DC-Build-Header: librostlab-blast 1.0.1-8 / 2017-07-06 18:09:05 +0000 DC-Task: type:rebuild-binarch-only source:librostlab-blast version:1.0.1-8 chroot:unstable esttime:786 logfile:/tmp/librostlab-blast_1.0.1-8_unstable_clang4.0.log modes:clang40:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang40 librostlab-blast_1.0.1-8' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-38-111.eu-central-1.compute.internal +==============================================================================+ | librostlab-blast 1.0.1-8 (amd64) Thu, 06 Jul 2017 18:09:05 +0000 | +==============================================================================+ Package: librostlab-blast Version: 1.0.1-8 Source Version: 1.0.1-8 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-125ebd64-32a6-49d5-bbe3-41008694b8a6' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang40 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=4.0 + echo 'Install of clang-4.0' Install of clang-4.0 + apt-get update Hit:1 http://127.0.0.1:9999/debian unstable InRelease Get:2 http://127.0.0.1:9999/debian unstable/main Translation-en [5730 kB] Fetched 5730 kB in 1s (3964 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-4.0 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libbsd0 libclang-common-4.0-dev libclang1-4.0 libedit2 libjsoncpp1 libllvm4.0 libncurses5 libobjc-6-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-4.0-doc libomp-dev Recommended packages: llvm-4.0-dev python libgpm2 The following NEW packages will be installed: clang-4.0 libbsd0 libclang-common-4.0-dev libclang1-4.0 libedit2 libjsoncpp1 libllvm4.0 libncurses5 libobjc-6-dev libobjc4 0 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. Need to get 74.4 MB of archives. After this operation, 320 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.5-1 [89.6 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5 amd64 6.0+20161126-1 [93.4 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20170329-1 [85.2 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libllvm4.0 amd64 1:4.0.1-1 [12.3 MB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-4.0 amd64 1:4.0.1-1 [6355 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 7.1.0-9 [51.0 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-6-dev amd64 6.4.0-1 [197 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-4.0-dev amd64 1:4.0.1-1 [2495 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 clang-4.0 amd64 1:4.0.1-1 [52.7 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 74.4 MB in 0s (96.5 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9711 files and directories currently installed.) Preparing to unpack .../0-libbsd0_0.8.5-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.5-1) ... Selecting previously unselected package libncurses5:amd64. Preparing to unpack .../1-libncurses5_6.0+20161126-1_amd64.deb ... Unpacking libncurses5:amd64 (6.0+20161126-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../2-libedit2_3.1-20170329-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20170329-1) ... Selecting previously unselected package libllvm4.0:amd64. Preparing to unpack .../3-libllvm4.0_1%3a4.0.1-1_amd64.deb ... Unpacking libllvm4.0:amd64 (1:4.0.1-1) ... Selecting previously unselected package libclang1-4.0:amd64. Preparing to unpack .../4-libclang1-4.0_1%3a4.0.1-1_amd64.deb ... Unpacking libclang1-4.0:amd64 (1:4.0.1-1) ... Selecting previously unselected package libjsoncpp1:amd64. Preparing to unpack .../5-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../6-libobjc4_7.1.0-9_amd64.deb ... Unpacking libobjc4:amd64 (7.1.0-9) ... Selecting previously unselected package libobjc-6-dev:amd64. Preparing to unpack .../7-libobjc-6-dev_6.4.0-1_amd64.deb ... Unpacking libobjc-6-dev:amd64 (6.4.0-1) ... Selecting previously unselected package libclang-common-4.0-dev. Preparing to unpack .../8-libclang-common-4.0-dev_1%3a4.0.1-1_amd64.deb ... Unpacking libclang-common-4.0-dev (1:4.0.1-1) ... Selecting previously unselected package clang-4.0. Preparing to unpack .../9-clang-4.0_1%3a4.0.1-1_amd64.deb ... Unpacking clang-4.0 (1:4.0.1-1) ... Setting up libncurses5:amd64 (6.0+20161126-1) ... Setting up libobjc4:amd64 (7.1.0-9) ... Setting up libbsd0:amd64 (0.8.5-1) ... Processing triggers for libc-bin (2.24-12) ... Setting up libobjc-6-dev:amd64 (6.4.0-1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libllvm4.0:amd64 (1:4.0.1-1) ... Setting up libclang1-4.0:amd64 (1:4.0.1-1) ... Setting up libclang-common-4.0-dev (1:4.0.1-1) ... Setting up clang-4.0 (1:4.0.1-1) ... Processing triggers for libc-bin (2.24-12) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-4.0 g++-4.6 + ln -s clang-4.0 gcc-4.6 + ln -s clang-4.0 cpp-4.6 + ln -s clang-4.0 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-4.0 g++-4.7 + ln -s clang-4.0 gcc-4.7 + ln -s clang-4.0 cpp-4.7 + ln -s clang-4.0 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-4.0 g++-4.8 + ln -s clang-4.0 gcc-4.8 + ln -s clang-4.0 cpp-4.8 + ln -s clang-4.0 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-4.0 g++-4.9 + ln -s clang-4.0 gcc-4.9 + ln -s clang-4.0 cpp-4.9 + ln -s clang-4.0 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-4.0 g++-5 + ln -s clang-4.0 gcc-5 + ln -s clang-4.0 cpp-5 + ln -s clang-4.0 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-4.0 g++-6 + ln -s clang-4.0 gcc-6 + ln -s clang-4.0 cpp-6 + ln -s clang-4.0 gcc + echo 'gcc-6 hold' + dpkg --set-selections + echo 'g++-6 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-4.0 g++-7 + ln -s clang-4.0 gcc-7 + ln -s clang-4.0 cpp-7 + ln -s clang-4.0 gcc + echo 'gcc-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + cd - /build/librostlab-blast-RA4arE + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang40'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'librostlab-blast' packaging is maintained in the 'Git' version control system at: https://anonscm.debian.org/git/debian-med/librostlab-blast.git Please use: git clone https://anonscm.debian.org/git/debian-med/librostlab-blast.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 392 kB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main librostlab-blast 1.0.1-8 (dsc) [2420 B] Get:2 http://127.0.0.1:9999/debian unstable/main librostlab-blast 1.0.1-8 (tar) [384 kB] Get:3 http://127.0.0.1:9999/debian unstable/main librostlab-blast 1.0.1-8 (diff) [5332 B] Fetched 392 kB in 0s (33.9 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/librostlab-blast-RA4arE/librostlab-blast-1.0.1' with '<>' I: NOTICE: Log filtering will replace 'build/librostlab-blast-RA4arE' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-xADAse/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-xADAse/apt_archive ./ InRelease Get:2 copy:/<>/resolver-xADAse/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-xADAse/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-xADAse/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-xADAse/apt_archive ./ Packages [433 B] Fetched 1739 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 782 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-xADAse/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [782 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 782 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10206 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 10), dh-autoreconf, d-shlibs, bison, doxygen, flex, graphviz, texlive-latex-recommended, librostlab-dev, texlive-fonts-recommended, texlive-latex-extra Filtered Build-Depends: debhelper (>= 10), dh-autoreconf, d-shlibs, bison, doxygen, flex, graphviz, texlive-latex-recommended, librostlab-dev, texlive-fonts-recommended, texlive-latex-extra dpkg-deb: building package 'sbuild-build-depends-librostlab-blast-dummy' in '/<>/resolver-xADAse/apt_archive/sbuild-build-depends-librostlab-blast-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-librostlab-blast-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-xADAse/apt_archive ./ InRelease Get:2 copy:/<>/resolver-xADAse/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-xADAse/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-xADAse/apt_archive ./ Sources [572 B] Get:5 copy:/<>/resolver-xADAse/apt_archive ./ Packages [655 B] Fetched 2190 B in 0s (0 B/s) Reading package lists... Reading package lists... Install librostlab-blast build dependencies (apt-based resolver) ---------------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen file flex fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base graphviz groff-base intltool-debian libann0 libarchive-zip-perl libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libcairo2 libcdt5 libcgraph6 libclang1-3.9 libcroco3 libcups2 libcupsimage2 libdatrie1 libdbus-1-3 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd3 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz-icu0 libharfbuzz0b libice6 libicu57 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2 libllvm3.9 libltdl7 libmagic-mgc libmagic1 libnspr4 libnss3 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libpoppler64 libpotrace0 libptexenc1 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libreadline7 librostlab3 librostlab3-dev libsigsegv2 libsm6 libsqlite3-0 libssl1.1 libsynctex1 libtexlua52 libtexluajit2 libthai-data libthai0 libtiff5 libtimedate-perl libtool libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxdot4 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libzzip-0-13 lsb-base m4 man-db mime-support po-debconf poppler-data preview-latex-style python python-minimal python2.7 python2.7-minimal readline-common t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff cups-common libgd-tools krb5-doc krb5-user liblcms2-utils librostlab-doc libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc less www-browser libmail-box-perl poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum python-doc python-tk python2.7-doc binfmt-support readline-doc gv | postscript-viewer perl-tk xpdf-reader | pdf-viewer python-pygments libfile-which-perl libspreadsheet-parseexcel-perl texlive-pstricks dot2tex prerex ruby-tcltk | libtcltk-ruby gvfs-bin Recommended packages: libfl-dev curl | wget | lynx-cur fonts-liberation libcupsfilters1 dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback libgts-bin krb5-locales libltdl-dev xml-core libmail-sendmail-perl lmodern ruby wish tex-gyre texlive-fonts-recommended-doc tipa texlive-latex-base-doc texlive-latex-extra-doc texlive-plain-generic prosper texlive-latex-recommended-doc ruby | ruby-interpreter texlive-pictures-doc tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen file flex fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base graphviz groff-base intltool-debian libann0 libarchive-zip-perl libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libcairo2 libcdt5 libcgraph6 libclang1-3.9 libcroco3 libcups2 libcupsimage2 libdatrie1 libdbus-1-3 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd3 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz-icu0 libharfbuzz0b libice6 libicu57 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2 libllvm3.9 libltdl7 libmagic-mgc libmagic1 libnspr4 libnss3 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libpoppler64 libpotrace0 libptexenc1 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libreadline7 librostlab3 librostlab3-dev libsigsegv2 libsm6 libsqlite3-0 libssl1.1 libsynctex1 libtexlua52 libtexluajit2 libthai-data libthai0 libtiff5 libtimedate-perl libtool libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxdot4 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libzzip-0-13 lsb-base m4 man-db mime-support po-debconf poppler-data preview-latex-style python python-minimal python2.7 python2.7-minimal readline-common sbuild-build-depends-librostlab-blast-dummy t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils 0 upgraded, 146 newly installed, 0 to remove and 0 not upgraded. Need to get 143 MB of archives. After this operation, 492 MB of additional disk space will be used. Get:1 copy:/<>/resolver-xADAse/apt_archive ./ sbuild-build-depends-librostlab-blast-dummy 0.invalid.0 [866 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-9 [1160 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 9.0.12+nmu1 [186 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.4.1-2 [27.6 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.7.6.1-2 [1044 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-minimal amd64 2.7.13-2 [389 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-minimal amd64 2.7.13-2 [1383 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 python-minimal amd64 2.7.13-2 [40.5 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 mime-support all 3.60 [36.7 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.1-3 [85.6 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 7.0-3 [70.4 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libreadline7 amd64 7.0-3 [151 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.16.2-5 [572 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.1 amd64 1.1.0f-3 [1342 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-stdlib amd64 2.7.13-2 [1895 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 python2.7 amd64 2.7.13-2 [285 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 libpython-stdlib amd64 2.7.13-2 [20.0 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 python amd64 2.7.13-2 [154 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.11-1 [29.9 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 flex amd64 2.6.1-1.3 [440 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 libpng16-16 amd64 1.6.29-3 [281 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 libfreetype6 amd64 2.8-0.2 [449 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 ucf all 3.0036 [70.2 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig-config all 2.12.3-0.1 [303 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 libfontconfig1 amd64 2.12.3-0.1 [366 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig amd64 2.12.3-0.1 [436 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1 [20.7 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 poppler-data all 0.4.7-8 [1451 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 tex-common all 6.07 [566 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 lsb-base all 9.20161125 [27.9 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 libxapian30 amd64 1.4.4-2 [1068 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.30-1 [222 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.30-1 [111 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.30-1 [63.9 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-2+b1 [122 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 libkeyutils1 amd64 1.5.9-9 [12.4 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5support0 amd64 1.15-1 [61.7 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 libk5crypto3 amd64 1.15-1 [119 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5-3 amd64 1.15-1 [311 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.15-1 [154 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 libidn11 amd64 1.33-1 [115 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-6 [7701 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-3 [715 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-10 [338 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20161112.1 [73.4 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-2 [736 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-2 [433 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 libbison-dev amd64 2:3.0.4.dfsg-1+b1 [433 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 bison amd64 2:3.0.4.dfsg-1+b1 [786 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 d-shlibs all 0.80 [18.6 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2 [545 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 14 [15.9 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.59-1 [95.5 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.035-2 [17.0 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.035-2 [10.7 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.52.3-1 [2742 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-1 [144 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-2+b1 [1301 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 10.6.2 [968 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 libllvm3.9 amd64 1:3.9.1-10 [11.3 MB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-3.9 amd64 1:3.9.1-10 [5875 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 doxygen amd64 1.8.13-7 [3966 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 fonts-lmodern all 2.004.5-3 [4540 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 libann0 amd64 1.1.2+doc-6 [24.9 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 libcdt5 amd64 2.38.0-17 [59.6 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 libcgraph6 amd64 2.38.0-17 [82.2 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.1-2 [134 kB] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5 amd64 4.0.8-3 [237 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 libwebp6 amd64 0.5.2-1 [235 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 libxcb1 amd64 1.12-1 [133 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 libx11-data all 2:1.6.4-3 [290 kB] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 libx11-6 amd64 2:1.6.4-3 [747 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 libgd3 amd64 2.2.4-2 [132 kB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-4 [158 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 libpixman-1-0 amd64 0.34.0-1 [530 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-render0 amd64 1.12-1 [105 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-shm0 amd64 1.12-1 [95.9 kB] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libcairo2 amd64 1.14.10-1 [774 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 libltdl7 amd64 2.4.6-2 [389 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libthai-data all 0.1.26-1 [166 kB] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 libdatrie1 amd64 0.2.10-4+b1 [36.4 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 libthai0 amd64 0.1.26-1 [52.1 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 libpango-1.0-0 amd64 1.40.6-1 [182 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 libgraphite2-3 amd64 1.3.10-2 [84.3 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 libharfbuzz0b amd64 1.4.2-1 [671 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.40.6-1 [67.0 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.40.6-1 [54.8 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 libpathplan4 amd64 2.38.0-17 [62.8 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 libxdot4 amd64 2.38.0-17 [55.6 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 libgvc6 amd64 2.38.0-17 [639 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 libgvpr2 amd64 2.38.0-17 [211 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 x11-common all 1:7.7+19 [251 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 libsm6 amd64 2:1.2.2-1+b3 [33.3 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 libxt6 amd64 1:1.1.5-1 [188 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 libxmu6 amd64 2:1.1.2-2 [60.3 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 graphviz amd64 2.38.0-17 [802 kB] Get:109 http://127.0.0.1:9999/debian unstable/main amd64 libavahi-common-data amd64 0.6.32-2 [118 kB] Get:110 http://127.0.0.1:9999/debian unstable/main amd64 libavahi-common3 amd64 0.6.32-2 [52.0 kB] Get:111 http://127.0.0.1:9999/debian unstable/main amd64 libdbus-1-3 amd64 1.10.20-1 [193 kB] Get:112 http://127.0.0.1:9999/debian unstable/main amd64 libavahi-client3 amd64 0.6.32-2 [55.3 kB] Get:113 http://127.0.0.1:9999/debian unstable/main amd64 libcups2 amd64 2.2.4-1 [313 kB] Get:114 http://127.0.0.1:9999/debian unstable/main amd64 libcupsimage2 amd64 2.2.4-1 [125 kB] Get:115 http://127.0.0.1:9999/debian unstable/main amd64 libijs-0.35 amd64 0.35-12 [18.4 kB] Get:116 http://127.0.0.1:9999/debian unstable/main amd64 libjbig2dec0 amd64 0.13-4.1 [60.1 kB] Get:117 http://127.0.0.1:9999/debian unstable/main amd64 liblcms2-2 amd64 2.8-4 [143 kB] Get:118 http://127.0.0.1:9999/debian unstable/main amd64 libopenjp2-7 amd64 2.1.2-1.1 [121 kB] Get:119 http://127.0.0.1:9999/debian unstable/main amd64 libpaper1 amd64 1.1.24+nmu5 [21.6 kB] Get:120 http://127.0.0.1:9999/debian unstable/main amd64 libgs9-common all 9.21~dfsg-1 [5164 kB] Get:121 http://127.0.0.1:9999/debian unstable/main amd64 libgs9 amd64 9.21~dfsg-1 [2142 kB] Get:122 http://127.0.0.1:9999/debian unstable/main amd64 libharfbuzz-icu0 amd64 1.4.2-1 [466 kB] Get:123 http://127.0.0.1:9999/debian unstable/main amd64 libkpathsea6 amd64 2017.20170613.44572-2 [161 kB] Get:124 http://127.0.0.1:9999/debian unstable/main amd64 libnspr4 amd64 2:4.15-1 [117 kB] Get:125 http://127.0.0.1:9999/debian unstable/main amd64 libnss3 amd64 2:3.31-1 [1160 kB] Get:126 http://127.0.0.1:9999/debian unstable/main amd64 libpaper-utils amd64 1.1.24+nmu5 [17.6 kB] Get:127 http://127.0.0.1:9999/debian unstable/main amd64 libpoppler64 amd64 0.48.0-2 [1285 kB] Get:128 http://127.0.0.1:9999/debian unstable/main amd64 libpotrace0 amd64 1.14-2 [25.7 kB] Get:129 http://127.0.0.1:9999/debian unstable/main amd64 libptexenc1 amd64 2017.20170613.44572-2 [58.1 kB] Get:130 http://127.0.0.1:9999/debian unstable/main amd64 librostlab3 amd64 1.0.20-7 [6008 B] Get:131 http://127.0.0.1:9999/debian unstable/main amd64 librostlab3-dev amd64 1.0.20-7 [13.9 kB] Get:132 http://127.0.0.1:9999/debian unstable/main amd64 libsynctex1 amd64 2017.20170613.44572-2 [65.1 kB] Get:133 http://127.0.0.1:9999/debian unstable/main amd64 libtexlua52 amd64 2017.20170613.44572-2 [111 kB] Get:134 http://127.0.0.1:9999/debian unstable/main amd64 libtexluajit2 amd64 2017.20170613.44572-2 [250 kB] Get:135 http://127.0.0.1:9999/debian unstable/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB] Get:136 http://127.0.0.1:9999/debian unstable/main amd64 libzzip-0-13 amd64 0.13.62-3.1 [55.4 kB] Get:137 http://127.0.0.1:9999/debian unstable/main amd64 preview-latex-style all 11.90-1 [200 kB] Get:138 http://127.0.0.1:9999/debian unstable/main amd64 t1utils amd64 1.39-2 [59.0 kB] Get:139 http://127.0.0.1:9999/debian unstable/main amd64 texlive-binaries amd64 2017.20170613.44572-2 [8082 kB] Get:140 http://127.0.0.1:9999/debian unstable/main amd64 xdg-utils all 1.1.1-1 [71.1 kB] Get:141 http://127.0.0.1:9999/debian unstable/main amd64 texlive-base all 2017.20170629-1 [18.7 MB] Get:142 http://127.0.0.1:9999/debian unstable/main amd64 texlive-fonts-recommended all 2017.20170629-1 [5310 kB] Get:143 http://127.0.0.1:9999/debian unstable/main amd64 texlive-latex-base all 2017.20170629-1 [975 kB] Get:144 http://127.0.0.1:9999/debian unstable/main amd64 texlive-latex-recommended all 2017.20170629-1 [14.8 MB] Get:145 http://127.0.0.1:9999/debian unstable/main amd64 texlive-pictures all 2017.20170629-1 [3981 kB] Get:146 http://127.0.0.1:9999/debian unstable/main amd64 texlive-latex-extra all 2017.20170629-1 [10.3 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 143 MB in 1s (98.5 MB/s) Selecting previously unselected package groff-base. (Reading database ... 10206 files and directories currently installed.) Preparing to unpack .../00-groff-base_1.22.3-9_amd64.deb ... Unpacking groff-base (1.22.3-9) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_9.0.12+nmu1_amd64.deb ... Unpacking bsdmainutils (9.0.12+nmu1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../02-libpipeline1_1.4.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.4.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../03-man-db_2.7.6.1-2_amd64.deb ... Unpacking man-db (2.7.6.1-2) ... Selecting previously unselected package libpython2.7-minimal:amd64. Preparing to unpack .../04-libpython2.7-minimal_2.7.13-2_amd64.deb ... Unpacking libpython2.7-minimal:amd64 (2.7.13-2) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../05-python2.7-minimal_2.7.13-2_amd64.deb ... Unpacking python2.7-minimal (2.7.13-2) ... Selecting previously unselected package python-minimal. Preparing to unpack .../06-python-minimal_2.7.13-2_amd64.deb ... Unpacking python-minimal (2.7.13-2) ... Selecting previously unselected package mime-support. Preparing to unpack .../07-mime-support_3.60_all.deb ... Unpacking mime-support (3.60) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../08-libexpat1_2.2.1-3_amd64.deb ... Unpacking libexpat1:amd64 (2.2.1-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../09-readline-common_7.0-3_all.deb ... Unpacking readline-common (7.0-3) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../10-libreadline7_7.0-3_amd64.deb ... Unpacking libreadline7:amd64 (7.0-3) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../11-libsqlite3-0_3.16.2-5_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.16.2-5) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../12-libssl1.1_1.1.0f-3_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.0f-3) ... Selecting previously unselected package libpython2.7-stdlib:amd64. Preparing to unpack .../13-libpython2.7-stdlib_2.7.13-2_amd64.deb ... Unpacking libpython2.7-stdlib:amd64 (2.7.13-2) ... Selecting previously unselected package python2.7. Preparing to unpack .../14-python2.7_2.7.13-2_amd64.deb ... Unpacking python2.7 (2.7.13-2) ... Selecting previously unselected package libpython-stdlib:amd64. Preparing to unpack .../15-libpython-stdlib_2.7.13-2_amd64.deb ... Unpacking libpython-stdlib:amd64 (2.7.13-2) ... Setting up libpython2.7-minimal:amd64 (2.7.13-2) ... Setting up python2.7-minimal (2.7.13-2) ... Setting up python-minimal (2.7.13-2) ... Selecting previously unselected package python. (Reading database ... 11586 files and directories currently installed.) Preparing to unpack .../000-python_2.7.13-2_amd64.deb ... Unpacking python (2.7.13-2) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../001-libsigsegv2_2.11-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.11-1) ... Selecting previously unselected package m4. Preparing to unpack .../002-m4_1.4.18-1_amd64.deb ... Unpacking m4 (1.4.18-1) ... Selecting previously unselected package flex. Preparing to unpack .../003-flex_2.6.1-1.3_amd64.deb ... Unpacking flex (2.6.1-1.3) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../004-libpng16-16_1.6.29-3_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.29-3) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../005-libfreetype6_2.8-0.2_amd64.deb ... Unpacking libfreetype6:amd64 (2.8-0.2) ... Selecting previously unselected package ucf. Preparing to unpack .../006-ucf_3.0036_all.deb ... Moving old data out of the way Unpacking ucf (3.0036) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../007-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../008-fontconfig-config_2.12.3-0.1_all.deb ... Unpacking fontconfig-config (2.12.3-0.1) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../009-libfontconfig1_2.12.3-0.1_amd64.deb ... Unpacking libfontconfig1:amd64 (2.12.3-0.1) ... Selecting previously unselected package fontconfig. Preparing to unpack .../010-fontconfig_2.12.3-0.1_amd64.deb ... Unpacking fontconfig (2.12.3-0.1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../011-libxau6_1%3a1.0.8-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.8-1) ... Selecting previously unselected package poppler-data. Preparing to unpack .../012-poppler-data_0.4.7-8_all.deb ... Unpacking poppler-data (0.4.7-8) ... Selecting previously unselected package tex-common. Preparing to unpack .../013-tex-common_6.07_all.deb ... Unpacking tex-common (6.07) ... Selecting previously unselected package lsb-base. Preparing to unpack .../014-lsb-base_9.20161125_all.deb ... Unpacking lsb-base (9.20161125) ... Selecting previously unselected package libxapian30:amd64. Preparing to unpack .../015-libxapian30_1.4.4-2_amd64.deb ... Unpacking libxapian30:amd64 (1.4.4-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../016-libmagic-mgc_1%3a5.30-1_amd64.deb ... Unpacking libmagic-mgc (1:5.30-1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../017-libmagic1_1%3a5.30-1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.30-1) ... Selecting previously unselected package file. Preparing to unpack .../018-file_1%3a5.30-1_amd64.deb ... Unpacking file (1:5.30-1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../019-gettext-base_0.19.8.1-2+b1_amd64.deb ... Unpacking gettext-base (0.19.8.1-2+b1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../020-libkeyutils1_1.5.9-9_amd64.deb ... Unpacking libkeyutils1:amd64 (1.5.9-9) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../021-libkrb5support0_1.15-1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.15-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../022-libk5crypto3_1.15-1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.15-1) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../023-libkrb5-3_1.15-1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.15-1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../024-libgssapi-krb5-2_1.15-1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.15-1) ... Selecting previously unselected package libidn11:amd64. Preparing to unpack .../025-libidn11_1.33-1_amd64.deb ... Unpacking libidn11:amd64 (1.33-1) ... Selecting previously unselected package libicu57:amd64. Preparing to unpack .../026-libicu57_57.1-6_amd64.deb ... Unpacking libicu57:amd64 (57.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../027-libxml2_2.9.4+dfsg1-3_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../028-autoconf_2.69-10_all.deb ... Unpacking autoconf (2.69-10) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../029-autotools-dev_20161112.1_all.deb ... Unpacking autotools-dev (20161112.1) ... Selecting previously unselected package automake. Preparing to unpack .../030-automake_1%3a1.15.1-2_all.deb ... Unpacking automake (1:1.15.1-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../031-autopoint_0.19.8.1-2_all.deb ... Unpacking autopoint (0.19.8.1-2) ... Selecting previously unselected package libbison-dev:amd64. Preparing to unpack .../032-libbison-dev_2%3a3.0.4.dfsg-1+b1_amd64.deb ... Unpacking libbison-dev:amd64 (2:3.0.4.dfsg-1+b1) ... Selecting previously unselected package bison. Preparing to unpack .../033-bison_2%3a3.0.4.dfsg-1+b1_amd64.deb ... Unpacking bison (2:3.0.4.dfsg-1+b1) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../034-d-shlibs_0.80_all.deb ... Unpacking d-shlibs (0.80) ... Selecting previously unselected package libtool. Preparing to unpack .../035-libtool_2.4.6-2_all.deb ... Unpacking libtool (2.4.6-2) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../036-dh-autoreconf_14_all.deb ... Unpacking dh-autoreconf (14) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../037-libarchive-zip-perl_1.59-1_all.deb ... Unpacking libarchive-zip-perl (1.59-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../038-libfile-stripnondeterminism-perl_0.035-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (0.035-2) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../039-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../040-dh-strip-nondeterminism_0.035-2_all.deb ... Unpacking dh-strip-nondeterminism (0.035-2) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../041-libglib2.0-0_2.52.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.52.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../042-libcroco3_0.6.12-1_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-1) ... Selecting previously unselected package gettext. Preparing to unpack .../043-gettext_0.19.8.1-2+b1_amd64.deb ... Unpacking gettext (0.19.8.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../044-intltool-debian_0.35.0+20060710.4_all.deb ... Unpacking intltool-debian (0.35.0+20060710.4) ... Selecting previously unselected package po-debconf. Preparing to unpack .../045-po-debconf_1.0.20_all.deb ... Unpacking po-debconf (1.0.20) ... Selecting previously unselected package debhelper. Preparing to unpack .../046-debhelper_10.6.2_all.deb ... Unpacking debhelper (10.6.2) ... Selecting previously unselected package libllvm3.9:amd64. Preparing to unpack .../047-libllvm3.9_1%3a3.9.1-10_amd64.deb ... Unpacking libllvm3.9:amd64 (1:3.9.1-10) ... Selecting previously unselected package libclang1-3.9:amd64. Preparing to unpack .../048-libclang1-3.9_1%3a3.9.1-10_amd64.deb ... Unpacking libclang1-3.9:amd64 (1:3.9.1-10) ... Selecting previously unselected package doxygen. Preparing to unpack .../049-doxygen_1.8.13-7_amd64.deb ... Unpacking doxygen (1.8.13-7) ... Selecting previously unselected package fonts-lmodern. Preparing to unpack .../050-fonts-lmodern_2.004.5-3_all.deb ... Unpacking fonts-lmodern (2.004.5-3) ... Selecting previously unselected package libann0. Preparing to unpack .../051-libann0_1.1.2+doc-6_amd64.deb ... Unpacking libann0 (1.1.2+doc-6) ... Selecting previously unselected package libcdt5. Preparing to unpack .../052-libcdt5_2.38.0-17_amd64.deb ... Unpacking libcdt5 (2.38.0-17) ... Selecting previously unselected package libcgraph6. Preparing to unpack .../053-libcgraph6_2.38.0-17_amd64.deb ... Unpacking libcgraph6 (2.38.0-17) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../054-libjpeg62-turbo_1%3a1.5.1-2_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:1.5.1-2) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../055-libjbig0_2.1-3.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1+b2) ... Selecting previously unselected package libtiff5:amd64. Preparing to unpack .../056-libtiff5_4.0.8-3_amd64.deb ... Unpacking libtiff5:amd64 (4.0.8-3) ... Selecting previously unselected package libwebp6:amd64. Preparing to unpack .../057-libwebp6_0.5.2-1_amd64.deb ... Unpacking libwebp6:amd64 (0.5.2-1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../058-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../059-libxcb1_1.12-1_amd64.deb ... Unpacking libxcb1:amd64 (1.12-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../060-libx11-data_2%3a1.6.4-3_all.deb ... Unpacking libx11-data (2:1.6.4-3) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../061-libx11-6_2%3a1.6.4-3_amd64.deb ... Unpacking libx11-6:amd64 (2:1.6.4-3) ... Selecting previously unselected package libxpm4:amd64. Preparing to unpack .../062-libxpm4_1%3a3.5.12-1_amd64.deb ... Unpacking libxpm4:amd64 (1:3.5.12-1) ... Selecting previously unselected package libgd3:amd64. Preparing to unpack .../063-libgd3_2.2.4-2_amd64.deb ... Unpacking libgd3:amd64 (2.2.4-2) ... Selecting previously unselected package libgts-0.7-5:amd64. Preparing to unpack .../064-libgts-0.7-5_0.7.6+darcs121130-4_amd64.deb ... Unpacking libgts-0.7-5:amd64 (0.7.6+darcs121130-4) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../065-libpixman-1-0_0.34.0-1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.34.0-1) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../066-libxcb-render0_1.12-1_amd64.deb ... Unpacking libxcb-render0:amd64 (1.12-1) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../067-libxcb-shm0_1.12-1_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.12-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../068-libxext6_2%3a1.3.3-1+b2_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.3-1+b2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../069-libxrender1_1%3a0.9.10-1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../070-libcairo2_1.14.10-1_amd64.deb ... Unpacking libcairo2:amd64 (1.14.10-1) ... Selecting previously unselected package libltdl7:amd64. Preparing to unpack .../071-libltdl7_2.4.6-2_amd64.deb ... Unpacking libltdl7:amd64 (2.4.6-2) ... Selecting previously unselected package libthai-data. Preparing to unpack .../072-libthai-data_0.1.26-1_all.deb ... Unpacking libthai-data (0.1.26-1) ... Selecting previously unselected package libdatrie1:amd64. Preparing to unpack .../073-libdatrie1_0.2.10-4+b1_amd64.deb ... Unpacking libdatrie1:amd64 (0.2.10-4+b1) ... Selecting previously unselected package libthai0:amd64. Preparing to unpack .../074-libthai0_0.1.26-1_amd64.deb ... Unpacking libthai0:amd64 (0.1.26-1) ... Selecting previously unselected package libpango-1.0-0:amd64. Preparing to unpack .../075-libpango-1.0-0_1.40.6-1_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.40.6-1) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../076-libgraphite2-3_1.3.10-2_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.10-2) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../077-libharfbuzz0b_1.4.2-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (1.4.2-1) ... Selecting previously unselected package libpangoft2-1.0-0:amd64. Preparing to unpack .../078-libpangoft2-1.0-0_1.40.6-1_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.40.6-1) ... Selecting previously unselected package libpangocairo-1.0-0:amd64. Preparing to unpack .../079-libpangocairo-1.0-0_1.40.6-1_amd64.deb ... Unpacking libpangocairo-1.0-0:amd64 (1.40.6-1) ... Selecting previously unselected package libpathplan4. Preparing to unpack .../080-libpathplan4_2.38.0-17_amd64.deb ... Unpacking libpathplan4 (2.38.0-17) ... Selecting previously unselected package libxdot4. Preparing to unpack .../081-libxdot4_2.38.0-17_amd64.deb ... Unpacking libxdot4 (2.38.0-17) ... Selecting previously unselected package libgvc6. Preparing to unpack .../082-libgvc6_2.38.0-17_amd64.deb ... Unpacking libgvc6 (2.38.0-17) ... Selecting previously unselected package libgvpr2. Preparing to unpack .../083-libgvpr2_2.38.0-17_amd64.deb ... Unpacking libgvpr2 (2.38.0-17) ... Selecting previously unselected package x11-common. Preparing to unpack .../084-x11-common_1%3a7.7+19_all.deb ... Unpacking x11-common (1:7.7+19) ... Selecting previously unselected package libice6:amd64. Preparing to unpack .../085-libice6_2%3a1.0.9-2_amd64.deb ... Unpacking libice6:amd64 (2:1.0.9-2) ... Selecting previously unselected package libsm6:amd64. Preparing to unpack .../086-libsm6_2%3a1.2.2-1+b3_amd64.deb ... Unpacking libsm6:amd64 (2:1.2.2-1+b3) ... Selecting previously unselected package libxt6:amd64. Preparing to unpack .../087-libxt6_1%3a1.1.5-1_amd64.deb ... Unpacking libxt6:amd64 (1:1.1.5-1) ... Selecting previously unselected package libxmu6:amd64. Preparing to unpack .../088-libxmu6_2%3a1.1.2-2_amd64.deb ... Unpacking libxmu6:amd64 (2:1.1.2-2) ... Selecting previously unselected package libxaw7:amd64. Preparing to unpack .../089-libxaw7_2%3a1.0.13-1+b2_amd64.deb ... Unpacking libxaw7:amd64 (2:1.0.13-1+b2) ... Selecting previously unselected package graphviz. Preparing to unpack .../090-graphviz_2.38.0-17_amd64.deb ... Unpacking graphviz (2.38.0-17) ... Selecting previously unselected package libavahi-common-data:amd64. Preparing to unpack .../091-libavahi-common-data_0.6.32-2_amd64.deb ... Unpacking libavahi-common-data:amd64 (0.6.32-2) ... Selecting previously unselected package libavahi-common3:amd64. Preparing to unpack .../092-libavahi-common3_0.6.32-2_amd64.deb ... Unpacking libavahi-common3:amd64 (0.6.32-2) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../093-libdbus-1-3_1.10.20-1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.10.20-1) ... Selecting previously unselected package libavahi-client3:amd64. Preparing to unpack .../094-libavahi-client3_0.6.32-2_amd64.deb ... Unpacking libavahi-client3:amd64 (0.6.32-2) ... Selecting previously unselected package libcups2:amd64. Preparing to unpack .../095-libcups2_2.2.4-1_amd64.deb ... Unpacking libcups2:amd64 (2.2.4-1) ... Selecting previously unselected package libcupsimage2:amd64. Preparing to unpack .../096-libcupsimage2_2.2.4-1_amd64.deb ... Unpacking libcupsimage2:amd64 (2.2.4-1) ... Selecting previously unselected package libijs-0.35:amd64. Preparing to unpack .../097-libijs-0.35_0.35-12_amd64.deb ... Unpacking libijs-0.35:amd64 (0.35-12) ... Selecting previously unselected package libjbig2dec0:amd64. Preparing to unpack .../098-libjbig2dec0_0.13-4.1_amd64.deb ... Unpacking libjbig2dec0:amd64 (0.13-4.1) ... Selecting previously unselected package liblcms2-2:amd64. Preparing to unpack .../099-liblcms2-2_2.8-4_amd64.deb ... Unpacking liblcms2-2:amd64 (2.8-4) ... Selecting previously unselected package libopenjp2-7:amd64. Preparing to unpack .../100-libopenjp2-7_2.1.2-1.1_amd64.deb ... Unpacking libopenjp2-7:amd64 (2.1.2-1.1) ... Selecting previously unselected package libpaper1:amd64. Preparing to unpack .../101-libpaper1_1.1.24+nmu5_amd64.deb ... Unpacking libpaper1:amd64 (1.1.24+nmu5) ... Selecting previously unselected package libgs9-common. Preparing to unpack .../102-libgs9-common_9.21~dfsg-1_all.deb ... Unpacking libgs9-common (9.21~dfsg-1) ... Selecting previously unselected package libgs9:amd64. Preparing to unpack .../103-libgs9_9.21~dfsg-1_amd64.deb ... Unpacking libgs9:amd64 (9.21~dfsg-1) ... Selecting previously unselected package libharfbuzz-icu0:amd64. Preparing to unpack .../104-libharfbuzz-icu0_1.4.2-1_amd64.deb ... Unpacking libharfbuzz-icu0:amd64 (1.4.2-1) ... Selecting previously unselected package libkpathsea6:amd64. Preparing to unpack .../105-libkpathsea6_2017.20170613.44572-2_amd64.deb ... Unpacking libkpathsea6:amd64 (2017.20170613.44572-2) ... Selecting previously unselected package libnspr4:amd64. Preparing to unpack .../106-libnspr4_2%3a4.15-1_amd64.deb ... Unpacking libnspr4:amd64 (2:4.15-1) ... Selecting previously unselected package libnss3:amd64. Preparing to unpack .../107-libnss3_2%3a3.31-1_amd64.deb ... Unpacking libnss3:amd64 (2:3.31-1) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../108-libpaper-utils_1.1.24+nmu5_amd64.deb ... Unpacking libpaper-utils (1.1.24+nmu5) ... Selecting previously unselected package libpoppler64:amd64. Preparing to unpack .../109-libpoppler64_0.48.0-2_amd64.deb ... Unpacking libpoppler64:amd64 (0.48.0-2) ... Selecting previously unselected package libpotrace0. Preparing to unpack .../110-libpotrace0_1.14-2_amd64.deb ... Unpacking libpotrace0 (1.14-2) ... Selecting previously unselected package libptexenc1:amd64. Preparing to unpack .../111-libptexenc1_2017.20170613.44572-2_amd64.deb ... Unpacking libptexenc1:amd64 (2017.20170613.44572-2) ... Selecting previously unselected package librostlab3. Preparing to unpack .../112-librostlab3_1.0.20-7_amd64.deb ... Unpacking librostlab3 (1.0.20-7) ... Selecting previously unselected package librostlab3-dev. Preparing to unpack .../113-librostlab3-dev_1.0.20-7_amd64.deb ... Unpacking librostlab3-dev (1.0.20-7) ... Selecting previously unselected package libsynctex1:amd64. Preparing to unpack .../114-libsynctex1_2017.20170613.44572-2_amd64.deb ... Unpacking libsynctex1:amd64 (2017.20170613.44572-2) ... Selecting previously unselected package libtexlua52:amd64. Preparing to unpack .../115-libtexlua52_2017.20170613.44572-2_amd64.deb ... Unpacking libtexlua52:amd64 (2017.20170613.44572-2) ... Selecting previously unselected package libtexluajit2:amd64. Preparing to unpack .../116-libtexluajit2_2017.20170613.44572-2_amd64.deb ... Unpacking libtexluajit2:amd64 (2017.20170613.44572-2) ... Selecting previously unselected package libxi6:amd64. Preparing to unpack .../117-libxi6_2%3a1.7.9-1_amd64.deb ... Unpacking libxi6:amd64 (2:1.7.9-1) ... Selecting previously unselected package libzzip-0-13:amd64. Preparing to unpack .../118-libzzip-0-13_0.13.62-3.1_amd64.deb ... Unpacking libzzip-0-13:amd64 (0.13.62-3.1) ... Selecting previously unselected package preview-latex-style. Preparing to unpack .../119-preview-latex-style_11.90-1_all.deb ... Unpacking preview-latex-style (11.90-1) ... Selecting previously unselected package t1utils. Preparing to unpack .../120-t1utils_1.39-2_amd64.deb ... Unpacking t1utils (1.39-2) ... Selecting previously unselected package texlive-binaries. Preparing to unpack .../121-texlive-binaries_2017.20170613.44572-2_amd64.deb ... Unpacking texlive-binaries (2017.20170613.44572-2) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../122-xdg-utils_1.1.1-1_all.deb ... Unpacking xdg-utils (1.1.1-1) ... Selecting previously unselected package texlive-base. Preparing to unpack .../123-texlive-base_2017.20170629-1_all.deb ... Unpacking texlive-base (2017.20170629-1) ... Selecting previously unselected package texlive-fonts-recommended. Preparing to unpack .../124-texlive-fonts-recommended_2017.20170629-1_all.deb ... Unpacking texlive-fonts-recommended (2017.20170629-1) ... Selecting previously unselected package texlive-latex-base. Preparing to unpack .../125-texlive-latex-base_2017.20170629-1_all.deb ... Unpacking texlive-latex-base (2017.20170629-1) ... Selecting previously unselected package texlive-latex-recommended. Preparing to unpack .../126-texlive-latex-recommended_2017.20170629-1_all.deb ... Unpacking texlive-latex-recommended (2017.20170629-1) ... Selecting previously unselected package texlive-pictures. Preparing to unpack .../127-texlive-pictures_2017.20170629-1_all.deb ... Unpacking texlive-pictures (2017.20170629-1) ... Selecting previously unselected package texlive-latex-extra. Preparing to unpack .../128-texlive-latex-extra_2017.20170629-1_all.deb ... Unpacking texlive-latex-extra (2017.20170629-1) ... Selecting previously unselected package sbuild-build-depends-librostlab-blast-dummy. Preparing to unpack .../129-sbuild-build-depends-librostlab-blast-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-librostlab-blast-dummy (0.invalid.0) ... Setting up libgs9-common (9.21~dfsg-1) ... Setting up libkpathsea6:amd64 (2017.20170613.44572-2) ... Setting up libtexlua52:amd64 (2017.20170613.44572-2) ... Setting up readline-common (7.0-3) ... Setting up libxapian30:amd64 (1.4.4-2) ... Setting up libpathplan4 (2.38.0-17) ... Setting up libexpat1:amd64 (2.2.1-3) ... Setting up libsynctex1:amd64 (2017.20170613.44572-2) ... Setting up libopenjp2-7:amd64 (2.1.2-1.1) ... Setting up libxdot4 (2.38.0-17) ... Setting up libptexenc1:amd64 (2017.20170613.44572-2) ... Setting up libjpeg62-turbo:amd64 (1:1.5.1-2) ... Setting up libarchive-zip-perl (1.59-1) ... Setting up mime-support (3.60) ... Setting up libpng16-16:amd64 (1.6.29-3) ... Setting up libtimedate-perl (2.3000-2) ... Setting up liblcms2-2:amd64 (2.8-4) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libsigsegv2:amd64 (2.11-1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up poppler-data (0.4.7-8) ... Setting up libreadline7:amd64 (7.0-3) ... Setting up groff-base (1.22.3-9) ... Setting up libglib2.0-0:amd64 (2.52.3-1) ... No schema files found: doing nothing. Setting up libllvm3.9:amd64 (1:3.9.1-10) ... Setting up d-shlibs (0.80) ... Setting up libdatrie1:amd64 (0.2.10-4+b1) ... Setting up libtiff5:amd64 (4.0.8-3) ... Setting up gettext-base (0.19.8.1-2+b1) ... Setting up libpipeline1:amd64 (1.4.1-2) ... Setting up m4 (1.4.18-1) ... Setting up librostlab3 (1.0.20-7) ... Setting up libicu57:amd64 (57.1-6) ... Setting up libnspr4:amd64 (2:4.15-1) ... Setting up ucf (3.0036) ... Setting up libxml2:amd64 (2.9.4+dfsg1-3) ... Setting up libfreetype6:amd64 (2.8-0.2) ... Setting up libmagic-mgc (1:5.30-1) ... Setting up libmagic1:amd64 (1:5.30-1) ... Setting up lsb-base (9.20161125) ... Setting up libgraphite2-3:amd64 (1.3.10-2) ... Setting up libcroco3:amd64 (0.6.12-1) ... Setting up libjbig2dec0:amd64 (0.13-4.1) ... Setting up libpixman-1-0:amd64 (0.34.0-1) ... Processing triggers for libc-bin (2.24-12) ... Setting up autotools-dev (20161112.1) ... Setting up t1utils (1.39-2) ... Setting up libclang1-3.9:amd64 (1:3.9.1-10) ... Setting up libssl1.1:amd64 (1.1.0f-3) ... Setting up libltdl7:amd64 (2.4.6-2) ... Setting up libijs-0.35:amd64 (0.35-12) ... Setting up libsqlite3-0:amd64 (3.16.2-5) ... Setting up libbison-dev:amd64 (2:3.0.4.dfsg-1+b1) ... Setting up libann0 (1.1.2+doc-6) ... Setting up libpotrace0 (1.14-2) ... Setting up libthai-data (0.1.26-1) ... Setting up bison (2:3.0.4.dfsg-1+b1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libkeyutils1:amd64 (1.5.9-9) ... Setting up bsdmainutils (9.0.12+nmu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libzzip-0-13:amd64 (0.13.62-3.1) ... Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up xdg-utils (1.1.1-1) ... Setting up libtexluajit2:amd64 (2017.20170613.44572-2) ... Setting up libcdt5 (2.38.0-17) ... Setting up librostlab3-dev (1.0.20-7) ... Setting up libx11-data (2:1.6.4-3) ... Setting up libpython2.7-stdlib:amd64 (2.7.13-2) ... Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-2) ... Setting up libidn11:amd64 (1.33-1) ... Setting up libdbus-1-3:amd64 (1.10.20-1) ... Setting up fonts-lmodern (2.004.5-3) ... Setting up libavahi-common-data:amd64 (0.6.32-2) ... Setting up libcgraph6 (2.38.0-17) ... Setting up libwebp6:amd64 (0.5.2-1) ... Setting up libfile-stripnondeterminism-perl (0.035-2) ... Setting up libpaper1:amd64 (1.1.24+nmu5) ... Creating config file /etc/papersize with new version Setting up libgts-0.7-5:amd64 (0.7.6+darcs121130-4) ... Setting up libpaper-utils (1.1.24+nmu5) ... Setting up fontconfig-config (2.12.3-0.1) ... Setting up tex-common (6.07) ... update-language: texlive-base not installed and configured, doing nothing! Setting up gettext (0.19.8.1-2+b1) ... Setting up flex (2.6.1-1.3) ... Setting up libgvpr2 (2.38.0-17) ... Setting up doxygen (1.8.13-7) ... Setting up python2.7 (2.7.13-2) ... Setting up libnss3:amd64 (2:3.31-1) ... Setting up libharfbuzz0b:amd64 (1.4.2-1) ... Setting up preview-latex-style (11.90-1) ... Setting up autoconf (2.69-10) ... Setting up libthai0:amd64 (0.1.26-1) ... Setting up file (1:5.30-1) ... Setting up libkrb5support0:amd64 (1.15-1) ... Setting up libpython-stdlib:amd64 (2.7.13-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15.1-2) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libice6:amd64 (2:1.0.9-2) ... Setting up man-db (2.7.6.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libavahi-common3:amd64 (0.6.32-2) ... Setting up libxcb1:amd64 (1.12-1) ... Setting up python (2.7.13-2) ... Setting up libtool (2.4.6-2) ... Setting up libfontconfig1:amd64 (2.12.3-0.1) ... Setting up libsm6:amd64 (2:1.2.2-1+b3) ... Setting up libk5crypto3:amd64 (1.15-1) ... Setting up libxcb-render0:amd64 (1.12-1) ... Setting up libharfbuzz-icu0:amd64 (1.4.2-1) ... Setting up po-debconf (1.0.20) ... Setting up libpoppler64:amd64 (0.48.0-2) ... Setting up libx11-6:amd64 (2:1.6.4-3) ... Setting up libxcb-shm0:amd64 (1.12-1) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libavahi-client3:amd64 (0.6.32-2) ... Setting up libkrb5-3:amd64 (1.15-1) ... Setting up fontconfig (2.12.3-0.1) ... Regenerating fonts cache... done. Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libgd3:amd64 (2.2.4-2) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up libgssapi-krb5-2:amd64 (1.15-1) ... Setting up libpango-1.0-0:amd64 (1.40.6-1) ... Setting up libcups2:amd64 (2.2.4-1) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libxaw7:amd64 (2:1.0.13-1+b2) ... Setting up libcairo2:amd64 (1.14.10-1) ... Setting up libpangoft2-1.0-0:amd64 (1.40.6-1) ... Setting up libcupsimage2:amd64 (2.2.4-1) ... Setting up libgs9:amd64 (9.21~dfsg-1) ... Setting up libpangocairo-1.0-0:amd64 (1.40.6-1) ... Setting up texlive-binaries (2017.20170613.44572-2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2017.20170629-1) ... /usr/bin/tl-paper: setting paper size for dvips to a4. /usr/bin/tl-paper: setting paper size for dvipdfmx to a4. /usr/bin/tl-paper: setting paper size for xdvi to a4. /usr/bin/tl-paper: setting paper size for pdftex to a4. Setting up texlive-fonts-recommended (2017.20170629-1) ... Setting up texlive-latex-base (2017.20170629-1) ... Setting up texlive-latex-recommended (2017.20170629-1) ... Setting up libgvc6 (2.38.0-17) ... Setting up texlive-pictures (2017.20170629-1) ... Setting up graphviz (2.38.0-17) ... Setting up texlive-latex-extra (2017.20170629-1) ... Setting up dh-autoreconf (14) ... Setting up dh-strip-nondeterminism (0.035-2) ... Setting up debhelper (10.6.2) ... Setting up sbuild-build-depends-librostlab-blast-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.24-12) ... Processing triggers for tex-common (6.07) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-2-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.28-6 dpkg-dev_1.18.24 g++-6_6.4.0-1 gcc-6_6.4.0-1 libc6-dev_2.24-12 libstdc++-6-dev_6.4.0-1 libstdc++6_7.1.0-9 linux-libc-dev_4.11.6-1 Package versions: adduser_3.115 apt_1.5~beta1 autoconf_2.69-10 automake_1:1.15.1-2 autopoint_0.19.8.1-2 autotools-dev_20161112.1 base-files_10 base-passwd_3.5.43 bash_4.4-5 binutils_2.28-6 bison_2:3.0.4.dfsg-1+b1 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-1 build-essential_12.3 bzip2_1.0.6-8.1 clang-4.0_1:4.0.1-1 coreutils_8.26-3 cpp_4:6.3.0-4d1 cpp-6_6.4.0-1 d-shlibs_0.80 dash_0.5.8-2.4 debconf_1.5.62 debfoster_2.7-2.1+b1 debhelper_10.6.2 debian-archive-keyring_2017.5 debianutils_4.8.1.1 dh-autoreconf_14 dh-strip-nondeterminism_0.035-2 diffutils_1:3.5-3 doxygen_1.8.13-7 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.4-2 e2fsprogs_1.43.4-2 eatmydata_105-5 fakeroot_1.21-3.1 file_1:5.30-1 findutils_4.6.0+git+20170606-2 flex_2.6.1-1.3 fontconfig_2.12.3-0.1 fontconfig-config_2.12.3-0.1 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-3 g++_4:6.3.0-4d1 g++-6_6.4.0-1 gcc_4:6.3.0-4d1 gcc-6_6.4.0-1 gcc-6-base_6.4.0-1 gcc-7-base_7.1.0-9 gettext_0.19.8.1-2+b1 gettext-base_0.19.8.1-2+b1 gpgv_2.1.18-8 graphviz_2.38.0-17 grep_2.27-2 groff-base_1.22.3-9 gzip_1.6-5+b1 hostname_3.18+b1 init-system-helpers_1.48 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3+b1 libann0_1.1.2+doc-6 libapt-pkg5.0_1.5~beta1 libarchive-zip-perl_1.59-1 libasan3_6.4.0-1 libatomic1_7.1.0-9 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1+b1 libavahi-client3_0.6.32-2 libavahi-common-data_0.6.32-2 libavahi-common3_0.6.32-2 libbison-dev_2:3.0.4.dfsg-1+b1 libblkid1_2.29.2-1 libbsd0_0.8.5-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-12 libc-dev-bin_2.24-12 libc6_2.24-12 libc6-dev_2.24-12 libcairo2_1.14.10-1 libcap-ng0_0.7.7-3+b1 libcc1-0_7.1.0-9 libcdt5_2.38.0-17 libcgraph6_2.38.0-17 libcilkrts5_7.1.0-9 libclang-common-4.0-dev_1:4.0.1-1 libclang1-3.9_1:3.9.1-10 libclang1-4.0_1:4.0.1-1 libcomerr2_1.43.4-2 libcroco3_0.6.12-1 libcups2_2.2.4-1 libcupsimage2_2.2.4-1 libdatrie1_0.2.10-4+b1 libdb5.3_5.3.28-12+b1 libdbus-1-3_1.10.20-1 libdebconfclient0_0.229 libdpkg-perl_1.18.24 libeatmydata1_105-5 libedit2_3.1-20170329-1 libexpat1_2.2.1-3 libfakeroot_1.21-3.1 libfdisk1_2.29.2-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.035-2 libfontconfig1_2.12.3-0.1 libfreetype6_2.8-0.2 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.4.0-1 libgcc1_1:7.1.0-9 libgcrypt20_1.7.8-1 libgd3_2.2.4-2 libgdbm3_1.8.3-14 libglib2.0-0_2.52.3-1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.13-2 libgomp1_7.1.0-9 libgpg-error0_1.27-3 libgraphite2-3_1.3.10-2 libgs9_9.21~dfsg-1 libgs9-common_9.21~dfsg-1 libgssapi-krb5-2_1.15-1 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.38.0-17 libgvpr2_2.38.0-17 libharfbuzz-icu0_1.4.2-1 libharfbuzz0b_1.4.2-1 libhogweed4_3.3-1+b1 libice6_2:1.0.9-2 libicu57_57.1-6 libidn11_1.33-1 libidn2-0_0.16-1+b1 libijs-0.35_0.35-12 libisl15_0.18-1 libitm1_7.1.0-9 libjbig0_2.1-3.1+b2 libjbig2dec0_0.13-4.1 libjpeg62-turbo_1:1.5.1-2 libjsoncpp1_1.7.4-3 libk5crypto3_1.15-1 libkeyutils1_1.5.9-9 libkpathsea6_2017.20170613.44572-2 libkrb5-3_1.15-1 libkrb5support0_1.15-1 liblcms2-2_2.8-4 libllvm3.9_1:3.9.1-10 libllvm4.0_1:4.0.1-1 liblsan0_7.1.0-9 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2+b1 liblzma5_5.2.2-1.2+b1 libmagic-mgc_1:5.30-1 libmagic1_1:5.30-1 libmount1_2.29.2-1 libmpc3_1.0.3-1+b2 libmpfr4_3.1.5-1 libmpx2_7.1.0-9 libncurses5_6.0+20161126-1 libncursesw5_6.0+20161126-1 libnettle6_3.3-1+b1 libnspr4_2:4.15-1 libnss3_2:3.31-1 libobjc-6-dev_6.4.0-1 libobjc4_7.1.0-9 libopenjp2-7_2.1.2-1.1 libp11-kit0_0.23.7-2 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpango-1.0-0_1.40.6-1 libpangocairo-1.0-0_1.40.6-1 libpangoft2-1.0-0_1.40.6-1 libpaper-utils_1.1.24+nmu5 libpaper1_1.1.24+nmu5 libpathplan4_2.38.0-17 libpcre3_2:8.39-3 libperl5.24_5.24.1-6 libpipeline1_1.4.1-2 libpixman-1-0_0.34.0-1 libpng16-16_1.6.29-3 libpoppler64_0.48.0-2 libpotrace0_1.14-2 libptexenc1_2017.20170613.44572-2 libpython-stdlib_2.7.13-2 libpython2.7-minimal_2.7.13-2 libpython2.7-stdlib_2.7.13-2 libquadmath0_7.1.0-9 libreadline7_7.0-3 librostlab3_1.0.20-7 librostlab3-dev_1.0.20-7 libselinux1_2.6-3+b2 libsemanage-common_2.6-2 libsemanage1_2.6-2+b1 libsepol1_2.6-2 libsigsegv2_2.11-1 libsm6_2:1.2.2-1+b3 libsmartcols1_2.29.2-1 libsqlite3-0_3.16.2-5 libss2_1.43.4-2 libssl1.1_1.1.0f-3 libstdc++-6-dev_6.4.0-1 libstdc++6_7.1.0-9 libsynctex1_2017.20170613.44572-2 libsystemd0_233-10 libtasn1-6_4.12-2 libtexlua52_2017.20170613.44572-2 libtexluajit2_2017.20170613.44572-2 libthai-data_0.1.26-1 libthai0_0.1.26-1 libtiff5_4.0.8-3 libtimedate-perl_2.3000-2 libtinfo5_6.0+20161126-1 libtool_2.4.6-2 libtsan0_7.1.0-9 libubsan0_7.1.0-9 libudev1_233-10 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-1 libwebp6_0.5.2-1 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libxapian30_1.4.4-2 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.12-1 libxcb-shm0_1.12-1 libxcb1_1.12-1 libxdmcp6_1:1.1.2-3 libxdot4_2.38.0-17 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml2_2.9.4+dfsg1-3 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libzzip-0-13_0.13.62-3.1 linux-libc-dev_4.11.6-1 login_1:4.4-4.1 lsb-base_9.20161125 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17+b3 mime-support_3.60 mount_2.29.2-1 multiarch-support_2.24-12 ncurses-base_6.0+20161126-1 ncurses-bin_6.0+20161126-1 passwd_1:4.4-4.1 patch_2.7.5-1+b2 perl_5.24.1-6 perl-base_5.24.1-6 perl-modules-5.24_5.24.1-6 po-debconf_1.0.20 poppler-data_0.4.7-8 preview-latex-style_11.90-1 python_2.7.13-2 python-minimal_2.7.13-2 python2.7_2.7.13-2 python2.7-minimal_2.7.13-2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-librostlab-blast-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9 sysvinit-utils_2.88dsf-59.9 t1utils_1.39-2 tar_1.29b-1.1 tex-common_6.07 texlive-base_2017.20170629-1 texlive-binaries_2017.20170613.44572-2 texlive-fonts-recommended_2017.20170629-1 texlive-latex-base_2017.20170629-1 texlive-latex-extra_2017.20170629-1 texlive-latex-recommended_2017.20170629-1 texlive-pictures_2017.20170629-1 ucf_3.0036 util-linux_2.29.2-1 x11-common_1:7.7+19 xdg-utils_1.1.1-1 xz-utils_5.2.2-1.2+b1 zlib1g_1:1.2.8.dfsg-5 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jun 20 19:24:41 2017 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./librostlab-blast_1.0.1-8.dsc dpkg-source: info: extracting librostlab-blast in /<> dpkg-source: info: unpacking librostlab-blast_1.0.1.orig.tar.gz dpkg-source: info: unpacking librostlab-blast_1.0.1-8.debian.tar.xz dpkg-source: info: applying reproducible.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-125ebd64-32a6-49d5-bbe3-41008694b8a6 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package librostlab-blast dpkg-buildpackage: info: source version 1.0.1-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build librostlab-blast-1.0.1 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with autoreconf dh_testdir debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean rm -f lib/librostlab-blast.tag make[1]: Leaving directory '/<>' dh_autoreconf_clean dh_clean debian/rules build-arch dh build-arch --with autoreconf dh_testdir -a dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:7: installing './compile' configure.ac:5: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --enable-doxygen-dot --enable-doxygen-pdf ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-dot --enable-doxygen-pdf configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for bison... bison -y checking for flex... flex checking lex output file root... lex.yy checking lex library... none needed checking whether yytext is a pointer... no checking rostlab/aux_functions.h usability... yes checking rostlab/aux_functions.h presence... yes checking for rostlab/aux_functions.h... yes checking rostlab/rostlab_stdexcept.h usability... yes checking rostlab/rostlab_stdexcept.h presence... yes checking for rostlab/rostlab_stdexcept.h... yes checking for doxygen... /usr/bin/doxygen checking for perl... /usr/bin/perl checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for egrep... /bin/egrep checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating lib/Doxyfile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j16 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in lib make[4]: Entering directory '/<>/lib' mkdir -p rostlab /bin/bash ../ylwrap blast-parser-scanner.lpp lex.yy.c blast-parser-scanner.cpp -- flex /bin/bash ../ylwrap blast-parser-parser.ypp y.tab.c blast-parser-parser.cpp y.tab.h rostlab/blast-parser-parser.h y.output blast-parser-parser.output stack.hh rostlab/blast-parser-stack.h location.hh rostlab/blast-parser-location.h position.hh rostlab/blast-parser-position.h -- bison -y /<>/lib/blast-parser-parser.ypp:22.9-17: warning: deprecated directive, use '%define api.namespace rostlab::blast' [-Wdeprecated] %define namespace "rostlab::blast" ^^^^^^^^^ /<>/lib/blast-parser-parser.ypp:22.9-17: warning: %define variable 'api.namespace' requires '{...}' values [-Wdeprecated] %define namespace "rostlab::blast" ^^^^^^^^^ updating rostlab/blast-parser-location.h updating rostlab/blast-parser-position.h updating rostlab/blast-parser-stack.h updating rostlab/blast-parser-parser.h sed -i -e 's,\by.tab.h\b,rostlab/blast-parser-parser.h,g' blast-parser-parser.cpp sed -i -e 's,\bstack.hh\b,rostlab/blast-parser-stack.h,g;s,\blocation.hh\b,rostlab/blast-parser-location.h,g;' rostlab/blast-parser-parser.h sed -i -e 's,\bposition.hh\b,rostlab/blast-parser-position.h,g;' rostlab/blast-parser-location.h make all-am make[5]: Entering directory '/<>/lib' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-blast-parser-driver.lo `test -f 'blast-parser-driver.cpp' || echo './'`blast-parser-driver.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-blast-parser-parser.lo `test -f 'blast-parser-parser.cpp' || echo './'`blast-parser-parser.cpp \ \ /bin/bash ../ylwrap `test -f 'blast-parser-scanner.lpp' || echo './'`blast-parser-scanner.lpp lex.yy.c librostlab_blast_la-blast-parser-scanner.cpp -- flex -Cfe libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-driver.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-blast-parser-driver.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-parser.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-blast-parser-parser.o In file included from blast-parser-driver.cpp:19: ./rostlab/blast-parser-driver.h:61:12: warning: use of enumeration in a nested name specifier is a C++11 extension [-Wc++11-extensions] friend YY_DECL_FRIEND; ^ ./rostlab/blast-parser-driver.h:39:27: note: expanded from macro 'YY_DECL_FRIEND' rostlab::blast::parser::token_type \ ^ ./rostlab/blast-parser-driver.h:61:12: error: C++ requires a type specifier for all declarations friend YY_DECL_FRIEND; ~~~~~~ ^ ./rostlab/blast-parser-driver.h:40:5: note: expanded from macro 'YY_DECL_FRIEND' ::yylex( rostlab::blast::parser::semantic_type* __yylval, \ ^ ./rostlab/blast-parser-driver.h:61:12: error: no function named 'yylex' with type 'int (rostlab::blast::parser::semantic_type *, rostlab::blast::parser::location_type *, rostlab::blast::parser_driver &, void *)' (aka 'int (rostlab::blast::parser::semantic_type *, rostlab::blast::location *, rostlab::blast::parser_driver &, void *)') was found in the specified scope ./rostlab/blast-parser-driver.h:40:5: note: expanded from macro 'YY_DECL_FRIEND' ::yylex( rostlab::blast::parser::semantic_type* __yylval, \ ^ In file included from blast-parser-parser.ypp:54: ./rostlab/blast-parser-driver.h:61:12: warning: use of enumeration in a nested name specifier is a C++11 extension [-Wc++11-extensions] friend YY_DECL_FRIEND; ^ ./rostlab/blast-parser-driver.h:39:27: note: expanded from macro 'YY_DECL_FRIEND' rostlab::blast::parser::token_type \ ^ ./rostlab/blast-parser-driver.h:61:12: error: C++ requires a type specifier for all declarations friend YY_DECL_FRIEND; ~~~~~~ ^ ./rostlab/blast-parser-driver.h:40:5: note: expanded from macro 'YY_DECL_FRIEND' ::yylex( rostlab::blast::parser::semantic_type* __yylval, \ ^ ./rostlab/blast-parser-driver.h:61:12: error: no function named 'yylex' with type 'int (rostlab::blast::parser::semantic_type *, rostlab::blast::parser::location_type *, rostlab::blast::parser_driver &, void *)' (aka 'int (rostlab::blast::parser::semantic_type *, rostlab::blast::location *, rostlab::blast::parser_driver &, void *)') was found in the specified scope ./rostlab/blast-parser-driver.h:40:5: note: expanded from macro 'YY_DECL_FRIEND' ::yylex( rostlab::blast::parser::semantic_type* __yylval, \ ^ In file included from blast-parser-driver.cpp:19: In file included from ./rostlab/blast-parser-driver.h:26: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:237:90: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here __os << "n = " << __r.name << " d = " << __r.desc << " Length = " << __r.length << " " << __r.hsps; ^ ./rostlab/blast-result.h:224:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::hsp& __r ) ^ In file included from blast-parser-driver.cpp:19: In file included from ./rostlab/blast-parser-driver.h:26: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:245:87: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here __os << __r.blast_version << "\n\nreferences: " << __r.references << "\n\nrounds: " << __r.rounds << "\n\nn = " << __r.q_name << " d = " << __r.q_desc << " (" << __r.q_length << ^ ./rostlab/blast-result.h:208:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::round& __r ) ^ In file included from blast-parser-driver.cpp:19: In file included from ./rostlab/blast-parser-driver.h:26: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:246:143: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here " letters)\n\nDatabase: " << __r.db_name << " " << __r.db_nseq << " sequences; " << __r.db_nletter << " total letters\n\none-line desc: " << __r.onelines << "\n\n" << ^ ./rostlab/blast-result.h:216:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::oneline& __r ) ^ In file included from blast-parser-driver.cpp:19: In file included from ./rostlab/blast-parser-driver.h:26: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:247:59: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here ( __r.converged ? "CONVERGED!\n\n" : "" ) << "hits: " << __r.hits << "\n\n" << __r.tail; ^ ./rostlab/blast-result.h:235:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::hit& __r ) ^ 1 warning and 6 errors generated. Makefile:550: recipe for target 'librostlab_blast_la-blast-parser-driver.lo' failed make[5]: *** [librostlab_blast_la-blast-parser-driver.lo] Error 1 make[5]: *** Waiting for unfinished jobs.... In file included from blast-parser-parser.cpp:46: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:237:90: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here __os << "n = " << __r.name << " d = " << __r.desc << " Length = " << __r.length << " " << __r.hsps; ^ ./rostlab/blast-result.h:224:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::hsp& __r ) ^ In file included from blast-parser-parser.cpp:46: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:245:87: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here __os << __r.blast_version << "\n\nreferences: " << __r.references << "\n\nrounds: " << __r.rounds << "\n\nn = " << __r.q_name << " d = " << __r.q_desc << " (" << __r.q_length << ^ ./rostlab/blast-result.h:208:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::round& __r ) ^ In file included from blast-parser-parser.cpp:46: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:246:143: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here " letters)\n\nDatabase: " << __r.db_name << " " << __r.db_nseq << " sequences; " << __r.db_nletter << " total letters\n\none-line desc: " << __r.onelines << "\n\n" << ^ ./rostlab/blast-result.h:216:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::oneline& __r ) ^ In file included from blast-parser-parser.cpp:46: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:247:59: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here ( __r.converged ? "CONVERGED!\n\n" : "" ) << "hits: " << __r.hits << "\n\n" << __r.tail; ^ ./rostlab/blast-result.h:235:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::hit& __r ) ^ 1 warning and 6 errors generated. Makefile:557: recipe for target 'librostlab_blast_la-blast-parser-parser.lo' failed make[5]: *** [librostlab_blast_la-blast-parser-parser.lo] Error 1 make[5]: Leaving directory '/<>/lib' Makefile:440: recipe for target 'all' failed make[4]: *** [all] Error 2 make[4]: Leaving directory '/<>/lib' Makefile:482: recipe for target 'all-recursive' failed make[3]: *** [all-recursive] Error 1 make[3]: Leaving directory '/<>' Makefile:393: recipe for target 'all' failed make[2]: *** [all] Error 2 make[2]: Leaving directory '/<>' dh_auto_build: make -j16 returned exit code 2 debian/rules:25: recipe for target 'override_dh_auto_build' failed make[1]: *** [override_dh_auto_build] Error 2 make[1]: Leaving directory '/<>' debian/rules:11: recipe for target 'build-arch' failed make: *** [build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 2017-07-06T18:10:02Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 8984 Build-Time: 12 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 28 Job: librostlab-blast_1.0.1-8 Machine Architecture: amd64 Package: librostlab-blast Package-Time: 57 Source-Version: 1.0.1-8 Space: 8984 Status: attempted Version: 1.0.1-8 -------------------------------------------------------------------------------- Finished at 2017-07-06T18:10:02Z Build needed 00:00:57, 8984k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 58.738481289s DC-Time-Estimation: 58.738481289 versus expected 786 (r/m: 12.381346993511643 ; m: 58.738481289)