DC-Build-Header: qiime 1.9.1+dfsg-1 / 2017-07-06 19:52:27 +0000 DC-Task: type:rebuild-binarch-only source:qiime version:1.9.1+dfsg-1 chroot:unstable esttime:402 logfile:/tmp/qiime_1.9.1+dfsg-1_unstable_clang3.9.log modes:clang:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang qiime_1.9.1+dfsg-1' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-42-25.eu-central-1.compute.internal +==============================================================================+ | qiime 1.9.1+dfsg-1 (amd64) Thu, 06 Jul 2017 19:52:27 +0000 | +==============================================================================+ Package: qiime Version: 1.9.1+dfsg-1 Source Version: 1.9.1+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-60177906-0624-4fde-a234-da04a5388ced' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang ---------- + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=3.9 + echo 'Install of clang-3.9' Install of clang-3.9 + apt-get update Get:1 http://127.0.0.1:9999/debian unstable InRelease [255 kB] Get:2 http://127.0.0.1:9999/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Translation-en.diff/Index [27.9 kB] Get:5 http://127.0.0.1:9999/debian unstable/main Sources 2017-07-02-0216.39.pdiff [15.0 kB] Get:6 http://127.0.0.1:9999/debian unstable/main Sources 2017-07-02-0817.00.pdiff [7416 B] Get:7 http://127.0.0.1:9999/debian unstable/main Sources 2017-07-02-1415.16.pdiff [17.0 kB] Get:8 http://127.0.0.1:9999/debian unstable/main Sources 2017-07-02-2015.53.pdiff [15.2 kB] Get:9 http://127.0.0.1:9999/debian unstable/main Sources 2017-07-03-0215.43.pdiff [50.2 kB] Get:10 http://127.0.0.1:9999/debian unstable/main Sources 2017-07-03-0815.58.pdiff [5500 B] Get:11 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2017-07-06-0817.23.pdiff [31.2 kB] Get:41 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-02-0216.39.pdiff [1271 B] Get:42 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-02-2015.53.pdiff [793 B] Get:43 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-03-0215.43.pdiff [327 B] Get:44 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-03-0815.58.pdiff [270 B] Get:45 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-03-1420.59.pdiff [1066 B] Get:46 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-03-2015.52.pdiff [465 B] Get:47 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-04-0215.56.pdiff [291 B] Get:48 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-04-0817.36.pdiff [539 B] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2017-07-06-0817.23.pdiff [31.2 kB] Get:49 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-04-1416.28.pdiff [484 B] Get:50 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-04-2017.16.pdiff [1126 B] Get:51 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-05-0215.45.pdiff [214 B] Get:52 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-05-0817.10.pdiff [606 B] Get:53 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-05-1416.09.pdiff [214 B] Get:54 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-05-2019.56.pdiff [2615 B] Get:55 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-06-0216.07.pdiff [1869 B] Get:56 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-06-0817.23.pdiff [915 B] Get:56 http://127.0.0.1:9999/debian unstable/main Translation-en 2017-07-06-0817.23.pdiff [915 B] Fetched 974 kB in 1s (811 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-3.9 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: cpp-6 g++-6 gcc-6 gcc-6-base gcc-7-base libasan3 libatomic1 libbsd0 libcc1-0 libcilkrts5 libclang-common-3.9-dev libclang1-3.9 libedit2 libffi6 libgcc-6-dev libgcc1 libgomp1 libitm1 libjsoncpp1 libllvm3.9 liblsan0 libmpx2 libncurses5 libobjc-6-dev libobjc4 libquadmath0 libstdc++-6-dev libstdc++6 libtsan0 libubsan0 Suggested packages: gnustep gnustep-devel clang-3.9-doc gcc-6-locales g++-6-multilib gcc-6-doc libstdc++6-6-dbg gcc-6-multilib libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan3-dbg liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx2-dbg libquadmath0-dbg libstdc++-6-doc Recommended packages: llvm-3.9-dev python libgpm2 The following NEW packages will be installed: clang-3.9 libbsd0 libclang-common-3.9-dev libclang1-3.9 libedit2 libffi6 libjsoncpp1 libllvm3.9 libncurses5 libobjc-6-dev libobjc4 The following packages will be upgraded: cpp-6 g++-6 gcc-6 gcc-6-base gcc-7-base libasan3 libatomic1 libcc1-0 libcilkrts5 libgcc-6-dev libgcc1 libgomp1 libitm1 liblsan0 libmpx2 libquadmath0 libstdc++-6-dev libstdc++6 libtsan0 libubsan0 20 upgraded, 11 newly installed, 0 to remove and 13 not upgraded. Need to get 83.9 MB of archives. After this operation, 251 MB of additional disk space will be used. 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Preparing to unpack .../16-libclang-common-3.9-dev_1%3a3.9.1-10_amd64.deb ... Unpacking libclang-common-3.9-dev (1:3.9.1-10) ... Selecting previously unselected package clang-3.9. Preparing to unpack .../17-clang-3.9_1%3a3.9.1-10_amd64.deb ... Unpacking clang-3.9 (1:3.9.1-10) ... Setting up libquadmath0:amd64 (7.1.0-9) ... Setting up libncurses5:amd64 (6.0+20161126-1) ... Setting up libgomp1:amd64 (7.1.0-9) ... Setting up libatomic1:amd64 (7.1.0-9) ... Setting up libcc1-0:amd64 (7.1.0-9) ... Setting up libobjc4:amd64 (7.1.0-9) ... Setting up libcilkrts5:amd64 (7.1.0-9) ... Setting up libubsan0:amd64 (7.1.0-9) ... Setting up libtsan0:amd64 (7.1.0-9) ... Setting up gcc-6-base:amd64 (6.4.0-1) ... Setting up libbsd0:amd64 (0.8.5-1) ... Setting up liblsan0:amd64 (7.1.0-9) ... Setting up libmpx2:amd64 (7.1.0-9) ... Processing triggers for libc-bin (2.24-12) ... Setting up libffi6:amd64 (3.2.1-6) ... Setting up cpp-6 (6.4.0-1) ... Setting up libitm1:amd64 (7.1.0-9) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libasan3:amd64 (6.4.0-1) ... Setting up libgcc-6-dev:amd64 (6.4.0-1) ... Setting up libstdc++-6-dev:amd64 (6.4.0-1) ... Setting up libllvm3.9:amd64 (1:3.9.1-10) ... Setting up libclang-common-3.9-dev (1:3.9.1-10) ... Setting up gcc-6 (6.4.0-1) ... Setting up g++-6 (6.4.0-1) ... Setting up libobjc-6-dev:amd64 (6.4.0-1) ... Setting up libclang1-3.9:amd64 (1:3.9.1-10) ... Setting up clang-3.9 (1:3.9.1-10) ... Processing triggers for libc-bin (2.24-12) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-3.9 g++-4.6 + ln -s clang-3.9 gcc-4.6 + ln -s clang-3.9 cpp-4.6 + ln -s clang-3.9 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-3.9 g++-4.7 + ln -s clang-3.9 gcc-4.7 + ln -s clang-3.9 cpp-4.7 + ln -s clang-3.9 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-3.9 g++-4.8 + ln -s clang-3.9 gcc-4.8 + ln -s clang-3.9 cpp-4.8 + ln -s clang-3.9 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-3.9 g++-4.9 + ln -s clang-3.9 gcc-4.9 + ln -s clang-3.9 cpp-4.9 + ln -s clang-3.9 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-3.9 g++-5 + ln -s clang-3.9 gcc-5 + ln -s clang-3.9 cpp-5 + ln -s clang-3.9 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-3.9 g++-6 + ln -s clang-3.9 gcc-6 + ln -s clang-3.9 cpp-6 + ln -s clang-3.9 gcc + echo 'gcc-6 hold' + dpkg --set-selections + echo 'g++-6 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-3.9 g++-7 + ln -s clang-3.9 gcc-7 + ln -s clang-3.9 cpp-7 + ln -s clang-3.9 gcc + echo 'gcc-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + cd - /build/qiime-eZ6WaR + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: libgnutls30 libhogweed4 libidn2-0 libnettle6 libp11-kit0 libtasn1-6 libunistring2 The following packages will be upgraded: apt cpp debconf g++ gcc libapt-pkg5.0 libdebconfclient0 libperl5.24 libsystemd0 libudev1 perl perl-base perl-modules-5.24 13 upgraded, 7 newly installed, 0 to remove and 0 not upgraded. Need to get 12.5 MB of archives. After this operation, 6330 kB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libperl5.24 amd64 5.24.1-6 [3525 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 perl amd64 5.24.1-6 [218 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 perl-base amd64 5.24.1-6 [1344 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 perl-modules-5.24 all 5.24.1-6 [2723 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libapt-pkg5.0 amd64 1.5~beta1 [922 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libnettle6 amd64 3.3-1+b1 [191 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libhogweed4 amd64 3.3-1+b1 [136 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libunistring2 amd64 0.9.7-2 [377 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 libidn2-0 amd64 0.16-1+b1 [56.6 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libp11-kit0 amd64 0.23.7-2 [193 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libtasn1-6 amd64 4.12-2 [51.0 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libgnutls30 amd64 3.5.13-2 [914 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 apt amd64 1.5~beta1 [1237 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 debconf all 1.5.62 [160 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libsystemd0 amd64 233-10 [281 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 libudev1 amd64 233-10 [126 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 libdebconfclient0 amd64 0.229 [47.9 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 cpp amd64 4:6.3.0-4d1 [18.8 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 gcc amd64 4:6.3.0-4d1 [5252 B] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 g++ amd64 4:6.3.0-4d1 [1548 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.5 MB in 0s (85.9 MB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10176 files and directories currently installed.) Preparing to unpack .../cpp_4%3a6.3.0-4d1_amd64.deb ... Unpacking cpp (4:6.3.0-4d1) over (4:6.3.0-4) ... Preparing to unpack .../gcc_4%3a6.3.0-4d1_amd64.deb ... Removing old gcc doc directory. Unpacking gcc (4:6.3.0-4d1) over (4:6.3.0-4) ... Preparing to unpack .../g++_4%3a6.3.0-4d1_amd64.deb ... Unpacking g++ (4:6.3.0-4d1) over (4:6.3.0-4) ... Setting up cpp (4:6.3.0-4d1) ... Setting up perl-modules-5.24 (5.24.1-6) ... Setting up libperl5.24:amd64 (5.24.1-6) ... Setting up gcc (4:6.3.0-4d1) ... Setting up perl (5.24.1-6) ... Processing triggers for libc-bin (2.24-12) ... Setting up g++ (4:6.3.0-4d1) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'qiime' packaging is maintained in the 'Svn' version control system at: svn://anonscm.debian.org/debian-med/trunk/packages/qiime/trunk/ Need to get 11.1 MB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main qiime 1.9.1+dfsg-1 (dsc) [2272 B] Get:2 http://127.0.0.1:9999/debian unstable/main qiime 1.9.1+dfsg-1 (tar) [11.1 MB] Get:3 http://127.0.0.1:9999/debian unstable/main qiime 1.9.1+dfsg-1 (diff) [25.0 kB] Fetched 11.1 MB in 0s (33.0 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/qiime-eZ6WaR/qiime-1.9.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/qiime-eZ6WaR' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-ZJuuvG/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-ZJuuvG/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ZJuuvG/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-ZJuuvG/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ZJuuvG/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-ZJuuvG/apt_archive ./ Packages [432 B] Fetched 1738 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 778 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-ZJuuvG/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [778 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 778 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10178 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 9), dh-python, python-all-dev (>= 2.7), python-qcli, python-cogent (>= 1.5.3), python-numpy, python-matplotlib, python-setuptools, ghc, python-sphinx, ruby-ronn Filtered Build-Depends: debhelper (>= 9), dh-python, python-all-dev (>= 2.7), python-qcli, python-cogent (>= 1.5.3), python-numpy, python-matplotlib, python-setuptools, ghc, python-sphinx, ruby-ronn dpkg-deb: building package 'sbuild-build-depends-qiime-dummy' in '/<>/resolver-ZJuuvG/apt_archive/sbuild-build-depends-qiime-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-qiime-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-ZJuuvG/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ZJuuvG/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-ZJuuvG/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ZJuuvG/apt_archive ./ Sources [564 B] Get:5 copy:/<>/resolver-ZJuuvG/apt_archive ./ Packages [645 B] Fetched 2172 B in 0s (0 B/s) Reading package lists... Reading package lists... Install qiime build dependencies (apt-based resolver) ----------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils ca-certificates debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common file fontconfig fontconfig-config fonts-lyx gettext gettext-base ghc gnome-icon-theme groff groff-base gtk-update-icon-cache hicolor-icon-theme intltool-debian libarchive-zip-perl libatk1.0-0 libatk1.0-data libavahi-client3 libavahi-common-data libavahi-common3 libblas-common libblas3 libbsd-dev libcairo2 libcroco3 libcups2 libdatrie1 libdbus-1-3 libexpat1 libexpat1-dev libffi-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran3 libglib2.0-0 libgmp-dev libgmpxx4ldbl libgraphite2-3 libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libharfbuzz0b libice6 libicu57 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libmagic-mgc libmagic1 libmarkdown2 libmpdec2 libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpipeline1 libpixman-1-0 libpng16-16 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libreadline7 librsvg2-2 librsvg2-common libruby2.3 libsigsegv2 libsm6 libsqlite3-0 libssl1.0.2 libssl1.1 libthai-data libthai0 libtiff5 libtimedate-perl libtinfo-dev libtool libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6 libxinerama1 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxt6 libyaml-0-2 lsb-base m4 man-db mime-support openssl po-debconf python python-alabaster python-all python-all-dev python-babel python-babel-localedata python-cogent python-cycler python-dateutil python-dev python-docutils python-functools32 python-imagesize python-jinja2 python-markupsafe python-matplotlib python-matplotlib-data python-minimal python-numpy python-pkg-resources python-pygments python-pyparsing python-qcli python-roman python-setuptools python-six python-sphinx python-subprocess32 python-tz python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.5 python3.5-minimal rake readline-common ruby ruby-did-you-mean ruby-fast-xs ruby-hpricot ruby-minitest ruby-mustache ruby-net-telnet ruby-power-assert ruby-rdiscount ruby-ronn ruby-test-unit ruby2.3 rubygems-integration sgml-base shared-mime-info sphinx-common ttf-bitstream-vera tzdata ucf x11-common xml-core Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev ghc-prof ghc-doc haskell-doc llvm-3.7 cups-common gmp-doc libgmp10-doc libmpfr-dev krb5-doc krb5-user gvfs libjs-jquery-ui-docs ncurses-doc librsvg2-bin libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc less www-browser libmail-box-perl python-doc python-tk python-cogent-doc cdbfasta clustalw fasttree infernal mafft mothur parsinsert raxml rdp-classifier rtax python-cycler-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-jinja2-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript inkscape ipython python-cairocffi python-configobj python-excelerator python-gobject python-gtk2 python-matplotlib-doc python-nose python-qt4 python-scipy python-sip python-tornado python-traits python-wxgtk3.0 texlive-extra-utils texlive-latex-extra ttf-staypuft gfortran python-numpy-dbg python-numpy-doc python-pyparsing-doc python-setuptools-doc python-sphinx-rtd-theme libjs-mathjax texlive-fonts-recommended texlive-generic-extra sphinx-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3.5-venv python3.5-doc readline-doc ri ruby-dev bundler sgml-base-doc Recommended packages: curl | wget | lynx-cur ghostscript imagemagick libpaper1 netpbm psutils dbus libarchive-cpio-perl libglib2.0-data xdg-user-dirs libgail-common libgtk2.0-bin javascript-common krb5-locales libltdl-dev libmail-sendmail-perl blast2 bwa cd-hit clearcut dialign muscle docutils-doc libpaper-utils python-pil python-glade2 python-imaging python-tk python-chardet zip fonts-lato The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils ca-certificates debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common file fontconfig fontconfig-config fonts-lyx gettext gettext-base ghc gnome-icon-theme groff groff-base gtk-update-icon-cache hicolor-icon-theme intltool-debian libarchive-zip-perl libatk1.0-0 libatk1.0-data libavahi-client3 libavahi-common-data libavahi-common3 libblas-common libblas3 libbsd-dev libcairo2 libcroco3 libcups2 libdatrie1 libdbus-1-3 libexpat1 libexpat1-dev libffi-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran3 libglib2.0-0 libgmp-dev libgmpxx4ldbl libgraphite2-3 libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libharfbuzz0b libice6 libicu57 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libmagic-mgc libmagic1 libmarkdown2 libmpdec2 libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpipeline1 libpixman-1-0 libpng16-16 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libreadline7 librsvg2-2 librsvg2-common libruby2.3 libsigsegv2 libsm6 libsqlite3-0 libssl1.0.2 libssl1.1 libthai-data libthai0 libtiff5 libtimedate-perl libtinfo-dev libtool libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6 libxinerama1 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxt6 libyaml-0-2 lsb-base m4 man-db mime-support openssl po-debconf python python-alabaster python-all python-all-dev python-babel python-babel-localedata python-cogent python-cycler python-dateutil python-dev python-docutils python-functools32 python-imagesize python-jinja2 python-markupsafe python-matplotlib python-matplotlib-data python-minimal python-numpy python-pkg-resources python-pygments python-pyparsing python-qcli python-roman python-setuptools python-six python-sphinx python-subprocess32 python-tz python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.5 python3.5-minimal rake readline-common ruby ruby-did-you-mean ruby-fast-xs ruby-hpricot ruby-minitest ruby-mustache ruby-net-telnet ruby-power-assert ruby-rdiscount ruby-ronn ruby-test-unit ruby2.3 rubygems-integration sbuild-build-depends-qiime-dummy sgml-base shared-mime-info sphinx-common ttf-bitstream-vera tzdata ucf x11-common xml-core 0 upgraded, 192 newly installed, 0 to remove and 0 not upgraded. Need to get 162 MB of archives. After this operation, 920 MB of additional disk space will be used. Get:1 copy:/<>/resolver-ZJuuvG/apt_archive ./ sbuild-build-depends-qiime-dummy 0.invalid.0 [856 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-9 [1160 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 9.0.12+nmu1 [186 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.4.1-2 [27.6 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.7.6.1-2 [1044 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-minimal amd64 2.7.13-2 [389 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-minimal amd64 2.7.13-2 [1383 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 python-minimal amd64 2.7.13-2 [40.5 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 mime-support all 3.60 [36.7 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.1-3 [85.6 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 7.0-3 [70.4 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libreadline7 amd64 7.0-3 [151 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.16.2-5 [572 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.1 amd64 1.1.0f-3 [1342 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-stdlib amd64 2.7.13-2 [1895 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 python2.7 amd64 2.7.13-2 [285 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 libpython-stdlib amd64 2.7.13-2 [20.0 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 python amd64 2.7.13-2 [154 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 libpng16-16 amd64 1.6.29-3 [281 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 libfreetype6 amd64 2.8-0.2 [449 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 ucf all 3.0036 [70.2 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 ttf-bitstream-vera all 1.10-8 [352 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig-config all 2.12.3-0.1 [303 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 libfontconfig1 amd64 2.12.3-0.1 [366 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig amd64 2.12.3-0.1 [436 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.1.2+dfsg-1 [22.2 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 libgmp-dev amd64 2:6.1.2+dfsg-1 [631 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 libffi-dev amd64 3.2.1-6 [161 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 libbsd-dev amd64 0.8.5-1 [200 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 libtinfo-dev amd64 6.0+20161126-1 [78.8 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5-dev amd64 6.0+20161126-1 [175 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 ghc amd64 8.0.2-5 [44.9 MB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1 [20.7 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-minimal amd64 3.5.3-3 [577 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 python3.5-minimal amd64 3.5.3-3 [1695 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 python3-minimal amd64 3.5.3-3 [35.4 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 libmpdec2 amd64 2.4.2-1 [85.2 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-stdlib amd64 3.5.3-3 [2170 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 python3.5 amd64 3.5.3-3 [237 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 libpython3-stdlib amd64 3.5.3-3 [18.8 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 dh-python all 2.20170125 [86.8 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 python3 amd64 3.5.3-3 [21.8 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 sgml-base all 1.29 [14.8 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 lsb-base all 9.20161125 [27.9 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 tzdata all 2017b-2 [260 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.0.2 amd64 1.0.2l-2 [1294 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.30-1 [222 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.30-1 [111 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.30-1 [63.9 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-2+b1 [122 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 libkeyutils1 amd64 1.5.9-9 [12.4 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5support0 amd64 1.15-1 [61.7 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 libk5crypto3 amd64 1.15-1 [119 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5-3 amd64 1.15-1 [311 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.15-1 [154 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-6 [7701 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-3 [715 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.11-1 [29.9 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-10 [338 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20161112.1 [73.4 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-2 [736 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-2 [433 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 openssl amd64 1.1.0f-3 [725 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 ca-certificates all 20161130+nmu1 [196 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2 [545 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 14 [15.9 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.59-1 [95.5 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.035-2 [17.0 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.035-2 [10.7 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.52.3-1 [2742 kB] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-1 [144 kB] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-2+b1 [1301 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 10.6.2 [968 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 xml-core all 0.17 [23.2 kB] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 docutils-common all 0.13.1+dfsg-2 [200 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 fonts-lyx all 2.2.3-1 [197 kB] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 hicolor-icon-theme all 0.15-1 [9550 B] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.1-2 [134 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5 amd64 4.0.8-3 [237 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libxcb1 amd64 1.12-1 [133 kB] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 libx11-data all 2:1.6.4-3 [290 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libx11-6 amd64 2:1.6.4-3 [747 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 shared-mime-info amd64 1.8-1 [731 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libgdk-pixbuf2.0-common all 2.36.5-2 [310 kB] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 libgdk-pixbuf2.0-0 amd64 2.36.5-2 [169 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 gtk-update-icon-cache amd64 3.22.16-1 [76.7 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 libpixman-1-0 amd64 0.34.0-1 [530 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-render0 amd64 1.12-1 [105 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-shm0 amd64 1.12-1 [95.9 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 libcairo2 amd64 1.14.10-1 [774 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 libthai-data all 0.1.26-1 [166 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 libdatrie1 amd64 0.2.10-4+b1 [36.4 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 libthai0 amd64 0.1.26-1 [52.1 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 libpango-1.0-0 amd64 1.40.6-1 [182 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 libgraphite2-3 amd64 1.3.10-2 [84.3 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 libharfbuzz0b amd64 1.4.2-1 [671 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.40.6-1 [67.0 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.40.6-1 [54.8 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 librsvg2-2 amd64 2.40.16-1+b1 [281 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 librsvg2-common amd64 2.40.16-1+b1 [194 kB] Get:109 http://127.0.0.1:9999/debian unstable/main amd64 gnome-icon-theme all 3.12.0-2 [9890 kB] Get:110 http://127.0.0.1:9999/debian unstable/main amd64 x11-common all 1:7.7+19 [251 kB] Get:111 http://127.0.0.1:9999/debian unstable/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:112 http://127.0.0.1:9999/debian unstable/main amd64 libsm6 amd64 2:1.2.2-1+b3 [33.3 kB] Get:113 http://127.0.0.1:9999/debian unstable/main amd64 libxt6 amd64 1:1.1.5-1 [188 kB] Get:114 http://127.0.0.1:9999/debian unstable/main amd64 libxmu6 amd64 2:1.1.2-2 [60.3 kB] Get:115 http://127.0.0.1:9999/debian unstable/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:116 http://127.0.0.1:9999/debian unstable/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get:117 http://127.0.0.1:9999/debian unstable/main amd64 groff amd64 1.22.3-9 [3161 kB] Get:118 http://127.0.0.1:9999/debian unstable/main amd64 libatk1.0-data all 2.22.0-1 [172 kB] Get:119 http://127.0.0.1:9999/debian unstable/main amd64 libatk1.0-0 amd64 2.22.0-1 [78.4 kB] Get:120 http://127.0.0.1:9999/debian unstable/main amd64 libavahi-common-data amd64 0.6.32-2 [118 kB] Get:121 http://127.0.0.1:9999/debian unstable/main amd64 libavahi-common3 amd64 0.6.32-2 [52.0 kB] Get:122 http://127.0.0.1:9999/debian unstable/main amd64 libdbus-1-3 amd64 1.10.20-1 [193 kB] Get:123 http://127.0.0.1:9999/debian unstable/main amd64 libavahi-client3 amd64 0.6.32-2 [55.3 kB] Get:124 http://127.0.0.1:9999/debian unstable/main amd64 libblas-common amd64 3.7.1-1 [14.6 kB] Get:125 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran3 amd64 6.4.0-1 [265 kB] Get:126 http://127.0.0.1:9999/debian unstable/main amd64 libblas3 amd64 3.7.1-1 [156 kB] Get:127 http://127.0.0.1:9999/debian unstable/main amd64 libcups2 amd64 2.2.4-1 [313 kB] Get:128 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1-dev amd64 2.2.1-3 [137 kB] Get:129 http://127.0.0.1:9999/debian unstable/main amd64 libgtk2.0-common all 2.24.31-2 [2693 kB] Get:130 http://127.0.0.1:9999/debian unstable/main amd64 libxcomposite1 amd64 1:0.4.4-2 [16.5 kB] Get:131 http://127.0.0.1:9999/debian unstable/main amd64 libxfixes3 amd64 1:5.0.3-1 [21.9 kB] Get:132 http://127.0.0.1:9999/debian unstable/main amd64 libxcursor1 amd64 1:1.1.14-1+b4 [35.0 kB] Get:133 http://127.0.0.1:9999/debian unstable/main amd64 libxdamage1 amd64 1:1.1.4-2+b3 [14.5 kB] Get:134 http://127.0.0.1:9999/debian unstable/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB] Get:135 http://127.0.0.1:9999/debian unstable/main amd64 libxinerama1 amd64 2:1.1.3-1+b3 [16.7 kB] Get:136 http://127.0.0.1:9999/debian unstable/main amd64 libxrandr2 amd64 2:1.5.1-1 [37.5 kB] Get:137 http://127.0.0.1:9999/debian unstable/main amd64 libgtk2.0-0 amd64 2.24.31-2 [1800 kB] Get:138 http://127.0.0.1:9999/debian unstable/main amd64 libjs-jquery all 3.1.1-2 [154 kB] Get:139 http://127.0.0.1:9999/debian unstable/main amd64 libjs-jquery-ui all 1.12.1+dfsg-4 [232 kB] Get:140 http://127.0.0.1:9999/debian unstable/main amd64 libjs-underscore all 1.8.3~dfsg-1 [63.8 kB] Get:141 http://127.0.0.1:9999/debian unstable/main amd64 libjs-sphinxdoc all 1.4.9-2 [69.5 kB] Get:142 http://127.0.0.1:9999/debian unstable/main amd64 liblapack3 amd64 3.7.1-1 [2141 kB] Get:143 http://127.0.0.1:9999/debian unstable/main amd64 libmarkdown2 amd64 2.2.2-1 [35.3 kB] Get:144 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7 amd64 2.7.13-2 [1072 kB] Get:145 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-dev amd64 2.7.13-2 [28.2 MB] Get:146 http://127.0.0.1:9999/debian unstable/main amd64 libpython-dev amd64 2.7.13-2 [20.1 kB] Get:147 http://127.0.0.1:9999/debian unstable/main amd64 libpython-all-dev amd64 2.7.13-2 [960 B] Get:148 http://127.0.0.1:9999/debian unstable/main amd64 rubygems-integration all 1.11 [4994 B] Get:149 http://127.0.0.1:9999/debian unstable/main amd64 ruby2.3 amd64 2.3.3-1 [186 kB] Get:150 http://127.0.0.1:9999/debian unstable/main amd64 ruby amd64 1:2.3.3 [10.8 kB] Get:151 http://127.0.0.1:9999/debian unstable/main amd64 rake all 12.0.0-1 [45.7 kB] Get:152 http://127.0.0.1:9999/debian unstable/main amd64 ruby-did-you-mean all 1.0.0-2 [11.2 kB] Get:153 http://127.0.0.1:9999/debian unstable/main amd64 ruby-minitest all 5.10.2-1 [52.2 kB] Get:154 http://127.0.0.1:9999/debian unstable/main amd64 ruby-net-telnet all 0.1.1-2 [12.5 kB] Get:155 http://127.0.0.1:9999/debian unstable/main amd64 ruby-power-assert all 0.3.0-1 [7902 B] Get:156 http://127.0.0.1:9999/debian unstable/main amd64 ruby-test-unit all 3.2.5-1 [71.7 kB] Get:157 http://127.0.0.1:9999/debian unstable/main amd64 libyaml-0-2 amd64 0.1.7-2 [47.6 kB] Get:158 http://127.0.0.1:9999/debian unstable/main amd64 libruby2.3 amd64 2.3.3-1 [3104 kB] Get:159 http://127.0.0.1:9999/debian unstable/main amd64 python-alabaster all 0.7.8-1 [18.4 kB] Get:160 http://127.0.0.1:9999/debian unstable/main amd64 python-all amd64 2.7.13-2 [942 B] Get:161 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-dev amd64 2.7.13-2 [281 kB] Get:162 http://127.0.0.1:9999/debian unstable/main amd64 python-dev amd64 2.7.13-2 [1126 B] Get:163 http://127.0.0.1:9999/debian unstable/main amd64 python-all-dev amd64 2.7.13-2 [962 B] Get:164 http://127.0.0.1:9999/debian unstable/main amd64 python-babel-localedata all 2.4.0+dfsg.1-2 [3415 kB] Get:165 http://127.0.0.1:9999/debian unstable/main amd64 python-pkg-resources all 36.0.1-1 [168 kB] Get:166 http://127.0.0.1:9999/debian unstable/main amd64 python-tz all 2017.2-2 [33.9 kB] Get:167 http://127.0.0.1:9999/debian unstable/main amd64 python-babel all 2.4.0+dfsg.1-2 [84.3 kB] Get:168 http://127.0.0.1:9999/debian unstable/main amd64 python-numpy amd64 1:1.12.1-3+b2 [1936 kB] Get:169 http://127.0.0.1:9999/debian unstable/main amd64 python-six all 1.10.0-4 [14.4 kB] Get:170 http://127.0.0.1:9999/debian unstable/main amd64 python-dateutil all 2.5.3-2 [51.3 kB] Get:171 http://127.0.0.1:9999/debian unstable/main amd64 python-matplotlib-data all 2.0.0+dfsg1-2 [4414 kB] Get:172 http://127.0.0.1:9999/debian unstable/main amd64 python-pyparsing all 2.1.10+dfsg1-1 [88.5 kB] Get:173 http://127.0.0.1:9999/debian unstable/main amd64 python-cycler all 0.10.0-1 [7448 B] Get:174 http://127.0.0.1:9999/debian unstable/main amd64 python-functools32 all 3.2.3.2-3 [11.0 kB] Get:175 http://127.0.0.1:9999/debian unstable/main amd64 python-subprocess32 amd64 3.2.7-2 [28.9 kB] Get:176 http://127.0.0.1:9999/debian unstable/main amd64 python-matplotlib amd64 2.0.0+dfsg1-2+b1 [1598 kB] Get:177 http://127.0.0.1:9999/debian unstable/main amd64 python-cogent amd64 1.9-11 [2466 kB] Get:178 http://127.0.0.1:9999/debian unstable/main amd64 python-roman all 2.0.0-2 [8130 B] Get:179 http://127.0.0.1:9999/debian unstable/main amd64 python-docutils all 0.13.1+dfsg-2 [373 kB] Get:180 http://127.0.0.1:9999/debian unstable/main amd64 python-imagesize all 0.7.1-1 [3814 B] Get:181 http://127.0.0.1:9999/debian unstable/main amd64 python-markupsafe amd64 1.0-1+b1 [13.9 kB] Get:182 http://127.0.0.1:9999/debian unstable/main amd64 python-jinja2 all 2.9.6-1 [117 kB] Get:183 http://127.0.0.1:9999/debian unstable/main amd64 python-pygments all 2.2.0+dfsg-1 [590 kB] Get:184 http://127.0.0.1:9999/debian unstable/main amd64 python-qcli amd64 0.1.1-1 [13.6 kB] Get:185 http://127.0.0.1:9999/debian unstable/main amd64 python-setuptools all 36.0.1-1 [301 kB] Get:186 http://127.0.0.1:9999/debian unstable/main amd64 sphinx-common all 1.4.9-2 [350 kB] Get:187 http://127.0.0.1:9999/debian unstable/main amd64 python-sphinx all 1.4.9-2 [434 kB] Get:188 http://127.0.0.1:9999/debian unstable/main amd64 ruby-fast-xs amd64 0.8.0-3+b8 [8988 B] Get:189 http://127.0.0.1:9999/debian unstable/main amd64 ruby-hpricot amd64 0.8.6-6+b2 [70.3 kB] Get:190 http://127.0.0.1:9999/debian unstable/main amd64 ruby-mustache all 1.0.2-1 [25.1 kB] Get:191 http://127.0.0.1:9999/debian unstable/main amd64 ruby-rdiscount amd64 2.1.8-1+b3 [40.1 kB] Get:192 http://127.0.0.1:9999/debian unstable/main amd64 ruby-ronn all 0.7.3-5 [29.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 162 MB in 3s (50.4 MB/s) Selecting previously unselected package groff-base. (Reading database ... 10178 files and directories currently installed.) Preparing to unpack .../00-groff-base_1.22.3-9_amd64.deb ... Unpacking groff-base (1.22.3-9) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_9.0.12+nmu1_amd64.deb ... Unpacking bsdmainutils (9.0.12+nmu1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../02-libpipeline1_1.4.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.4.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../03-man-db_2.7.6.1-2_amd64.deb ... Unpacking man-db (2.7.6.1-2) ... Selecting previously unselected package libpython2.7-minimal:amd64. Preparing to unpack .../04-libpython2.7-minimal_2.7.13-2_amd64.deb ... Unpacking libpython2.7-minimal:amd64 (2.7.13-2) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../05-python2.7-minimal_2.7.13-2_amd64.deb ... Unpacking python2.7-minimal (2.7.13-2) ... Selecting previously unselected package python-minimal. Preparing to unpack .../06-python-minimal_2.7.13-2_amd64.deb ... Unpacking python-minimal (2.7.13-2) ... Selecting previously unselected package mime-support. Preparing to unpack .../07-mime-support_3.60_all.deb ... Unpacking mime-support (3.60) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../08-libexpat1_2.2.1-3_amd64.deb ... Unpacking libexpat1:amd64 (2.2.1-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../09-readline-common_7.0-3_all.deb ... Unpacking readline-common (7.0-3) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../10-libreadline7_7.0-3_amd64.deb ... Unpacking libreadline7:amd64 (7.0-3) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../11-libsqlite3-0_3.16.2-5_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.16.2-5) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../12-libssl1.1_1.1.0f-3_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.0f-3) ... Selecting previously unselected package libpython2.7-stdlib:amd64. Preparing to unpack .../13-libpython2.7-stdlib_2.7.13-2_amd64.deb ... Unpacking libpython2.7-stdlib:amd64 (2.7.13-2) ... Selecting previously unselected package python2.7. Preparing to unpack .../14-python2.7_2.7.13-2_amd64.deb ... Unpacking python2.7 (2.7.13-2) ... Selecting previously unselected package libpython-stdlib:amd64. Preparing to unpack .../15-libpython-stdlib_2.7.13-2_amd64.deb ... Unpacking libpython-stdlib:amd64 (2.7.13-2) ... Setting up libpython2.7-minimal:amd64 (2.7.13-2) ... Setting up python2.7-minimal (2.7.13-2) ... Setting up python-minimal (2.7.13-2) ... Selecting previously unselected package python. (Reading database ... 11558 files and directories currently installed.) Preparing to unpack .../00-python_2.7.13-2_amd64.deb ... Unpacking python (2.7.13-2) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../01-libpng16-16_1.6.29-3_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.29-3) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../02-libfreetype6_2.8-0.2_amd64.deb ... Unpacking libfreetype6:amd64 (2.8-0.2) ... Selecting previously unselected package ucf. Preparing to unpack .../03-ucf_3.0036_all.deb ... Moving old data out of the way Unpacking ucf (3.0036) ... Selecting previously unselected package ttf-bitstream-vera. Preparing to unpack .../04-ttf-bitstream-vera_1.10-8_all.deb ... Unpacking ttf-bitstream-vera (1.10-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../05-fontconfig-config_2.12.3-0.1_all.deb ... Unpacking fontconfig-config (2.12.3-0.1) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../06-libfontconfig1_2.12.3-0.1_amd64.deb ... Unpacking libfontconfig1:amd64 (2.12.3-0.1) ... Selecting previously unselected package fontconfig. Preparing to unpack .../07-fontconfig_2.12.3-0.1_amd64.deb ... Unpacking fontconfig (2.12.3-0.1) ... Selecting previously unselected package libgmpxx4ldbl:amd64. Preparing to unpack .../08-libgmpxx4ldbl_2%3a6.1.2+dfsg-1_amd64.deb ... Unpacking libgmpxx4ldbl:amd64 (2:6.1.2+dfsg-1) ... Selecting previously unselected package libgmp-dev:amd64. Preparing to unpack .../09-libgmp-dev_2%3a6.1.2+dfsg-1_amd64.deb ... Unpacking libgmp-dev:amd64 (2:6.1.2+dfsg-1) ... Selecting previously unselected package libffi-dev:amd64. Preparing to unpack .../10-libffi-dev_3.2.1-6_amd64.deb ... Unpacking libffi-dev:amd64 (3.2.1-6) ... Selecting previously unselected package libbsd-dev:amd64. Preparing to unpack .../11-libbsd-dev_0.8.5-1_amd64.deb ... Unpacking libbsd-dev:amd64 (0.8.5-1) ... Selecting previously unselected package libtinfo-dev:amd64. Preparing to unpack .../12-libtinfo-dev_6.0+20161126-1_amd64.deb ... Unpacking libtinfo-dev:amd64 (6.0+20161126-1) ... Selecting previously unselected package libncurses5-dev:amd64. Preparing to unpack .../13-libncurses5-dev_6.0+20161126-1_amd64.deb ... Unpacking libncurses5-dev:amd64 (6.0+20161126-1) ... Selecting previously unselected package ghc. Preparing to unpack .../14-ghc_8.0.2-5_amd64.deb ... Unpacking ghc (8.0.2-5) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../15-libxau6_1%3a1.0.8-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.8-1) ... Selecting previously unselected package libpython3.5-minimal:amd64. Preparing to unpack .../16-libpython3.5-minimal_3.5.3-3_amd64.deb ... Unpacking libpython3.5-minimal:amd64 (3.5.3-3) ... Selecting previously unselected package python3.5-minimal. Preparing to unpack .../17-python3.5-minimal_3.5.3-3_amd64.deb ... Unpacking python3.5-minimal (3.5.3-3) ... Selecting previously unselected package python3-minimal. Preparing to unpack .../18-python3-minimal_3.5.3-3_amd64.deb ... Unpacking python3-minimal (3.5.3-3) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../19-libmpdec2_2.4.2-1_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.2-1) ... Selecting previously unselected package libpython3.5-stdlib:amd64. Preparing to unpack .../20-libpython3.5-stdlib_3.5.3-3_amd64.deb ... Unpacking libpython3.5-stdlib:amd64 (3.5.3-3) ... Selecting previously unselected package python3.5. Preparing to unpack .../21-python3.5_3.5.3-3_amd64.deb ... Unpacking python3.5 (3.5.3-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../22-libpython3-stdlib_3.5.3-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.5.3-3) ... Selecting previously unselected package dh-python. Preparing to unpack .../23-dh-python_2.20170125_all.deb ... Unpacking dh-python (2.20170125) ... Setting up libssl1.1:amd64 (1.1.0f-3) ... Setting up libpython3.5-minimal:amd64 (3.5.3-3) ... Setting up libexpat1:amd64 (2.2.1-3) ... Setting up python3.5-minimal (3.5.3-3) ... Setting up python3-minimal (3.5.3-3) ... Selecting previously unselected package python3. (Reading database ... 15550 files and directories currently installed.) Preparing to unpack .../000-python3_3.5.3-3_amd64.deb ... Unpacking python3 (3.5.3-3) ... Selecting previously unselected package sgml-base. Preparing to unpack .../001-sgml-base_1.29_all.deb ... Unpacking sgml-base (1.29) ... Selecting previously unselected package lsb-base. Preparing to unpack .../002-lsb-base_9.20161125_all.deb ... Unpacking lsb-base (9.20161125) ... Selecting previously unselected package tzdata. Preparing to unpack .../003-tzdata_2017b-2_all.deb ... Unpacking tzdata (2017b-2) ... Selecting previously unselected package libssl1.0.2:amd64. Preparing to unpack .../004-libssl1.0.2_1.0.2l-2_amd64.deb ... Unpacking libssl1.0.2:amd64 (1.0.2l-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.30-1_amd64.deb ... Unpacking libmagic-mgc (1:5.30-1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../006-libmagic1_1%3a5.30-1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.30-1) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.30-1_amd64.deb ... Unpacking file (1:5.30-1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.19.8.1-2+b1_amd64.deb ... Unpacking gettext-base (0.19.8.1-2+b1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../009-libkeyutils1_1.5.9-9_amd64.deb ... Unpacking libkeyutils1:amd64 (1.5.9-9) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../010-libkrb5support0_1.15-1_amd64.deb ... 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Selecting previously unselected package sbuild-build-depends-qiime-dummy. Preparing to unpack .../151-sbuild-build-depends-qiime-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-qiime-dummy (0.invalid.0) ... Setting up libjs-jquery (3.1.1-2) ... Setting up readline-common (7.0-3) ... Setting up libgtk2.0-common (2.24.31-2) ... Setting up libjpeg62-turbo:amd64 (1:1.5.1-2) ... Setting up libarchive-zip-perl (1.59-1) ... Setting up libjs-underscore (1.8.3~dfsg-1) ... Setting up mime-support (3.60) ... Setting up libpng16-16:amd64 (1.6.29-3) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libsigsegv2:amd64 (2.11-1) ... Setting up libreadline7:amd64 (7.0-3) ... Setting up libblas-common (3.7.1-1) ... Setting up libbsd-dev:amd64 (0.8.5-1) ... Setting up tzdata (2017b-2) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Jul 6 19:53:12 UTC 2017. Universal Time is now: Thu Jul 6 19:53:12 UTC 2017. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libgfortran3:amd64 (6.4.0-1) ... Setting up groff-base (1.22.3-9) ... Setting up libglib2.0-0:amd64 (2.52.3-1) ... No schema files found: doing nothing. Setting up libtinfo-dev:amd64 (6.0+20161126-1) ... Setting up libjs-sphinxdoc (1.4.9-2) ... Setting up libffi-dev:amd64 (3.2.1-6) ... Setting up libgdk-pixbuf2.0-common (2.36.5-2) ... Setting up libdatrie1:amd64 (0.2.10-4+b1) ... Setting up libtiff5:amd64 (4.0.8-3) ... Setting up gettext-base (0.19.8.1-2+b1) ... Setting up libpipeline1:amd64 (1.4.1-2) ... Setting up m4 (1.4.18-1) ... Setting up sgml-base (1.29) ... Setting up libicu57:amd64 (57.1-6) ... Setting up ucf (3.0036) ... Setting up libxml2:amd64 (2.9.4+dfsg1-3) ... Setting up libfreetype6:amd64 (2.8-0.2) ... Setting up libmagic-mgc (1:5.30-1) ... Setting up libmagic1:amd64 (1:5.30-1) ... Setting up lsb-base (9.20161125) ... Setting up libgraphite2-3:amd64 (1.3.10-2) ... Setting up libcroco3:amd64 (0.6.12-1) ... Setting up libncurses5-dev:amd64 (6.0+20161126-1) ... Setting up libssl1.0.2:amd64 (1.0.2l-2) ... Setting up libatk1.0-data (2.22.0-1) ... Setting up ruby-did-you-mean (1.0.0-2) ... Setting up libyaml-0-2:amd64 (0.1.7-2) ... Setting up libpixman-1-0:amd64 (0.34.0-1) ... Setting up libblas3 (3.7.1-1) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Processing triggers for libc-bin (2.24-12) ... Setting up autotools-dev (20161112.1) ... Setting up libatk1.0-0:amd64 (2.22.0-1) ... Setting up python-babel-localedata (2.4.0+dfsg.1-2) ... Setting up libjs-jquery-ui (1.12.1+dfsg-4) ... Setting up openssl (1.1.0f-3) ... Setting up ruby-net-telnet (0.1.1-2) ... Setting up sphinx-common (1.4.9-2) ... Setting up libsqlite3-0:amd64 (3.16.2-5) ... Setting up libexpat1-dev:amd64 (2.2.1-3) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up shared-mime-info (1.8-1) ... Setting up libmarkdown2:amd64 (2.2.2-1) ... Setting up libthai-data (0.1.26-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up xml-core (0.17) ... Setting up libkeyutils1:amd64 (1.5.9-9) ... Setting up bsdmainutils (9.0.12+nmu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgmpxx4ldbl:amd64 (2:6.1.2+dfsg-1) ... Setting up ruby-minitest (5.10.2-1) ... Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up ca-certificates (20161130+nmu1) ... Updating certificates in /etc/ssl/certs... 166 added, 0 removed; done. Setting up hicolor-icon-theme (0.15-1) ... Setting up libx11-data (2:1.6.4-3) ... Setting up libpython2.7-stdlib:amd64 (2.7.13-2) ... Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-2) ... Setting up libmpdec2:amd64 (2.4.2-1) ... Setting up libdbus-1-3:amd64 (1.10.20-1) ... Setting up ruby-power-assert (0.3.0-1) ... Setting up libavahi-common-data:amd64 (0.6.32-2) ... Setting up fonts-lyx (2.2.3-1) ... Setting up libfile-stripnondeterminism-perl (0.035-2) ... Setting up libgmp-dev:amd64 (2:6.1.2+dfsg-1) ... Setting up fontconfig-config (2.12.3-0.1) ... Setting up python-matplotlib-data (2.0.0+dfsg1-2) ... Setting up gettext (0.19.8.1-2+b1) ... Setting up ghc (8.0.2-5) ... update-alternatives: using /usr/bin/runghc to provide /usr/bin/runhaskell (runhaskell) in auto mode update-alternatives: using /usr/bin/ghc to provide /usr/bin/haskell-compiler (haskell-compiler) in auto mode Setting up liblapack3 (3.7.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libpython3.5-stdlib:amd64 (3.5.3-3) ... Setting up python2.7 (2.7.13-2) ... Setting up libharfbuzz0b:amd64 (1.4.2-1) ... Setting up autoconf (2.69-10) ... Setting up libthai0:amd64 (0.1.26-1) ... Setting up file (1:5.30-1) ... Setting up libkrb5support0:amd64 (1.15-1) ... Setting up libpython-stdlib:amd64 (2.7.13-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libpython2.7:amd64 (2.7.13-2) ... Setting up automake (1:1.15.1-2) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libice6:amd64 (2:1.0.9-2) ... Setting up rubygems-integration (1.11) ... Setting up man-db (2.7.6.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2.7-dev:amd64 (2.7.13-2) ... Setting up libavahi-common3:amd64 (0.6.32-2) ... Setting up python2.7-dev (2.7.13-2) ... Setting up libxcb1:amd64 (1.12-1) ... Setting up python (2.7.13-2) ... Setting up python-pyparsing (2.1.10+dfsg1-1) ... Setting up libtool (2.4.6-2) ... Setting up python3.5 (3.5.3-3) ... Setting up libpython3-stdlib:amd64 (3.5.3-3) ... Setting up libpython-dev:amd64 (2.7.13-2) ... Setting up libfontconfig1:amd64 (2.12.3-0.1) ... Setting up libsm6:amd64 (2:1.2.2-1+b3) ... Setting up libk5crypto3:amd64 (1.15-1) ... Setting up python-functools32 (3.2.3.2-3) ... Setting up libxcb-render0:amd64 (1.12-1) ... Setting up po-debconf (1.0.20) ... Setting up python-dev (2.7.13-2) ... Setting up python-tz (2017.2-2) ... Setting up libx11-6:amd64 (2:1.6.4-3) ... Setting up libpython-all-dev:amd64 (2.7.13-2) ... Setting up python-imagesize (0.7.1-1) ... Setting up python-alabaster (0.7.8-1) ... Setting up python-qcli (0.1.1-1) ... Setting up python-pkg-resources (36.0.1-1) ... Setting up python-roman (2.0.0-2) ... Setting up python-markupsafe (1.0-1+b1) ... Setting up python-numpy (1:1.12.1-3+b2) ... Setting up python-six (1.10.0-4) ... Setting up python-pygments (2.2.0+dfsg-1) ... Setting up libxcomposite1:amd64 (1:0.4.4-2) ... Setting up libxcb-shm0:amd64 (1.12-1) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libavahi-client3:amd64 (0.6.32-2) ... Setting up libkrb5-3:amd64 (1.15-1) ... Setting up python-subprocess32 (3.2.7-2) ... Setting up python-all (2.7.13-2) ... Setting up fontconfig (2.12.3-0.1) ... Regenerating fonts cache... done. Setting up python-setuptools (36.0.1-1) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libxfixes3:amd64 (1:5.0.3-1) ... Setting up python-jinja2 (2.9.6-1) ... Setting up python-babel (2.4.0+dfsg.1-2) ... update-alternatives: using /usr/bin/pybabel-python2 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up libgdk-pixbuf2.0-0:amd64 (2.36.5-2) ... Setting up python-cycler (0.10.0-1) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up libgssapi-krb5-2:amd64 (1.15-1) ... Setting up python-dateutil (2.5.3-2) ... Setting up gtk-update-icon-cache (3.22.16-1) ... Setting up libxcursor1:amd64 (1:1.1.14-1+b4) ... Setting up python-all-dev (2.7.13-2) ... Setting up libpango-1.0-0:amd64 (1.40.6-1) ... Setting up libxrandr2:amd64 (2:1.5.1-1) ... Setting up libcups2:amd64 (2.2.4-1) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libxaw7:amd64 (2:1.0.13-1+b2) ... Setting up libcairo2:amd64 (1.14.10-1) ... Setting up libxinerama1:amd64 (2:1.1.3-1+b3) ... Setting up libxdamage1:amd64 (1:1.1.4-2+b3) ... Setting up libpangoft2-1.0-0:amd64 (1.40.6-1) ... Setting up groff (1.22.3-9) ... Setting up libpangocairo-1.0-0:amd64 (1.40.6-1) ... Setting up librsvg2-2:amd64 (2.40.16-1+b1) ... Setting up librsvg2-common:amd64 (2.40.16-1+b1) ... Setting up gnome-icon-theme (3.12.0-2) ... update-alternatives: using /usr/share/icons/gnome/scalable/places/debian-swirl.svg to provide /usr/share/icons/gnome/scalable/places/start-here.svg (start-here.svg) in auto mode Setting up libgtk2.0-0:amd64 (2.24.31-2) ... Setting up python-matplotlib (2.0.0+dfsg1-2+b1) ... Setting up python-cogent (1.9-11) ... Processing triggers for sgml-base (1.29) ... Setting up docutils-common (0.13.1+dfsg-2) ... Processing triggers for sgml-base (1.29) ... Setting up python-docutils (0.13.1+dfsg-2) ... update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python-sphinx (1.4.9-2) ... Setting up python3 (3.5.3-3) ... Setting up rake (12.0.0-1) ... Setting up libruby2.3:amd64 (2.3.3-1) ... Setting up dh-python (2.20170125) ... Setting up dh-autoreconf (14) ... Setting up ruby2.3 (2.3.3-1) ... Setting up dh-strip-nondeterminism (0.035-2) ... Setting up ruby (1:2.3.3) ... Setting up ruby-rdiscount (2.1.8-1+b3) ... Setting up debhelper (10.6.2) ... Setting up ruby-mustache (1.0.2-1) ... Setting up ruby-test-unit (3.2.5-1) ... Setting up ruby-fast-xs (0.8.0-3+b8) ... Setting up ruby-hpricot (0.8.6-6+b2) ... Setting up ruby-ronn (0.7.3-5) ... Setting up sbuild-build-depends-qiime-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.24-12) ... Processing triggers for ca-certificates (20161130+nmu1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.36.5-2) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-2-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.28-6 dpkg-dev_1.18.24 g++-6_6.4.0-1 gcc-6_6.4.0-1 libc6-dev_2.24-12 libstdc++-6-dev_6.4.0-1 libstdc++6_7.1.0-9 linux-libc-dev_4.11.6-1 Package versions: adduser_3.115 apt_1.5~beta1 autoconf_2.69-10 automake_1:1.15.1-2 autopoint_0.19.8.1-2 autotools-dev_20161112.1 base-files_10 base-passwd_3.5.43 bash_4.4-5 binutils_2.28-6 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-1 build-essential_12.3 bzip2_1.0.6-8.1 ca-certificates_20161130+nmu1 clang-3.9_1:3.9.1-10 coreutils_8.26-3 cpp_4:6.3.0-4d1 cpp-6_6.4.0-1 dash_0.5.8-2.4 debconf_1.5.62 debfoster_2.7-2.1+b1 debhelper_10.6.2 debian-archive-keyring_2017.5 debianutils_4.8.1.1 dh-autoreconf_14 dh-python_2.20170125 dh-strip-nondeterminism_0.035-2 diffutils_1:3.5-3 docutils-common_0.13.1+dfsg-2 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.4-2 e2fsprogs_1.43.4-2 eatmydata_105-5 fakeroot_1.21-3.1 file_1:5.30-1 findutils_4.6.0+git+20170606-2 fontconfig_2.12.3-0.1 fontconfig-config_2.12.3-0.1 fonts-lyx_2.2.3-1 g++_4:6.3.0-4d1 g++-6_6.4.0-1 gcc_4:6.3.0-4d1 gcc-6_6.4.0-1 gcc-6-base_6.4.0-1 gcc-7-base_7.1.0-9 gettext_0.19.8.1-2+b1 gettext-base_0.19.8.1-2+b1 ghc_8.0.2-5 gnome-icon-theme_3.12.0-2 gpgv_2.1.18-8 grep_2.27-2 groff_1.22.3-9 groff-base_1.22.3-9 gtk-update-icon-cache_3.22.16-1 gzip_1.6-5+b1 hicolor-icon-theme_0.15-1 hostname_3.18+b1 init-system-helpers_1.48 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3+b1 libapt-pkg5.0_1.5~beta1 libarchive-zip-perl_1.59-1 libasan3_6.4.0-1 libatk1.0-0_2.22.0-1 libatk1.0-data_2.22.0-1 libatomic1_7.1.0-9 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1+b1 libavahi-client3_0.6.32-2 libavahi-common-data_0.6.32-2 libavahi-common3_0.6.32-2 libblas-common_3.7.1-1 libblas3_3.7.1-1 libblkid1_2.29.2-1 libbsd-dev_0.8.5-1 libbsd0_0.8.5-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-12 libc-dev-bin_2.24-12 libc6_2.24-12 libc6-dev_2.24-12 libcairo2_1.14.10-1 libcap-ng0_0.7.7-3+b1 libcc1-0_7.1.0-9 libcilkrts5_7.1.0-9 libclang-common-3.9-dev_1:3.9.1-10 libclang1-3.9_1:3.9.1-10 libcomerr2_1.43.4-2 libcroco3_0.6.12-1 libcups2_2.2.4-1 libdatrie1_0.2.10-4+b1 libdb5.3_5.3.28-12+b1 libdbus-1-3_1.10.20-1 libdebconfclient0_0.229 libdpkg-perl_1.18.24 libeatmydata1_105-5 libedit2_3.1-20170329-1 libexpat1_2.2.1-3 libexpat1-dev_2.2.1-3 libfakeroot_1.21-3.1 libfdisk1_2.29.2-1 libffi-dev_3.2.1-6 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.035-2 libfontconfig1_2.12.3-0.1 libfreetype6_2.8-0.2 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.4.0-1 libgcc1_1:7.1.0-9 libgcrypt20_1.7.8-1 libgdbm3_1.8.3-14 libgdk-pixbuf2.0-0_2.36.5-2 libgdk-pixbuf2.0-common_2.36.5-2 libgfortran3_6.4.0-1 libglib2.0-0_2.52.3-1 libgmp-dev_2:6.1.2+dfsg-1 libgmp10_2:6.1.2+dfsg-1 libgmpxx4ldbl_2:6.1.2+dfsg-1 libgnutls30_3.5.13-2 libgomp1_7.1.0-9 libgpg-error0_1.27-3 libgraphite2-3_1.3.10-2 libgssapi-krb5-2_1.15-1 libgtk2.0-0_2.24.31-2 libgtk2.0-common_2.24.31-2 libharfbuzz0b_1.4.2-1 libhogweed4_3.3-1+b1 libice6_2:1.0.9-2 libicu57_57.1-6 libidn2-0_0.16-1+b1 libisl15_0.18-1 libitm1_7.1.0-9 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:1.5.1-2 libjs-jquery_3.1.1-2 libjs-jquery-ui_1.12.1+dfsg-4 libjs-sphinxdoc_1.4.9-2 libjs-underscore_1.8.3~dfsg-1 libjsoncpp1_1.7.4-3 libk5crypto3_1.15-1 libkeyutils1_1.5.9-9 libkrb5-3_1.15-1 libkrb5support0_1.15-1 liblapack3_3.7.1-1 libllvm3.9_1:3.9.1-10 liblsan0_7.1.0-9 liblz4-1_0.0~r131-2+b1 liblzma5_5.2.2-1.2+b1 libmagic-mgc_1:5.30-1 libmagic1_1:5.30-1 libmarkdown2_2.2.2-1 libmount1_2.29.2-1 libmpc3_1.0.3-1+b2 libmpdec2_2.4.2-1 libmpfr4_3.1.5-1 libmpx2_7.1.0-9 libncurses5_6.0+20161126-1 libncurses5-dev_6.0+20161126-1 libncursesw5_6.0+20161126-1 libnettle6_3.3-1+b1 libobjc-6-dev_6.4.0-1 libobjc4_7.1.0-9 libp11-kit0_0.23.7-2 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpango-1.0-0_1.40.6-1 libpangocairo-1.0-0_1.40.6-1 libpangoft2-1.0-0_1.40.6-1 libpcre3_2:8.39-3 libperl5.24_5.24.1-6 libpipeline1_1.4.1-2 libpixman-1-0_0.34.0-1 libpng16-16_1.6.29-3 libpython-all-dev_2.7.13-2 libpython-dev_2.7.13-2 libpython-stdlib_2.7.13-2 libpython2.7_2.7.13-2 libpython2.7-dev_2.7.13-2 libpython2.7-minimal_2.7.13-2 libpython2.7-stdlib_2.7.13-2 libpython3-stdlib_3.5.3-3 libpython3.5-minimal_3.5.3-3 libpython3.5-stdlib_3.5.3-3 libquadmath0_7.1.0-9 libreadline7_7.0-3 librsvg2-2_2.40.16-1+b1 librsvg2-common_2.40.16-1+b1 libruby2.3_2.3.3-1 libselinux1_2.6-3+b2 libsemanage-common_2.6-2 libsemanage1_2.6-2+b1 libsepol1_2.6-2 libsigsegv2_2.11-1 libsm6_2:1.2.2-1+b3 libsmartcols1_2.29.2-1 libsqlite3-0_3.16.2-5 libss2_1.43.4-2 libssl1.0.2_1.0.2l-2 libssl1.1_1.1.0f-3 libstdc++-6-dev_6.4.0-1 libstdc++6_7.1.0-9 libsystemd0_233-10 libtasn1-6_4.12-2 libthai-data_0.1.26-1 libthai0_0.1.26-1 libtiff5_4.0.8-3 libtimedate-perl_2.3000-2 libtinfo-dev_6.0+20161126-1 libtinfo5_6.0+20161126-1 libtool_2.4.6-2 libtsan0_7.1.0-9 libubsan0_7.1.0-9 libudev1_233-10 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-1 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.12-1 libxcb-shm0_1.12-1 libxcb1_1.12-1 libxcomposite1_1:0.4.4-2 libxcursor1_1:1.1.14-1+b4 libxdamage1_1:1.1.4-2+b3 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxi6_2:1.7.9-1 libxinerama1_2:1.1.3-1+b3 libxml2_2.9.4+dfsg1-3 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrandr2_2:1.5.1-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libyaml-0-2_0.1.7-2 linux-libc-dev_4.11.6-1 login_1:4.4-4.1 lsb-base_9.20161125 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17+b3 mime-support_3.60 mount_2.29.2-1 multiarch-support_2.24-12 ncurses-base_6.0+20161126-1 ncurses-bin_6.0+20161126-1 openssl_1.1.0f-3 passwd_1:4.4-4.1 patch_2.7.5-1+b2 perl_5.24.1-6 perl-base_5.24.1-6 perl-modules-5.24_5.24.1-6 po-debconf_1.0.20 python_2.7.13-2 python-alabaster_0.7.8-1 python-all_2.7.13-2 python-all-dev_2.7.13-2 python-babel_2.4.0+dfsg.1-2 python-babel-localedata_2.4.0+dfsg.1-2 python-cogent_1.9-11 python-cycler_0.10.0-1 python-dateutil_2.5.3-2 python-dev_2.7.13-2 python-docutils_0.13.1+dfsg-2 python-functools32_3.2.3.2-3 python-imagesize_0.7.1-1 python-jinja2_2.9.6-1 python-markupsafe_1.0-1+b1 python-matplotlib_2.0.0+dfsg1-2+b1 python-matplotlib-data_2.0.0+dfsg1-2 python-minimal_2.7.13-2 python-numpy_1:1.12.1-3+b2 python-pkg-resources_36.0.1-1 python-pygments_2.2.0+dfsg-1 python-pyparsing_2.1.10+dfsg1-1 python-qcli_0.1.1-1 python-roman_2.0.0-2 python-setuptools_36.0.1-1 python-six_1.10.0-4 python-sphinx_1.4.9-2 python-subprocess32_3.2.7-2 python-tz_2017.2-2 python2.7_2.7.13-2 python2.7-dev_2.7.13-2 python2.7-minimal_2.7.13-2 python3_3.5.3-3 python3-minimal_3.5.3-3 python3.5_3.5.3-3 python3.5-minimal_3.5.3-3 rake_12.0.0-1 readline-common_7.0-3 ruby_1:2.3.3 ruby-did-you-mean_1.0.0-2 ruby-fast-xs_0.8.0-3+b8 ruby-hpricot_0.8.6-6+b2 ruby-minitest_5.10.2-1 ruby-mustache_1.0.2-1 ruby-net-telnet_0.1.1-2 ruby-power-assert_0.3.0-1 ruby-rdiscount_2.1.8-1+b3 ruby-ronn_0.7.3-5 ruby-test-unit_3.2.5-1 ruby2.3_2.3.3-1 rubygems-integration_1.11 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-qiime-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9 sgml-base_1.29 shared-mime-info_1.8-1 sphinx-common_1.4.9-2 sysvinit-utils_2.88dsf-59.9 tar_1.29b-1.1 ttf-bitstream-vera_1.10-8 tzdata_2017b-2 ucf_3.0036 util-linux_2.29.2-1 x11-common_1:7.7+19 xml-core_0.17 xz-utils_5.2.2-1.2+b1 zlib1g_1:1.2.8.dfsg-5 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Nov 25 17:44:16 2015 UTC gpgv: using RSA key 578A0494D1C646D1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./qiime_1.9.1+dfsg-1.dsc dpkg-source: info: extracting qiime in /<>/qiime-1.9.1+dfsg dpkg-source: info: unpacking qiime_1.9.1+dfsg.orig.tar.xz dpkg-source: info: unpacking qiime_1.9.1+dfsg-1.debian.tar.xz dpkg-source: info: applying allow_empty_default_taxonomy.patch dpkg-source: info: applying check_config_file_in_new_location.patch dpkg-source: info: applying make_qiime_accept_new_rdp_classifier.patch dpkg-source: info: applying fix_path_for_support_files.patch dpkg-source: info: applying relax_mothur_blast_raxml_versions.patch dpkg-source: info: applying prevent_google_addsense.patch dpkg-source: info: applying fix_script_usage_tests.patch dpkg-source: info: applying prevent_download_on_builds.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-60177906-0624-4fde-a234-da04a5388ced SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package qiime dpkg-buildpackage: info: source version 1.9.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build qiime-1.9.1+dfsg dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python2 dh_testdir debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/qiime-1.9.1+dfsg' #Calling "python setup.py clean -a" actually triggers a #rebuild, so don't do it. rm -f *.logfile rm -rf build rm -rf doc/_build rm -f debian/*.1 ( cd qiime/support_files/denoiser/FlowgramAlignment && make clean ) || true make[2]: Entering directory '/<>/qiime-1.9.1+dfsg/qiime/support_files/denoiser/FlowgramAlignment' rm -f *.o rm -f *.hi rm -f FlowgramAli_4frame rm -f ../../../../scripts/FlowgramAli_4frame make[2]: Leaving directory '/<>/qiime-1.9.1+dfsg/qiime/support_files/denoiser/FlowgramAlignment' rm -f qiime/support_files/denoiser/bin/* #In case the tarball was not re-packed, remove any .jars find -name '*.jar' -delete #And in case any Python script was run, remove the .pyc find qiime scripts -name '*.pyc' -delete # Remove remainings from running the test suite rm -f BLAST_temp_db* rm -rf jobs tests/jobs rm -rf qiime.egg-info make[1]: Leaving directory '/<>/qiime-1.9.1+dfsg' dh_clean debian/rules build-arch dh build-arch --with python2 dh_testdir -a dh_update_autotools_config -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>/qiime-1.9.1+dfsg' cd qiime/support_files/denoiser/FlowgramAlignment && make make[2]: Entering directory '/<>/qiime-1.9.1+dfsg/qiime/support_files/denoiser/FlowgramAlignment' ghc --make -O2 FlowgramAli_4frame [1 of 3] Compiling FlowgramUtils ( FlowgramUtils.lhs, FlowgramUtils.o ) [2 of 3] Compiling ADPCombinators ( ADPCombinators.lhs, ADPCombinators.o ) [3 of 3] Compiling Main ( FlowgramAli_4frame.lhs, FlowgramAli_4frame.o ) Linking FlowgramAli_4frame ... In file included from /tmp/ghc54ba_0/ghc_13.c:1:0: error: In file included from /usr/lib/ghc/include/Rts.h:217:0: error: /usr/lib/ghc/include/rts/storage/ClosureMacros.h:505:5: error: warning: macro expansion producing 'defined' has undefined behavior [-Wexpansion-to-defined] #if ZERO_SLOP_FOR_LDV_PROF || ZERO_SLOP_FOR_SANITY_CHECK ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:502:37: error: note: expanded from macro 'ZERO_SLOP_FOR_LDV_PROF' #define ZERO_SLOP_FOR_LDV_PROF (defined(PROFILING)) ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:505:31: error: warning: macro expansion producing 'defined' has undefined behavior [-Wexpansion-to-defined] #if ZERO_SLOP_FOR_LDV_PROF || ZERO_SLOP_FOR_SANITY_CHECK ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:503:37: error: note: expanded from macro 'ZERO_SLOP_FOR_SANITY_CHECK' #define ZERO_SLOP_FOR_SANITY_CHECK (defined(DEBUG) && !defined(THREADED_RTS)) ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:505:31: error: warning: macro expansion producing 'defined' has undefined behavior [-Wexpansion-to-defined] /usr/lib/ghc/include/rts/storage/ClosureMacros.h:503:56: error: note: expanded from macro 'ZERO_SLOP_FOR_SANITY_CHECK' #define ZERO_SLOP_FOR_SANITY_CHECK (defined(DEBUG) && !defined(THREADED_RTS)) ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:523:5: error: warning: macro expansion producing 'defined' has undefined behavior [-Wexpansion-to-defined] #if ZERO_SLOP_FOR_LDV_PROF && !ZERO_SLOP_FOR_SANITY_CHECK ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:502:37: error: note: expanded from macro 'ZERO_SLOP_FOR_LDV_PROF' #define ZERO_SLOP_FOR_LDV_PROF (defined(PROFILING)) ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:523:32: error: warning: macro expansion producing 'defined' has undefined behavior [-Wexpansion-to-defined] #if ZERO_SLOP_FOR_LDV_PROF && !ZERO_SLOP_FOR_SANITY_CHECK ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:503:37: error: note: expanded from macro 'ZERO_SLOP_FOR_SANITY_CHECK' #define ZERO_SLOP_FOR_SANITY_CHECK (defined(DEBUG) && !defined(THREADED_RTS)) ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:523:32: error: warning: macro expansion producing 'defined' has undefined behavior [-Wexpansion-to-defined] /usr/lib/ghc/include/rts/storage/ClosureMacros.h:503:56: error: note: expanded from macro 'ZERO_SLOP_FOR_SANITY_CHECK' #define ZERO_SLOP_FOR_SANITY_CHECK (defined(DEBUG) && !defined(THREADED_RTS)) ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:552:5: error: warning: macro expansion producing 'defined' has undefined behavior [-Wexpansion-to-defined] #if ZERO_SLOP_FOR_LDV_PROF && !ZERO_SLOP_FOR_SANITY_CHECK ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:502:37: error: note: expanded from macro 'ZERO_SLOP_FOR_LDV_PROF' #define ZERO_SLOP_FOR_LDV_PROF (defined(PROFILING)) ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:552:32: error: warning: macro expansion producing 'defined' has undefined behavior [-Wexpansion-to-defined] #if ZERO_SLOP_FOR_LDV_PROF && !ZERO_SLOP_FOR_SANITY_CHECK ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:503:37: error: note: expanded from macro 'ZERO_SLOP_FOR_SANITY_CHECK' #define ZERO_SLOP_FOR_SANITY_CHECK (defined(DEBUG) && !defined(THREADED_RTS)) ^ /usr/lib/ghc/include/rts/storage/ClosureMacros.h:552:32: error: warning: macro expansion producing 'defined' has undefined behavior [-Wexpansion-to-defined] /usr/lib/ghc/include/rts/storage/ClosureMacros.h:503:56: error: note: expanded from macro 'ZERO_SLOP_FOR_SANITY_CHECK' #define ZERO_SLOP_FOR_SANITY_CHECK (defined(DEBUG) && !defined(THREADED_RTS)) ^ 9 warnings generated. clang: error: unknown argument: '-no-pie' `gcc' failed in phase `Linker'. (Exit code: 1) Makefile:6: recipe for target 'FlowgramAli_4frame' failed make[2]: *** [FlowgramAli_4frame] Error 1 make[2]: Leaving directory '/<>/qiime-1.9.1+dfsg/qiime/support_files/denoiser/FlowgramAlignment' debian/rules:24: recipe for target 'override_dh_auto_build' failed make[1]: *** [override_dh_auto_build] Error 2 make[1]: Leaving directory '/<>/qiime-1.9.1+dfsg' debian/rules:13: recipe for target 'build-arch' failed make: *** [build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 2017-07-06T19:53:30Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 115868 Build-Time: 5 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 37 Job: qiime_1.9.1+dfsg-1 Machine Architecture: amd64 Package: qiime Package-Time: 63 Source-Version: 1.9.1+dfsg-1 Space: 115868 Status: attempted Version: 1.9.1+dfsg-1 -------------------------------------------------------------------------------- Finished at 2017-07-06T19:53:30Z Build needed 00:01:03, 115868k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 64.129780846s DC-Time-Estimation: 64.129780846 versus expected 402 (r/m: 5.268538496417989 ; m: 64.129780846)