DC-Build-Header: ga 5.4~beta~r10636+dfsg-5 / 2017-07-06 17:11:20 +0000 DC-Task: type:rebuild-binarch-only source:ga version:5.4~beta~r10636+dfsg-5 chroot:unstable esttime:1275 logfile:/tmp/ga_5.4~beta~r10636+dfsg-5_unstable_clang3.9.log modes:clang:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang ga_5.4~beta~r10636+dfsg-5' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-42-111.eu-central-1.compute.internal +==============================================================================+ | ga 5.4~beta~r10636+dfsg-5 (amd64) Thu, 06 Jul 2017 17:11:21 +0000 | +==============================================================================+ Package: ga Version: 5.4~beta~r10636+dfsg-5 Source Version: 5.4~beta~r10636+dfsg-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-ab6f2517-3386-4a9a-9035-7128a848afe0' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang ---------- + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=3.9 + echo 'Install of clang-3.9' Install of clang-3.9 + apt-get update Hit:1 http://127.0.0.1:9999/debian unstable InRelease Get:2 http://127.0.0.1:9999/debian unstable/main Translation-en [5730 kB] Fetched 5730 kB in 1s (3806 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-3.9 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libbsd0 libclang-common-3.9-dev libclang1-3.9 libedit2 libjsoncpp1 libllvm3.9 libncurses5 libobjc-6-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-3.9-doc Recommended packages: llvm-3.9-dev python libgpm2 The following NEW packages will be installed: clang-3.9 libbsd0 libclang-common-3.9-dev libclang1-3.9 libedit2 libjsoncpp1 libllvm3.9 libncurses5 libobjc-6-dev libobjc4 0 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. Need to get 57.7 MB of archives. After this operation, 251 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.5-1 [89.6 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5 amd64 6.0+20161126-1 [93.4 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20170329-1 [85.2 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libllvm3.9 amd64 1:3.9.1-10 [11.3 MB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-3.9 amd64 1:3.9.1-10 [5875 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 7.1.0-9 [51.0 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-6-dev amd64 6.4.0-1 [197 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-3.9-dev amd64 1:3.9.1-10 [2573 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 clang-3.9 amd64 1:3.9.1-10 [37.4 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 57.7 MB in 0s (95.0 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9711 files and directories currently installed.) Preparing to unpack .../0-libbsd0_0.8.5-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.5-1) ... Selecting previously unselected package libncurses5:amd64. Preparing to unpack .../1-libncurses5_6.0+20161126-1_amd64.deb ... Unpacking libncurses5:amd64 (6.0+20161126-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../2-libedit2_3.1-20170329-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20170329-1) ... Selecting previously unselected package libllvm3.9:amd64. Preparing to unpack .../3-libllvm3.9_1%3a3.9.1-10_amd64.deb ... Unpacking libllvm3.9:amd64 (1:3.9.1-10) ... Selecting previously unselected package libclang1-3.9:amd64. Preparing to unpack .../4-libclang1-3.9_1%3a3.9.1-10_amd64.deb ... Unpacking libclang1-3.9:amd64 (1:3.9.1-10) ... Selecting previously unselected package libjsoncpp1:amd64. Preparing to unpack .../5-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../6-libobjc4_7.1.0-9_amd64.deb ... Unpacking libobjc4:amd64 (7.1.0-9) ... Selecting previously unselected package libobjc-6-dev:amd64. Preparing to unpack .../7-libobjc-6-dev_6.4.0-1_amd64.deb ... Unpacking libobjc-6-dev:amd64 (6.4.0-1) ... Selecting previously unselected package libclang-common-3.9-dev. Preparing to unpack .../8-libclang-common-3.9-dev_1%3a3.9.1-10_amd64.deb ... Unpacking libclang-common-3.9-dev (1:3.9.1-10) ... Selecting previously unselected package clang-3.9. Preparing to unpack .../9-clang-3.9_1%3a3.9.1-10_amd64.deb ... Unpacking clang-3.9 (1:3.9.1-10) ... Setting up libncurses5:amd64 (6.0+20161126-1) ... Setting up libobjc4:amd64 (7.1.0-9) ... Setting up libbsd0:amd64 (0.8.5-1) ... Processing triggers for libc-bin (2.24-12) ... Setting up libobjc-6-dev:amd64 (6.4.0-1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libllvm3.9:amd64 (1:3.9.1-10) ... Setting up libclang-common-3.9-dev (1:3.9.1-10) ... Setting up libclang1-3.9:amd64 (1:3.9.1-10) ... Setting up clang-3.9 (1:3.9.1-10) ... Processing triggers for libc-bin (2.24-12) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-3.9 g++-4.6 + ln -s clang-3.9 gcc-4.6 + ln -s clang-3.9 cpp-4.6 + ln -s clang-3.9 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-3.9 g++-4.7 + ln -s clang-3.9 gcc-4.7 + ln -s clang-3.9 cpp-4.7 + ln -s clang-3.9 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-3.9 g++-4.8 + ln -s clang-3.9 gcc-4.8 + ln -s clang-3.9 cpp-4.8 + ln -s clang-3.9 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-3.9 g++-4.9 + ln -s clang-3.9 gcc-4.9 + ln -s clang-3.9 cpp-4.9 + ln -s clang-3.9 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-3.9 g++-5 + ln -s clang-3.9 gcc-5 + ln -s clang-3.9 cpp-5 + ln -s clang-3.9 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-3.9 g++-6 + ln -s clang-3.9 gcc-6 + ln -s clang-3.9 cpp-6 + ln -s clang-3.9 gcc + echo 'gcc-6 hold' + dpkg --set-selections + echo 'g++-6 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-3.9 g++-7 + ln -s clang-3.9 gcc-7 + ln -s clang-3.9 cpp-7 + ln -s clang-3.9 gcc + echo 'gcc-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + cd - /build/ga-sZNcbU + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'ga' packaging is maintained in the 'Svn' version control system at: svn://anonscm.debian.org/debichem/unstable/ga/ Need to get 10.7 MB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main ga 5.4~beta~r10636+dfsg-5 (dsc) [2116 B] Get:2 http://127.0.0.1:9999/debian unstable/main ga 5.4~beta~r10636+dfsg-5 (tar) [10.7 MB] Get:3 http://127.0.0.1:9999/debian unstable/main ga 5.4~beta~r10636+dfsg-5 (diff) [8196 B] Fetched 10.7 MB in 0s (34.6 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/ga-sZNcbU/ga-5.4~beta~r10636+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/ga-sZNcbU' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-AdDRDs/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-AdDRDs/apt_archive ./ InRelease Get:2 copy:/<>/resolver-AdDRDs/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-AdDRDs/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-AdDRDs/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-AdDRDs/apt_archive ./ Packages [432 B] Fetched 1738 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 782 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-AdDRDs/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [782 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 782 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10178 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: autotools-dev, debhelper (>= 9.0~), gfortran, libarmci-mpi-dev, libblas-dev, liblapack-dev, libscalapack-mpi-dev, mpi-default-dev, openssh-client Filtered Build-Depends: autotools-dev, debhelper (>= 9.0~), gfortran, libarmci-mpi-dev, libblas-dev, liblapack-dev, libscalapack-mpi-dev, mpi-default-dev, openssh-client dpkg-deb: building package 'sbuild-build-depends-ga-dummy' in '/<>/resolver-AdDRDs/apt_archive/sbuild-build-depends-ga-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-ga-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-AdDRDs/apt_archive ./ InRelease Get:2 copy:/<>/resolver-AdDRDs/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-AdDRDs/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-AdDRDs/apt_archive ./ Sources [546 B] Get:5 copy:/<>/resolver-AdDRDs/apt_archive ./ Packages [625 B] Fetched 2134 B in 0s (0 B/s) Reading package lists... Reading package lists... Install ga build dependencies (apt-based resolver) -------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-6 groff-base intltool-debian libarchive-zip-perl libarmci-mpi-dev libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libcroco3 libfabric1 libfile-stripnondeterminism-perl libgfortran-6-dev libgfortran3 libglib2.0-0 libgssapi-krb5-2 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libltdl-dev libltdl7 libmagic-mgc libmagic1 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpipeline1 libpsm-infinipath1 librdmacm1 libscalapack-mpi-dev libscalapack-openmpi1 libsigsegv2 libssl1.0.2 libtimedate-perl libtool libxml2 m4 man-db mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-6-multilib gfortran-6-doc libgfortran3-dbg libcoarrays-dev groff liblapack-doc krb5-doc krb5-user libhwloc-contrib-plugins libtool-doc openmpi-doc pciutils scalapack-doc gcj-jdk m4-doc less www-browser opencl-icd keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl Recommended packages: curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales xml-core xauth libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-6 groff-base intltool-debian libarchive-zip-perl libarmci-mpi-dev libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libcroco3 libfabric1 libfile-stripnondeterminism-perl libgfortran-6-dev libgfortran3 libglib2.0-0 libgssapi-krb5-2 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libltdl-dev libltdl7 libmagic-mgc libmagic1 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpipeline1 libpsm-infinipath1 librdmacm1 libscalapack-mpi-dev libscalapack-openmpi1 libsigsegv2 libssl1.0.2 libtimedate-perl libtool libxml2 m4 man-db mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client po-debconf sbuild-build-depends-ga-dummy 0 upgraded, 72 newly installed, 0 to remove and 0 not upgraded. Need to get 44.0 MB of archives. After this operation, 163 MB of additional disk space will be used. Get:1 copy:/<>/resolver-AdDRDs/apt_archive ./ sbuild-build-depends-ga-dummy 0.invalid.0 [838 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-9 [1160 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 9.0.12+nmu1 [186 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.4.1-2 [27.6 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.7.6.1-2 [1044 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.0.2 amd64 1.0.2l-2 [1294 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.30-1 [222 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.30-1 [111 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.30-1 [63.9 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-2+b1 [122 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libkeyutils1 amd64 1.5.9-9 [12.4 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5support0 amd64 1.15-1 [61.7 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 libk5crypto3 amd64 1.15-1 [119 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5-3 amd64 1.15-1 [311 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.15-1 [154 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-6 [7701 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-3 [715 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 openssh-client amd64 1:7.5p1-5 [775 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.11-1 [29.9 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-10 [338 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20161112.1 [73.4 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-2 [736 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-2 [433 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2 [545 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 14 [15.9 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.59-1 [95.5 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.035-2 [17.0 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.035-2 [10.7 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.52.3-1 [2742 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-1 [144 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-2+b1 [1301 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 10.6.2 [968 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran3 amd64 6.4.0-1 [265 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran-6-dev amd64 6.4.0-1 [299 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 gfortran-6 amd64 6.4.0-1 [6911 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 gfortran amd64 4:6.3.0-4d1 [1362 B] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 libarmci-mpi-dev amd64 0.0~git20160222-2 [48.8 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 libltdl7 amd64 2.4.6-2 [389 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 libnuma1 amd64 2.0.11-2.1 [33.3 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc5 amd64 1.11.5-1 [105 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 libnl-3-200 amd64 3.2.27-2 [61.5 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 libnl-route-3-200 amd64 3.2.27-2 [136 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 libibverbs1 amd64 1.2.1-2 [39.3 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+19.g67c0807.open-3 [169 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 librdmacm1 amd64 1.1.0-2 [49.4 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 libfabric1 amd64 1.4.0-1 [259 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 libpciaccess0 amd64 0.13.4-1+b2 [50.0 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1 [36.8 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc-plugins amd64 1.11.5-1 [16.1 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 libopenmpi2 amd64 2.1.1-6 [2062 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 openmpi-common all 2.1.1-6 [154 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 openmpi-bin amd64 2.1.1-6 [193 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 mpi-default-bin amd64 1.8 [4050 B] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 libblacs-openmpi1 amd64 1.1-40 [53.6 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libibverbs-dev amd64 1.2.1-2 [107 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libnuma-dev amd64 2.0.11-2.1 [46.0 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 libltdl-dev amd64 2.4.6-2 [161 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc-dev amd64 1.11.5-1 [167 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 libopenmpi-dev amd64 2.1.1-6 [1026 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 mpi-default-dev amd64 1.8 [4846 B] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 libblacs-mpi-dev amd64 1.1-40 [50.9 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 libblas-common amd64 3.7.1-1 [14.6 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 libblas3 amd64 3.7.1-1 [156 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 libblas-dev amd64 3.7.1-1 [162 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 liblapack3 amd64 3.7.1-1 [2141 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 liblapack-dev amd64 3.7.1-1 [2173 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 libscalapack-openmpi1 amd64 1.8.0-14 [2213 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 libscalapack-mpi-dev amd64 1.8.0-14 [2208 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 44.0 MB in 0s (65.8 MB/s) Selecting previously unselected package groff-base. 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Processing triggers for libc-bin (2.24-12) ... Setting up autotools-dev (20161112.1) ... Setting up libarmci-mpi-dev (0.0~git20160222-2) ... Setting up libltdl7:amd64 (2.4.6-2) ... Setting up libpciaccess0:amd64 (0.13.4-1+b2) ... Setting up libnuma-dev:amd64 (2.0.11-2.1) ... Setting up ocl-icd-libopencl1:amd64 (2.2.11-1) ... Setting up libkeyutils1:amd64 (1.5.9-9) ... Setting up bsdmainutils (9.0.12+nmu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libnl-3-200:amd64 (3.2.27-2) ... Setting up autopoint (0.19.8.1-2) ... Setting up libfile-stripnondeterminism-perl (0.035-2) ... Setting up gfortran-6 (6.4.0-1) ... Setting up libltdl-dev:amd64 (2.4.6-2) ... Setting up gettext (0.19.8.1-2+b1) ... Setting up liblapack3 (3.7.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libnl-route-3-200:amd64 (3.2.27-2) ... Setting up autoconf (2.69-10) ... Setting up file (1:5.30-1) ... Setting up libhwloc5:amd64 (1.11.5-1) ... Setting up libkrb5support0:amd64 (1.15-1) ... Setting up libhwloc-plugins (1.11.5-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15.1-2) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.7.6.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libtool (2.4.6-2) ... Setting up gfortran (4:6.3.0-4d1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libibverbs1 (1.2.1-2) ... Setting up libk5crypto3:amd64 (1.15-1) ... Setting up po-debconf (1.0.20) ... Setting up libhwloc-dev:amd64 (1.11.5-1) ... Setting up libblas-dev (3.7.1-1) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up librdmacm1 (1.1.0-2) ... Setting up libkrb5-3:amd64 (1.15-1) ... Setting up libibverbs-dev (1.2.1-2) ... Setting up liblapack-dev (3.7.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libfabric1 (1.4.0-1) ... Setting up libgssapi-krb5-2:amd64 (1.15-1) ... Setting up libopenmpi2:amd64 (2.1.1-6) ... Setting up openssh-client (1:7.5p1-5) ... Setting up libopenmpi-dev (2.1.1-6) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up openmpi-bin (2.1.1-6) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode Setting up mpi-default-dev (1.8) ... Setting up mpi-default-bin (1.8) ... Setting up libblacs-openmpi1 (1.1-40) ... Setting up libblacs-mpi-dev (1.1-40) ... Setting up libscalapack-openmpi1 (1.8.0-14) ... Setting up libscalapack-mpi-dev (1.8.0-14) ... Setting up dh-autoreconf (14) ... Setting up dh-strip-nondeterminism (0.035-2) ... Setting up debhelper (10.6.2) ... Setting up sbuild-build-depends-ga-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.24-12) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-2-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.28-6 dpkg-dev_1.18.24 g++-6_6.4.0-1 gcc-6_6.4.0-1 libc6-dev_2.24-12 libstdc++-6-dev_6.4.0-1 libstdc++6_7.1.0-9 linux-libc-dev_4.11.6-1 Package versions: adduser_3.115 apt_1.5~beta1 autoconf_2.69-10 automake_1:1.15.1-2 autopoint_0.19.8.1-2 autotools-dev_20161112.1 base-files_10 base-passwd_3.5.43 bash_4.4-5 binutils_2.28-6 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-1 build-essential_12.3 bzip2_1.0.6-8.1 clang-3.9_1:3.9.1-10 coreutils_8.26-3 cpp_4:6.3.0-4d1 cpp-6_6.4.0-1 dash_0.5.8-2.4 debconf_1.5.62 debfoster_2.7-2.1+b1 debhelper_10.6.2 debian-archive-keyring_2017.5 debianutils_4.8.1.1 dh-autoreconf_14 dh-strip-nondeterminism_0.035-2 diffutils_1:3.5-3 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.4-2 e2fsprogs_1.43.4-2 eatmydata_105-5 fakeroot_1.21-3.1 file_1:5.30-1 findutils_4.6.0+git+20170606-2 g++_4:6.3.0-4d1 g++-6_6.4.0-1 gcc_4:6.3.0-4d1 gcc-6_6.4.0-1 gcc-6-base_6.4.0-1 gcc-7-base_7.1.0-9 gettext_0.19.8.1-2+b1 gettext-base_0.19.8.1-2+b1 gfortran_4:6.3.0-4d1 gfortran-6_6.4.0-1 gpgv_2.1.18-8 grep_2.27-2 groff-base_1.22.3-9 gzip_1.6-5+b1 hostname_3.18+b1 init-system-helpers_1.48 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3+b1 libapt-pkg5.0_1.5~beta1 libarchive-zip-perl_1.59-1 libarmci-mpi-dev_0.0~git20160222-2 libasan3_6.4.0-1 libatomic1_7.1.0-9 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1+b1 libblacs-mpi-dev_1.1-40 libblacs-openmpi1_1.1-40 libblas-common_3.7.1-1 libblas-dev_3.7.1-1 libblas3_3.7.1-1 libblkid1_2.29.2-1 libbsd0_0.8.5-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-12 libc-dev-bin_2.24-12 libc6_2.24-12 libc6-dev_2.24-12 libcap-ng0_0.7.7-3+b1 libcc1-0_7.1.0-9 libcilkrts5_7.1.0-9 libclang-common-3.9-dev_1:3.9.1-10 libclang1-3.9_1:3.9.1-10 libcomerr2_1.43.4-2 libcroco3_0.6.12-1 libdb5.3_5.3.28-12+b1 libdebconfclient0_0.229 libdpkg-perl_1.18.24 libeatmydata1_105-5 libedit2_3.1-20170329-1 libfabric1_1.4.0-1 libfakeroot_1.21-3.1 libfdisk1_2.29.2-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.035-2 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.4.0-1 libgcc1_1:7.1.0-9 libgcrypt20_1.7.8-1 libgdbm3_1.8.3-14 libgfortran-6-dev_6.4.0-1 libgfortran3_6.4.0-1 libglib2.0-0_2.52.3-1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.13-2 libgomp1_7.1.0-9 libgpg-error0_1.27-3 libgssapi-krb5-2_1.15-1 libhogweed4_3.3-1+b1 libhwloc-dev_1.11.5-1 libhwloc-plugins_1.11.5-1 libhwloc5_1.11.5-1 libibverbs-dev_1.2.1-2 libibverbs1_1.2.1-2 libicu57_57.1-6 libidn2-0_0.16-1+b1 libisl15_0.18-1 libitm1_7.1.0-9 libjsoncpp1_1.7.4-3 libk5crypto3_1.15-1 libkeyutils1_1.5.9-9 libkrb5-3_1.15-1 libkrb5support0_1.15-1 liblapack-dev_3.7.1-1 liblapack3_3.7.1-1 libllvm3.9_1:3.9.1-10 liblsan0_7.1.0-9 libltdl-dev_2.4.6-2 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2+b1 liblzma5_5.2.2-1.2+b1 libmagic-mgc_1:5.30-1 libmagic1_1:5.30-1 libmount1_2.29.2-1 libmpc3_1.0.3-1+b2 libmpfr4_3.1.5-1 libmpx2_7.1.0-9 libncurses5_6.0+20161126-1 libncursesw5_6.0+20161126-1 libnettle6_3.3-1+b1 libnl-3-200_3.2.27-2 libnl-route-3-200_3.2.27-2 libnuma-dev_2.0.11-2.1 libnuma1_2.0.11-2.1 libobjc-6-dev_6.4.0-1 libobjc4_7.1.0-9 libopenmpi-dev_2.1.1-6 libopenmpi2_2.1.1-6 libp11-kit0_0.23.7-2 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpciaccess0_0.13.4-1+b2 libpcre3_2:8.39-3 libperl5.24_5.24.1-6 libpipeline1_1.4.1-2 libpsm-infinipath1_3.3+19.g67c0807.open-3 libquadmath0_7.1.0-9 librdmacm1_1.1.0-2 libscalapack-mpi-dev_1.8.0-14 libscalapack-openmpi1_1.8.0-14 libselinux1_2.6-3+b2 libsemanage-common_2.6-2 libsemanage1_2.6-2+b1 libsepol1_2.6-2 libsigsegv2_2.11-1 libsmartcols1_2.29.2-1 libss2_1.43.4-2 libssl1.0.2_1.0.2l-2 libstdc++-6-dev_6.4.0-1 libstdc++6_7.1.0-9 libsystemd0_233-10 libtasn1-6_4.12-2 libtimedate-perl_2.3000-2 libtinfo5_6.0+20161126-1 libtool_2.4.6-2 libtsan0_7.1.0-9 libubsan0_7.1.0-9 libudev1_233-10 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-1 libxml2_2.9.4+dfsg1-3 linux-libc-dev_4.11.6-1 login_1:4.4-4.1 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17+b3 mount_2.29.2-1 mpi-default-bin_1.8 mpi-default-dev_1.8 multiarch-support_2.24-12 ncurses-base_6.0+20161126-1 ncurses-bin_6.0+20161126-1 ocl-icd-libopencl1_2.2.11-1 openmpi-bin_2.1.1-6 openmpi-common_2.1.1-6 openssh-client_1:7.5p1-5 passwd_1:4.4-4.1 patch_2.7.5-1+b2 perl_5.24.1-6 perl-base_5.24.1-6 perl-modules-5.24_5.24.1-6 po-debconf_1.0.20 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ga-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9 sysvinit-utils_2.88dsf-59.9 tar_1.29b-1.1 util-linux_2.29.2-1 xz-utils_5.2.2-1.2+b1 zlib1g_1:1.2.8.dfsg-5 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Mar 13 14:18:52 2017 UTC gpgv: using RSA key AFCFEC8E669CE1C2 gpgv: issuer "ginggs@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ga_5.4~beta~r10636+dfsg-5.dsc dpkg-source: info: extracting ga in /<>/ga-5.4~beta~r10636+dfsg dpkg-source: info: unpacking ga_5.4~beta~r10636+dfsg.orig.tar.gz dpkg-source: info: unpacking ga_5.4~beta~r10636+dfsg-5.debian.tar.xz dpkg-source: info: applying fix_ga_target.patch dpkg-source: info: applying fix_armci_locks.patch dpkg-source: info: applying fix_comex_testsuite.patch dpkg-source: info: applying fix_armci_testsuite.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-ab6f2517-3386-4a9a-9035-7128a848afe0 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package ga dpkg-buildpackage: info: source version 5.4~beta~r10636+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Graham Inggs dpkg-source --before-build ga-5.4~beta~r10636+dfsg dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh_testdir dh_auto_clean dh_clean debian/rules build-arch dh build-arch dh_testdir -a dh_update_autotools_config -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/ga-5.4~beta~r10636+dfsg' dh_auto_configure -- \ --enable-cxx \ --with-tcgmsg \ --with-scalapack="-lscalapack-openmpi -lblacs-openmpi" \ --with-blas=-lblas \ --with-lapack=-llapack \ --with-mpi \ --with-armci=/usr ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --enable-cxx --with-tcgmsg "--with-scalapack=-lscalapack-openmpi -lblacs-openmpi" --with-blas=-lblas --with-lapack=-llapack --with-mpi --with-armci=/usr checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for TARGET base (64bit-ness checked later)... LINUX checking whether we think this system is what we call SYSV... yes checking whether we are cross compiling... no checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: configure: C compiler configure: checking for style of include used by make... GNU checking for mpicc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking dependency style of mpicc... none checking how to run the C preprocessor... mpicc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for C compiler vendor... gnu checking for perl... /usr/bin/perl checking for base mpicc compiler... gcc checking whether a simple C MPI program compiles... yes checking for TARGET 64bit-ness... LINUX64 configure: searching for external ARMCI... checking armci.h usability... yes checking armci.h presence... yes checking for armci.h... yes checking for library containing ARMCI_Init... -larmci checking for library containing armci_group_comm... no checking for ARMCI_Group.comm... yes checking for library containing ARMCI_Initialized... none required checking for library containing armci_stride_info_init... no checking for library containing armci_notify... no checking for library containing armci_msg_init... no checking for library containing armci_msg_finalize... no checking whether to enable assertions... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking assert.h usability... yes checking assert.h presence... yes checking for assert.h... yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking ffio.h usability... no checking ffio.h presence... no checking for ffio.h... no checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking linux/limits.h usability... yes checking linux/limits.h presence... yes checking for linux/limits.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking math.h usability... yes checking math.h presence... yes checking for math.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdint.h... (cached) yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/fsid.h usability... no checking sys/fsid.h presence... no checking for sys/fsid.h... no checking sys/fstyp.h usability... no checking sys/fstyp.h presence... no checking for sys/fstyp.h... no checking sys/ioctl.h usability... yes checking sys/ioctl.h presence... yes checking for sys/ioctl.h... yes checking sys/iosw.h usability... no checking sys/iosw.h presence... no checking for sys/iosw.h... no checking sys/ipc.h usability... yes checking sys/ipc.h presence... yes checking for sys/ipc.h... yes checking sys/mman.h usability... yes checking sys/mman.h presence... yes checking for sys/mman.h... yes checking sys/mount.h usability... yes checking sys/mount.h presence... yes checking for sys/mount.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/sem.h usability... yes checking sys/sem.h presence... yes checking for sys/sem.h... yes checking sys/shm.h usability... yes checking sys/shm.h presence... yes checking for sys/shm.h... yes checking sys/statfs.h usability... yes checking sys/statfs.h presence... yes checking for sys/statfs.h... yes checking for sys/stat.h... (cached) yes checking sys/statvfs.h usability... yes checking sys/statvfs.h presence... yes checking for sys/statvfs.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for sys/types.h... (cached) yes checking sys/vfs.h usability... yes checking sys/vfs.h presence... yes checking for sys/vfs.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking windows.h usability... no checking windows.h presence... no checking for windows.h... no checking for an ANSI C-conforming const... yes checking for inline... inline checking for C/C++ restrict keyword... __restrict checking for working volatile... yes checking for int64_t... yes checking for long double... yes checking for off_t... yes checking for pid_t... yes checking return type of signal handlers... void checking for size_t... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for preprocessor symbol for function name... __func__ checking for C global variable containing the name of the program... __progname checking whether mpicc supports #pragma weak... no checking for union semun in sys/sem.h... no checking for -fno-aggressive-loop-optimizations support in C compiler... checking size of void*... 8 checking size of char... 1 checking size of short... 2 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of float... 4 checking size of double... 8 checking size of long double... 16 checking for smallest C integer matching void*... long checking vfork.h usability... no checking vfork.h presence... no checking for vfork.h... no checking for fork... yes checking for vfork... yes checking for working fork... yes checking for working vfork... (cached) yes checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... (cached) yes checking for getpagesize... yes checking for working mmap... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking types of arguments for select... int,fd_set *,struct timeval * checking for library containing floor... -lm checking for library containing modf... none required checking for library containing pow... none required checking for library containing sqrt... none required checking for library containing hypot... none required checking for bcopy... yes checking for bzero... yes checking for create_shared_region... no checking for ftruncate... yes checking for gethostbyname... yes checking for gethostname... yes checking for getpagesize... (cached) yes checking for gettimeofday... yes checking for memalign... yes checking for memcpy... yes checking for memset... yes checking for munmap... yes checking for pause... yes checking for posix_memalign... yes checking for putenv... yes checking for select... yes checking for setenv... yes checking for shared_malloc... no checking for shmalloc... no checking for socket... yes checking for srand... yes checking for srandom... yes checking for strchr... yes checking for strdup... yes checking for strerror... yes checking for strstr... yes checking for strtol... yes checking for openpl in -lplot... no checking for specific C optimizations... configure: configure: C++ compiler configure: checking for mpic++... mpic++ checking whether we are using the GNU C++ compiler... yes checking whether mpic++ accepts -g... yes checking dependency style of mpic++... none checking for perl... (cached) /usr/bin/perl checking for base mpic++ compiler... g++ checking for C++ compiler vendor... gnu checking whether a simple C++ MPI program works... yes checking whether the compiler implements namespaces... yes checking for specific C++ optimizations... configure: configure: Assembler configure: checking dependency style of mpicc... none configure: configure: Fortran compiler configure: checking for mpif95... no checking for mpxlf95_r... no checking for mpxlf95... no checking for ftn... no checking for mpif90... mpif90 checking whether we are using the GNU Fortran 77 compiler... yes checking whether mpif90 accepts -g... yes checking for perl... (cached) /usr/bin/perl checking for base mpif90 compiler... gfortran checking for Fortran 77 compiler vendor... gnu checking whether a Fortran MPI program links natively... yes checking for Fortran 77 flag to suppress info messages... none checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath checking whether FLIBS needs -lgcc_s... no checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking how to pass symbols to preprocessed mpif90... -D checking whether mpif90 needs a flag to compile fixed format source... none checking whether mpif90 needs a flag to compile inconsistent types... none checking for desired Fortran INTEGER size... 8 checking for INTEGER size compile flag... configure: WARNING: !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! configure: WARNING: Unable to find a flag to promote Fortran integers configure: WARNING: INTEGER*8 promotion is not supported configure: WARNING: !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! checking for -fno-aggressive-loop-optimizations support in Fortran 77 compiler... -fno-aggressive-loop-optimizations checking size of Fortran INTEGER... no checking size of Fortran REAL... no checking size of Fortran DOUBLE PRECISION... no checking for dtime... no checking for etime... no checking for mpif90 flush routine... flush checking for flag to disable mpif90 main when linking with C main... none checking for routines to access the command line from Fortran... yes checking whether Fortran hidden string length convention is after args... configure: error: f2c string convention is neither after args nor after string "tail -v -n +0 config.log" ==> config.log <== This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by Global Arrays (GA) configure 5.4, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=${prefix}/lib/x86_64-linux-gnu --libexecdir=${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --enable-cxx --with-tcgmsg --with-scalapack=-lscalapack-openmpi -lblacs-openmpi --with-blas=-lblas --with-lapack=-llapack --with-mpi --with-armci=/usr ## --------- ## ## Platform. ## ## --------- ## hostname = ip-172-31-42-111 uname -m = x86_64 uname -r = 4.9.0-2-amd64 uname -s = Linux uname -v = #1 SMP Debian 4.9.18-1 (2017-03-30) /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /usr/games ## ----------- ## ## Core tests. ## ## ----------- ## configure:3333: checking build system type configure:3347: result: x86_64-pc-linux-gnu configure:3367: checking host system type configure:3380: result: x86_64-pc-linux-gnu configure:3435: checking for TARGET base (64bit-ness checked later) configure:3484: result: LINUX configure:3491: checking whether we think this system is what we call SYSV configure:3504: result: yes configure:3707: checking whether we are cross compiling configure:3717: result: no configure:3748: checking for a BSD-compatible install configure:3816: result: /usr/bin/install -c configure:3827: checking whether build environment is sane configure:3877: result: yes configure:4018: checking for a thread-safe mkdir -p configure:4057: result: /bin/mkdir -p configure:4070: checking for gawk configure:4100: result: no configure:4070: checking for mawk configure:4086: found /usr/bin/mawk configure:4097: result: mawk configure:4108: checking whether make sets $(MAKE) configure:4130: result: yes configure:4159: checking whether make supports nested variables configure:4176: result: yes configure:4252: checking whether to enable maintainer-specific portions of Makefiles configure:4261: result: no configure:4591: configure:4593: C compiler configure:4595: configure:4611: checking for style of include used by make configure:4639: result: GNU configure:4767: checking for mpicc configure:4783: found /usr/bin/mpicc configure:4794: result: mpicc configure:4825: checking for C compiler version configure:4834: mpicc --version >&5 clang version 3.9.1-10 (tags/RELEASE_391/rc2) Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin configure:4845: $? = 0 configure:4834: mpicc -v >&5 clang version 3.9.1-10 (tags/RELEASE_391/rc2) Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/6 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/6.4.0 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/7 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.1.0 Found candidate GCC installation: /usr/lib/gcc/x86_64-linux-gnu/6 Found candidate GCC installation: /usr/lib/gcc/x86_64-linux-gnu/6.4.0 ... rest of stderr output deleted ... configure:4845: $? = 0 configure:4834: mpicc -V >&5 clang: error: argument to '-V' is missing (expected 1 value) clang: error: no input files configure:4845: $? = 1 configure:4834: mpicc -qversion >&5 clang: error: unknown argument: '-qversion' clang: error: no input files configure:4845: $? = 1 configure:4865: checking whether the C compiler works configure:4887: mpicc -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:4891: $? = 0 configure:4939: result: yes configure:4942: checking for C compiler default output file name configure:4944: result: a.out configure:4950: checking for suffix of executables configure:4957: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:4961: $? = 0 configure:4983: result: configure:5005: checking whether we are cross compiling configure:5013: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:5017: $? = 0 configure:5024: ./conftest configure:5028: $? = 0 configure:5043: result: no configure:5048: checking for suffix of object files configure:5070: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5074: $? = 0 configure:5095: result: o configure:5099: checking whether we are using the GNU C compiler configure:5118: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5118: $? = 0 configure:5127: result: yes configure:5136: checking whether mpicc accepts -g configure:5156: mpicc -c -g -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5156: $? = 0 configure:5197: result: yes configure:5214: checking for mpicc option to accept ISO C89 configure:5277: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5277: $? = 0 configure:5290: result: none needed configure:5312: checking dependency style of mpicc configure:5423: result: none configure:5446: checking how to run the C preprocessor configure:5477: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:5477: $? = 0 configure:5491: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:5491: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | /* end confdefs.h. */ | #include configure:5516: result: mpicc -E configure:5536: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:5536: $? = 0 configure:5550: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:5550: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | /* end confdefs.h. */ | #include configure:5579: checking for grep that handles long lines and -e configure:5637: result: /bin/grep configure:5642: checking for egrep configure:5704: result: /bin/grep -E configure:5709: checking for ANSI C header files configure:5729: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5729: $? = 0 configure:5802: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:5802: $? = 0 configure:5802: ./conftest configure:5802: $? = 0 configure:5813: result: yes configure:5826: checking for sys/types.h configure:5826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5826: $? = 0 configure:5826: result: yes configure:5826: checking for sys/stat.h configure:5826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5826: $? = 0 configure:5826: result: yes configure:5826: checking for stdlib.h configure:5826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5826: $? = 0 configure:5826: result: yes configure:5826: checking for string.h configure:5826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5826: $? = 0 configure:5826: result: yes configure:5826: checking for memory.h configure:5826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5826: $? = 0 configure:5826: result: yes configure:5826: checking for strings.h configure:5826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5826: $? = 0 configure:5826: result: yes configure:5826: checking for inttypes.h configure:5826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5826: $? = 0 configure:5826: result: yes configure:5826: checking for stdint.h configure:5826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5826: $? = 0 configure:5826: result: yes configure:5826: checking for unistd.h configure:5826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5826: $? = 0 configure:5826: result: yes configure:5839: checking minix/config.h usability configure:5839: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:60:10: fatal error: 'minix/config.h' file not found #include ^ 1 error generated. configure:5839: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:5839: result: no configure:5839: checking minix/config.h presence configure:5839: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:27:10: fatal error: 'minix/config.h' file not found #include ^ 1 error generated. configure:5839: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include configure:5839: result: no configure:5839: checking for minix/config.h configure:5839: result: no configure:5860: checking whether it is safe to define __EXTENSIONS__ configure:5878: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5878: $? = 0 configure:5885: result: yes configure:5901: checking for C compiler vendor configure:5971: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:38:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:5971: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__ICC) || defined(__ECC) || defined(__INTEL_COMPILER)) | chokeonthis | #endif | | ; | return 0; | } configure:5971: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:38:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:5971: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__xlc__) || defined(__xlC__) || defined(__IBMC__) || defined(__IBMCPP__)) | chokeonthis | #endif | | ; | return 0; | } configure:5971: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:38:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:5971: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__PATHCC__) || defined(__PATHSCALE__)) | chokeonthis | #endif | | ; | return 0; | } configure:5971: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:38:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:5971: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__OPEN64__)) | chokeonthis | #endif | | ; | return 0; | } configure:5971: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:38:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:5971: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(_CRAYC) || defined(_ADDR64)) | chokeonthis | #endif | | ; | return 0; | } configure:5971: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:5971: $? = 0 configure:5980: result: gnu configure:6059: checking for perl configure:6077: found /usr/bin/perl configure:6089: result: /usr/bin/perl configure:6168: checking for base mpicc compiler configure:6205: gcc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:6205: $? = 0 configure:6352: result: gcc configure:6534: checking whether a simple C MPI program compiles configure:6540: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6540: $? = 0 configure:6548: result: yes configure:6826: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:6826: $? = 0 configure:6826: ./conftest configure:6826: $? = 0 configure:6830: checking for TARGET 64bit-ness configure:6841: result: LINUX64 configure:6875: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:6875: $? = 0 configure:6875: ./conftest configure:6875: $? = 0 configure:11055: searching for external ARMCI... configure:11062: checking armci.h usability configure:11062: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include conftest.c >&5 configure:11062: $? = 0 configure:11062: result: yes configure:11062: checking armci.h presence configure:11062: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include conftest.c configure:11062: $? = 0 configure:11062: result: yes configure:11062: checking for armci.h configure:11062: result: yes configure:11072: checking for library containing ARMCI_Init configure:11103: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c >&5 /tmp/conftest-1055e1.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:44: undefined reference to `ARMCI_Init' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11103: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char ARMCI_Init (); | int | main () | { | return ARMCI_Init (); | ; | return 0; | } configure:11103: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci >&5 configure:11103: $? = 0 configure:11120: result: -larmci configure:11146: checking for library containing armci_group_comm configure:11177: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci >&5 /tmp/conftest-beceb8.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:44: undefined reference to `armci_group_comm' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11177: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_group_comm (); | int | main () | { | return armci_group_comm (); | ; | return 0; | } configure:11177: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci -larmci >&5 /tmp/conftest-e4b647.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:44: undefined reference to `armci_group_comm' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11177: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_group_comm (); | int | main () | { | return armci_group_comm (); | ; | return 0; | } configure:11194: result: no configure:11215: checking for ARMCI_Group.comm configure:11215: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include conftest.c >&5 configure:11215: $? = 0 configure:11215: result: yes configure:11234: checking for library containing ARMCI_Initialized configure:11265: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci >&5 configure:11265: $? = 0 configure:11282: result: none required configure:11303: checking for library containing armci_stride_info_init configure:11334: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci >&5 /tmp/conftest-72e20f.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:47: undefined reference to `armci_stride_info_init' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11334: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_stride_info_init (); | int | main () | { | return armci_stride_info_init (); | ; | return 0; | } configure:11334: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci -larmci >&5 /tmp/conftest-08e3fc.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:47: undefined reference to `armci_stride_info_init' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11334: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_stride_info_init (); | int | main () | { | return armci_stride_info_init (); | ; | return 0; | } configure:11351: result: no configure:11372: checking for library containing armci_notify configure:11403: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci >&5 /tmp/conftest-969e1a.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:48: undefined reference to `armci_notify' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11403: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_notify (); | int | main () | { | return armci_notify (); | ; | return 0; | } configure:11403: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci -larmci >&5 /tmp/conftest-ece13b.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:48: undefined reference to `armci_notify' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11403: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_notify (); | int | main () | { | return armci_notify (); | ; | return 0; | } configure:11420: result: no configure:11441: checking for library containing armci_msg_init configure:11472: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci >&5 /tmp/conftest-94161e.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:49: undefined reference to `armci_msg_init' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11472: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_msg_init (); | int | main () | { | return armci_msg_init (); | ; | return 0; | } configure:11472: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci -larmci >&5 /tmp/conftest-4da2fb.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:49: undefined reference to `armci_msg_init' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11472: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_msg_init (); | int | main () | { | return armci_msg_init (); | ; | return 0; | } configure:11489: result: no configure:11510: checking for library containing armci_msg_finalize configure:11541: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci >&5 /tmp/conftest-fb78e2.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:50: undefined reference to `armci_msg_finalize' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11541: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_msg_finalize (); | int | main () | { | return armci_msg_finalize (); | ; | return 0; | } configure:11541: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -Wl,-z,relro -L/usr/lib conftest.c -larmci -larmci >&5 /tmp/conftest-a4b8f6.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:50: undefined reference to `armci_msg_finalize' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:11541: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char armci_msg_finalize (); | int | main () | { | return armci_msg_finalize (); | ; | return 0; | } configure:11558: result: no configure:13550: checking whether to enable assertions configure:13568: result: yes configure:13574: checking for dirent.h that defines DIR configure:13593: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:13593: $? = 0 configure:13601: result: yes configure:13614: checking for library containing opendir configure:13645: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:13645: $? = 0 configure:13662: result: none required configure:13729: checking for stdbool.h that conforms to C99 configure:13796: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:91:24: warning: address of 's' will always evaluate to 'true' [-Wpointer-bool-conversion] bool e = &s; ~ ^ conftest.c:95:23: warning: address of array 'a' will always evaluate to 'true' [-Wpointer-bool-conversion] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ~^ conftest.c:95:28: warning: address of array 'b' will always evaluate to 'true' [-Wpointer-bool-conversion] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ~^ conftest.c:95:33: warning: address of array 'c' will always evaluate to 'true' [-Wpointer-bool-conversion] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ~^ conftest.c:95:38: warning: address of array 'd' will always evaluate to 'true' [-Wpointer-bool-conversion] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ~^ conftest.c:95:48: warning: address of array 'f' will always evaluate to 'true' [-Wpointer-bool-conversion] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ~^ conftest.c:95:53: warning: address of array 'g' will always evaluate to 'true' [-Wpointer-bool-conversion] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ~^ conftest.c:95:58: warning: address of array 'h' will always evaluate to 'true' [-Wpointer-bool-conversion] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ~^ conftest.c:95:63: warning: address of array 'i' will always evaluate to 'true' [-Wpointer-bool-conversion] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ~^ conftest.c:96:30: warning: address of array 'n' will always evaluate to 'true' [-Wpointer-bool-conversion] ~^ conftest.c:96:35: warning: address of array 'o' will always evaluate to 'true' [-Wpointer-bool-conversion] ~^ conftest.c:96:40: warning: address of array 'p' will always evaluate to 'true' [-Wpointer-bool-conversion] ~^ 12 warnings generated. configure:13796: $? = 0 configure:13803: result: yes configure:13805: checking for _Bool configure:13805: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:13805: $? = 0 configure:13805: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:78:20: error: expected expression if (sizeof ((_Bool))) ^ 1 error generated. configure:13805: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((_Bool))) | return 0; | ; | return 0; | } configure:13805: result: yes configure:13822: checking for ANSI C header files configure:13926: result: yes configure:13934: checking for sys/wait.h that is POSIX.1 compatible configure:13960: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:13960: $? = 0 configure:13967: result: yes configure:13977: checking assert.h usability configure:13977: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:13977: $? = 0 configure:13977: result: yes configure:13977: checking assert.h presence configure:13977: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:13977: $? = 0 configure:13977: result: yes configure:13977: checking for assert.h configure:13977: result: yes configure:13996: checking errno.h usability configure:13996: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:13996: $? = 0 configure:13996: result: yes configure:13996: checking errno.h presence configure:13996: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:13996: $? = 0 configure:13996: result: yes configure:13996: checking for errno.h configure:13996: result: yes configure:14015: checking fcntl.h usability configure:14015: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14015: $? = 0 configure:14015: result: yes configure:14015: checking fcntl.h presence configure:14015: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14015: $? = 0 configure:14015: result: yes configure:14015: checking for fcntl.h configure:14015: result: yes configure:14034: checking ffio.h usability configure:14034: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:82:10: fatal error: 'ffio.h' file not found #include ^ 1 error generated. configure:14034: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:14034: result: no configure:14034: checking ffio.h presence configure:14034: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:49:10: fatal error: 'ffio.h' file not found #include ^ 1 error generated. configure:14034: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | /* end confdefs.h. */ | #include configure:14034: result: no configure:14034: checking for ffio.h configure:14034: result: no configure:14053: checking limits.h usability configure:14053: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14053: $? = 0 configure:14053: result: yes configure:14053: checking limits.h presence configure:14053: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14053: $? = 0 configure:14053: result: yes configure:14053: checking for limits.h configure:14053: result: yes configure:14072: checking linux/limits.h usability configure:14072: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14072: $? = 0 configure:14072: result: yes configure:14072: checking linux/limits.h presence configure:14072: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14072: $? = 0 configure:14072: result: yes configure:14072: checking for linux/limits.h configure:14072: result: yes configure:14091: checking malloc.h usability configure:14091: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14091: $? = 0 configure:14091: result: yes configure:14091: checking malloc.h presence configure:14091: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14091: $? = 0 configure:14091: result: yes configure:14091: checking for malloc.h configure:14091: result: yes configure:14110: checking math.h usability configure:14110: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14110: $? = 0 configure:14110: result: yes configure:14110: checking math.h presence configure:14110: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14110: $? = 0 configure:14110: result: yes configure:14110: checking for math.h configure:14110: result: yes configure:14129: checking stddef.h usability configure:14129: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14129: $? = 0 configure:14129: result: yes configure:14129: checking stddef.h presence configure:14129: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14129: $? = 0 configure:14129: result: yes configure:14129: checking for stddef.h configure:14129: result: yes configure:14148: checking for stdint.h configure:14148: result: yes configure:14167: checking stdio.h usability configure:14167: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14167: $? = 0 configure:14167: result: yes configure:14167: checking stdio.h presence configure:14167: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14167: $? = 0 configure:14167: result: yes configure:14167: checking for stdio.h configure:14167: result: yes configure:14186: checking for stdlib.h configure:14186: result: yes configure:14205: checking for string.h configure:14205: result: yes configure:14224: checking for strings.h configure:14224: result: yes configure:14243: checking sys/file.h usability configure:14243: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14243: $? = 0 configure:14243: result: yes configure:14243: checking sys/file.h presence configure:14243: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14243: $? = 0 configure:14243: result: yes configure:14243: checking for sys/file.h configure:14243: result: yes configure:14262: checking sys/fsid.h usability configure:14262: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:94:10: fatal error: 'sys/fsid.h' file not found #include ^ 1 error generated. configure:14262: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:14262: result: no configure:14262: checking sys/fsid.h presence configure:14262: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:61:10: fatal error: 'sys/fsid.h' file not found #include ^ 1 error generated. configure:14262: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | /* end confdefs.h. */ | #include configure:14262: result: no configure:14262: checking for sys/fsid.h configure:14262: result: no configure:14281: checking sys/fstyp.h usability configure:14281: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:95:10: fatal error: 'sys/fstyp.h' file not found #include ^ 1 error generated. configure:14281: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:14281: result: no configure:14281: checking sys/fstyp.h presence configure:14281: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:62:10: fatal error: 'sys/fstyp.h' file not found #include ^ 1 error generated. configure:14281: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | /* end confdefs.h. */ | #include configure:14281: result: no configure:14281: checking for sys/fstyp.h configure:14281: result: no configure:14300: checking sys/ioctl.h usability configure:14300: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14300: $? = 0 configure:14300: result: yes configure:14300: checking sys/ioctl.h presence configure:14300: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14300: $? = 0 configure:14300: result: yes configure:14300: checking for sys/ioctl.h configure:14300: result: yes configure:14319: checking sys/iosw.h usability configure:14319: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:97:10: fatal error: 'sys/iosw.h' file not found #include ^ 1 error generated. configure:14319: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:14319: result: no configure:14319: checking sys/iosw.h presence configure:14319: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:64:10: fatal error: 'sys/iosw.h' file not found #include ^ 1 error generated. configure:14319: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | /* end confdefs.h. */ | #include configure:14319: result: no configure:14319: checking for sys/iosw.h configure:14319: result: no configure:14338: checking sys/ipc.h usability configure:14338: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14338: $? = 0 configure:14338: result: yes configure:14338: checking sys/ipc.h presence configure:14338: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14338: $? = 0 configure:14338: result: yes configure:14338: checking for sys/ipc.h configure:14338: result: yes configure:14357: checking sys/mman.h usability configure:14357: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14357: $? = 0 configure:14357: result: yes configure:14357: checking sys/mman.h presence configure:14357: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14357: $? = 0 configure:14357: result: yes configure:14357: checking for sys/mman.h configure:14357: result: yes configure:14376: checking sys/mount.h usability configure:14376: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14376: $? = 0 configure:14376: result: yes configure:14376: checking sys/mount.h presence configure:14376: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14376: $? = 0 configure:14376: result: yes configure:14376: checking for sys/mount.h configure:14376: result: yes configure:14395: checking sys/param.h usability configure:14395: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14395: $? = 0 configure:14395: result: yes configure:14395: checking sys/param.h presence configure:14395: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14395: $? = 0 configure:14395: result: yes configure:14395: checking for sys/param.h configure:14395: result: yes configure:14414: checking sys/sem.h usability configure:14414: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14414: $? = 0 configure:14414: result: yes configure:14414: checking sys/sem.h presence configure:14414: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14414: $? = 0 configure:14414: result: yes configure:14414: checking for sys/sem.h configure:14414: result: yes configure:14433: checking sys/shm.h usability configure:14433: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14433: $? = 0 configure:14433: result: yes configure:14433: checking sys/shm.h presence configure:14433: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14433: $? = 0 configure:14433: result: yes configure:14433: checking for sys/shm.h configure:14433: result: yes configure:14452: checking sys/statfs.h usability configure:14452: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14452: $? = 0 configure:14452: result: yes configure:14452: checking sys/statfs.h presence configure:14452: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14452: $? = 0 configure:14452: result: yes configure:14452: checking for sys/statfs.h configure:14452: result: yes configure:14471: checking for sys/stat.h configure:14471: result: yes configure:14490: checking sys/statvfs.h usability configure:14490: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14490: $? = 0 configure:14490: result: yes configure:14490: checking sys/statvfs.h presence configure:14490: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14490: $? = 0 configure:14490: result: yes configure:14490: checking for sys/statvfs.h configure:14490: result: yes configure:14509: checking sys/time.h usability configure:14509: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14509: $? = 0 configure:14509: result: yes configure:14509: checking sys/time.h presence configure:14509: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14509: $? = 0 configure:14509: result: yes configure:14509: checking for sys/time.h configure:14509: result: yes configure:14528: checking for sys/types.h configure:14528: result: yes configure:14547: checking sys/vfs.h usability configure:14547: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14547: $? = 0 configure:14547: result: yes configure:14547: checking sys/vfs.h presence configure:14547: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14547: $? = 0 configure:14547: result: yes configure:14547: checking for sys/vfs.h configure:14547: result: yes configure:14566: checking time.h usability configure:14566: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14566: $? = 0 configure:14566: result: yes configure:14566: checking time.h presence configure:14566: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:14566: $? = 0 configure:14566: result: yes configure:14566: checking for time.h configure:14566: result: yes configure:14585: checking for unistd.h configure:14585: result: yes configure:14604: checking windows.h usability configure:14604: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:112:10: fatal error: 'windows.h' file not found #include ^ 1 error generated. configure:14604: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:14604: result: no configure:14604: checking windows.h presence configure:14604: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:79:10: fatal error: 'windows.h' file not found #include ^ 1 error generated. configure:14604: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include configure:14604: result: no configure:14604: checking for windows.h configure:14604: result: no configure:14623: checking for an ANSI C-conforming const configure:14689: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14689: $? = 0 configure:14696: result: yes configure:14704: checking for inline configure:14720: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14720: $? = 0 configure:14728: result: inline configure:14746: checking for C/C++ restrict keyword configure:14771: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14771: $? = 0 configure:14779: result: __restrict configure:14792: checking for working volatile configure:14811: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14811: $? = 0 configure:14818: result: yes configure:14826: checking for int64_t configure:14826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14826: $? = 0 configure:14826: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:118:24: error: 'test_array' declared as an array with a negative size static int test_array [1 - 2 * !((int64_t) (((((int64_t) 1 << N) << N) - 1) * 2 + 1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 error generated. configure:14826: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | enum { N = 64 / 2 - 1 }; | int | main () | { | static int test_array [1 - 2 * !((int64_t) (((((int64_t) 1 << N) << N) - 1) * 2 + 1) | < (int64_t) (((((int64_t) 1 << N) << N) - 1) * 2 + 2))]; | test_array [0] = 0; | return test_array [0]; | | ; | return 0; | } configure:14826: result: yes configure:14838: checking for long double configure:14871: result: yes configure:14879: checking for off_t configure:14879: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14879: $? = 0 configure:14879: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:118:20: error: expected expression if (sizeof ((off_t))) ^ 1 error generated. configure:14879: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:14879: result: yes configure:14890: checking for pid_t configure:14890: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14890: $? = 0 configure:14890: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:118:20: error: expected expression if (sizeof ((pid_t))) ^ 1 error generated. configure:14890: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((pid_t))) | return 0; | ; | return 0; | } configure:14890: result: yes configure:14901: checking return type of signal handlers configure:14919: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:88:8: error: indirection requires pointer operand ('void' invalid) return *(signal (0, 0)) (0) == 1; ^~~~~~~~~~~~~~~~~~~~ 1 error generated. configure:14919: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | /* end confdefs.h. */ | #include | #include | | int | main () | { | return *(signal (0, 0)) (0) == 1; | ; | return 0; | } configure:14926: result: void configure:14934: checking for size_t configure:14934: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:14934: $? = 0 configure:14934: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:119:21: error: expected expression if (sizeof ((size_t))) ^ 1 error generated. configure:14934: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:14934: result: yes configure:14952: checking for special C compiler options needed for large files configure:14997: result: no configure:15003: checking for _FILE_OFFSET_BITS value needed for large files configure:15028: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:15028: $? = 0 configure:15060: result: no configure:15145: checking for _LARGEFILE_SOURCE value needed for large files configure:15164: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15164: $? = 0 configure:15192: result: no configure:15213: checking for preprocessor symbol for function name configure:15230: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:15230: $? = 0 configure:15256: result: __func__ configure:15264: checking for C global variable containing the name of the program configure:15291: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15291: $? = 0 configure:15305: result: __progname configure:15339: checking whether mpicc supports #pragma weak configure:15362: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 conftest.c:95:1: error: call to 'weakf' is ambiguous weakf(0) ^~~~~ conftest.c:89:13: note: candidate function extern void weakf(int c); ^ conftest.c:90:14: note: candidate function #pragma weak weakf = __weakf ^ 1 error generated. configure:15362: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | /* end confdefs.h. */ | | | extern void weakf(int c); | #pragma weak weakf = __weakf | void __weakf(int c) {} | int | main () | { | weakf(0) | ; | return 0; | } configure:15371: result: no configure:15406: checking for union semun in sys/sem.h configure:15425: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:93:13: error: variable has incomplete type 'union semun' union semun arg; ^ conftest.c:93:7: note: forward declaration of 'union semun' union semun arg; ^ 1 error generated. configure:15425: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | /* end confdefs.h. */ | #include | #include | #include | int | main () | { | union semun arg; | semctl(0, 0, 0, arg); | ; | return 0; | } configure:15432: result: no configure:15441: checking for -fno-aggressive-loop-optimizations support in C compiler configure:15464: mpicc -o conftest -g -O2 -fno-aggressive-loop-optimizations -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 clang: error: unknown argument: '-fno-aggressive-loop-optimizations' configure:15464: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:15473: result: configure:15484: checking size of void* configure:15489: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15489: $? = 0 configure:15489: ./conftest configure:15489: $? = 0 configure:15503: result: 8 configure:15517: checking size of char configure:15522: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15522: $? = 0 configure:15522: ./conftest configure:15522: $? = 0 configure:15536: result: 1 configure:15550: checking size of short configure:15555: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15555: $? = 0 configure:15555: ./conftest configure:15555: $? = 0 configure:15569: result: 2 configure:15583: checking size of int configure:15588: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15588: $? = 0 configure:15588: ./conftest configure:15588: $? = 0 configure:15602: result: 4 configure:15616: checking size of long configure:15621: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15621: $? = 0 configure:15621: ./conftest configure:15621: $? = 0 configure:15635: result: 8 configure:15649: checking size of long long configure:15654: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15654: $? = 0 configure:15654: ./conftest configure:15654: $? = 0 configure:15668: result: 8 configure:15682: checking size of float configure:15687: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15687: $? = 0 configure:15687: ./conftest configure:15687: $? = 0 configure:15701: result: 4 configure:15715: checking size of double configure:15720: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15720: $? = 0 configure:15720: ./conftest configure:15720: $? = 0 configure:15734: result: 8 configure:15749: checking size of long double configure:15754: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15754: $? = 0 configure:15754: ./conftest configure:15754: $? = 0 configure:15768: result: 16 configure:15779: checking for smallest C integer matching void* configure:15796: result: long configure:15805: checking vfork.h usability configure:15805: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c:129:10: fatal error: 'vfork.h' file not found #include ^ 1 error generated. configure:15805: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:15805: result: no configure:15805: checking vfork.h presence configure:15805: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:96:10: fatal error: 'vfork.h' file not found #include ^ 1 error generated. configure:15805: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | /* end confdefs.h. */ | #include configure:15805: result: no configure:15805: checking for vfork.h configure:15805: result: no configure:15818: checking for fork configure:15818: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15818: $? = 0 configure:15818: result: yes configure:15818: checking for vfork configure:15818: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 conftest.c:120:6: warning: incompatible redeclaration of library function 'vfork' [-Wincompatible-library-redeclaration] char vfork (); ^ conftest.c:120:6: note: 'vfork' is a builtin with type 'int (void)' 1 warning generated. configure:15818: $? = 0 configure:15818: result: yes configure:15828: checking for working fork configure:15850: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:15850: $? = 0 configure:15850: ./conftest configure:15850: $? = 0 configure:15860: result: yes configure:15881: checking for working vfork configure:15991: result: yes configure:16022: checking for stdlib.h configure:16022: result: yes configure:16022: checking for unistd.h configure:16022: result: yes configure:16022: checking for sys/param.h configure:16022: result: yes configure:16042: checking for getpagesize configure:16042: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:16042: $? = 0 configure:16042: result: yes configure:16051: checking for working mmap configure:16198: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 configure:16198: $? = 0 configure:16198: ./conftest configure:16198: $? = 0 configure:16208: result: yes configure:16220: checking sys/select.h usability configure:16220: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:16220: $? = 0 configure:16220: result: yes configure:16220: checking sys/select.h presence configure:16220: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:16220: $? = 0 configure:16220: result: yes configure:16220: checking for sys/select.h configure:16220: result: yes configure:16220: checking sys/socket.h usability configure:16220: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:16220: $? = 0 configure:16220: result: yes configure:16220: checking sys/socket.h presence configure:16220: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:16220: $? = 0 configure:16220: result: yes configure:16220: checking for sys/socket.h configure:16220: result: yes configure:16230: checking types of arguments for select configure:16258: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:16258: $? = 0 configure:16269: result: int,fd_set *,struct timeval * configure:16292: checking for library containing floor configure:16323: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c >&5 conftest.c:117:6: warning: incompatible redeclaration of library function 'floor' [-Wincompatible-library-redeclaration] char floor (); ^ conftest.c:117:6: note: 'floor' is a builtin with type 'double (double)' 1 warning generated. /usr/bin/ld: /tmp/conftest-04aff5.o: undefined reference to symbol 'floor@@GLIBC_2.2.5' //lib/x86_64-linux-gnu/libm.so.6: error adding symbols: DSO missing from command line clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:16323: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char floor (); | int | main () | { | return floor (); | ; | return 0; | } configure:16323: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:117:6: warning: incompatible redeclaration of library function 'floor' [-Wincompatible-library-redeclaration] char floor (); ^ conftest.c:117:6: note: 'floor' is a builtin with type 'double (double)' 1 warning generated. configure:16323: $? = 0 configure:16340: result: -lm configure:16355: checking for library containing modf configure:16386: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:118:6: warning: incompatible redeclaration of library function 'modf' [-Wincompatible-library-redeclaration] char modf (); ^ conftest.c:118:6: note: 'modf' is a builtin with type 'double (double, double *)' 1 warning generated. configure:16386: $? = 0 configure:16403: result: none required configure:16418: checking for library containing pow configure:16449: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:119:6: warning: incompatible redeclaration of library function 'pow' [-Wincompatible-library-redeclaration] char pow (); ^ conftest.c:119:6: note: 'pow' is a builtin with type 'double (double, double)' 1 warning generated. configure:16449: $? = 0 configure:16466: result: none required configure:16481: checking for library containing sqrt configure:16512: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:120:6: warning: incompatible redeclaration of library function 'sqrt' [-Wincompatible-library-redeclaration] char sqrt (); ^ conftest.c:120:6: note: 'sqrt' is a builtin with type 'double (double)' 1 warning generated. configure:16512: $? = 0 configure:16529: result: none required configure:16544: checking for library containing hypot configure:16575: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:121:6: warning: incompatible redeclaration of library function 'hypot' [-Wincompatible-library-redeclaration] char hypot (); ^ conftest.c:121:6: note: 'hypot' is a builtin with type 'double (double, double)' 1 warning generated. configure:16575: $? = 0 configure:16592: result: none required configure:16609: checking for bcopy configure:16609: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16609: $? = 0 configure:16609: result: yes configure:16627: checking for bzero configure:16627: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:139:6: warning: incompatible redeclaration of library function 'bzero' [-Wincompatible-library-redeclaration] char bzero (); ^ conftest.c:139:6: note: 'bzero' is a builtin with type 'void (void *, unsigned long)' 1 warning generated. configure:16627: $? = 0 configure:16627: result: yes configure:16645: checking for create_shared_region configure:16645: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 /tmp/conftest-4aaf91.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:151: undefined reference to `create_shared_region' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:16645: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | /* end confdefs.h. */ | /* Define create_shared_region to an innocuous variant, in case declares create_shared_region. | For example, HP-UX 11i declares gettimeofday. */ | #define create_shared_region innocuous_create_shared_region | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char create_shared_region (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef create_shared_region | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char create_shared_region (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_create_shared_region || defined __stub___create_shared_region | choke me | #endif | | int | main () | { | return create_shared_region (); | ; | return 0; | } configure:16645: result: no configure:16663: checking for ftruncate configure:16663: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16663: $? = 0 configure:16663: result: yes configure:16681: checking for gethostbyname configure:16681: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16681: $? = 0 configure:16681: result: yes configure:16699: checking for gethostname configure:16699: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16699: $? = 0 configure:16699: result: yes configure:16717: checking for getpagesize configure:16717: result: yes configure:16735: checking for gettimeofday configure:16735: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16735: $? = 0 configure:16735: result: yes configure:16753: checking for memalign configure:16753: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16753: $? = 0 configure:16753: result: yes configure:16771: checking for memcpy configure:16771: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:147:6: warning: incompatible redeclaration of library function 'memcpy' [-Wincompatible-library-redeclaration] char memcpy (); ^ conftest.c:147:6: note: 'memcpy' is a builtin with type 'void *(void *, const void *, unsigned long)' 1 warning generated. configure:16771: $? = 0 configure:16771: result: yes configure:16789: checking for memset configure:16789: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:148:6: warning: incompatible redeclaration of library function 'memset' [-Wincompatible-library-redeclaration] char memset (); ^ conftest.c:148:6: note: 'memset' is a builtin with type 'void *(void *, int, unsigned long)' 1 warning generated. configure:16789: $? = 0 configure:16789: result: yes configure:16807: checking for munmap configure:16807: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16807: $? = 0 configure:16807: result: yes configure:16825: checking for pause configure:16825: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16825: $? = 0 configure:16825: result: yes configure:16843: checking for posix_memalign configure:16843: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16843: $? = 0 configure:16843: result: yes configure:16861: checking for putenv configure:16861: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16861: $? = 0 configure:16861: result: yes configure:16879: checking for select configure:16879: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16879: $? = 0 configure:16879: result: yes configure:16897: checking for setenv configure:16897: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16897: $? = 0 configure:16897: result: yes configure:16915: checking for shared_malloc configure:16915: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 /tmp/conftest-dbb10a.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:166: undefined reference to `shared_malloc' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:16915: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | #define HAVE_CREATE_SHARED_REGION 0 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETHOSTBYNAME 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MEMALIGN 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMSET 1 | #define HAVE_MUNMAP 1 | #define HAVE_PAUSE 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_PUTENV 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | /* end confdefs.h. */ | /* Define shared_malloc to an innocuous variant, in case declares shared_malloc. | For example, HP-UX 11i declares gettimeofday. */ | #define shared_malloc innocuous_shared_malloc | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char shared_malloc (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef shared_malloc | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char shared_malloc (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_shared_malloc || defined __stub___shared_malloc | choke me | #endif | | int | main () | { | return shared_malloc (); | ; | return 0; | } configure:16915: result: no configure:16933: checking for shmalloc configure:16933: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 /tmp/conftest-728b51.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:167: undefined reference to `shmalloc' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:16933: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | #define HAVE_CREATE_SHARED_REGION 0 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETHOSTBYNAME 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MEMALIGN 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMSET 1 | #define HAVE_MUNMAP 1 | #define HAVE_PAUSE 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_PUTENV 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_SHARED_MALLOC 0 | /* end confdefs.h. */ | /* Define shmalloc to an innocuous variant, in case declares shmalloc. | For example, HP-UX 11i declares gettimeofday. */ | #define shmalloc innocuous_shmalloc | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char shmalloc (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef shmalloc | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char shmalloc (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_shmalloc || defined __stub___shmalloc | choke me | #endif | | int | main () | { | return shmalloc (); | ; | return 0; | } configure:16933: result: no configure:16951: checking for socket configure:16951: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16951: $? = 0 configure:16951: result: yes configure:16969: checking for srand configure:16969: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16969: $? = 0 configure:16969: result: yes configure:16987: checking for srandom configure:16987: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:16987: $? = 0 configure:16987: result: yes configure:17005: checking for strchr configure:17005: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:160:6: warning: incompatible redeclaration of library function 'strchr' [-Wincompatible-library-redeclaration] char strchr (); ^ conftest.c:160:6: note: 'strchr' is a builtin with type 'char *(const char *, int)' 1 warning generated. configure:17005: $? = 0 configure:17005: result: yes configure:17023: checking for strdup configure:17023: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:161:6: warning: incompatible redeclaration of library function 'strdup' [-Wincompatible-library-redeclaration] char strdup (); ^ conftest.c:161:6: note: 'strdup' is a builtin with type 'char *(const char *)' 1 warning generated. configure:17023: $? = 0 configure:17023: result: yes configure:17041: checking for strerror configure:17041: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:162:6: warning: incompatible redeclaration of library function 'strerror' [-Wincompatible-library-redeclaration] char strerror (); ^ conftest.c:162:6: note: 'strerror' is a builtin with type 'char *(int)' 1 warning generated. configure:17041: $? = 0 configure:17041: result: yes configure:17059: checking for strstr configure:17059: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 conftest.c:163:6: warning: incompatible redeclaration of library function 'strstr' [-Wincompatible-library-redeclaration] char strstr (); ^ conftest.c:163:6: note: 'strstr' is a builtin with type 'char *(const char *, const char *)' 1 warning generated. configure:17059: $? = 0 configure:17059: result: yes configure:17077: checking for strtol configure:17077: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:17077: $? = 0 configure:17077: result: yes configure:17095: checking for openpl in -lplot configure:17120: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lplot -lm >&5 /usr/bin/ld: cannot find -lplot clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:17120: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | #define HAVE_CREATE_SHARED_REGION 0 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETHOSTBYNAME 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MEMALIGN 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMSET 1 | #define HAVE_MUNMAP 1 | #define HAVE_PAUSE 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_PUTENV 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_SHARED_MALLOC 0 | #define HAVE_SHMALLOC 0 | #define HAVE_SOCKET 1 | #define HAVE_SRAND 1 | #define HAVE_SRANDOM 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_STRSTR 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char openpl (); | int | main () | { | return openpl (); | ; | return 0; | } configure:17129: result: no configure:17145: checking for specific C optimizations configure:17247: result: configure:17258: configure:17261: C++ compiler configure:17267: configure:17387: checking for mpic++ configure:17403: found /usr/bin/mpic++ configure:17414: result: mpic++ configure:17441: checking for C++ compiler version configure:17450: mpic++ --version >&5 clang version 3.9.1-10 (tags/RELEASE_391/rc2) Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin configure:17461: $? = 0 configure:17450: mpic++ -v >&5 clang version 3.9.1-10 (tags/RELEASE_391/rc2) Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/6 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/6.4.0 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/7 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.1.0 Found candidate GCC installation: /usr/lib/gcc/x86_64-linux-gnu/6 Found candidate GCC installation: /usr/lib/gcc/x86_64-linux-gnu/6.4.0 ... rest of stderr output deleted ... configure:17461: $? = 0 configure:17450: mpic++ -V >&5 clang: error: argument to '-V' is missing (expected 1 value) clang: error: no input files configure:17461: $? = 1 configure:17450: mpic++ -qversion >&5 clang: error: unknown argument: '-qversion' clang: error: no input files configure:17461: $? = 1 configure:17465: checking whether we are using the GNU C++ compiler configure:17484: mpic++ -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:17484: $? = 0 configure:17493: result: yes configure:17502: checking whether mpic++ accepts -g configure:17522: mpic++ -c -g -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:17522: $? = 0 configure:17563: result: yes configure:17588: checking dependency style of mpic++ configure:17699: result: none configure:17722: checking for perl configure:17752: result: /usr/bin/perl configure:17831: checking for base mpic++ compiler configure:17868: g++ -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.cpp -lm >&5 configure:17868: $? = 0 configure:18015: result: g++ configure:18036: checking for C++ compiler vendor configure:18106: mpic++ -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 conftest.cpp:148:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:18106: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | #define HAVE_CREATE_SHARED_REGION 0 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETHOSTBYNAME 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MEMALIGN 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMSET 1 | #define HAVE_MUNMAP 1 | #define HAVE_PAUSE 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_PUTENV 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_SHARED_MALLOC 0 | #define HAVE_SHMALLOC 0 | #define HAVE_SOCKET 1 | #define HAVE_SRAND 1 | #define HAVE_SRANDOM 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_STRSTR 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__ICC) || defined(__ECC) || defined(__INTEL_COMPILER)) | chokeonthis | #endif | | ; | return 0; | } configure:18106: mpic++ -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 conftest.cpp:148:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:18106: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | #define HAVE_CREATE_SHARED_REGION 0 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETHOSTBYNAME 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MEMALIGN 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMSET 1 | #define HAVE_MUNMAP 1 | #define HAVE_PAUSE 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_PUTENV 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_SHARED_MALLOC 0 | #define HAVE_SHMALLOC 0 | #define HAVE_SOCKET 1 | #define HAVE_SRAND 1 | #define HAVE_SRANDOM 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_STRSTR 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__xlc__) || defined(__xlC__) || defined(__IBMC__) || defined(__IBMCPP__)) | chokeonthis | #endif | | ; | return 0; | } configure:18106: mpic++ -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 conftest.cpp:148:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:18106: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | #define HAVE_CREATE_SHARED_REGION 0 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETHOSTBYNAME 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MEMALIGN 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMSET 1 | #define HAVE_MUNMAP 1 | #define HAVE_PAUSE 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_PUTENV 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_SHARED_MALLOC 0 | #define HAVE_SHMALLOC 0 | #define HAVE_SOCKET 1 | #define HAVE_SRAND 1 | #define HAVE_SRANDOM 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_STRSTR 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__PATHCC__) || defined(__PATHSCALE__)) | chokeonthis | #endif | | ; | return 0; | } configure:18106: mpic++ -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 conftest.cpp:148:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:18106: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | #define HAVE_CREATE_SHARED_REGION 0 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETHOSTBYNAME 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MEMALIGN 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMSET 1 | #define HAVE_MUNMAP 1 | #define HAVE_PAUSE 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_PUTENV 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_SHARED_MALLOC 0 | #define HAVE_SHMALLOC 0 | #define HAVE_SOCKET 1 | #define HAVE_SRAND 1 | #define HAVE_SRANDOM 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_STRSTR 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__OPEN64__)) | chokeonthis | #endif | | ; | return 0; | } configure:18106: mpic++ -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 conftest.cpp:148:5: error: use of undeclared identifier 'chokeonthis' chokeonthis ^ 1 error generated. configure:18106: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | #define HAVE_CREATE_SHARED_REGION 0 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETHOSTBYNAME 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MEMALIGN 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMSET 1 | #define HAVE_MUNMAP 1 | #define HAVE_PAUSE 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_PUTENV 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_SHARED_MALLOC 0 | #define HAVE_SHMALLOC 0 | #define HAVE_SOCKET 1 | #define HAVE_SRAND 1 | #define HAVE_SRANDOM 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_STRSTR 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(_CRAYC) || defined(_ADDR64)) | chokeonthis | #endif | | ; | return 0; | } configure:18106: mpic++ -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:18106: $? = 0 configure:18115: result: gnu configure:18158: checking whether a simple C++ MPI program works configure:18175: mpic++ -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.cpp -lm >&5 configure:18175: $? = 0 configure:18247: result: yes configure:18276: checking whether the compiler implements namespaces configure:18298: mpic++ -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:18298: $? = 0 configure:18311: result: yes configure:18328: checking for specific C++ optimizations configure:18354: result: configure:18385: configure:18387: Assembler configure:18389: configure:18421: checking dependency style of mpicc configure:18530: result: none configure:18549: configure:18552: Fortran compiler configure:18558: configure:18687: checking for mpif95 configure:18717: result: no configure:18687: checking for mpxlf95_r configure:18717: result: no configure:18687: checking for mpxlf95 configure:18717: result: no configure:18687: checking for ftn configure:18717: result: no configure:18687: checking for mpif90 configure:18703: found /usr/bin/mpif90 configure:18714: result: mpif90 configure:18740: checking for Fortran 77 compiler version configure:18749: mpif90 --version >&5 GNU Fortran (Debian 6.4.0-1) 6.4.0 20170704 Copyright (C) 2017 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:18760: $? = 0 configure:18749: mpif90 -v >&5 Using built-in specs. COLLECT_GCC=/usr/bin/gfortran COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/6/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 6.4.0-1' --with-bugurl=file:///usr/share/doc/gcc-6/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-6 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --enable-default-pie --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-6-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-6-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-6-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-target-system-zlib --enable-objc-gc=auto --enable-multiarch --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 6.4.0 20170704 (Debian 6.4.0-1) configure:18760: $? = 0 configure:18749: mpif90 -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:18760: $? = 1 configure:18749: mpif90 -qversion >&5 gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'? gfortran: fatal error: no input files compilation terminated. configure:18760: $? = 1 configure:18769: checking whether we are using the GNU Fortran 77 compiler configure:18782: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.F >&5 configure:18782: $? = 0 configure:18791: result: yes configure:18797: checking whether mpif90 accepts -g configure:18808: mpif90 -c -g conftest.f >&5 configure:18808: $? = 0 configure:18816: result: yes configure:18859: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 configure:18859: $? = 0 configure:18912: checking for perl configure:18942: result: /usr/bin/perl configure:19021: checking for base mpif90 compiler configure:19052: gfortran -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 configure:19052: $? = 0 configure:19199: result: gfortran configure:19217: checking for Fortran 77 compiler vendor configure:19281: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.F >&5 conftest.F:4:5: chokeonthis 1 Error: Non-numeric character in statement label at (1) conftest.F:4:5: chokeonthis 1 Error: Unclassifiable statement at (1) configure:19281: $? = 1 configure: failed program was: | program main | | #if !(defined(__ICC) || defined(__ECC) || defined(__INTEL_COMPILER)) | chokeonthis | #endif | | end configure:19281: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.F >&5 conftest.F:4:5: chokeonthis 1 Error: Non-numeric character in statement label at (1) conftest.F:4:5: chokeonthis 1 Error: Unclassifiable statement at (1) configure:19281: $? = 1 configure: failed program was: | program main | | #if !(defined(__xlc__) || defined(__xlC__) || defined(__IBMC__) || defined(__IBMCPP__)) | chokeonthis | #endif | | end configure:19281: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.F >&5 conftest.F:4:5: chokeonthis 1 Error: Non-numeric character in statement label at (1) conftest.F:4:5: chokeonthis 1 Error: Unclassifiable statement at (1) configure:19281: $? = 1 configure: failed program was: | program main | | #if !(defined(__PATHCC__) || defined(__PATHSCALE__)) | chokeonthis | #endif | | end configure:19281: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.F >&5 conftest.F:4:5: chokeonthis 1 Error: Non-numeric character in statement label at (1) conftest.F:4:5: chokeonthis 1 Error: Unclassifiable statement at (1) configure:19281: $? = 1 configure: failed program was: | program main | | #if !(defined(__OPEN64__)) | chokeonthis | #endif | | end configure:19281: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.F >&5 conftest.F:4:5: chokeonthis 1 Error: Non-numeric character in statement label at (1) conftest.F:4:5: chokeonthis 1 Error: Unclassifiable statement at (1) configure:19281: $? = 1 configure: failed program was: | program main | | #if !(defined(_CRAYC) || defined(_ADDR64)) | chokeonthis | #endif | | end configure:19281: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.F >&5 configure:19281: $? = 0 configure:19290: result: gnu configure:19354: checking whether a Fortran MPI program links natively configure:19356: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 configure:19356: $? = 0 configure:19366: result: yes configure:19567: checking for Fortran 77 flag to suppress info messages configure:19585: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 configure:19585: $? = 0 configure:19595: result: none configure:19621: checking how to get verbose linking output from gfortran configure:19631: gfortran -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.f >&5 configure:19631: $? = 0 configure:19649: gfortran -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -v -Wl,-z,relro conftest.f -lm Using built-in specs. Target: x86_64-linux-gnu Thread model: posix gcc version 6.4.0 20170704 (Debian 6.4.0-1) /usr/lib/gcc/x86_64-linux-gnu/6/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/6/finclude -o /tmp/ccZoRjHI.s GNU Fortran (Debian 6.4.0-1) version 6.4.0 20170704 (x86_64-linux-gnu) compiled by GNU C version 6.4.0 20170704, GMP version 6.1.2, MPFR version 3.1.5, MPC version 1.0.3, isl version 0.15 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (Debian 6.4.0-1) version 6.4.0 20170704 (x86_64-linux-gnu) compiled by GNU C version 6.4.0 20170704, GMP version 6.1.2, MPFR version 3.1.5, MPC version 1.0.3, isl version 0.15 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/ccLKldqy.o /tmp/ccZoRjHI.s GNU assembler version 2.28 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.28 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/6/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/6/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/6/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/6/lto-wrapper -plugin-opt=-fresolution=/tmp/ccP7ZG9n.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -o conftest /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/6/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -z relro /tmp/ccLKldqy.o -lgfortran -lm -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/6/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/crtn.o configure:19732: result: -v configure:19734: checking for Fortran 77 libraries of gfortran configure:19757: gfortran -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -v -Wl,-z,relro conftest.f -lm Using built-in specs. Target: x86_64-linux-gnu Thread model: posix gcc version 6.4.0 20170704 (Debian 6.4.0-1) /usr/lib/gcc/x86_64-linux-gnu/6/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/6/finclude -o /tmp/cciPjbAL.s GNU Fortran (Debian 6.4.0-1) version 6.4.0 20170704 (x86_64-linux-gnu) compiled by GNU C version 6.4.0 20170704, GMP version 6.1.2, MPFR version 3.1.5, MPC version 1.0.3, isl version 0.15 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (Debian 6.4.0-1) version 6.4.0 20170704 (x86_64-linux-gnu) compiled by GNU C version 6.4.0 20170704, GMP version 6.1.2, MPFR version 3.1.5, MPC version 1.0.3, isl version 0.15 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/cc3t9jqB.o /tmp/cciPjbAL.s GNU assembler version 2.28 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.28 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/6/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/6/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/6/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/6/lto-wrapper -plugin-opt=-fresolution=/tmp/ccXMe4gr.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -o conftest /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/6/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -z relro /tmp/cc3t9jqB.o -lgfortran -lm -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/6/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/crtn.o configure:19953: result: -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath configure:19969: checking whether FLIBS needs -lgcc_s configure:19994: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath >&5 configure:19994: $? = 0 configure:20029: result: no configure:20503: checking for dummy main to link with Fortran 77 libraries configure:20537: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath >&5 configure:20537: $? = 0 configure:20582: result: none configure:20614: checking for Fortran 77 name-mangling scheme configure:20627: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.f >&5 configure:20627: $? = 0 configure:20668: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath >&5 /tmp/conftest-d76c36.o: In function `main': /<>/ga-5.4~beta~r10636+dfsg/conftest.c:164: undefined reference to `foobar' clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:20668: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Global Arrays (GA)" | #define PACKAGE_TARNAME "ga" | #define PACKAGE_VERSION "5.4" | #define PACKAGE_STRING "Global Arrays (GA) 5.4" | #define PACKAGE_BUGREPORT "hpctools@pnl.gov" | #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" | #define LINUX 1 | #define SYSV 1 | #define PACKAGE "ga" | #define VERSION "5.4" | #define MSG_COMMS_MPI 1 | #define ENABLE_PEIGS 0 | #define ENABLE_EISPACK 0 | #define ENABLE_PROFILING 0 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define LINUX64 1 | #define HAVE_ARMCI_GROUP_COMM 0 | #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 | #define HAVE_ARMCI_INITIALIZED 1 | #define HAVE_ARMCI_STRIDE_INFO_INIT 0 | #define HAVE_ARMCI_NOTIFY 0 | #define HAVE_ARMCI_MSG_INIT 0 | #define HAVE_ARMCI_MSG_FINALIZE 0 | #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 | #define HAVE_DIRENT_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_FFIO_H 0 | #define HAVE_LIMITS_H 1 | #define HAVE_LINUX_LIMITS_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_FILE_H 1 | #define HAVE_SYS_FSID_H 0 | #define HAVE_SYS_FSTYP_H 0 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_IOSW_H 0 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_MOUNT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SEM_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_SYS_STATFS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_STATVFS_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_VFS_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WINDOWS_H 0 | #define restrict __restrict | #define HAVE_LONG_DOUBLE 1 | #define RETSIGTYPE void | #define HAVE_FSEEKO 1 | #define FUNCTION_NAME __func__ | #define HAVE_PROGNAME 1 | #define PROGNAME __progname | #define SIZEOF_VOIDP 8 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define HAVE_FORK 1 | #define HAVE_VFORK 1 | #define HAVE_WORKING_VFORK 1 | #define HAVE_WORKING_FORK 1 | #define HAVE_STDLIB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define SELECT_TYPE_ARG1 int | #define SELECT_TYPE_ARG234 (fd_set *) | #define SELECT_TYPE_ARG5 (struct timeval *) | #define HAVE_FLOOR 1 | #define HAVE_MODF 1 | #define HAVE_POW 1 | #define HAVE_SQRT 1 | #define HAVE_HYPOT 1 | #define HAVE_BCOPY 1 | #define HAVE_BZERO 1 | #define HAVE_CREATE_SHARED_REGION 0 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETHOSTBYNAME 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MEMALIGN 1 | #define HAVE_MEMCPY 1 | #define HAVE_MEMSET 1 | #define HAVE_MUNMAP 1 | #define HAVE_PAUSE 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_PUTENV 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_SHARED_MALLOC 0 | #define HAVE_SHMALLOC 0 | #define HAVE_SOCKET 1 | #define HAVE_SRAND 1 | #define HAVE_SRANDOM 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_STRSTR 1 | #define HAVE_STRTOL 1 | #define HAVE_NAMESPACES 1 | #define NOFORT 0 | #define ENABLE_F77 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:20668: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath >&5 configure:20668: $? = 0 configure:20726: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath >&5 configure:20726: $? = 0 configure:20768: result: lower case, underscore, no extra underscore configure:20832: checking how to pass symbols to preprocessed mpif90 configure:20855: mpif90 -c -Wdate-time -D_FORTIFY_SOURCE=2 -DGABLAHBLAH -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.F >&5 configure:20855: $? = 0 configure:20872: result: -D configure:20885: checking whether mpif90 needs a flag to compile fixed format source configure:20904: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.f >&5 configure:20904: $? = 0 configure:20919: result: none configure:20928: checking whether mpif90 needs a flag to compile inconsistent types configure:20958: mpif90 -c -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong conftest.f >&5 configure:20958: $? = 0 configure:20973: result: none configure:20998: mpicc -o conftest -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c -lm >&5 configure:20998: $? = 0 configure:20998: ./conftest configure:20998: $? = 0 configure:21009: checking for desired Fortran INTEGER size configure:21028: result: 8 configure:21031: checking for INTEGER size compile flag configure:21321: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21321: $? = 0 configure:21343: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 /usr/bin/ld: cfortran_test.o: relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC /usr/bin/ld: final link failed: Nonrepresentable section on output collect2: error: ld returned 1 exit status configure:21343: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21321: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21321: $? = 0 configure:21343: mpif90 -o conftest -fdefault-integer-8 -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 /usr/bin/ld: cfortran_test.o: relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC /usr/bin/ld: final link failed: Nonrepresentable section on output collect2: error: ld returned 1 exit status configure:21343: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21321: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21321: $? = 0 configure:21343: mpif90 -o conftest -qintsize=8 -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 gfortran: error: unrecognized command line option '-qintsize=8' configure:21343: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21321: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21321: $? = 0 configure:21343: mpif90 -o conftest -integer-size 64 -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 gfortran: error: 64: No such file or directory gfortran: error: unrecognized command line option '-integer-size'; did you mean '-Winteger-division'? configure:21343: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21321: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21321: $? = 0 configure:21343: mpif90 -o conftest -CcdII8 -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 gfortran: error: unrecognized command line option '-CcdII8' configure:21343: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21321: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21321: $? = 0 configure:21343: mpif90 -o conftest -s integer64 -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 gfortran: error: integer64: No such file or directory configure:21343: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21321: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21321: $? = 0 configure:21343: mpif90 -o conftest -xtypemap=integer:64 -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 gfortran: error: language typemap=integer:64 not recognized gfortran: error: language typemap=integer:64 not recognized gfortran: error: language typemap=integer:64 not recognized gfortran: error: language typemap=integer:64 not recognized configure:21343: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21321: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21321: $? = 0 configure:21343: mpif90 -o conftest -i8 -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 gfortran: error: unrecognized command line option '-i8'; did you mean '-k8'? configure:21343: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21321: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21321: $? = 0 configure:21343: mpif90 -o conftest +i8 -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 gfortran: error: +i8: No such file or directory configure:21343: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21381: result: configure:21391: WARNING: !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! configure:21393: WARNING: Unable to find a flag to promote Fortran integers configure:21395: WARNING: INTEGER*8 promotion is not supported configure:21397: WARNING: !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! configure:21403: checking for -fno-aggressive-loop-optimizations support in Fortran 77 compiler configure:21420: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -fno-aggressive-loop-optimizations -Wl,-z,relro conftest.f -lm >&5 configure:21420: $? = 0 configure:21429: result: -fno-aggressive-loop-optimizations configure:21440: checking size of Fortran INTEGER configure:21491: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21491: $? = 0 configure:21513: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 /usr/bin/ld: cfortran_test.o: relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC /usr/bin/ld: final link failed: Nonrepresentable section on output collect2: error: ld returned 1 exit status configure:21513: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | INTEGER x(2) | call size(x(1),x(2)) | end configure:21543: result: no configure:21560: checking size of Fortran REAL configure:21611: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21611: $? = 0 configure:21633: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 /usr/bin/ld: cfortran_test.o: relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC /usr/bin/ld: final link failed: Nonrepresentable section on output collect2: error: ld returned 1 exit status configure:21633: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | REAL x(2) | call size(x(1),x(2)) | end configure:21663: result: no configure:21679: checking size of Fortran DOUBLE PRECISION configure:21730: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21730: $? = 0 configure:21752: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 /usr/bin/ld: cfortran_test.o: relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC /usr/bin/ld: final link failed: Nonrepresentable section on output collect2: error: ld returned 1 exit status configure:21752: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | external size | DOUBLE PRECISION x(2) | call size(x(1),x(2)) | end configure:21782: result: no configure:21802: checking for dtime configure:21802: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 conftest.f:2:72: call dtime 1 Error: Missing actual argument 'values' in call to 'dtime' at (1) configure:21802: $? = 1 configure: failed program was: | program main | call dtime | end configure:21802: result: no configure:21802: checking for etime configure:21802: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 conftest.f:2:72: call etime 1 Error: Missing actual argument 'values' in call to 'etime' at (1) configure:21802: $? = 1 configure: failed program was: | program main | call etime | end configure:21802: result: no configure:21819: checking for mpif90 flush routine configure:21838: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 configure:21838: $? = 0 configure:21867: result: flush configure:21893: checking for flag to disable mpif90 main when linking with C main configure:21923: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:21923: $? = 0 configure:21941: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 configure:21941: $? = 0 configure:21967: result: none configure:21980: checking for routines to access the command line from Fortran configure:22005: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 /tmp/cc6RxBPw.o: In function `MAIN__': ./conftest.f:7: undefined reference to `getarg_' collect2: error: ld returned 1 exit status configure:22005: $? = 1 configure: failed program was: | program main | | integer i, j, l, ier | character*20 s | external GETARG | i = 0 | call GETARG(i,s) | i=IARGC() | if (i .gt. 1) then | j = i - IARGC() | j = 1.0 / j | endif | end configure:22036: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 /tmp/ccpBKMOC.o: In function `MAIN__': ./conftest.f:7: undefined reference to `getarg_' collect2: error: ld returned 1 exit status configure:22036: $? = 1 configure: failed program was: | program main | | integer i, j, l, ier | character*20 s | external getarg | i = 0 | call getarg(i,s) | i=iargc() | if (i .gt. 1) then | j = i - iargc() | j = 1.0 / j | endif | end configure:22067: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 /tmp/ccWtgQUH.o: In function `MAIN__': ./conftest.f:7: undefined reference to `pxfgetarg_' ./conftest.f:8: undefined reference to `ipxfargc_' ./conftest.f:10: undefined reference to `ipxfargc_' collect2: error: ld returned 1 exit status configure:22067: $? = 1 configure: failed program was: | program main | | integer i, j, l, ier | character*20 s | external pxfgetarg | i = 0 | call pxfgetarg(i,s,l,ier) | i=ipxfargc() | if (i .gt. 1) then | j = i - ipxfargc() | j = 1.0 / j | endif | end configure:22098: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 conftest.f:2:17: use f90_unix_env 1 Fatal Error: Can't open module file 'f90_unix_env.mod' for reading at (1): No such file or directory compilation terminated. configure:22098: $? = 1 configure: failed program was: | program main | use f90_unix_env | integer i, j, l, ier | character*20 s | | i = 0 | call getarg(i,s) | i=iargc() | if (i .gt. 1) then | j = i - iargc() | j = 1.0 / j | endif | end configure:22129: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 conftest.f:2:17: use f90_unix 1 Fatal Error: Can't open module file 'f90_unix.mod' for reading at (1): No such file or directory compilation terminated. configure:22129: $? = 1 configure: failed program was: | program main | use f90_unix | integer i, j, l, ier | character*20 s | | i = 0 | call getarg(i,s) | i=iargc() | if (i .gt. 1) then | j = i - iargc() | j = 1.0 / j | endif | end configure:22160: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f -lm >&5 configure:22160: $? = 0 configure:22174: result: yes configure:22249: checking whether Fortran hidden string length convention is after args configure:22326: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:22326: $? = 0 configure:22350: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 /usr/bin/ld: cfortran_test.o: relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC /usr/bin/ld: final link failed: Nonrepresentable section on output collect2: error: ld returned 1 exit status configure:22350: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | character(LEN=10) :: first_name | character(LEN=15) :: last_name | first_name = "John" | last_name = "Doe" | call sub(first_name, last_name) | end configure:22439: mpicc -c -g -O2 -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:22439: $? = 0 configure:22463: mpif90 -o conftest -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wl,-z,relro conftest.f cfortran_test.o -lm >&5 /usr/bin/ld: cfortran_test.o: relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC /usr/bin/ld: final link failed: Nonrepresentable section on output collect2: error: ld returned 1 exit status configure:22463: $? = 1 configure: program exited with status 1 configure: failed program was: | program main | character(LEN=10) :: first_name | character(LEN=15) :: last_name | first_name = "John" | last_name = "Doe" | call sub(first_name, last_name) | end configure:22493: result: configure:22511: error: f2c string convention is neither after args nor after string ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_c_inline=inline ac_cv_c_int64_t=yes ac_cv_c_restrict=__restrict ac_cv_c_volatile=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_AR_FLAGS_set= ac_cv_env_AR_FLAGS_value= ac_cv_env_AR_set= ac_cv_env_AR_value= ac_cv_env_CCASFLAGS_set= ac_cv_env_CCASFLAGS_value= ac_cv_env_CCAS_set= ac_cv_env_CCAS_value= ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-g -O2' ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value='-Wdate-time -D_FORTIFY_SOURCE=2' ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set=set ac_cv_env_CXXFLAGS_value='-g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_F2C_HIDDEN_STRING_LENGTH_AFTER_ARGS_set= ac_cv_env_F2C_HIDDEN_STRING_LENGTH_AFTER_ARGS_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FFLAGS_set=set ac_cv_env_FFLAGS_value='-g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong' ac_cv_env_FFLAG_INT_set= ac_cv_env_FFLAG_INT_value= ac_cv_env_GA_COPT_set= ac_cv_env_GA_COPT_value= ac_cv_env_GA_CXXOPT_set= ac_cv_env_GA_CXXOPT_value= ac_cv_env_GA_FOPT_set= ac_cv_env_GA_FOPT_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value=-Wl,-z,relro ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPICC_set= ac_cv_env_MPICC_value= ac_cv_env_MPICXX_set= ac_cv_env_MPICXX_value= ac_cv_env_MPIEXEC_set= ac_cv_env_MPIEXEC_value= ac_cv_env_MPIF77_set= ac_cv_env_MPIF77_value= ac_cv_env_NPROCS_set= ac_cv_env_NPROCS_value= ac_cv_env_PYTHON_set= ac_cv_env_PYTHON_value= ac_cv_env_RANLIB_set= ac_cv_env_RANLIB_value= ac_cv_env_THREAD_LIBRARY_set= ac_cv_env_THREAD_LIBRARY_value= ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=x86_64-linux-gnu ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=yes ac_cv_f77_dummy_main=none ac_cv_f77_libs=' -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath' ac_cv_f77_mangling='lower case, underscore, no extra underscore' ac_cv_fortran_dummy_main=none ac_cv_func_bcopy=yes ac_cv_func_bzero=yes ac_cv_func_create_shared_region=no ac_cv_func_dtime=no ac_cv_func_etime=no ac_cv_func_fork=yes ac_cv_func_fork_works=yes ac_cv_func_ftruncate=yes ac_cv_func_gethostbyname=yes ac_cv_func_gethostname=yes ac_cv_func_getpagesize=yes ac_cv_func_gettimeofday=yes ac_cv_func_memalign=yes ac_cv_func_memcpy=yes ac_cv_func_memset=yes ac_cv_func_mmap_fixed_mapped=yes ac_cv_func_munmap=yes ac_cv_func_pause=yes ac_cv_func_posix_memalign=yes ac_cv_func_putenv=yes ac_cv_func_select=yes ac_cv_func_select_args='int,fd_set *,struct timeval *' ac_cv_func_setenv=yes ac_cv_func_shared_malloc=no ac_cv_func_shmalloc=no ac_cv_func_socket=yes ac_cv_func_srand=yes ac_cv_func_srandom=yes ac_cv_func_strchr=yes ac_cv_func_strdup=yes ac_cv_func_strerror=yes ac_cv_func_strstr=yes ac_cv_func_strtol=yes ac_cv_func_vfork=yes ac_cv_func_vfork_works=yes ac_cv_header_armci_h=yes ac_cv_header_assert_h=yes ac_cv_header_dirent_dirent_h=yes ac_cv_header_errno_h=yes ac_cv_header_fcntl_h=yes ac_cv_header_ffio_h=no ac_cv_header_inttypes_h=yes ac_cv_header_limits_h=yes ac_cv_header_linux_limits_h=yes ac_cv_header_malloc_h=yes ac_cv_header_math_h=yes ac_cv_header_memory_h=yes ac_cv_header_minix_config_h=no ac_cv_header_stdbool_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_file_h=yes ac_cv_header_sys_fsid_h=no ac_cv_header_sys_fstyp_h=no ac_cv_header_sys_ioctl_h=yes ac_cv_header_sys_iosw_h=no ac_cv_header_sys_ipc_h=yes ac_cv_header_sys_mman_h=yes ac_cv_header_sys_mount_h=yes ac_cv_header_sys_param_h=yes ac_cv_header_sys_select_h=yes ac_cv_header_sys_sem_h=yes ac_cv_header_sys_shm_h=yes ac_cv_header_sys_socket_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_statfs_h=yes ac_cv_header_sys_statvfs_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_vfs_h=yes ac_cv_header_sys_wait_h=yes ac_cv_header_time_h=yes ac_cv_header_unistd_h=yes ac_cv_header_vfork_h=no ac_cv_header_windows_h=no ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_plot_openpl=no ac_cv_member_ARMCI_Group_comm=1 ac_cv_objext=o ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_GREP=/bin/grep ac_cv_path_PERL=/usr/bin/perl ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AWK=mawk ac_cv_prog_CPP='mpicc -E' ac_cv_prog_ac_ct_CC=mpicc ac_cv_prog_ac_ct_CXX=mpic++ ac_cv_prog_ac_ct_F77=mpif90 ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_make_make_set=yes ac_cv_safe_to_define___extensions__=yes ac_cv_search_ARMCI_Init=-larmci ac_cv_search_ARMCI_Initialized=1 ac_cv_search_armci_group_comm=0 ac_cv_search_armci_msg_finalize=0 ac_cv_search_armci_msg_init=0 ac_cv_search_armci_notify=0 ac_cv_search_armci_stride_info_init=0 ac_cv_search_floor=-lm ac_cv_search_hypot='none required' ac_cv_search_modf='none required' ac_cv_search_opendir='none required' ac_cv_search_pow='none required' ac_cv_search_sqrt='none required' ac_cv_sizeof_char=1 ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_int=4 ac_cv_sizeof_long=8 ac_cv_sizeof_long_double=16 ac_cv_sizeof_long_long=8 ac_cv_sizeof_short=2 ac_cv_sizeof_voidp=8 ac_cv_sys_file_offset_bits=no ac_cv_sys_largefile_CC=no ac_cv_sys_largefile_source=no ac_cv_type__Bool=yes ac_cv_type_long_double=yes ac_cv_type_off_t=yes ac_cv_type_pid_t=yes ac_cv_type_signal=void ac_cv_type_size_t=yes am_cv_CCAS_dependencies_compiler_type=none am_cv_CC_dependencies_compiler_type=none am_cv_CXX_dependencies_compiler_type=none am_cv_make_support_nested_variables=yes ax_cv_sys_weak_alias_pragma=no ga_cv_c_compiler_vendor=gnu ga_cv_c_gnu_loop_opt= ga_cv_c_mpi_test_compile=yes ga_cv_c_opt= ga_cv_c_pointer_as_integer=long ga_cv_cpp_function=__func__ ga_cv_cross_compiling=no ga_cv_cxx_compiler_vendor=gnu ga_cv_cxx_mpi_test=yes ga_cv_cxx_namespaces=yes ga_cv_cxx_opt= ga_cv_f77_compiler_vendor=gnu ga_cv_f77_cpp_symbol=-D ga_cv_f77_fixed_flag=none ga_cv_f77_flush=flush ga_cv_f77_flush_flag=none ga_cv_f77_gnu_loop_opt=-fno-aggressive-loop-optimizations ga_cv_f77_integer_size=8 ga_cv_f77_mismatch_type_flag=none ga_cv_f77_mpi_test_link=yes ga_cv_f77_sizeof_DOUBLE_PRECISION=no ga_cv_f77_sizeof_INTEGER=no ga_cv_f77_sizeof_REAL=no ga_cv_f77_suppress=none ga_cv_fld_nomain=none ga_cv_flibs_gcc_s=no ga_cv_mpic_naked=gcc ga_cv_mpicxx_naked=g++ ga_cv_mpif77_naked=gfortran ga_cv_progname=__progname ga_cv_sysv=yes ga_cv_sysv_hack=no ga_cv_target=LINUX64 ga_cv_target_base=LINUX ga_cv_union_semun=no ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /<>/ga-5.4~beta~r10636+dfsg/build-aux/missing --run aclocal-1.11' AMDEPBACKSLASH='' AMDEP_FALSE='' AMDEP_TRUE='#' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='' ARMCI_NETWORK_ARMCI_FALSE='#' ARMCI_NETWORK_ARMCI_TRUE='' ARMCI_NETWORK_BGML_FALSE='' ARMCI_NETWORK_BGML_TRUE='#' ARMCI_NETWORK_COMEX_FALSE='' ARMCI_NETWORK_COMEX_TRUE='#' ARMCI_NETWORK_CPPFLAGS=' -I/usr/include' ARMCI_NETWORK_CRAY_SHMEM_FALSE='' ARMCI_NETWORK_CRAY_SHMEM_TRUE='#' ARMCI_NETWORK_DCMF_FALSE='' ARMCI_NETWORK_DCMF_TRUE='#' ARMCI_NETWORK_DMAPP_FALSE='' ARMCI_NETWORK_DMAPP_TRUE='#' ARMCI_NETWORK_EXTERNAL_FALSE='#' ARMCI_NETWORK_EXTERNAL_TRUE='' ARMCI_NETWORK_GEMINI_FALSE='' ARMCI_NETWORK_GEMINI_TRUE='#' ARMCI_NETWORK_LAPI_FALSE='' ARMCI_NETWORK_LAPI_TRUE='#' ARMCI_NETWORK_LDFLAGS=' -L/usr/lib' ARMCI_NETWORK_LIBS=' -larmci' ARMCI_NETWORK_MPI_MT_FALSE='' ARMCI_NETWORK_MPI_MT_TRUE='#' ARMCI_NETWORK_MPI_PR_FALSE='' ARMCI_NETWORK_MPI_PR_TRUE='#' ARMCI_NETWORK_MPI_PT_FALSE='' ARMCI_NETWORK_MPI_PT_TRUE='#' ARMCI_NETWORK_MPI_SPAWN_FALSE='' ARMCI_NETWORK_MPI_SPAWN_TRUE='#' ARMCI_NETWORK_MPI_TS_FALSE='' ARMCI_NETWORK_MPI_TS_TRUE='#' ARMCI_NETWORK_OFA_FALSE='' ARMCI_NETWORK_OFA_TRUE='#' ARMCI_NETWORK_OPENIB_FALSE='' ARMCI_NETWORK_OPENIB_TRUE='#' ARMCI_NETWORK_PORTALS4_FALSE='' ARMCI_NETWORK_PORTALS4_TRUE='#' ARMCI_NETWORK_PORTALS_FALSE='' ARMCI_NETWORK_PORTALS_TRUE='#' ARMCI_NETWORK_SOCKETS_FALSE='' ARMCI_NETWORK_SOCKETS_TRUE='#' ARMCI_SRC_DIR='src' ARMCI_SRC_DIR_COMEX_FALSE='' ARMCI_SRC_DIR_COMEX_TRUE='#' ARMCI_SRC_DIR_GEMINI_FALSE='' ARMCI_SRC_DIR_GEMINI_TRUE='#' ARMCI_SRC_DIR_PORTALS_FALSE='' ARMCI_SRC_DIR_PORTALS_TRUE='#' ARMCI_SRC_DIR_SRC_FALSE='#' ARMCI_SRC_DIR_SRC_TRUE='' AR_FLAGS='' AUTOCONF='${SHELL} /<>/ga-5.4~beta~r10636+dfsg/build-aux/missing --run autoconf' AUTOHEADER='${SHELL} /<>/ga-5.4~beta~r10636+dfsg/build-aux/missing --run autoheader' AUTOMAKE='${SHELL} /<>/ga-5.4~beta~r10636+dfsg/build-aux/missing --run automake-1.11' AWK='mawk' BGL_FALSE='' BGL_TRUE='#' BGP_FALSE='' BGP_TRUE='#' BLAS_CPPFLAGS='' BLAS_LDFLAGS='' BLAS_LIBS='' CATAMOUNT_FALSE='' CATAMOUNT_TRUE='#' CC='mpicc' CCAS='mpicc' CCASDEPMODE='depmode=none' CCASFLAGS='-g -O2' CCDEPMODE='depmode=none' CFLAGS='-g -O2' CFLAG_NO_LOOP_OPT='' CPP='mpicc -E' CPPFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2' CRAY_SV1_FALSE='' CRAY_SV1_TRUE='#' CRAY_SV2_FALSE='' CRAY_SV2_TRUE='#' CRAY_T3E_FALSE='' CRAY_T3E_TRUE='#' CRAY_XT_FALSE='' CRAY_XT_NETWORKS_FALSE='' CRAY_XT_NETWORKS_TRUE='#' CRAY_XT_TRUE='#' CRAY_YMP_FALSE='' CRAY_YMP_TRUE='#' CROSS_COMPILING_FALSE='' CROSS_COMPILING_TRUE='#' CXX='mpic++' CXXCPP='' CXXDEPMODE='depmode=none' CXXFLAGS='-g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' CXX_BINDINGS_FALSE='#' CXX_BINDINGS_TRUE='' CXX_NAMESPACES_FALSE='#' CXX_NAMESPACES_TRUE='' CYGNUS_FALSE='' CYGNUS_TRUE='#' CYGPATH_W='echo' CYGWIN_FALSE='' CYGWIN_TRUE='#' C_POINTER_AS_INTEGER='long' DCMF_VER_0_2_FALSE='' DCMF_VER_0_2_TRUE='#' DCMF_VER_0_3_FALSE='#' DCMF_VER_0_3_TRUE='' DCMF_VER_2_FALSE='' DCMF_VER_2_TRUE='#' DECOSF_FALSE='' DECOSF_TRUE='#' DEFS='' DEPDIR='.deps' DLLTOOL='' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' ELPA_CPPFLAGS='' ELPA_LDFLAGS='' ELPA_LIBS='' ENABLE_ARMCI_MEM_OPTION_FALSE='' ENABLE_ARMCI_MEM_OPTION_TRUE='' ENABLE_CHECKPOINT_FALSE='' ENABLE_CHECKPOINT_TRUE='#' ENABLE_EISPACK_FALSE='' ENABLE_EISPACK_TRUE='#' ENABLE_F77_FALSE='#' ENABLE_F77_TRUE='' ENABLE_GPARRAYS_FALSE='' ENABLE_GPARRAYS_TRUE='' ENABLE_PEIGS_FALSE='' ENABLE_PEIGS_TRUE='#' ENABLE_PROFILING_FALSE='' ENABLE_PROFILING_TRUE='#' ENABLE_TRACE_FALSE='' ENABLE_TRACE_TRUE='#' ENABLE_UNIT_TESTS_FALSE='' ENABLE_UNIT_TESTS_TRUE='#' ENABLE_XREGION_FALSE='' ENABLE_XREGION_TRUE='' EXEEXT='.x' F2C_DOUBLE_PRECISION_C_TYPE='' F2C_GETARG='f2c_getarg_' F2C_HIDDEN_STRING_LENGTH_AFTER_ARGS='' F2C_IARGC='f2c_iargc_' F2C_INTEGER_C_TYPE='' F2C_REAL_C_TYPE='' F77='mpif90' F77LINK='' FFLAGS=' -g -O2 -fdebug-prefix-map=/<>/ga-5.4~beta~r10636+dfsg=. -fstack-protector-strong' FFLAG_INT='' FFLAG_NO_LOOP_OPT='-fno-aggressive-loop-optimizations' FGREP='' FLD_NOMAIN='' FLIBS=' -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath' FUJITSU_VPP_FALSE='' FUJITSU_VPP_TRUE='#' GA_ACCESS_INDEX_TYPE='' GA_COPT='' GA_CXXOPT='' GA_CXX_WARN='' GA_C_WARN='' GA_FOPT='' GA_F_WARN='' GA_MP_CPPFLAGS='' GA_MP_LDFLAGS='' GA_MP_LIBS='' GREP='/bin/grep' HAVE_ARMCI_GROUP_COMM_FALSE='' HAVE_ARMCI_GROUP_COMM_MEMBER_FALSE='#' HAVE_ARMCI_GROUP_COMM_MEMBER_TRUE='' HAVE_ARMCI_GROUP_COMM_TRUE='#' HAVE_ARMCI_INITIALIZED_FALSE='' HAVE_ARMCI_INITIALIZED_TRUE='#' HAVE_ARMCI_MSG_FINALIZE_FALSE='' HAVE_ARMCI_MSG_FINALIZE_TRUE='#' HAVE_ARMCI_MSG_INIT_FALSE='' HAVE_ARMCI_MSG_INIT_TRUE='#' HAVE_ARMCI_NOTIFY_FALSE='' HAVE_ARMCI_NOTIFY_TRUE='#' HAVE_ARMCI_STRIDE_INFO_INIT_FALSE='' HAVE_ARMCI_STRIDE_INFO_INIT_TRUE='#' HAVE_BLAS_FALSE='' HAVE_BLAS_TRUE='' HAVE_ELPA_FALSE='' HAVE_ELPA_TRUE='' HAVE_LAPACK_FALSE='' HAVE_LAPACK_TRUE='' HAVE_M4_FALSE='' HAVE_M4_TRUE='' HAVE_PERL_FALSE='' HAVE_PERL_TRUE='' HAVE_PYTHON_FALSE='' HAVE_PYTHON_TRUE='' HAVE_SCALAPACK_FALSE='' HAVE_SCALAPACK_TRUE='' HAVE_SYS_WEAK_ALIAS_PRAGMA_FALSE='' HAVE_SYS_WEAK_ALIAS_PRAGMA_TRUE='#' HITACHI_FALSE='' HITACHI_TRUE='#' HPUX_FALSE='' HPUX_TRUE='#' IBM_FALSE='' IBM_TRUE='#' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' INTERIX_FALSE='' INTERIX_TRUE='#' LAPACK_CPPFLAGS='' LAPACK_LDFLAGS='' LAPACK_LIBS='' LAPI_FALSE='' LAPI_TRUE='#' LD='' LDFLAGS='-Wl,-z,relro' LIBOBJS='' LIBS='-lm ' LIBTOOL='' LINUX_FALSE='#' LINUX_TRUE='' LIPO='' LN_S='' LTLIBOBJS='' M4='' MACX_FALSE='' MACX_TRUE='#' MAINT='#' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAKEINFO='${SHELL} /<>/ga-5.4~beta~r10636+dfsg/build-aux/missing --run makeinfo' MANIFEST_TOOL='' MA_ACCESS_INDEX_TYPE='' MA_ACCESS_INDEX_TYPE_C='' MA_LONG_DOUBLE='' MKDIR_P='/bin/mkdir -p' MPICC='' MPICXX='' MPIEXEC='' MPIF77='' MSG_COMMS_MPI_FALSE='#' MSG_COMMS_MPI_TRUE='' MSG_COMMS_TCGMSG4_FALSE='' MSG_COMMS_TCGMSG4_TRUE='#' MSG_COMMS_TCGMSG5_FALSE='' MSG_COMMS_TCGMSG5_TRUE='#' NEC_FALSE='' NEC_TRUE='#' NM='' NMEDIT='' NOFORT_FALSE='' NOFORT_TRUE='#' NO_X_FALSE='' NO_X_TRUE='' NPROCS='' OBJDUMP='' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='ga' PACKAGE_BUGREPORT='hpctools@pnl.gov' PACKAGE_NAME='Global Arrays (GA)' PACKAGE_STRING='Global Arrays (GA) 5.4' PACKAGE_TARNAME='ga' PACKAGE_URL='http://www.emsl.pnl.gov/docs/global/' PACKAGE_VERSION='5.4' PATH_SEPARATOR=':' PERL='/usr/bin/perl' PLOTLIB='' PYTHON='' PYTHON_EXEC_PREFIX='' PYTHON_PLATFORM='' PYTHON_PREFIX='' PYTHON_VERSION='' RANLIB='' SCALAPACK_CPPFLAGS='' SCALAPACK_LDFLAGS='' SCALAPACK_LIBS='' SED='' SET_MAKE='' SGITFP_FALSE='' SGITFP_TRUE='#' SGI_FALSE='' SGI_N32_FALSE='' SGI_N32_TRUE='#' SGI_TRUE='#' SHELL='/bin/bash' SOLARIS_FALSE='' SOLARIS_TRUE='#' STRIP='' SYSV_FALSE='' SYSV_TRUE='#' TCGEXEC='' THREAD_LIBRARY='' THREAD_SAFE_FALSE='' THREAD_SAFE_TRUE='#' VERSION='5.4' XMKMF='' X_CPPFLAGS='' X_LDFLAGS='' ac_ct_AR='' ac_ct_CC='mpicc' ac_ct_CXX='mpic++' ac_ct_DUMPBIN='' ac_ct_F77='mpif90' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCCAS_FALSE='' am__fastdepCCAS_TRUE='#' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='#' am__fastdepCXX_FALSE='' am__fastdepCXX_TRUE='#' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' am__v_F77LD_0='' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='x86_64-linux-gnu' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${prefix}/share/info' install_sh='${SHELL} /<>/ga-5.4~beta~r10636+dfsg/build-aux/install-sh' libdir='${prefix}/lib/x86_64-linux-gnu' libexecdir='${prefix}/lib/x86_64-linux-gnu' localedir='${datarootdir}/locale' localstatedir='/var' mandir='${prefix}/share/man' mkdir_p='/bin/mkdir -p' oldincludedir='/usr/include' pdfdir='${docdir}' pkgpyexecdir='' pkgpythondir='' prefix='/usr' program_transform_name='s,x,x,' psdir='${docdir}' pyexecdir='' pythondir='' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs='' sysconfdir='/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "Global Arrays (GA)" #define PACKAGE_TARNAME "ga" #define PACKAGE_VERSION "5.4" #define PACKAGE_STRING "Global Arrays (GA) 5.4" #define PACKAGE_BUGREPORT "hpctools@pnl.gov" #define PACKAGE_URL "http://www.emsl.pnl.gov/docs/global/" #define LINUX 1 #define SYSV 1 #define PACKAGE "ga" #define VERSION "5.4" #define MSG_COMMS_MPI 1 #define ENABLE_PEIGS 0 #define ENABLE_EISPACK 0 #define ENABLE_PROFILING 0 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define __EXTENSIONS__ 1 #define _ALL_SOURCE 1 #define _GNU_SOURCE 1 #define _POSIX_PTHREAD_SEMANTICS 1 #define _TANDEM_SOURCE 1 #define LINUX64 1 #define HAVE_ARMCI_GROUP_COMM 0 #define HAVE_ARMCI_GROUP_COMM_MEMBER 1 #define HAVE_ARMCI_INITIALIZED 1 #define HAVE_ARMCI_STRIDE_INFO_INIT 0 #define HAVE_ARMCI_NOTIFY 0 #define HAVE_ARMCI_MSG_INIT 0 #define HAVE_ARMCI_MSG_FINALIZE 0 #define NEED_DELAY_TCGMSG_MPI_STARTUP 0 #define HAVE_DIRENT_H 1 #define HAVE__BOOL 1 #define HAVE_STDBOOL_H 1 #define STDC_HEADERS 1 #define HAVE_SYS_WAIT_H 1 #define HAVE_ASSERT_H 1 #define HAVE_ERRNO_H 1 #define HAVE_FCNTL_H 1 #define HAVE_FFIO_H 0 #define HAVE_LIMITS_H 1 #define HAVE_LINUX_LIMITS_H 1 #define HAVE_MALLOC_H 1 #define HAVE_MATH_H 1 #define HAVE_STDDEF_H 1 #define HAVE_STDINT_H 1 #define HAVE_STDIO_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_STRINGS_H 1 #define HAVE_SYS_FILE_H 1 #define HAVE_SYS_FSID_H 0 #define HAVE_SYS_FSTYP_H 0 #define HAVE_SYS_IOCTL_H 1 #define HAVE_SYS_IOSW_H 0 #define HAVE_SYS_IPC_H 1 #define HAVE_SYS_MMAN_H 1 #define HAVE_SYS_MOUNT_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_SEM_H 1 #define HAVE_SYS_SHM_H 1 #define HAVE_SYS_STATFS_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_STATVFS_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_VFS_H 1 #define HAVE_TIME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_WINDOWS_H 0 #define restrict __restrict #define HAVE_LONG_DOUBLE 1 #define RETSIGTYPE void #define HAVE_FSEEKO 1 #define FUNCTION_NAME __func__ #define HAVE_PROGNAME 1 #define PROGNAME __progname #define SIZEOF_VOIDP 8 #define SIZEOF_CHAR 1 #define SIZEOF_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_LONG 8 #define SIZEOF_LONG_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG_DOUBLE 16 #define HAVE_FORK 1 #define HAVE_VFORK 1 #define HAVE_WORKING_VFORK 1 #define HAVE_WORKING_FORK 1 #define HAVE_STDLIB_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_GETPAGESIZE 1 #define HAVE_MMAP 1 #define HAVE_SYS_SELECT_H 1 #define HAVE_SYS_SOCKET_H 1 #define SELECT_TYPE_ARG1 int #define SELECT_TYPE_ARG234 (fd_set *) #define SELECT_TYPE_ARG5 (struct timeval *) #define HAVE_FLOOR 1 #define HAVE_MODF 1 #define HAVE_POW 1 #define HAVE_SQRT 1 #define HAVE_HYPOT 1 #define HAVE_BCOPY 1 #define HAVE_BZERO 1 #define HAVE_CREATE_SHARED_REGION 0 #define HAVE_FTRUNCATE 1 #define HAVE_GETHOSTBYNAME 1 #define HAVE_GETHOSTNAME 1 #define HAVE_GETPAGESIZE 1 #define HAVE_GETTIMEOFDAY 1 #define HAVE_MEMALIGN 1 #define HAVE_MEMCPY 1 #define HAVE_MEMSET 1 #define HAVE_MUNMAP 1 #define HAVE_PAUSE 1 #define HAVE_POSIX_MEMALIGN 1 #define HAVE_PUTENV 1 #define HAVE_SELECT 1 #define HAVE_SETENV 1 #define HAVE_SHARED_MALLOC 0 #define HAVE_SHMALLOC 0 #define HAVE_SOCKET 1 #define HAVE_SRAND 1 #define HAVE_SRANDOM 1 #define HAVE_STRCHR 1 #define HAVE_STRDUP 1 #define HAVE_STRERROR 1 #define HAVE_STRSTR 1 #define HAVE_STRTOL 1 #define HAVE_NAMESPACES 1 #define NOFORT 0 #define ENABLE_F77 1 #define F77_FUNC(name,NAME) name ## _ #define F77_FUNC_(name,NAME) name ## _ #define SIZEOF_F77_INTEGER no #define SIZEOF_F77_REAL no #define SIZEOF_F77_DOUBLE_PRECISION no #define HAVE_DTIME 0 #define HAVE_ETIME 0 #define F77_FLUSH flush #define HAVE_F77_FLUSH 1 #define F77_GETARG_DECL intrinsic GETARG #define F77_GETARG GETARG #define F77_GETARG_ARGS i,s #define F77_IARGC IARGC #define FXX_MODULE configure: exit 1 dh_auto_configure: ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=${prefix}/lib/x86_64-linux-gnu --libexecdir=${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --enable-cxx --with-tcgmsg --with-scalapack=-lscalapack-openmpi -lblacs-openmpi --with-blas=-lblas --with-lapack=-llapack --with-mpi --with-armci=/usr returned exit code 1 debian/rules:9: recipe for target 'override_dh_auto_configure' failed make[1]: *** [override_dh_auto_configure] Error 2 make[1]: Leaving directory '/<>/ga-5.4~beta~r10636+dfsg' debian/rules:6: recipe for target 'build-arch' failed make: *** [build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 2017-07-06T17:12:00Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 45468 Build-Time: 15 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 9 Job: ga_5.4~beta~r10636+dfsg-5 Machine Architecture: amd64 Package: ga Package-Time: 39 Source-Version: 5.4~beta~r10636+dfsg-5 Space: 45468 Status: attempted Version: 5.4~beta~r10636+dfsg-5 -------------------------------------------------------------------------------- Finished at 2017-07-06T17:12:00Z Build needed 00:00:39, 45468k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 39.952777438s DC-Time-Estimation: 39.952777438 versus expected 1275 (r/m: 30.912674956793328 ; m: 39.952777438)