DC-Build-Header: librcsb-core-wrapper 1.005-4 / 2016-08-29 16:48:45 +0000 DC-Task: type:rebuild-binarch-only source:librcsb-core-wrapper version:1.005-4 chroot:unstable esttime:291 logfile:/tmp/librcsb-core-wrapper_1.005-4_unstable_clang3.8.log modes:clang:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang librcsb-core-wrapper_1.005-4' sbuild (Debian sbuild) 0.70.0 (03 Aug 2016) on ip-172-31-7-152.eu-central-1.compute.internal +==============================================================================+ | librcsb-core-wrapper 1.005-4 (amd64) Mon, 29 Aug 2016 16:48:45 +0000 | +==============================================================================+ Package: librcsb-core-wrapper Version: 1.005-4 Source Version: 1.005-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/unstable-amd64-sbuild-7bbb34c2-753e-40e3-9361-b3a8824910da' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang ---------- + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=3.8 + echo 'Install of clang-3.8' Install of clang-3.8 + apt-get update Get:1 http://127.0.0.1:9999/debian unstable InRelease [209 kB] Get:2 http://127.0.0.1:9999/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Translation-en [5451 kB] Get:5 http://127.0.0.1:9999/debian unstable/main Sources 2016-08-29-0319.00.pdiff [16.7 kB] Get:6 http://127.0.0.1:9999/debian unstable/main Sources 2016-08-29-0916.07.pdiff [5442 B] Get:6 http://127.0.0.1:9999/debian unstable/main Sources 2016-08-29-0916.07.pdiff [5442 B] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2016-08-29-0319.00.pdiff [13.2 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2016-08-29-0916.07.pdiff [3300 B] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2016-08-29-0916.07.pdiff [3300 B] Fetched 5755 kB in 2s (1938 kB/s) Reading package lists... W: No sandbox user '_apt' on the system, can not drop privileges + apt-get install --yes --no-install-recommends --force-yes clang-3.8 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libbsd0 libclang-common-3.8-dev libclang1-3.8 libedit2 libffi6 libllvm3.8 libobjc-6-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-3.8-doc Recommended packages: llvm-3.8-dev python The following NEW packages will be installed: clang-3.8 libbsd0 libclang-common-3.8-dev libclang1-3.8 libedit2 libffi6 libllvm3.8 libobjc-6-dev libobjc4 0 upgraded, 9 newly installed, 0 to remove and 1 not upgraded. Need to get 38.3 MB of archives. After this operation, 162 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.3-1 [83.0 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20150325-1+b1 [85.2 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libffi6 amd64 3.2.1-4 [20.4 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libllvm3.8 amd64 1:3.8.1-9 [10.3 MB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 6.2.0-1 [110 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-6-dev amd64 6.2.0-1 [394 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-3.8 amd64 1:3.8.1-9 [4188 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-3.8-dev amd64 1:3.8.1-9 [1477 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 clang-3.8 amd64 1:3.8.1-9 [21.6 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 38.3 MB in 8s (4369 kB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9446 files and directories currently installed.) Preparing to unpack .../0-libbsd0_0.8.3-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.3-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../1-libedit2_3.1-20150325-1+b1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20150325-1+b1) ... Selecting previously unselected package libffi6:amd64. Preparing to unpack .../2-libffi6_3.2.1-4_amd64.deb ... Unpacking libffi6:amd64 (3.2.1-4) ... Selecting previously unselected package libllvm3.8:amd64. Preparing to unpack .../3-libllvm3.8_1%3a3.8.1-9_amd64.deb ... Unpacking libllvm3.8:amd64 (1:3.8.1-9) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../4-libobjc4_6.2.0-1_amd64.deb ... Unpacking libobjc4:amd64 (6.2.0-1) ... Selecting previously unselected package libobjc-6-dev:amd64. Preparing to unpack .../5-libobjc-6-dev_6.2.0-1_amd64.deb ... Unpacking libobjc-6-dev:amd64 (6.2.0-1) ... Selecting previously unselected package libclang1-3.8:amd64. Preparing to unpack .../6-libclang1-3.8_1%3a3.8.1-9_amd64.deb ... Unpacking libclang1-3.8:amd64 (1:3.8.1-9) ... Selecting previously unselected package libclang-common-3.8-dev. Preparing to unpack .../7-libclang-common-3.8-dev_1%3a3.8.1-9_amd64.deb ... Unpacking libclang-common-3.8-dev (1:3.8.1-9) ... Selecting previously unselected package clang-3.8. Preparing to unpack .../8-clang-3.8_1%3a3.8.1-9_amd64.deb ... Unpacking clang-3.8 (1:3.8.1-9) ... Setting up libobjc4:amd64 (6.2.0-1) ... Setting up libbsd0:amd64 (0.8.3-1) ... Processing triggers for libc-bin (2.23-5) ... Setting up libobjc-6-dev:amd64 (6.2.0-1) ... Setting up libffi6:amd64 (3.2.1-4) ... Setting up libedit2:amd64 (3.1-20150325-1+b1) ... Setting up libllvm3.8:amd64 (1:3.8.1-9) ... Setting up libclang-common-3.8-dev (1:3.8.1-9) ... Setting up libclang1-3.8:amd64 (1:3.8.1-9) ... Setting up clang-3.8 (1:3.8.1-9) ... Processing triggers for libc-bin (2.23-5) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. W: No sandbox user '_apt' on the system, can not drop privileges + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6' + cd /usr/bin + for VERSION in '$VERSIONS' + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-3.8 g++-4.6 + ln -s clang-3.8 gcc-4.6 + ln -s clang-3.8 cpp-4.6 + ln -s clang-3.8 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-3.8 g++-4.7 + ln -s clang-3.8 gcc-4.7 + ln -s clang-3.8 cpp-4.7 + ln -s clang-3.8 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-3.8 g++-4.8 + ln -s clang-3.8 gcc-4.8 + ln -s clang-3.8 cpp-4.8 + ln -s clang-3.8 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-3.8 g++-4.9 + ln -s clang-3.8 gcc-4.9 + ln -s clang-3.8 cpp-4.9 + ln -s clang-3.8 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method + for VERSION in '$VERSIONS' + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-3.8 g++-5 + ln -s clang-3.8 gcc-5 + ln -s clang-3.8 cpp-5 + ln -s clang-3.8 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in '$VERSIONS' + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-3.8 g++-6 + ln -s clang-3.8 gcc-6 + ln -s clang-3.8 cpp-6 + ln -s clang-3.8 gcc + echo 'gcc-6 hold' + dpkg --set-selections + echo 'g++-6 hold' + dpkg --set-selections + cd - /build/librcsb-core-wrapper-QTxtpp + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... W: No sandbox user '_apt' on the system, can not drop privileges Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: linux-libc-dev 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1158 kB of archives. After this operation, 60.4 kB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 linux-libc-dev amd64 4.7.2-1 [1158 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1158 kB in 0s (70.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9769 files and directories currently installed.) Preparing to unpack .../linux-libc-dev_4.7.2-1_amd64.deb ... Unpacking linux-libc-dev:amd64 (4.7.2-1) over (4.6.4-1) ... Setting up linux-libc-dev:amd64 (4.7.2-1) ... W: No sandbox user '_apt' on the system, can not drop privileges +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'librcsb-core-wrapper' packaging is maintained in the 'Svn' version control system at: svn://anonscm.debian.org/debian-med/trunk/packages/rcsb-core-wrapper/trunk Need to get 1857 kB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main librcsb-core-wrapper 1.005-4 (dsc) [2630 B] Get:2 http://127.0.0.1:9999/debian unstable/main librcsb-core-wrapper 1.005-4 (tar) [1835 kB] Get:3 http://127.0.0.1:9999/debian unstable/main librcsb-core-wrapper 1.005-4 (diff) [19.3 kB] Fetched 1857 kB in 0s (9131 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/librcsb-core-wrapper-QTxtpp/librcsb-core-wrapper-1.005' with '<>' I: NOTICE: Log filtering will replace 'build/librcsb-core-wrapper-QTxtpp' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-Yc3pZn/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-Yc3pZn/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Yc3pZn/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-Yc3pZn/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Yc3pZn/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-Yc3pZn/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (0 B/s) Reading package lists... W: No sandbox user '_apt' on the system, can not drop privileges Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 774 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-Yc3pZn/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [774 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 774 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 9775 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... W: No sandbox user '_apt' on the system, can not drop privileges +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 9), doxygen, graphviz, libboost-python-dev, libxerces-c-dev, python-all-dev, python-all-dbg, libtool, libtool-bin, bison, flex Filtered Build-Depends: debhelper (>= 9), doxygen, graphviz, libboost-python-dev, libxerces-c-dev, python-all-dev, python-all-dbg, libtool, libtool-bin, bison, flex dpkg-deb: building package 'sbuild-build-depends-librcsb-core-wrapper-dummy' in '/<>/resolver-SMob1s/apt_archive/sbuild-build-depends-librcsb-core-wrapper-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-librcsb-core-wrapper-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-SMob1s/apt_archive ./ InRelease Get:2 copy:/<>/resolver-SMob1s/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-SMob1s/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-SMob1s/apt_archive ./ Sources [416 B] Get:5 copy:/<>/resolver-SMob1s/apt_archive ./ Packages [504 B] Fetched 1877 B in 0s (0 B/s) Reading package lists... W: No sandbox user '_apt' on the system, can not drop privileges Reading package lists... Install librcsb-core-wrapper build dependencies (apt-based resolver) -------------------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism doxygen file flex fontconfig fontconfig-config fonts-dejavu-core gcc-5-base gettext gettext-base graphviz groff-base icu-devtools intltool-debian libarchive-zip-perl libasan2 libbison-dev libboost-python-dev libboost-python1.61-dev libboost-python1.61.0 libboost1.61-dev libcairo2 libcdt5 libcgraph6 libclang1-3.6 libcroco3 libdatrie1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfl-dev libfontconfig1 libfreetype6 libgcc-5-dev libgd3 libglib2.0-0 libgraphite2-3 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu-dev libicu57 libjbig0 libjpeg62-turbo libllvm3.6v5 libltdl7 libmagic-mgc libmagic1 libmpdec2 libmpx0 libobjc-5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libpython-all-dbg libpython-all-dev libpython-dbg libpython-dev libpython-stdlib libpython2.7 libpython2.7-dbg libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.5 libpython3.5-dev libpython3.5-minimal libpython3.5-stdlib libreadline6 libsigsegv2 libsm6 libsqlite3-0 libssl1.0.2 libstdc++-5-dev libthai-data libthai0 libtiff5 libtimedate-perl libtool libtool-bin libunistring0 libwebp6 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxdot4 libxerces-c-dev libxerces-c3.1 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 lsb-base m4 man-db mime-support po-debconf python python-all python-all-dbg python-all-dev python-dbg python-dev python-minimal python2.7 python2.7-dbg python2.7-dev python2.7-minimal python3 python3-dev python3-minimal python3.5 python3.5-dev python3.5-minimal readline-common ucf x11-common Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff libboost1.61-doc gccxml libboost-atomic1.61-dev libboost-chrono1.61-dev libboost-context1.61-dev libboost-coroutine1.61-dev libboost-date-time1.61-dev libboost-exception1.61-dev libboost-filesystem1.61-dev libboost-graph1.61-dev libboost-graph-parallel1.61-dev libboost-iostreams1.61-dev libboost-locale1.61-dev libboost-log1.61-dev libboost-math1.61-dev libboost-mpi1.61-dev libboost-mpi-python1.61-dev libboost-program-options1.61-dev libboost-random1.61-dev libboost-regex1.61-dev libboost-serialization1.61-dev libboost-signals1.61-dev libboost-system1.61-dev libboost-test1.61-dev libboost-thread1.61-dev libboost-timer1.61-dev libboost-wave1.61-dev libboost1.61-tools-dev libmpfrc++-dev libntl-dev libgd-tools icu-doc python2.7-gdbm-dbg python2.7-tk-dbg libstdc++-5-doc libtool-doc gfortran | fortran95-compiler gcj-jdk libxerces-c-doc less www-browser libmail-box-perl python-doc python-tk python2.7-doc python-gdbm-dbg python-tk-dbg binfmt-support python3-doc python3-tk python3-venv python3.5-venv python3.5-doc readline-doc Recommended packages: curl | wget | lynx-cur fonts-liberation libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin libltdl-dev xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism doxygen file flex fontconfig fontconfig-config fonts-dejavu-core gcc-5-base gettext gettext-base graphviz groff-base icu-devtools intltool-debian libarchive-zip-perl libasan2 libbison-dev libboost-python-dev libboost-python1.61-dev libboost-python1.61.0 libboost1.61-dev libcairo2 libcdt5 libcgraph6 libclang1-3.6 libcroco3 libdatrie1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfl-dev libfontconfig1 libfreetype6 libgcc-5-dev libgd3 libglib2.0-0 libgraphite2-3 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu-dev libicu57 libjbig0 libjpeg62-turbo libllvm3.6v5 libltdl7 libmagic-mgc libmagic1 libmpdec2 libmpx0 libobjc-5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libpython-all-dbg libpython-all-dev libpython-dbg libpython-dev libpython-stdlib libpython2.7 libpython2.7-dbg libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.5 libpython3.5-dev libpython3.5-minimal libpython3.5-stdlib libreadline6 libsigsegv2 libsm6 libsqlite3-0 libssl1.0.2 libstdc++-5-dev libthai-data libthai0 libtiff5 libtimedate-perl libtool libtool-bin libunistring0 libwebp6 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxdot4 libxerces-c-dev libxerces-c3.1 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 lsb-base m4 man-db mime-support po-debconf python python-all python-all-dbg python-all-dev python-dbg python-dev python-minimal python2.7 python2.7-dbg python2.7-dev python2.7-minimal python3 python3-dev python3-minimal python3.5 python3.5-dev python3.5-minimal readline-common sbuild-build-depends-librcsb-core-wrapper-dummy ucf x11-common 0 upgraded, 142 newly installed, 0 to remove and 0 not upgraded. Need to get 171 MB of archives. After this operation, 619 MB of additional disk space will be used. Get:1 copy:/<>/resolver-SMob1s/apt_archive ./ sbuild-build-depends-librcsb-core-wrapper-dummy 0.invalid.0 [848 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-8 [1162 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 9.0.10 [184 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.4.1-2 [27.6 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.7.5-1 [1003 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-minimal amd64 2.7.12-2 [387 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-minimal amd64 2.7.12-2 [1348 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 python-minimal amd64 2.7.11-2 [40.3 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 mime-support all 3.60 [36.7 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.0-1 [82.0 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 6.3-8 [57.7 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libreadline6 amd64 6.3-8+b4 [142 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.14.1-1 [559 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.0.2 amd64 1.0.2h-1 [1287 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-stdlib amd64 2.7.12-2 [1875 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 python2.7 amd64 2.7.12-2 [277 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 libpython-stdlib amd64 2.7.11-2 [19.8 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 python amd64 2.7.11-2 [153 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.10-5 [28.9 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.17-5 [255 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 libfl-dev amd64 2.6.1-1 [92.5 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 flex amd64 2.6.1-1 [428 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 libpng16-16 amd64 1.6.24-2 [279 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 libfreetype6 amd64 2.6.3-3+b1 [437 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 ucf all 3.0036 [70.2 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig-config all 2.11.0-6.7 [271 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 libfontconfig1 amd64 2.11.0-6.7 [331 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig amd64 2.11.0-6.7 [403 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.48.1-3 [2707 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-1.2 [158 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 lsb-base all 9.20160629 [27.6 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 x11-common all 1:7.7+16 [251 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 libice6 amd64 2:1.0.9-1+b1 [58.8 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 libsm6 amd64 2:1.2.2-1+b1 [33.6 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1 [20.7 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-1.1 [26.2 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 libxcb1 amd64 1.11.1-1.1 [45.3 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 libx11-data all 2:1.6.3-1 [128 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 libx11-6 amd64 2:1.6.3-1 [742 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1 [52.7 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 libxpm4 amd64 1:3.5.11-1+b1 [48.1 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-minimal amd64 3.5.2-3 [568 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 python3.5-minimal amd64 3.5.2-3 [1644 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 python3-minimal amd64 3.5.1-4 [35.3 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 libmpdec2 amd64 2.4.2-1 [85.2 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-stdlib amd64 3.5.2-3 [2126 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 python3.5 amd64 3.5.2-3 [214 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 libpython3-stdlib amd64 3.5.1-4 [18.6 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 dh-python all 2.20160818 [83.0 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 python3 amd64 3.5.1-4 [21.6 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 libjbig0 amd64 2.1-3.1 [30.7 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 gcc-5-base amd64 5.4.1-1 [173 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.28-4 [210 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.28-4 [109 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.28-4 [62.9 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-1 [121 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-3 [7676 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-1+b1 [919 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-10 [338 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20160430.1 [72.6 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15-4 [735 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-1 [433 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 libbison-dev amd64 2:3.0.4.dfsg-1 [432 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 bison amd64 2:3.0.4.dfsg-1 [780 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.11-1 [143 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 libunistring0 amd64 0.9.6+really0.9.3-0.1 [279 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-1 [1493 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.19 [249 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.59-1 [95.5 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.023-2 [13.4 kB] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.023-2 [8202 B] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2 [545 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 12 [15.8 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 9.20160814 [800 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 libllvm3.6v5 amd64 1:3.6.2-3 [8010 kB] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 libasan2 amd64 5.4.1-1 [261 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 libmpx0 amd64 5.4.1-1 [9410 B] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 libgcc-5-dev amd64 5.4.1-1 [2214 kB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 libstdc++-5-dev amd64 5.4.1-1 [1417 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-5-dev amd64 5.4.1-1 [373 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-3.6 amd64 1:3.6.2-3 [3664 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 doxygen amd64 1.8.11-3 [3773 kB] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libcdt5 amd64 2.38.0-15 [59.4 kB] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 libcgraph6 amd64 2.38.0-15 [82.0 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.0-1 [132 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5 amd64 4.0.6-2 [222 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libwebp6 amd64 0.5.1-2 [235 kB] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 libgd3 amd64 2.2.3-3+b1 [136 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 libpixman-1-0 amd64 0.33.6-1 [532 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-render0 amd64 1.11.1-1.1 [17.5 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-shm0 amd64 1.11.1-1.1 [11.6 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 libxrender1 amd64 1:0.9.9-2 [31.8 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 libcairo2 amd64 1.14.6-1+b1 [767 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 libltdl7 amd64 2.4.6-2 [389 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 libthai-data all 0.1.25-1 [165 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 libdatrie1 amd64 0.2.10-2 [35.8 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 libthai0 amd64 0.1.25-1 [51.6 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 libpango-1.0-0 amd64 1.40.1-1 [311 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 libgraphite2-3 amd64 1.3.8-1 [76.4 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 libharfbuzz0b amd64 1.2.7-1+b1 [612 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.40.1-1 [236 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.40.1-1 [223 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 libpathplan4 amd64 2.38.0-15 [62.6 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 libxdot4 amd64 2.38.0-15 [55.4 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 libgvc6 amd64 2.38.0-15 [637 kB] Get:109 http://127.0.0.1:9999/debian unstable/main amd64 libgvpr2 amd64 2.38.0-15 [210 kB] Get:110 http://127.0.0.1:9999/debian unstable/main amd64 libxt6 amd64 1:1.1.5-1 [188 kB] Get:111 http://127.0.0.1:9999/debian unstable/main amd64 libxmu6 amd64 2:1.1.2-2 [60.3 kB] Get:112 http://127.0.0.1:9999/debian unstable/main amd64 libxaw7 amd64 2:1.0.13-1 [200 kB] Get:113 http://127.0.0.1:9999/debian unstable/main amd64 graphviz amd64 2.38.0-15 [733 kB] Get:114 http://127.0.0.1:9999/debian unstable/main amd64 icu-devtools amd64 57.1-3 [172 kB] Get:115 http://127.0.0.1:9999/debian unstable/main amd64 libboost1.61-dev amd64 1.61.0+dfsg-2.1 [6843 kB] Get:116 http://127.0.0.1:9999/debian unstable/main amd64 libboost-python1.61.0 amd64 1.61.0+dfsg-2.1 [137 kB] Get:117 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7 amd64 2.7.12-2 [1070 kB] Get:118 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1-dev amd64 2.2.0-1 [128 kB] Get:119 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-dev amd64 2.7.12-2 [28.1 MB] Get:120 http://127.0.0.1:9999/debian unstable/main amd64 libpython-dev amd64 2.7.11-2 [19.8 kB] Get:121 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-dev amd64 2.7.12-2 [281 kB] Get:122 http://127.0.0.1:9999/debian unstable/main amd64 python-dev amd64 2.7.11-2 [1128 B] Get:123 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5 amd64 3.5.2-3 [1368 kB] Get:124 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-dev amd64 3.5.2-3 [37.6 MB] Get:125 http://127.0.0.1:9999/debian unstable/main amd64 libpython3-dev amd64 3.5.1-4 [18.7 kB] Get:126 http://127.0.0.1:9999/debian unstable/main amd64 python3.5-dev amd64 3.5.2-3 [413 kB] Get:127 http://127.0.0.1:9999/debian unstable/main amd64 python3-dev amd64 3.5.1-4 [1152 B] Get:128 http://127.0.0.1:9999/debian unstable/main amd64 libboost-python1.61-dev amd64 1.61.0+dfsg-2.1 [163 kB] Get:129 http://127.0.0.1:9999/debian unstable/main amd64 libboost-python-dev amd64 1.61.0.2 [3776 B] Get:130 http://127.0.0.1:9999/debian unstable/main amd64 libicu-dev amd64 57.1-3 [16.3 MB] Get:131 http://127.0.0.1:9999/debian unstable/main amd64 libpython-all-dev amd64 2.7.11-2 [952 B] Get:132 http://127.0.0.1:9999/debian unstable/main amd64 libtool-bin amd64 2.4.6-2 [430 kB] Get:133 http://127.0.0.1:9999/debian unstable/main amd64 libxerces-c3.1 amd64 3.1.3+debian-2.1+b1 [851 kB] Get:134 http://127.0.0.1:9999/debian unstable/main amd64 libxerces-c-dev amd64 3.1.3+debian-2.1+b1 [1619 kB] Get:135 http://127.0.0.1:9999/debian unstable/main amd64 python-all amd64 2.7.11-2 [938 B] Get:136 http://127.0.0.1:9999/debian unstable/main amd64 python-all-dev amd64 2.7.11-2 [954 B] Get:137 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-dbg amd64 2.7.12-2 [4654 kB] Get:138 http://127.0.0.1:9999/debian unstable/main amd64 libpython-dbg amd64 2.7.11-2 [19.8 kB] Get:139 http://127.0.0.1:9999/debian unstable/main amd64 libpython-all-dbg amd64 2.7.11-2 [1074 B] Get:140 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-dbg amd64 2.7.12-2 [7789 kB] Get:141 http://127.0.0.1:9999/debian unstable/main amd64 python-dbg amd64 2.7.11-2 [1204 B] Get:142 http://127.0.0.1:9999/debian unstable/main amd64 python-all-dbg amd64 2.7.11-2 [956 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 171 MB in 21s (8008 kB/s) Selecting previously unselected package groff-base. (Reading database ... 9775 files and directories currently installed.) Preparing to unpack .../00-groff-base_1.22.3-8_amd64.deb ... Unpacking groff-base (1.22.3-8) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_9.0.10_amd64.deb ... Unpacking bsdmainutils (9.0.10) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../02-libpipeline1_1.4.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.4.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../03-man-db_2.7.5-1_amd64.deb ... Unpacking man-db (2.7.5-1) ... Selecting previously unselected package libpython2.7-minimal:amd64. Preparing to unpack .../04-libpython2.7-minimal_2.7.12-2_amd64.deb ... Unpacking libpython2.7-minimal:amd64 (2.7.12-2) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../05-python2.7-minimal_2.7.12-2_amd64.deb ... Unpacking python2.7-minimal (2.7.12-2) ... Selecting previously unselected package python-minimal. Preparing to unpack .../06-python-minimal_2.7.11-2_amd64.deb ... Unpacking python-minimal (2.7.11-2) ... Selecting previously unselected package mime-support. Preparing to unpack .../07-mime-support_3.60_all.deb ... Unpacking mime-support (3.60) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../08-libexpat1_2.2.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.0-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../09-readline-common_6.3-8_all.deb ... Unpacking readline-common (6.3-8) ... Selecting previously unselected package libreadline6:amd64. Preparing to unpack .../10-libreadline6_6.3-8+b4_amd64.deb ... Unpacking libreadline6:amd64 (6.3-8+b4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../11-libsqlite3-0_3.14.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.14.1-1) ... Selecting previously unselected package libssl1.0.2:amd64. Preparing to unpack .../12-libssl1.0.2_1.0.2h-1_amd64.deb ... Unpacking libssl1.0.2:amd64 (1.0.2h-1) ... Selecting previously unselected package libpython2.7-stdlib:amd64. Preparing to unpack .../13-libpython2.7-stdlib_2.7.12-2_amd64.deb ... Unpacking libpython2.7-stdlib:amd64 (2.7.12-2) ... Selecting previously unselected package python2.7. Preparing to unpack .../14-python2.7_2.7.12-2_amd64.deb ... Unpacking python2.7 (2.7.12-2) ... Selecting previously unselected package libpython-stdlib:amd64. Preparing to unpack .../15-libpython-stdlib_2.7.11-2_amd64.deb ... Unpacking libpython-stdlib:amd64 (2.7.11-2) ... Setting up libpython2.7-minimal:amd64 (2.7.12-2) ... Setting up python2.7-minimal (2.7.12-2) ... Setting up python-minimal (2.7.11-2) ... Selecting previously unselected package python. (Reading database ... 11156 files and directories currently installed.) Preparing to unpack .../00-python_2.7.11-2_amd64.deb ... 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Selecting previously unselected package sbuild-build-depends-librcsb-core-wrapper-dummy. Preparing to unpack .../92-sbuild-build-depends-librcsb-core-wrapper-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-librcsb-core-wrapper-dummy (0.invalid.0) ... Setting up readline-common (6.3-8) ... Setting up libpathplan4 (2.38.0-15) ... Setting up libxdot4 (2.38.0-15) ... Setting up libjpeg62-turbo:amd64 (1:1.5.0-1) ... Setting up libarchive-zip-perl (1.59-1) ... Setting up mime-support (3.60) ... Setting up libpng16-16:amd64 (1.6.24-2) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libjbig0:amd64 (2.1-3.1) ... Setting up libsigsegv2:amd64 (2.10-5) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up groff-base (1.22.3-8) ... Setting up libglib2.0-0:amd64 (2.48.1-3) ... No schema files found: doing nothing. Setting up libboost-python1.61.0 (1.61.0+dfsg-2.1) ... Setting up libdatrie1:amd64 (0.2.10-2) ... Setting up libtiff5:amd64 (4.0.6-2) ... Setting up gettext-base (0.19.8.1-1) ... Setting up libpipeline1:amd64 (1.4.1-2) ... Setting up m4 (1.4.17-5) ... Setting up libicu57:amd64 (57.1-3) ... Setting up libboost1.61-dev:amd64 (1.61.0+dfsg-2.1) ... Setting up ucf (3.0036) ... Setting up libxml2:amd64 (2.9.4+dfsg1-1+b1) ... Setting up libfreetype6:amd64 (2.6.3-3+b1) ... Setting up libmagic-mgc (1:5.28-4) ... Setting up libfl-dev:amd64 (2.6.1-1) ... Setting up libmagic1:amd64 (1:5.28-4) ... Setting up lsb-base (9.20160629) ... Setting up libgraphite2-3:amd64 (1.3.8-1) ... Setting up libcroco3:amd64 (0.6.11-1) ... Setting up libpixman-1-0:amd64 (0.33.6-1) ... Processing triggers for libc-bin (2.23-5) ... Setting up autotools-dev (20160430.1) ... Setting up libunistring0:amd64 (0.9.6+really0.9.3-0.1) ... Setting up libltdl7:amd64 (2.4.6-2) ... Setting up libsqlite3-0:amd64 (3.14.1-1) ... Setting up libbison-dev:amd64 (2:3.0.4.dfsg-1) ... Setting up libexpat1-dev:amd64 (2.2.0-1) ... Setting up icu-devtools (57.1-3) ... Setting up libthai-data (0.1.25-1) ... Setting up bison (2:3.0.4.dfsg-1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up libxdmcp6:amd64 (1:1.1.2-1.1) ... Setting up bsdmainutils (9.0.10) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up x11-common (1:7.7+16) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libcdt5 (2.38.0-15) ... Setting up libx11-data (2:1.6.3-1) ... Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-1) ... Setting up libmpdec2:amd64 (2.4.2-1) ... Setting up libreadline6:amd64 (6.3-8+b4) ... Setting up gcc-5-base:amd64 (5.4.1-1) ... Setting up libllvm3.6v5:amd64 (1:3.6.2-3) ... Setting up libcgraph6 (2.38.0-15) ... Setting up libwebp6:amd64 (0.5.1-2) ... Setting up libfile-stripnondeterminism-perl (0.023-2) ... Setting up libgts-0.7-5:amd64 (0.7.6+darcs121130-1.2) ... Setting up libxerces-c3.1:amd64 (3.1.3+debian-2.1+b1) ... Setting up fontconfig-config (2.11.0-6.7) ... Setting up libmpx0:amd64 (5.4.1-1) ... Setting up gettext (0.19.8.1-1) ... Setting up flex (2.6.1-1) ... Setting up libgvpr2 (2.38.0-15) ... Setting up libpython3.5-stdlib:amd64 (3.5.2-3) ... Setting up libasan2:amd64 (5.4.1-1) ... Setting up libharfbuzz0b:amd64 (1.2.7-1+b1) ... Setting up autoconf (2.69-10) ... Setting up libthai0:amd64 (0.1.25-1) ... Setting up libicu-dev (57.1-3) ... Setting up file (1:5.28-4) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libgcc-5-dev:amd64 (5.4.1-1) ... Setting up automake (1:1.15-4) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libice6:amd64 (2:1.0.9-1+b1) ... Setting up man-db (2.7.5-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxcb1:amd64 (1.11.1-1.1) ... Setting up libpython2.7-stdlib:amd64 (2.7.12-2) ... Setting up libstdc++-5-dev:amd64 (5.4.1-1) ... Setting up libobjc-5-dev:amd64 (5.4.1-1) ... Setting up libtool (2.4.6-2) ... Setting up python3.5 (3.5.2-3) ... Setting up libpython3-stdlib:amd64 (3.5.1-4) ... Setting up libtool-bin (2.4.6-2) ... Setting up libfontconfig1:amd64 (2.11.0-6.7) ... Setting up libsm6:amd64 (2:1.2.2-1+b1) ... Setting up libxerces-c-dev (3.1.3+debian-2.1+b1) ... Setting up libxcb-render0:amd64 (1.11.1-1.1) ... Setting up po-debconf (1.0.19) ... Setting up libpython3.5:amd64 (3.5.2-3) ... Setting up libx11-6:amd64 (2:1.6.3-1) ... Setting up python2.7 (2.7.12-2) ... Setting up libpython2.7-dbg:amd64 (2.7.12-2) ... Setting up libpython3.5-dev:amd64 (3.5.2-3) ... Setting up libpython-stdlib:amd64 (2.7.11-2) ... Setting up libclang1-3.6:amd64 (1:3.6.2-3) ... Setting up python2.7-dbg (2.7.12-2) ... Setting up libpython2.7:amd64 (2.7.12-2) ... Setting up libxcb-shm0:amd64 (1.11.1-1.1) ... Setting up libxpm4:amd64 (1:3.5.11-1+b1) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libxrender1:amd64 (1:0.9.9-2) ... Setting up libpython-dbg:amd64 (2.7.11-2) ... Setting up libpython2.7-dev:amd64 (2.7.12-2) ... Setting up python3.5-dev (3.5.2-3) ... Setting up python2.7-dev (2.7.12-2) ... Setting up libpython-all-dbg:amd64 (2.7.11-2) ... Setting up python (2.7.11-2) ... Setting up fontconfig (2.11.0-6.7) ... Regenerating fonts cache... done. Setting up libpython3-dev:amd64 (3.5.1-4) ... Setting up libpython-dev:amd64 (2.7.11-2) ... Setting up libxext6:amd64 (2:1.3.3-1) ... Setting up python-dev (2.7.11-2) ... Setting up libpython-all-dev:amd64 (2.7.11-2) ... Setting up doxygen (1.8.11-3) ... Setting up libgd3:amd64 (2.2.3-3+b1) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up libpango-1.0-0:amd64 (1.40.1-1) ... Setting up python-dbg (2.7.11-2) ... Setting up python-all (2.7.11-2) ... Setting up libxaw7:amd64 (2:1.0.13-1) ... Setting up libcairo2:amd64 (1.14.6-1+b1) ... Setting up python-all-dbg (2.7.11-2) ... Setting up libpangoft2-1.0-0:amd64 (1.40.1-1) ... Setting up python-all-dev (2.7.11-2) ... Setting up libpangocairo-1.0-0:amd64 (1.40.1-1) ... Setting up libgvc6 (2.38.0-15) ... Setting up graphviz (2.38.0-15) ... Setting up python3 (3.5.1-4) ... Setting up python3-dev (3.5.1-4) ... Setting up dh-strip-nondeterminism (0.023-2) ... Setting up dh-python (2.20160818) ... Setting up dh-autoreconf (12) ... Setting up libboost-python1.61-dev (1.61.0+dfsg-2.1) ... Setting up libboost-python-dev (1.61.0.2) ... Setting up debhelper (9.20160814) ... Setting up sbuild-build-depends-librcsb-core-wrapper-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.23-5) ... W: No sandbox user '_apt' on the system, can not drop privileges +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 3.16.0-4-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.27-6 dpkg-dev_1.18.10 g++-6_6.2.0-1 gcc-6_6.2.0-1 libc6-dev_2.23-5 libstdc++-5-dev_5.4.1-1 libstdc++-6-dev_6.2.0-1 libstdc++6_6.2.0-1 linux-libc-dev_4.7.2-1 Package versions: adduser_3.115 apt_1.3~rc2 autoconf_2.69-10 automake_1:1.15-4 autopoint_0.19.8.1-1 autotools-dev_20160430.1 base-files_9.6 base-passwd_3.5.40 bash_4.3-15 binutils_2.27-6 bison_2:3.0.4.dfsg-1 bsdmainutils_9.0.10 bsdutils_1:2.28.1-1 build-essential_12.2 bzip2_1.0.6-8 clang-3.8_1:3.8.1-9 coreutils_8.25-2 cpp_4:6.1.1-1 cpp-6_6.2.0-1 dash_0.5.8-2.3 debconf_1.5.59 debfoster_2.7-2.1 debhelper_9.20160814 debian-archive-keyring_2014.3 debianutils_4.8 dh-autoreconf_12 dh-python_2.20160818 dh-strip-nondeterminism_0.023-2 diffutils_1:3.3-3 doxygen_1.8.11-3 dpkg_1.18.10 dpkg-dev_1.18.10 e2fslibs_1.43.1-1 e2fsprogs_1.43.1-1 eatmydata_105-3 fakeroot_1.21-1 file_1:5.28-4 findutils_4.6.0+git+20160703-2 flex_2.6.1-1 fontconfig_2.11.0-6.7 fontconfig-config_2.11.0-6.7 fonts-dejavu-core_2.37-1 g++_4:6.1.1-1 g++-6_6.2.0-1 gcc_4:6.1.1-1 gcc-5-base_5.4.1-1 gcc-6_6.2.0-1 gcc-6-base_6.2.0-1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gpgv_2.1.14-5 graphviz_2.38.0-15 grep_2.25-6 groff-base_1.22.3-8 gzip_1.6-5 hostname_3.18 icu-devtools_57.1-3 init-system-helpers_1.42 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3 libapt-pkg5.0_1.3~rc2 libarchive-zip-perl_1.59-1 libasan2_5.4.1-1 libasan3_6.2.0-1 libatomic1_6.2.0-1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.6-1 libaudit1_1:2.6.6-1 libbison-dev_2:3.0.4.dfsg-1 libblkid1_2.28.1-1 libboost-python-dev_1.61.0.2 libboost-python1.61-dev_1.61.0+dfsg-2.1 libboost-python1.61.0_1.61.0+dfsg-2.1 libboost1.61-dev_1.61.0+dfsg-2.1 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libc-bin_2.23-5 libc-dev-bin_2.23-5 libc6_2.23-5 libc6-dev_2.23-5 libcairo2_1.14.6-1+b1 libcap-ng0_0.7.7-3 libcc1-0_6.2.0-1 libcdt5_2.38.0-15 libcgraph6_2.38.0-15 libcilkrts5_6.2.0-1 libclang-common-3.8-dev_1:3.8.1-9 libclang1-3.6_1:3.6.2-3 libclang1-3.8_1:3.8.1-9 libcomerr2_1.43.1-1 libcroco3_0.6.11-1 libdatrie1_0.2.10-2 libdb5.3_5.3.28-12 libdebconfclient0_0.215 libdpkg-perl_1.18.10 libeatmydata1_105-3 libedit2_3.1-20150325-1+b1 libexpat1_2.2.0-1 libexpat1-dev_2.2.0-1 libfakeroot_1.21-1 libfdisk1_2.28.1-1 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.023-2 libfl-dev_2.6.1-1 libfontconfig1_2.11.0-6.7 libfreetype6_2.6.3-3+b1 libgc1c2_1:7.4.2-8 libgcc-5-dev_5.4.1-1 libgcc-6-dev_6.2.0-1 libgcc1_1:6.2.0-1 libgcrypt20_1.7.3-1 libgd3_2.2.3-3+b1 libgdbm3_1.8.3-14 libglib2.0-0_2.48.1-3 libgmp10_2:6.1.1+dfsg-1 libgomp1_6.2.0-1 libgpg-error0_1.24-1 libgraphite2-3_1.3.8-1 libgts-0.7-5_0.7.6+darcs121130-1.2 libgvc6_2.38.0-15 libgvpr2_2.38.0-15 libharfbuzz0b_1.2.7-1+b1 libice6_2:1.0.9-1+b1 libicu-dev_57.1-3 libicu57_57.1-3 libisl15_0.17.1-1 libitm1_6.2.0-1 libjbig0_2.1-3.1 libjpeg62-turbo_1:1.5.0-1 libllvm3.6v5_1:3.6.2-3 libllvm3.8_1:3.8.1-9 liblsan0_6.2.0-1 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2 liblzma5_5.1.1alpha+20120614-2.1 libmagic-mgc_1:5.28-4 libmagic1_1:5.28-4 libmount1_2.28.1-1 libmpc3_1.0.3-1 libmpdec2_2.4.2-1 libmpfr4_3.1.4-2 libmpx0_5.4.1-1 libmpx2_6.2.0-1 libncurses5_6.0+20160625-1 libncursesw5_6.0+20160625-1 libobjc-5-dev_5.4.1-1 libobjc-6-dev_6.2.0-1 libobjc4_6.2.0-1 libpam-modules_1.1.8-3.3 libpam-modules-bin_1.1.8-3.3 libpam-runtime_1.1.8-3.3 libpam0g_1.1.8-3.3 libpango-1.0-0_1.40.1-1 libpangocairo-1.0-0_1.40.1-1 libpangoft2-1.0-0_1.40.1-1 libpathplan4_2.38.0-15 libpcre3_2:8.39-2 libperl5.22_5.22.2-3 libpipeline1_1.4.1-2 libpixman-1-0_0.33.6-1 libpng16-16_1.6.24-2 libpython-all-dbg_2.7.11-2 libpython-all-dev_2.7.11-2 libpython-dbg_2.7.11-2 libpython-dev_2.7.11-2 libpython-stdlib_2.7.11-2 libpython2.7_2.7.12-2 libpython2.7-dbg_2.7.12-2 libpython2.7-dev_2.7.12-2 libpython2.7-minimal_2.7.12-2 libpython2.7-stdlib_2.7.12-2 libpython3-dev_3.5.1-4 libpython3-stdlib_3.5.1-4 libpython3.5_3.5.2-3 libpython3.5-dev_3.5.2-3 libpython3.5-minimal_3.5.2-3 libpython3.5-stdlib_3.5.2-3 libquadmath0_6.2.0-1 libreadline6_6.3-8+b4 libselinux1_2.5-3 libsemanage-common_2.5-1 libsemanage1_2.5-1 libsepol1_2.5-1 libsigsegv2_2.10-5 libsm6_2:1.2.2-1+b1 libsmartcols1_2.28.1-1 libsqlite3-0_3.14.1-1 libss2_1.43.1-1 libssl1.0.2_1.0.2h-1 libstdc++-5-dev_5.4.1-1 libstdc++-6-dev_6.2.0-1 libstdc++6_6.2.0-1 libsystemd0_231-5 libthai-data_0.1.25-1 libthai0_0.1.25-1 libtiff5_4.0.6-2 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1 libtool_2.4.6-2 libtool-bin_2.4.6-2 libtsan0_6.2.0-1 libubsan0_6.2.0-1 libudev1_231-5 libunistring0_0.9.6+really0.9.3-0.1 libustr-1.0-1_1.0.4-5 libuuid1_2.28.1-1 libwebp6_0.5.1-2 libx11-6_2:1.6.3-1 libx11-data_2:1.6.3-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-render0_1.11.1-1.1 libxcb-shm0_1.11.1-1.1 libxcb1_1.11.1-1.1 libxdmcp6_1:1.1.2-1.1 libxdot4_2.38.0-15 libxerces-c-dev_3.1.3+debian-2.1+b1 libxerces-c3.1_3.1.3+debian-2.1+b1 libxext6_2:1.3.3-1 libxml2_2.9.4+dfsg1-1+b1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.11-1+b1 libxrender1_1:0.9.9-2 libxt6_1:1.1.5-1 linux-libc-dev_4.7.2-1 login_1:4.2-3.1 lsb-base_9.20160629 m4_1.4.17-5 make_4.1-9 man-db_2.7.5-1 mawk_1.3.3-17 mime-support_3.60 mount_2.28.1-1 multiarch-support_2.23-5 ncurses-base_6.0+20160625-1 ncurses-bin_6.0+20160625-1 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.2-3 perl-base_5.22.2-3 perl-modules-5.22_5.22.2-3 po-debconf_1.0.19 python_2.7.11-2 python-all_2.7.11-2 python-all-dbg_2.7.11-2 python-all-dev_2.7.11-2 python-dbg_2.7.11-2 python-dev_2.7.11-2 python-minimal_2.7.11-2 python2.7_2.7.12-2 python2.7-dbg_2.7.12-2 python2.7-dev_2.7.12-2 python2.7-minimal_2.7.12-2 python3_3.5.1-4 python3-dev_3.5.1-4 python3-minimal_3.5.1-4 python3.5_3.5.2-3 python3.5-dev_3.5.2-3 python3.5-minimal_3.5.2-3 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-librcsb-core-wrapper-dummy_0.invalid.0 sed_4.2.2-7.1 sensible-utils_0.0.9 sysvinit-utils_2.88dsf-59.8 tar_1.29b-1 ucf_3.0036 util-linux_2.28.1-1 x11-common_1:7.7+16 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Jul 10 16:45:56 2015 UTC using RSA key ID gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./librcsb-core-wrapper_1.005-4.dsc dpkg-source: info: extracting librcsb-core-wrapper in /<> dpkg-source: info: unpacking librcsb-core-wrapper_1.005.orig.tar.gz dpkg-source: info: unpacking librcsb-core-wrapper_1.005-4.debian.tar.xz dpkg-source: info: applying wrapper-module dpkg-source: info: applying rm-duplicate-module dpkg-source: info: applying bash dpkg-source: info: applying unistd dpkg-source: info: applying devnull-log dpkg-source: info: applying docs dpkg-source: info: applying objectfiles dpkg-source: info: applying parallel-build dpkg-source: info: applying setup.py.in dpkg-source: info: applying hardening dpkg-source: info: applying spelling dpkg-source: info: applying exit-in-shlib dpkg-source: info: applying make_test_target dpkg-source: info: applying regcomp_cert_fix.patch dpkg-source: info: applying gcc5.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-7bbb34c2-753e-40e3-9361-b3a8824910da SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package librcsb-core-wrapper dpkg-buildpackage: info: source version 1.005-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build librcsb-core-wrapper-1.005 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --parallel --with python2 dh_testdir debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 clean make[2]: Entering directory '/<>' ------------------------------------------------------------ **** Cleaning etc **** ------------------------------------------------------------ ------------------------------------------------------------ **** Cleaning common **** ------------------------------------------------------------ make[3]: Entering directory '/<>/common' Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/common' ------------------------------------------------------------ **** Cleaning tables **** ------------------------------------------------------------ make[3]: Entering directory '/<>/tables' Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/tables' ------------------------------------------------------------ **** Cleaning regex **** ------------------------------------------------------------ make[3]: Entering directory '/<>/regex' Makefile:30: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/regex' ------------------------------------------------------------ **** Cleaning cif-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file' Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/cif-file' ------------------------------------------------------------ **** Cleaning cif-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-parser' Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/cif-parser' ------------------------------------------------------------ **** Cleaning cif-file-util **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file-util' Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/cif-file-util' ------------------------------------------------------------ **** Cleaning dict-obj-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/dict-obj-file' Makefile:31: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Cleaning pdbml-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/pdbml-parser' Makefile:35: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/pdbml-parser' ------------------------------------------------------------ **** Cleaning cctbx **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cctbx' make[3]: Leaving directory '/<>/cctbx' ------------------------------------------------------------ **** Cleaning test results in dict-obj-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/dict-obj-file' Makefile:31: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Cleaning test results in pdbml-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/pdbml-parser' Makefile:35: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/pdbml-parser' rm -rf docs rm -rf rcsb make[2]: Leaving directory '/<>' rm -rf wrapper/python/build make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch --parallel --with python2 dh_testdir -a -O--parallel dh_update_autotools_config -a -O--parallel dh_auto_configure -a -O--parallel debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build --parallel make -j1 make[2]: Entering directory '/<>' sh -c '\ export PIC=-fPIC; \ export WWPDB_XERCESC_INC=/usr/include; \ export WWPDB_XERCESC_LIB_DIR=/usr/lib; \ export WWPDB_XERCESC_LIB=xerces-c; \ ( cd ./util; ./compile.sh ); \ libtool --mode=link g++ -version-info 0:1:0 -rpath /usr/lib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,--as-needed -l${WWPDB_XERCESC_LIB} -o lib/librcsb-core-wrapper.la lib/*.lo' ------------------------------------------------------------ **** Making etc **** ------------------------------------------------------------ Using platform specific configuration for system: gnu3 Platform configuration done. ------------------------------------------------------------ **** Making common **** ------------------------------------------------------------ make[3]: Entering directory '/<>/common' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbPlatform.C -o ./obj/RcsbPlatform.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbPlatform.C -fPIC -DPIC -o ./obj/.libs/RcsbPlatform.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbPlatform.C -o ./obj/RcsbPlatform.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbFile.C -o ./obj/RcsbFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbFile.C -fPIC -DPIC -o ./obj/.libs/RcsbFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbFile.C -o ./obj/RcsbFile.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/BlockIO.C -o ./obj/BlockIO.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/BlockIO.C -fPIC -DPIC -o ./obj/.libs/BlockIO.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/BlockIO.C -o ./obj/BlockIO.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Serializer.C -o ./obj/Serializer.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Serializer.C -fPIC -DPIC -o ./obj/.libs/Serializer.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Serializer.C -o ./obj/Serializer.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenString.C -o ./obj/GenString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenString.C -fPIC -DPIC -o ./obj/.libs/GenString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenString.C -o ./obj/GenString.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifString.C -o ./obj/CifString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifString.C -fPIC -DPIC -o ./obj/.libs/CifString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifString.C -o ./obj/CifString.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenCont.C -o ./obj/GenCont.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenCont.C -fPIC -DPIC -o ./obj/.libs/GenCont.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenCont.C -o ./obj/GenCont.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Exceptions.C -o ./obj/Exceptions.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Exceptions.C -fPIC -DPIC -o ./obj/.libs/Exceptions.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Exceptions.C -o ./obj/Exceptions.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DataInfo.C -o ./obj/DataInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DataInfo.C -fPIC -DPIC -o ./obj/.libs/DataInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DataInfo.C -o ./obj/DataInfo.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_vector.C -o ./obj/mapped_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_vector.C -fPIC -DPIC -o ./obj/.libs/mapped_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_vector.C -o ./obj/mapped_vector.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_ptr_vector.C -o ./obj/mapped_ptr_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_ptr_vector.C -fPIC -DPIC -o ./obj/.libs/mapped_ptr_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_ptr_vector.C -o ./obj/mapped_ptr_vector.o >/dev/null 2>&1 a - RcsbPlatform.o a - RcsbFile.o a - BlockIO.o a - Serializer.o a - GenString.o a - CifString.o a - GenCont.o a - Exceptions.o a - DataInfo.o a - mapped_vector.o a - mapped_ptr_vector.o cp -f -t ../lib ./obj/RcsbPlatform.o ./obj/RcsbFile.o ./obj/BlockIO.o ./obj/Serializer.o ./obj/GenString.o ./obj/CifString.o ./obj/GenCont.o ./obj/Exceptions.o ./obj/DataInfo.o ./obj/mapped_vector.o ./obj/mapped_ptr_vector.o ./obj/RcsbPlatform.lo ./obj/RcsbFile.lo ./obj/BlockIO.lo ./obj/Serializer.lo ./obj/GenString.lo ./obj/CifString.lo ./obj/GenCont.lo ./obj/Exceptions.lo ./obj/DataInfo.lo ./obj/mapped_vector.lo ./obj/mapped_ptr_vector.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/RcsbPlatform.o ./obj/.libs/RcsbFile.o ./obj/.libs/BlockIO.o ./obj/.libs/Serializer.o ./obj/.libs/GenString.o ./obj/.libs/CifString.o ./obj/.libs/GenCont.o ./obj/.libs/Exceptions.o ./obj/.libs/DataInfo.o ./obj/.libs/mapped_vector.o ./obj/.libs/mapped_ptr_vector.o true lib/common.a lib/common.a is up to date. ../etc/cifinstall -m 0444 ./lib/common.a ../lib x - RcsbPlatform.o x - RcsbFile.o x - BlockIO.o x - Serializer.o x - GenString.o x - CifString.o x - GenCont.o x - Exceptions.o x - DataInfo.o x - mapped_vector.o x - mapped_ptr_vector.o x - RcsbPlatform.o x - RcsbFile.o x - BlockIO.o x - Serializer.o x - GenString.o x - CifString.o x - GenCont.o x - Exceptions.o x - DataInfo.o x - mapped_vector.o x - mapped_ptr_vector.o a - BlockIO.o a - CifString.o a - DataInfo.o a - Exceptions.o a - GenCont.o a - GenString.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - mapped_ptr_vector.o a - mapped_vector.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/common' ------------------------------------------------------------ **** Making tables **** ------------------------------------------------------------ make[3]: Entering directory '/<>/tables' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TTable.C -o ./obj/TTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TTable.C -fPIC -DPIC -o ./obj/.libs/TTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TTable.C -o ./obj/TTable.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ITTable.C -o ./obj/ITTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ITTable.C -fPIC -DPIC -o ./obj/.libs/ITTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ITTable.C -o ./obj/ITTable.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ISTable.C -o ./obj/ISTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ISTable.C -fPIC -DPIC -o ./obj/.libs/ISTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ISTable.C -o ./obj/ISTable.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TableFile.C -o ./obj/TableFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -O -fPIC -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TableFile.C -fPIC -DPIC -o ./obj/.libs/TableFile.o src/TableFile.C:357:11: error: reference cannot be bound to dereferenced null pointer in well-defined C++ code; comparison may be assumed to always evaluate to true [-Werror,-Wtautological-undefined-compare] if (&(_tables[tableIndex]) != NULL) ~^~~~~~~~~~~~~~~~~~~~ ~~~~ ../include/mapped_ptr_vector.h:70:8: note: 'operator[]' returns a reference T& operator[](unsigned int index); ^ src/TableFile.C:420:19: error: reference cannot be bound to dereferenced null pointer in well-defined C++ code; comparison may be assumed to always evaluate to true [-Werror,-Wtautological-undefined-compare] if (&(_blocks[blockI]._tables[tableI]) != NULL) ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~ ../include/mapped_ptr_vector.h:70:8: note: 'operator[]' returns a reference T& operator[](unsigned int index); ^ src/TableFile.C:562:19: error: reference cannot be bound to dereferenced null pointer in well-defined C++ code; comparison may be assumed to always evaluate to false [-Werror,-Wtautological-undefined-compare] if (&(_blocks[blockI]._tables[tableI]) == NULL) ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~ ../include/mapped_ptr_vector.h:70:8: note: 'operator[]' returns a reference T& operator[](unsigned int index); ^ src/TableFile.C:627:19: error: reference cannot be bound to dereferenced null pointer in well-defined C++ code; comparison may be assumed to always evaluate to false [-Werror,-Wtautological-undefined-compare] if (&(_blocks[blockI]._tables[tableI]) == NULL) ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~ ../include/mapped_ptr_vector.h:70:8: note: 'operator[]' returns a reference T& operator[](unsigned int index); ^ src/TableFile.C:784:11: error: reference cannot be bound to dereferenced null pointer in well-defined C++ code; comparison may be assumed to always evaluate to true [-Werror,-Wtautological-undefined-compare] if (&(_blocks[blockIndex]._tables[tableIndex]) != NULL) ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~ ../include/mapped_ptr_vector.h:70:8: note: 'operator[]' returns a reference T& operator[](unsigned int index); ^ 5 errors generated. Makefile:141: recipe for target 'TableFile.o' failed make[3]: *** [TableFile.o] Error 1 make[3]: Leaving directory '/<>/tables' libtool: link: g++ -fPIC -DPIC -shared lib/.libs/BlockIO.o lib/.libs/CifString.o lib/.libs/DataInfo.o lib/.libs/Exceptions.o lib/.libs/GenCont.o lib/.libs/GenString.o lib/.libs/RcsbFile.o lib/.libs/RcsbPlatform.o lib/.libs/Serializer.o lib/.libs/mapped_ptr_vector.o lib/.libs/mapped_vector.o -lxerces-c -lstdc++ -lm -lc -lgcc_s -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-soname -Wl,librcsb-core-wrapper.so.0 -o lib/.libs/librcsb-core-wrapper.so.0.0.1 libtool: link: (cd "lib/.libs" && rm -f "librcsb-core-wrapper.so.0" && ln -s "librcsb-core-wrapper.so.0.0.1" "librcsb-core-wrapper.so.0") libtool: link: (cd "lib/.libs" && rm -f "librcsb-core-wrapper.so" && ln -s "librcsb-core-wrapper.so.0.0.1" "librcsb-core-wrapper.so") libtool: link: ar cru lib/.libs/librcsb-core-wrapper.a lib/BlockIO.o lib/CifString.o lib/DataInfo.o lib/Exceptions.o lib/GenCont.o lib/GenString.o lib/RcsbFile.o lib/RcsbPlatform.o lib/Serializer.o lib/mapped_ptr_vector.o lib/mapped_vector.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib lib/.libs/librcsb-core-wrapper.a libtool: link: ( cd "lib/.libs" && rm -f "librcsb-core-wrapper.la" && ln -s "../librcsb-core-wrapper.la" "librcsb-core-wrapper.la" ) cd wrapper && make OPT=-O make[3]: Entering directory '/<>/wrapper' sed -e 's!@C++FLAGS@!-O -ansi -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I -I !g; s!@DEFINES@! -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW !g; s!@EXT_COMP_OPT@!-ftemplate-depth-128 -fno-inline -Wall!; s!@EXT_LIBS_DIRS@!-L -L -L!g; s!@EXT_LIBS@!-l -l -l!g;' < "python/setup.py.in" > "python/setup.py" ln -sf ../src python/src make[3]: Leaving directory '/<>/wrapper' make[2]: Leaving directory '/<>' /usr/bin/make doc make[2]: Entering directory '/<>' rm -rf rcsb && cp -r include rcsb grep -lr '^#include "' rcsb | xargs sed -i -e '/^#include "/{ s/#include "\([^"]\+\)"/#include /; }' mkdir -p docs/doxyfiles echo PROJECT_NAME = librcsb-core-wrapper > docs/doxyfiles/Doxyfile echo PROJECT_NUMBER = 1.005 >> docs/doxyfiles/Doxyfile echo OUTPUT_DIRECTORY = docs >> docs/doxyfiles/Doxyfile echo INPUT = rcsb >> docs/doxyfiles/Doxyfile cat etc/Doxyfile-template >> docs/doxyfiles/Doxyfile doxygen docs/doxyfiles/Doxyfile warning: Tag `USE_WINDOWS_ENCODING' at line 75 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `DETAILS_AT_TOP' at line 177 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `SHOW_DIRECTORIES' at line 411 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `HTML_ALIGN_MEMBERS' at line 732 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `XML_SCHEMA' at line 964 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `XML_DTD' at line 970 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `MAX_DOT_GRAPH_WIDTH' at line 1246 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `MAX_DOT_GRAPH_HEIGHT' at line 1254 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" make[2]: Leaving directory '/<>' dh_auto_build --parallel --sourcedirectory=wrapper/python python-dbg setup.py build --force running build running build_ext building 'CorePyWrap' extension creating build creating build/temp.linux-x86_64-2.7-pydebug creating build/temp.linux-x86_64-2.7-pydebug/src x86_64-linux-gnu-gcc -pthread -g -O0 -Wall -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7_d -c src/CifDataInfoPyWrap.C -o build/temp.linux-x86_64-2.7-pydebug/src/CifDataInfoPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW src/CifDataInfoPyWrap.C:6:10: fatal error: 'CifDataInfo.h' file not found #include "CifDataInfo.h" ^ 1 error generated. error: command 'x86_64-linux-gnu-gcc' failed with exit status 1 [35197 refs] dh_auto_build: python-dbg setup.py build --force returned exit code 1 debian/rules:23: recipe for target 'override_dh_auto_build-py' failed make[1]: *** [override_dh_auto_build-py] Error 1 make[1]: Leaving directory '/<>' debian/rules:14: recipe for target 'build-arch' failed make: *** [build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 2016-08-29T16:56:17Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 0 Build-Time: 23 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 296 Job: librcsb-core-wrapper_1.005-4 Machine Architecture: amd64 Package: librcsb-core-wrapper Package-Time: 452 Source-Version: 1.005-4 Space: 0 Status: failed Version: 1.005-4 -------------------------------------------------------------------------------- Finished at 2016-08-29T16:56:17Z Build needed 00:00:00, 0k disc space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 453.373739753s DC-Time-Estimation: 453.373739753 versus expected 291 (r/m: 0.557985359975945 ; m: 291.0)