amd64 (6.3-8+b4) ... Setting up gcc-5-base:amd64 (5.4.1-1) ... Setting up libllvm3.6v5:amd64 (1:3.6.2-3) ... 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Setting up libhwloc-plugins (1.11.3-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libjpeg-dev (1:1.5.0-1) ... Setting up libgcc-5-dev:amd64 (5.4.1-1) ... Setting up libfftw3-dev:amd64 (3.3.4-2+b1) ... Setting up automake (1:1.15-4) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.7.5-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpng-dev:amd64 (1.6.24-2) ... Setting up libstdc++-5-dev:amd64 (5.4.1-1) ... Setting up libobjc-5-dev:amd64 (5.4.1-1) ... Setting up libtool (2.4.6-2) ... Setting up python3.5 (3.5.2-3) ... Setting up libpython3-stdlib:amd64 (3.5.1-4) ... Setting up quilt (0.63-3) ... Setting up libibverbs1 (1.2.0-2) ... Setting up po-debconf (1.0.19) ... Setting up libhwloc-dev:amd64 (1.11.3-2) ... Setting up libopenmpi1.10 (1.10.3-3) ... Setting up libclang1-3.6:amd64 (1:3.6.2-3) ... Setting up libibverbs-dev (1.2.0-2) ... Setting up libopenmpi-dev (1.10.3-3) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up doxygen (1.8.11-3) ... Setting up mpi-default-dev (1.7) ... Setting up dh-python (2.20160818) ... Setting up python3 (3.5.1-4) ... Setting up libglib2.0-dev (2.48.1-3) ... Setting up dh-strip-nondeterminism (0.023-2) ... Setting up debhelper (9.20160814) ... Setting up dh-autoreconf (12) ... Setting up sbuild-build-depends-libgpiv-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.23-5) ... W: No sandbox user '_apt' on the system, can not drop privileges +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 3.16.0-4-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.27-6 dpkg-dev_1.18.10 g++-6_6.2.0-1 gcc-6_6.2.0-1 libc6-dev_2.23-5 libstdc++-5-dev_5.4.1-1 libstdc++-6-dev_6.2.0-1 libstdc++6_6.2.0-1 linux-libc-dev_4.7.2-1 Package versions: adduser_3.115 apt_1.3~rc2 autoconf_2.69-10 automake_1:1.15-4 autopoint_0.19.8.1-1 autotools-dev_20160430.1 base-files_9.6 base-passwd_3.5.40 bash_4.3-15 binutils_2.27-6 bsdmainutils_9.0.10 bsdutils_1:2.28.1-1 build-essential_12.2 bzip2_1.0.6-8 clang-3.8_1:3.8.1-9 coreutils_8.25-2 cpp_4:6.1.1-1 cpp-6_6.2.0-1 dash_0.5.8-2.3 debconf_1.5.59 debfoster_2.7-2.1 debhelper_9.20160814 debian-archive-keyring_2014.3 debianutils_4.8 dh-autoreconf_12 dh-python_2.20160818 dh-strip-nondeterminism_0.023-2 diffstat_1.61-1 diffutils_1:3.3-3 doxygen_1.8.11-3 dpkg_1.18.10 dpkg-dev_1.18.10 e2fslibs_1.43.1-1 e2fsprogs_1.43.1-1 eatmydata_105-3 fakeroot_1.21-1 file_1:5.28-4 findutils_4.6.0+git+20160703-2 g++_4:6.1.1-1 g++-6_6.2.0-1 gcc_4:6.1.1-1 gcc-5-base_5.4.1-1 gcc-6_6.2.0-1 gcc-6-base_6.2.0-1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gpgv_2.1.14-5 grep_2.25-6 groff-base_1.22.3-8 gzip_1.6-5 hdf5-helpers_1.8.16+docs-8 hostname_3.18 init-system-helpers_1.42 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3 libaec-dev_0.3.2-1 libaec0_0.3.2-1 libapt-pkg5.0_1.3~rc2 libarchive-zip-perl_1.59-1 libasan2_5.4.1-1 libasan3_6.2.0-1 libatomic1_6.2.0-1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.6-1 libaudit1_1:2.6.6-1 libblkid1_2.28.1-1 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libc-bin_2.23-5 libc-dev-bin_2.23-5 libc6_2.23-5 libc6-dev_2.23-5 libcap-ng0_0.7.7-3 libcc1-0_6.2.0-1 libcilkrts5_6.2.0-1 libclang-common-3.8-dev_1:3.8.1-9 libclang1-3.6_1:3.6.2-3 libclang1-3.8_1:3.8.1-9 libcomerr2_1.43.1-1 libcroco3_0.6.11-1 libdb5.3_5.3.28-12 libdebconfclient0_0.215 libdpkg-perl_1.18.10 libeatmydata1_105-3 libedit2_3.1-20150325-1+b1 libelf1_0.166-2 libexpat1_2.2.0-1 libfakeroot_1.21-1 libfdisk1_2.28.1-1 libffi6_3.2.1-4 libfftw3-bin_3.3.4-2+b1 libfftw3-dev_3.3.4-2+b1 libfftw3-double3_3.3.4-2+b1 libfftw3-long3_3.3.4-2+b1 libfftw3-quad3_3.3.4-2+b1 libfftw3-single3_3.3.4-2+b1 libfile-stripnondeterminism-perl_0.023-2 libgc1c2_1:7.4.2-8 libgcc-5-dev_5.4.1-1 libgcc-6-dev_6.2.0-1 libgcc1_1:6.2.0-1 libgcrypt20_1.7.3-1 libgdbm3_1.8.3-14 libgfortran3_6.2.0-1 libglib2.0-0_2.48.1-3 libglib2.0-bin_2.48.1-3 libglib2.0-data_2.48.1-3 libglib2.0-dev_2.48.1-3 libgmp10_2:6.1.1+dfsg-1 libgomp1_6.2.0-1 libgpg-error0_1.24-1 libgsl-dev_2.1+dfsg-2 libgsl2_2.1+dfsg-2 libhdf5-10_1.8.16+docs-8 libhdf5-cpp-11_1.8.16+docs-8 libhdf5-dev_1.8.16+docs-8 libhwloc-dev_1.11.3-2 libhwloc-plugins_1.11.3-2 libhwloc5_1.11.3-2 libibverbs-dev_1.2.0-2 libibverbs1_1.2.0-2 libicu57_57.1-3 libisl15_0.17.1-1 libitm1_6.2.0-1 libjbig0_2.1-3.1 libjpeg-dev_1:1.5.0-1 libjpeg62-turbo_1:1.5.0-1 libjpeg62-turbo-dev_1:1.5.0-1 libllvm3.6v5_1:3.6.2-3 libllvm3.8_1:3.8.1-9 liblsan0_6.2.0-1 libltdl-dev_2.4.6-2 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2 liblzma5_5.1.1alpha+20120614-2.1 libmagic-mgc_1:5.28-4 libmagic1_1:5.28-4 libmount1_2.28.1-1 libmpc3_1.0.3-1 libmpdec2_2.4.2-1 libmpfr4_3.1.4-2 libmpx0_5.4.1-1 libmpx2_6.2.0-1 libncurses5_6.0+20160625-1 libncursesw5_6.0+20160625-1 libnetpbm10_2:10.0-15.3+b1 libnl-3-200_3.2.27-1 libnl-route-3-200_3.2.27-1 libnuma-dev_2.0.11-1 libnuma1_2.0.11-1 libobjc-5-dev_5.4.1-1 libobjc-6-dev_6.2.0-1 libobjc4_6.2.0-1 libopenmpi-dev_1.10.3-3 libopenmpi1.10_1.10.3-3 libpam-modules_1.1.8-3.3 libpam-modules-bin_1.1.8-3.3 libpam-runtime_1.1.8-3.3 libpam0g_1.1.8-3.3 libpciaccess0_0.13.4-1 libpcre16-3_2:8.39-2 libpcre3_2:8.39-2 libpcre3-dev_2:8.39-2 libpcre32-3_2:8.39-2 libpcrecpp0v5_2:8.39-2 libperl5.22_5.22.2-3 libpipeline1_1.4.1-2 libpng-dev_1.6.24-2 libpng16-16_1.6.24-2 libpython3-stdlib_3.5.1-4 libpython3.5-minimal_3.5.2-3 libpython3.5-stdlib_3.5.2-3 libquadmath0_6.2.0-1 libreadline6_6.3-8+b4 libselinux1_2.5-3 libsemanage-common_2.5-1 libsemanage1_2.5-1 libsepol1_2.5-1 libsigsegv2_2.10-5 libsmartcols1_2.28.1-1 libsqlite3-0_3.14.1-1 libss2_1.43.1-1 libssl1.0.2_1.0.2h-1 libstdc++-5-dev_5.4.1-1 libstdc++-6-dev_6.2.0-1 libstdc++6_6.2.0-1 libsystemd0_231-5 libsz2_0.3.2-1 libtiff5_4.0.6-2 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1 libtool_2.4.6-2 libtsan0_6.2.0-1 libubsan0_6.2.0-1 libudev1_231-5 libunistring0_0.9.6+really0.9.3-0.1 libustr-1.0-1_1.0.4-5 libuuid1_2.28.1-1 libxml2_2.9.4+dfsg1-1+b1 linux-libc-dev_4.7.2-1 login_1:4.2-3.1 m4_1.4.17-5 make_4.1-9 man-db_2.7.5-1 mawk_1.3.3-17 mime-support_3.60 mount_2.28.1-1 mpi-default-dev_1.7 multiarch-support_2.23-5 ncurses-base_6.0+20160625-1 ncurses-bin_6.0+20160625-1 netpbm_2:10.0-15.3+b1 ocl-icd-libopencl1_2.2.9-1 openmpi-common_1.10.3-3 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.2-3 perl-base_5.22.2-3 perl-modules-5.22_5.22.2-3 pkg-config_0.29-4 po-debconf_1.0.19 python3_3.5.1-4 python3-minimal_3.5.1-4 python3.5_3.5.2-3 python3.5-minimal_3.5.2-3 quilt_0.63-3 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libgpiv-dummy_0.invalid.0 sed_4.2.2-7.1 sensible-utils_0.0.9 sysvinit-utils_2.88dsf-59.8 tar_1.29b-1 util-linux_2.28.1-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu Jan 7 21:30:23 2016 UTC using RSA key ID gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libgpiv_0.6.1-4.3.dsc dpkg-source: info: extracting libgpiv in /<> dpkg-source: info: unpacking libgpiv_0.6.1.orig.tar.gz dpkg-source: info: applying libgpiv_0.6.1-4.3.diff.gz dpkg-source: info: upstream files that have been modified: /<>/doxygen_footer.html Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-f2da9cd8-7271-41c9-bf95-016f7823f148 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package libgpiv dpkg-buildpackage: info: source version 0.6.1-4.3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Tobias Frost dpkg-source --before-build libgpiv-0.6.1 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean QUILT_PATCHES=debian/patches \ quilt --quiltrc /dev/null pop -a -R || test $? = 2 No patch removed rm -rf .pc debian/stamp-patched #================> Cleaning (after eventual unpatching). dh_testdir dh_testroot dh_clean configure-stamp* build-stamp* install-stamp* patch-stamp* \ debian/*.shlibs rm -f debian/debhelper-build-stamp rm -f debian/libgpiv3-common.substvars rm -f debian/libgpiv3-common.*.debhelper rm -rf debian/libgpiv3-common/ rm -f debian/libgpiv3.substvars rm -f debian/libgpiv3.*.debhelper rm -rf debian/libgpiv3/ rm -f debian/libgpiv3-dev.substvars rm -f debian/libgpiv3-dev.*.debhelper rm -rf debian/libgpiv3-dev/ rm -f debian/libgpiv3-dbg.substvars rm -f debian/libgpiv3-dbg.*.debhelper rm -rf debian/libgpiv3-dbg/ rm -f debian/libgpiv3-doc.substvars rm -f debian/libgpiv3-doc.*.debhelper rm -rf debian/libgpiv3-doc/ rm -f debian/libgpiv-mpi3.substvars rm -f debian/libgpiv-mpi3.*.debhelper rm -rf debian/libgpiv-mpi3/ rm -rf debian/.debhelper/ rm -f debian/*.debhelper.log rm -f debian/files rm -f -- configure-stamp\* build-stamp\* install-stamp\* patch-stamp\* debian/\*.shlibs find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) rm -rf debian/tmp debian/tmp-mpi \ debian/libgpiv3 debian/libgpiv3-dev debian/libgpiv3-dbg \ debian/libgpiv-mpi3 debian/libgpiv-mpi3-dbg \ debian/libgpiv3-doc rm -rf debian/build-doc rm -rf debian/build-serial rm -rf debian/build-mpi #================> Add here commands to clean up after the build process. [ ! -f Makefile ] || /usr/bin/make distclean test -r /usr/share/misc/config.sub && \ rm -f config.sub test -r /usr/share/misc/config.guess && \ rm -f config.guess dh_clean rm -f debian/debhelper-build-stamp rm -f debian/libgpiv3-common.substvars rm -f debian/libgpiv3-common.*.debhelper rm -rf debian/libgpiv3-common/ rm -f debian/libgpiv3.substvars rm -f debian/libgpiv3.*.debhelper rm -rf debian/libgpiv3/ rm -f debian/libgpiv3-dev.substvars rm -f debian/libgpiv3-dev.*.debhelper rm -rf debian/libgpiv3-dev/ rm -f debian/libgpiv3-dbg.substvars rm -f debian/libgpiv3-dbg.*.debhelper rm -rf debian/libgpiv3-dbg/ rm -f debian/libgpiv3-doc.substvars rm -f debian/libgpiv3-doc.*.debhelper rm -rf debian/libgpiv3-doc/ rm -f debian/libgpiv-mpi3.substvars rm -f debian/libgpiv-mpi3.*.debhelper rm -rf debian/libgpiv-mpi3/ rm -rf debian/.debhelper/ rm -f debian/*.debhelper.log rm -f debian/files find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch QUILT_PATCHES=debian/patches \ quilt --quiltrc /dev/null push -a || test $? = 2 Applying patch 03_lipng16.patch patching file include/gpiv.h patching file lib/io_png.c Applying patch 01_omp-pragma.diff patching file include/gpiv/gpiv-piv_utils.h patching file lib/imgproc_deform.c patching file lib/piv_utils.c patching file lib/valid.c Applying patch 02_hdf5.diff patching file lib/img.c patching file lib/io_hdf.c patching file lib/piv_par.c patching file lib/post_par.c patching file lib/valid_par.c Now at patch 02_hdf5.diff touch debian/stamp-patched dh_testdir cp -f /usr/share/misc/config.sub config.sub cp -f /usr/share/misc/config.guess config.guess #================> Configuring libgpiv3-doc. mkdir debian/build-doc cd debian/build-doc && \ ../../configure --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/x86_64-linux-gnu-ld checking if the linker (/usr/bin/x86_64-linux-gnu-ld) is GNU ld... yes checking for /usr/bin/x86_64-linux-gnu-ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking whether ln -s works... yes checking how to recognize dependent libraries... pass_all checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for x86_64-linux-gnu-g77... no checking for x86_64-linux-gnu-xlf... no checking for x86_64-linux-gnu-f77... no checking for x86_64-linux-gnu-frt... no checking for x86_64-linux-gnu-pgf77... no checking for x86_64-linux-gnu-cf77... no checking for x86_64-linux-gnu-fort77... no checking for x86_64-linux-gnu-fl32... no checking for x86_64-linux-gnu-af77... no checking for x86_64-linux-gnu-xlf90... no checking for x86_64-linux-gnu-f90... no checking for x86_64-linux-gnu-pgf90... no checking for x86_64-linux-gnu-pghpf... no checking for x86_64-linux-gnu-epcf90... no checking for x86_64-linux-gnu-gfortran... no checking for x86_64-linux-gnu-g95... no checking for x86_64-linux-gnu-xlf95... no checking for x86_64-linux-gnu-f95... no checking for x86_64-linux-gnu-fort... no checking for x86_64-linux-gnu-ifort... no checking for x86_64-linux-gnu-ifc... no checking for x86_64-linux-gnu-efc... no checking for x86_64-linux-gnu-pgf95... no checking for x86_64-linux-gnu-lf95... no checking for x86_64-linux-gnu-ftn... no checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... no checking for g95... no checking for xlf95... no checking for f95... no checking for fort... no checking for ifort... no checking for ifc... no checking for efc... no checking for pgf95... no checking for lf95... no checking for ftn... no checking whether we are using the GNU Fortran 77 compiler... no checking whether accepts -g... no checking the maximum length of command line arguments... 1572864 checking command to parse /usr/bin/nm -B output from x86_64-linux-gnu-gcc object... ok checking for objdir... .libs checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... yes checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/x86_64-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by x86_64-linux-gnu-g++... /usr/bin/x86_64-linux-gnu-ld -m elf_x86_64 checking if the linker (/usr/bin/x86_64-linux-gnu-ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/x86_64-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/x86_64-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so (cached) (cached) checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking for ANSI C header files... (cached) yes checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for gawk... no checking for mawk... mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for x86_64-linux-gnu-dot... no checking for dot... no configure: WARNING: dot not found - will not generate graphics for doxygen documentation checking for a BSD-compatible install... /usr/bin/install -c checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking dependency style of x86_64-linux-gnu-gcc... gcc3 checking dependency style of x86_64-linux-gnu-g++... gcc3 checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for GLIB... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... no configure: error: "libgomp not installed" debian/rules:40: recipe for target 'configure-stamp-doc' failed make: *** [configure-stamp-doc] Error 1 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 2016-08-29T16:36:48Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 0 Build-Time: 5 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 120 Job: libgpiv_0.6.1-4.3 Machine Architecture: amd64 Package: libgpiv Package-Time: 230 Source-Version: 0.6.1-4.3 Space: 0 Status: failed Version: 0.6.1-4.3 -------------------------------------------------------------------------------- Finished at 2016-08-29T16:36:48Z Build needed 00:00:00, 0k disc space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 230.764745737s DC-Time-Estimation: 230.764745737 versus expected 425 (r/m: 0.8417024604112092 ; m: 230.764745737)