DC-Build-Header: getfem++ 5.2+dfsg1-4 / 2017-08-20 17:28:06 +0000 DC-Task: type:rebuild-binarch-only source:getfem++ version:5.2+dfsg1-4 chroot:unstable esttime:1953 logfile:/tmp/getfem++_5.2+dfsg1-4_unstable_clang5.0.log modes:clang50:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang50 getfem++_5.2+dfsg1-4' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-45-151.eu-central-1.compute.internal +==============================================================================+ | getfem++ 5.2+dfsg1-4 (amd64) Sun, 20 Aug 2017 17:28:06 +0000 | +==============================================================================+ Package: getfem++ Version: 5.2+dfsg1-4 Source Version: 5.2+dfsg1-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-c343bdf3-b362-4b1b-bf15-8d029b6ab4de' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang50 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=5.0 + echo 'Install of clang-5.0' Install of clang-5.0 + apt-get update Hit:1 http://127.0.0.1:9999/debian unstable InRelease Get:2 http://127.0.0.1:9999/debian unstable/main Translation-en [5785 kB] Fetched 5785 kB in 1s (3839 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-5.0 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libasan3 libbsd0 libclang-common-5.0-dev libclang1-5.0 libedit2 libgcc-6-dev libjsoncpp1 libllvm5.0 libncurses5 libobjc-6-dev libobjc4 libstdc++-6-dev Suggested packages: gnustep gnustep-devel clang-5.0-doc libomp-dev libstdc++-6-doc Recommended packages: llvm-5.0-dev python libgpm2 The following NEW packages will be installed: clang-5.0 libasan3 libbsd0 libclang-common-5.0-dev libclang1-5.0 libedit2 libgcc-6-dev libjsoncpp1 libllvm5.0 libncurses5 libobjc-6-dev libobjc4 libstdc++-6-dev 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. Need to get 88.4 MB of archives. After this operation, 376 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.6-1 [90.3 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5 amd64 6.0+20170715-2 [93.8 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20170329-1 [85.2 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libllvm5.0 amd64 1:5.0~+rc2-1 [13.5 MB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-5.0 amd64 1:5.0~+rc2-1 [6729 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libasan3 amd64 6.4.0-3 [311 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libgcc-6-dev amd64 6.4.0-3 [2296 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 libstdc++-6-dev amd64 6.4.0-3 [1421 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 7.2.0-1 [51.0 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-6-dev amd64 6.4.0-3 [197 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-5.0-dev amd64 1:5.0~+rc2-1 [1989 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 clang-5.0 amd64 1:5.0~+rc2-1 [61.6 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 88.4 MB in 0s (97.3 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9822 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.8.6-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.6-1) ... Selecting previously unselected package libncurses5:amd64. Preparing to unpack .../01-libncurses5_6.0+20170715-2_amd64.deb ... Unpacking libncurses5:amd64 (6.0+20170715-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../02-libedit2_3.1-20170329-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20170329-1) ... Selecting previously unselected package libllvm5.0:amd64. Preparing to unpack .../03-libllvm5.0_1%3a5.0~+rc2-1_amd64.deb ... Unpacking libllvm5.0:amd64 (1:5.0~+rc2-1) ... Selecting previously unselected package libclang1-5.0:amd64. Preparing to unpack .../04-libclang1-5.0_1%3a5.0~+rc2-1_amd64.deb ... Unpacking libclang1-5.0:amd64 (1:5.0~+rc2-1) ... Selecting previously unselected package libjsoncpp1:amd64. Preparing to unpack .../05-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package libasan3:amd64. Preparing to unpack .../06-libasan3_6.4.0-3_amd64.deb ... Unpacking libasan3:amd64 (6.4.0-3) ... Selecting previously unselected package libgcc-6-dev:amd64. Preparing to unpack .../07-libgcc-6-dev_6.4.0-3_amd64.deb ... Unpacking libgcc-6-dev:amd64 (6.4.0-3) ... Selecting previously unselected package libstdc++-6-dev:amd64. Preparing to unpack .../08-libstdc++-6-dev_6.4.0-3_amd64.deb ... Unpacking libstdc++-6-dev:amd64 (6.4.0-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../09-libobjc4_7.2.0-1_amd64.deb ... Unpacking libobjc4:amd64 (7.2.0-1) ... Selecting previously unselected package libobjc-6-dev:amd64. Preparing to unpack .../10-libobjc-6-dev_6.4.0-3_amd64.deb ... Unpacking libobjc-6-dev:amd64 (6.4.0-3) ... Selecting previously unselected package libclang-common-5.0-dev. Preparing to unpack .../11-libclang-common-5.0-dev_1%3a5.0~+rc2-1_amd64.deb ... Unpacking libclang-common-5.0-dev (1:5.0~+rc2-1) ... Selecting previously unselected package clang-5.0. Preparing to unpack .../12-clang-5.0_1%3a5.0~+rc2-1_amd64.deb ... Unpacking clang-5.0 (1:5.0~+rc2-1) ... Setting up libncurses5:amd64 (6.0+20170715-2) ... Setting up libobjc4:amd64 (7.2.0-1) ... Setting up libasan3:amd64 (6.4.0-3) ... Setting up libgcc-6-dev:amd64 (6.4.0-3) ... Setting up libstdc++-6-dev:amd64 (6.4.0-3) ... Setting up libbsd0:amd64 (0.8.6-1) ... Processing triggers for libc-bin (2.24-14) ... Setting up libobjc-6-dev:amd64 (6.4.0-3) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libllvm5.0:amd64 (1:5.0~+rc2-1) ... Setting up libclang1-5.0:amd64 (1:5.0~+rc2-1) ... Setting up libclang-common-5.0-dev (1:5.0~+rc2-1) ... Setting up clang-5.0 (1:5.0~+rc2-1) ... Processing triggers for libc-bin (2.24-14) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-5.0 g++-4.6 + ln -s clang-5.0 gcc-4.6 + ln -s clang-5.0 cpp-4.6 + ln -s clang-5.0 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-5.0 g++-4.7 + ln -s clang-5.0 gcc-4.7 + ln -s clang-5.0 cpp-4.7 + ln -s clang-5.0 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-5.0 g++-4.8 + ln -s clang-5.0 gcc-4.8 + ln -s clang-5.0 cpp-4.8 + ln -s clang-5.0 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-5.0 g++-4.9 + ln -s clang-5.0 gcc-4.9 + ln -s clang-5.0 cpp-4.9 + ln -s clang-5.0 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-5.0 g++-5 + ln -s clang-5.0 gcc-5 + ln -s clang-5.0 cpp-5 + ln -s clang-5.0 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-5.0 g++-6 + ln -s clang-5.0 gcc-6 + ln -s clang-5.0 cpp-6 + ln -s clang-5.0 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-5.0 g++-7 + ln -s clang-5.0 gcc-7 + ln -s clang-5.0 cpp-7 + ln -s clang-5.0 gcc + echo 'gcc-7 hold' + dpkg --set-selections + echo 'g++-7 hold' + dpkg --set-selections + cd - /build/getfem++-7J40nX + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang50'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'getfem++' packaging is maintained in the 'Git' version control system at: https://anonscm.debian.org/git/debian-science/packages/getfem.git Please use: git clone https://anonscm.debian.org/git/debian-science/packages/getfem.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5710 kB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main getfem++ 5.2+dfsg1-4 (dsc) [2430 B] Get:2 http://127.0.0.1:9999/debian unstable/main getfem++ 5.2+dfsg1-4 (tar) [5690 kB] Get:3 http://127.0.0.1:9999/debian unstable/main getfem++ 5.2+dfsg1-4 (diff) [17.3 kB] Fetched 5710 kB in 0s (19.5 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/getfem++-7J40nX/getfem++-5.2+dfsg1' with '<>' I: NOTICE: Log filtering will replace 'build/getfem++-7J40nX' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/build/getfem++-7J40nX/resolver-VGM81E/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ InRelease Get:2 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ Release [957 B] Ign:3 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ Release.gpg Get:4 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ Sources [349 B] Get:5 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 784 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [784 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 784 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 11331 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: autoconf, automake, debhelper (>= 10), dh-python, libblas-dev, libboost-all-dev, libmetis-dev, libmumps-seq-dev, libmuparser-dev, libqhull-dev, libsuperlu-dev, libtool, python-all-dev, python-numpy, python-scipy Filtered Build-Depends: autoconf, automake, debhelper (>= 10), dh-python, libblas-dev, libboost-all-dev, libmetis-dev, libmumps-seq-dev, libmuparser-dev, libqhull-dev, libsuperlu-dev, libtool, python-all-dev, python-numpy, python-scipy dpkg-deb: building package 'sbuild-build-depends-getfem++-dummy' in '/build/getfem++-7J40nX/resolver-VGM81E/apt_archive/sbuild-build-depends-getfem++-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-getfem++-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ InRelease Get:2 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ Release [963 B] Ign:3 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ Release.gpg Get:4 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ Sources [580 B] Get:5 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ Packages [654 B] Fetched 2197 B in 0s (0 B/s) Reading package lists... Reading package lists... Install getfem++ build dependencies (apt-based resolver) -------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base icu-devtools intltool-debian libarchive-zip-perl libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libboost-all-dev libboost-atomic-dev libboost-atomic1.62-dev libboost-atomic1.62.0 libboost-chrono-dev libboost-chrono1.62-dev libboost-chrono1.62.0 libboost-context-dev libboost-context1.62-dev libboost-context1.62.0 libboost-coroutine-dev libboost-coroutine1.62-dev libboost-coroutine1.62.0 libboost-date-time-dev libboost-date-time1.62-dev libboost-date-time1.62.0 libboost-dev libboost-exception-dev libboost-exception1.62-dev libboost-fiber-dev libboost-fiber1.62-dev libboost-fiber1.62.0 libboost-filesystem-dev libboost-filesystem1.62-dev libboost-filesystem1.62.0 libboost-graph-dev libboost-graph-parallel-dev libboost-graph-parallel1.62-dev libboost-graph-parallel1.62.0 libboost-graph1.62-dev libboost-graph1.62.0 libboost-iostreams-dev libboost-iostreams1.62-dev libboost-iostreams1.62.0 libboost-locale-dev libboost-locale1.62-dev libboost-locale1.62.0 libboost-log-dev libboost-log1.62-dev libboost-log1.62.0 libboost-math-dev libboost-math1.62-dev libboost-math1.62.0 libboost-mpi-dev libboost-mpi-python-dev libboost-mpi-python1.62-dev libboost-mpi-python1.62.0 libboost-mpi1.62-dev libboost-mpi1.62.0 libboost-program-options-dev libboost-program-options1.62-dev libboost-program-options1.62.0 libboost-python-dev libboost-python1.62-dev libboost-python1.62.0 libboost-random-dev libboost-random1.62-dev libboost-random1.62.0 libboost-regex-dev libboost-regex1.62-dev libboost-regex1.62.0 libboost-serialization-dev libboost-serialization1.62-dev libboost-serialization1.62.0 libboost-signals-dev libboost-signals1.62-dev libboost-signals1.62.0 libboost-system-dev libboost-system1.62-dev libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev libboost-test1.62.0 libboost-thread-dev libboost-thread1.62-dev libboost-thread1.62.0 libboost-timer-dev libboost-timer1.62-dev libboost-timer1.62.0 libboost-tools-dev libboost-type-erasure-dev libboost-type-erasure1.62-dev libboost-type-erasure1.62.0 libboost-wave-dev libboost-wave1.62-dev libboost-wave1.62.0 libboost1.62-dev libboost1.62-tools-dev libcroco3 libexpat1 libexpat1-dev libfabric1 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran3 libgfortran4 libglib2.0-0 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu-dev libicu57 liblapack3 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmetis-dev libmetis5 libmpdec2 libmumps-5.1.1 libmumps-dev libmumps-seq-5.1.1 libmumps-seq-dev libmuparser-dev libmuparser2v5 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpipeline1 libpsm-infinipath1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.5 libpython3.5-dev libpython3.5-minimal libpython3.5-stdlib libqhull-dev libqhull7 librdmacm1 libreadline7 libscalapack-mpi-dev libscalapack-openmpi1 libscotch-5.1 libsigsegv2 libsqlite3-0 libssl1.1 libsuperlu-dev libsuperlu5 libtimedate-perl libtool libxml2 m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common po-debconf python python-all python-all-dev python-decorator python-dev python-minimal python-numpy python-scipy python2.7 python2.7-dev python2.7-minimal python3 python3-dev python3-minimal python3.5 python3.5-dev python3.5-minimal readline-common Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-7-multilib gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff liblapack-doc libboost-doc graphviz libboost1.62-doc gccxml libmpfrc++-dev libntl-dev xsltproc doxygen docbook-xml docbook-xsl default-jdk fop libhwloc-contrib-plugins icu-doc libtool-doc openmpi-doc pciutils scalapack-doc libsuperlu-doc gcj-jdk m4-doc less www-browser opencl-icd libmail-box-perl python-doc python-tk python-nose python-numpy-dbg python-numpy-doc python-scipy-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3.5-venv python3.5-doc readline-doc Recommended packages: curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs xml-core libmail-sendmail-perl python-imaging The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base icu-devtools intltool-debian libarchive-zip-perl libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libboost-all-dev libboost-atomic-dev libboost-atomic1.62-dev libboost-atomic1.62.0 libboost-chrono-dev libboost-chrono1.62-dev libboost-chrono1.62.0 libboost-context-dev libboost-context1.62-dev libboost-context1.62.0 libboost-coroutine-dev libboost-coroutine1.62-dev libboost-coroutine1.62.0 libboost-date-time-dev libboost-date-time1.62-dev libboost-date-time1.62.0 libboost-dev libboost-exception-dev libboost-exception1.62-dev libboost-fiber-dev libboost-fiber1.62-dev libboost-fiber1.62.0 libboost-filesystem-dev libboost-filesystem1.62-dev libboost-filesystem1.62.0 libboost-graph-dev libboost-graph-parallel-dev libboost-graph-parallel1.62-dev libboost-graph-parallel1.62.0 libboost-graph1.62-dev libboost-graph1.62.0 libboost-iostreams-dev libboost-iostreams1.62-dev libboost-iostreams1.62.0 libboost-locale-dev libboost-locale1.62-dev libboost-locale1.62.0 libboost-log-dev libboost-log1.62-dev libboost-log1.62.0 libboost-math-dev libboost-math1.62-dev libboost-math1.62.0 libboost-mpi-dev libboost-mpi-python-dev libboost-mpi-python1.62-dev libboost-mpi-python1.62.0 libboost-mpi1.62-dev libboost-mpi1.62.0 libboost-program-options-dev libboost-program-options1.62-dev libboost-program-options1.62.0 libboost-python-dev libboost-python1.62-dev libboost-python1.62.0 libboost-random-dev libboost-random1.62-dev libboost-random1.62.0 libboost-regex-dev libboost-regex1.62-dev libboost-regex1.62.0 libboost-serialization-dev libboost-serialization1.62-dev libboost-serialization1.62.0 libboost-signals-dev libboost-signals1.62-dev libboost-signals1.62.0 libboost-system-dev libboost-system1.62-dev libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev libboost-test1.62.0 libboost-thread-dev libboost-thread1.62-dev libboost-thread1.62.0 libboost-timer-dev libboost-timer1.62-dev libboost-timer1.62.0 libboost-tools-dev libboost-type-erasure-dev libboost-type-erasure1.62-dev libboost-type-erasure1.62.0 libboost-wave-dev libboost-wave1.62-dev libboost-wave1.62.0 libboost1.62-dev libboost1.62-tools-dev libcroco3 libexpat1 libexpat1-dev libfabric1 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran3 libgfortran4 libglib2.0-0 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu-dev libicu57 liblapack3 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmetis-dev libmetis5 libmpdec2 libmumps-5.1.1 libmumps-dev libmumps-seq-5.1.1 libmumps-seq-dev libmuparser-dev libmuparser2v5 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpipeline1 libpsm-infinipath1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.5 libpython3.5-dev libpython3.5-minimal libpython3.5-stdlib libqhull-dev libqhull7 librdmacm1 libreadline7 libscalapack-mpi-dev libscalapack-openmpi1 libscotch-5.1 libsigsegv2 libsqlite3-0 libssl1.1 libsuperlu-dev libsuperlu5 libtimedate-perl libtool libxml2 m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common po-debconf python python-all python-all-dev python-decorator python-dev python-minimal python-numpy python-scipy python2.7 python2.7-dev python2.7-minimal python3 python3-dev python3-minimal python3.5 python3.5-dev python3.5-minimal readline-common sbuild-build-depends-getfem++-dummy 0 upgraded, 206 newly installed, 0 to remove and 0 not upgraded. Need to get 196 MB of archives. After this operation, 790 MB of additional disk space will be used. Get:1 copy:/build/getfem++-7J40nX/resolver-VGM81E/apt_archive ./ sbuild-build-depends-getfem++-dummy 0.invalid.0 [870 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-9 [1160 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 9.0.12+nmu1 [186 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.4.2-1 [28.3 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.7.6.1-2 [1044 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-minimal amd64 2.7.13-4 [392 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-minimal amd64 2.7.13-4 [1370 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 python-minimal amd64 2.7.13-2 [40.5 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 mime-support all 3.60 [36.7 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.3-1 [87.5 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 7.0-3 [70.4 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libreadline7 amd64 7.0-3 [151 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.19.3-3 [582 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.1 amd64 1.1.0f-4 [1349 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-stdlib amd64 2.7.13-4 [1898 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 python2.7 amd64 2.7.13-4 [292 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 libpython-stdlib amd64 2.7.13-2 [20.0 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 python amd64 2.7.13-2 [154 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-minimal amd64 3.5.4-2 [579 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 python3.5-minimal amd64 3.5.4-2 [1683 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 python3-minimal amd64 3.5.3-3 [35.4 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 libmpdec2 amd64 2.4.2-1 [85.2 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-stdlib amd64 3.5.4-2 [2174 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 python3.5 amd64 3.5.4-2 [241 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 libpython3-stdlib amd64 3.5.3-3 [18.8 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 dh-python all 2.20170125 [86.8 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 python3 amd64 3.5.3-3 [21.8 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.31-1 [223 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.31-1 [112 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.31-1 [64.2 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-2+b1 [122 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-6 [7701 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-3 [715 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.11-1 [29.9 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-10 [338 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20161112.1 [73.4 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-2 [736 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-2 [433 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2 [545 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 14 [15.9 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.59-1 [95.5 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.038-1 [17.6 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.038-1 [11.1 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.53.4-3 [2796 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-1 [144 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-2+b1 [1301 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 10.7.2 [975 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran4 amd64 7.2.0-1 [481 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran-7-dev amd64 7.2.0-1 [519 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 gfortran-7 amd64 7.2.0-1 [33.5 MB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 gfortran amd64 4:7.1.0-2 [1354 B] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 icu-devtools amd64 57.1-6 [178 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 libltdl7 amd64 2.4.6-2 [389 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 libnuma1 amd64 2.0.11-2.1 [33.3 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc5 amd64 1.11.5-1 [105 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libnl-3-200 amd64 3.2.27-2 [61.5 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 libnl-route-3-200 amd64 3.2.27-2 [136 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 libibverbs1 amd64 1.2.1-2 [39.3 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+19.g67c0807.open-3 [169 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 librdmacm1 amd64 1.1.0-2 [49.4 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 libfabric1 amd64 1.4.0-1 [259 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran3 amd64 6.4.0-3 [266 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 libpciaccess0 amd64 0.13.4-1+b2 [50.0 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1 [36.8 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc-plugins amd64 1.11.5-1 [16.1 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 libopenmpi2 amd64 2.1.1-6 [2062 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 openmpi-common all 2.1.1-6 [154 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 openmpi-bin amd64 2.1.1-6 [193 kB] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 mpi-default-bin amd64 1.8 [4050 B] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 libblacs-openmpi1 amd64 1.1-40 [53.6 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 libibverbs-dev amd64 1.2.1-2 [107 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 libnuma-dev amd64 2.0.11-2.1 [46.0 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 libltdl-dev amd64 2.4.6-2 [161 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc-dev amd64 1.11.5-1 [167 kB] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 libopenmpi-dev amd64 2.1.1-6 [1026 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 mpi-default-dev amd64 1.8 [4846 B] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 libblacs-mpi-dev amd64 1.1-40 [50.9 kB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 libblas-common amd64 3.7.1-1 [14.6 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 libblas3 amd64 3.7.1-1 [156 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 libblas-dev amd64 3.7.1-1 [162 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 libboost1.62-dev amd64 1.62.0+dfsg-4+b1 [7053 kB] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libboost-dev amd64 1.62.0.1 [3632 B] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 libboost1.62-tools-dev amd64 1.62.0+dfsg-4+b1 [1202 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libboost-tools-dev amd64 1.62.0.1 [3592 B] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 libboost-atomic1.62.0 amd64 1.62.0+dfsg-4+b1 [30.8 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libboost-atomic1.62-dev amd64 1.62.0+dfsg-4+b1 [29.7 kB] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 libboost-atomic-dev amd64 1.62.0.1 [3726 B] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 libboost-system1.62.0 amd64 1.62.0+dfsg-4+b1 [32.7 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 libboost-chrono1.62.0 amd64 1.62.0+dfsg-4+b1 [36.3 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 libboost-chrono1.62-dev amd64 1.62.0+dfsg-4+b1 [36.7 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 libboost-chrono-dev amd64 1.62.0.1 [4048 B] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 libboost-context1.62.0 amd64 1.62.0+dfsg-4+b1 [31.8 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 libboost-context1.62-dev amd64 1.62.0+dfsg-4+b1 [31.1 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 libboost-context-dev amd64 1.62.0.1 [3618 B] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 libboost-thread1.62.0 amd64 1.62.0+dfsg-4+b1 [71.8 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 libboost-coroutine1.62.0 amd64 1.62.0+dfsg-4+b1 [44.2 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 libboost-coroutine1.62-dev amd64 1.62.0+dfsg-4+b1 [44.8 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 libboost-coroutine-dev amd64 1.62.0.1 [3690 B] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 libboost-date-time1.62.0 amd64 1.62.0+dfsg-4+b1 [43.2 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 libboost-serialization1.62.0 amd64 1.62.0+dfsg-4+b1 [126 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 libboost-serialization1.62-dev amd64 1.62.0+dfsg-4+b1 [163 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 libboost-date-time1.62-dev amd64 1.62.0+dfsg-4+b1 [50.4 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 libboost-date-time-dev amd64 1.62.0.1 [3418 B] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 libboost-exception1.62-dev amd64 1.62.0+dfsg-4+b1 [29.1 kB] Get:109 http://127.0.0.1:9999/debian unstable/main amd64 libboost-exception-dev amd64 1.62.0.1 [3410 B] Get:110 http://127.0.0.1:9999/debian unstable/main amd64 libboost-fiber1.62.0 amd64 1.62.0+dfsg-4+b1 [50.7 kB] Get:111 http://127.0.0.1:9999/debian unstable/main amd64 libboost-fiber1.62-dev amd64 1.62.0+dfsg-4+b1 [54.2 kB] Get:112 http://127.0.0.1:9999/debian unstable/main amd64 libboost-fiber-dev amd64 1.62.0.1 [3840 B] Get:113 http://127.0.0.1:9999/debian unstable/main amd64 libboost-filesystem1.62.0 amd64 1.62.0+dfsg-4+b1 [63.6 kB] Get:114 http://127.0.0.1:9999/debian unstable/main amd64 libboost-system1.62-dev amd64 1.62.0+dfsg-4+b1 [34.2 kB] Get:115 http://127.0.0.1:9999/debian unstable/main amd64 libboost-filesystem1.62-dev amd64 1.62.0+dfsg-4+b1 [73.2 kB] Get:116 http://127.0.0.1:9999/debian unstable/main amd64 libboost-filesystem-dev amd64 1.62.0.1 [3448 B] Get:117 http://127.0.0.1:9999/debian unstable/main amd64 libboost-regex1.62.0 amd64 1.62.0+dfsg-4+b1 [288 kB] Get:118 http://127.0.0.1:9999/debian unstable/main amd64 libboost-graph1.62.0 amd64 1.62.0+dfsg-4+b1 [119 kB] Get:119 http://127.0.0.1:9999/debian unstable/main amd64 libboost-timer1.62.0 amd64 1.62.0+dfsg-4+b1 [34.8 kB] Get:120 http://127.0.0.1:9999/debian unstable/main amd64 libboost-test1.62.0 amd64 1.62.0+dfsg-4+b1 [255 kB] Get:121 http://127.0.0.1:9999/debian unstable/main amd64 libboost-test1.62-dev amd64 1.62.0+dfsg-4+b1 [301 kB] Get:122 http://127.0.0.1:9999/debian unstable/main amd64 libboost-graph1.62-dev amd64 1.62.0+dfsg-4+b1 [127 kB] Get:123 http://127.0.0.1:9999/debian unstable/main amd64 libboost-graph-dev amd64 1.62.0.1 [3510 B] Get:124 http://127.0.0.1:9999/debian unstable/main amd64 libboost-mpi1.62.0 amd64 1.62.0+dfsg-4+b1 [70.9 kB] Get:125 http://127.0.0.1:9999/debian unstable/main amd64 libboost-graph-parallel1.62.0 amd64 1.62.0+dfsg-4+b1 [86.4 kB] Get:126 http://127.0.0.1:9999/debian unstable/main amd64 libboost-graph-parallel1.62-dev amd64 1.62.0+dfsg-4+b1 [89.1 kB] Get:127 http://127.0.0.1:9999/debian unstable/main amd64 libboost-graph-parallel-dev amd64 1.62.0.1 [3546 B] Get:128 http://127.0.0.1:9999/debian unstable/main amd64 libicu-dev amd64 57.1-6 [16.5 MB] Get:129 http://127.0.0.1:9999/debian unstable/main amd64 libboost-regex1.62-dev amd64 1.62.0+dfsg-4+b1 [335 kB] Get:130 http://127.0.0.1:9999/debian unstable/main amd64 libboost-iostreams1.62.0 amd64 1.62.0+dfsg-4+b1 [51.1 kB] Get:131 http://127.0.0.1:9999/debian unstable/main amd64 libboost-iostreams1.62-dev amd64 1.62.0+dfsg-4+b1 [57.5 kB] Get:132 http://127.0.0.1:9999/debian unstable/main amd64 libboost-iostreams-dev amd64 1.62.0.1 [3408 B] Get:133 http://127.0.0.1:9999/debian unstable/main amd64 libboost-locale1.62.0 amd64 1.62.0+dfsg-4+b1 [263 kB] Get:134 http://127.0.0.1:9999/debian unstable/main amd64 libboost-locale1.62-dev amd64 1.62.0+dfsg-4+b1 [339 kB] Get:135 http://127.0.0.1:9999/debian unstable/main amd64 libboost-locale-dev amd64 1.62.0.1 [3752 B] Get:136 http://127.0.0.1:9999/debian unstable/main amd64 libboost-log1.62.0 amd64 1.62.0+dfsg-4+b1 [398 kB] Get:137 http://127.0.0.1:9999/debian unstable/main amd64 libboost-thread1.62-dev amd64 1.62.0+dfsg-4+b1 [71.6 kB] Get:138 http://127.0.0.1:9999/debian unstable/main amd64 libboost-log1.62-dev amd64 1.62.0+dfsg-4+b1 [545 kB] Get:139 http://127.0.0.1:9999/debian unstable/main amd64 libboost-log-dev amd64 1.62.0.1 [3616 B] Get:140 http://127.0.0.1:9999/debian unstable/main amd64 libboost-math1.62.0 amd64 1.62.0+dfsg-4+b1 [315 kB] Get:141 http://127.0.0.1:9999/debian unstable/main amd64 libboost-math1.62-dev amd64 1.62.0+dfsg-4+b1 [540 kB] Get:142 http://127.0.0.1:9999/debian unstable/main amd64 libboost-math-dev amd64 1.62.0.1 [3618 B] Get:143 http://127.0.0.1:9999/debian unstable/main amd64 libboost-mpi1.62-dev amd64 1.62.0+dfsg-4+b1 [154 kB] Get:144 http://127.0.0.1:9999/debian unstable/main amd64 libboost-mpi-dev amd64 1.62.0.1 [3500 B] Get:145 http://127.0.0.1:9999/debian unstable/main amd64 libboost-python1.62.0 amd64 1.62.0+dfsg-4+b1 [138 kB] Get:146 http://127.0.0.1:9999/debian unstable/main amd64 libboost-mpi-python1.62.0 amd64 1.62.0+dfsg-4+b1 [233 kB] Get:147 http://127.0.0.1:9999/debian unstable/main amd64 libboost-mpi-python1.62-dev amd64 1.62.0+dfsg-4+b1 [49.0 kB] Get:148 http://127.0.0.1:9999/debian unstable/main amd64 libboost-mpi-python-dev amd64 1.62.0.1 [3538 B] Get:149 http://127.0.0.1:9999/debian unstable/main amd64 libboost-program-options1.62.0 amd64 1.62.0+dfsg-4+b1 [160 kB] Get:150 http://127.0.0.1:9999/debian unstable/main amd64 libboost-program-options1.62-dev amd64 1.62.0+dfsg-4+b1 [184 kB] Get:151 http://127.0.0.1:9999/debian unstable/main amd64 libboost-program-options-dev amd64 1.62.0.1 [3430 B] Get:152 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7 amd64 2.7.13-4 [1073 kB] Get:153 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1-dev amd64 2.2.3-1 [136 kB] Get:154 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-dev amd64 2.7.13-4 [28.2 MB] Get:155 http://127.0.0.1:9999/debian unstable/main amd64 libpython-dev amd64 2.7.13-2 [20.1 kB] Get:156 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-dev amd64 2.7.13-4 [290 kB] Get:157 http://127.0.0.1:9999/debian unstable/main amd64 python-dev amd64 2.7.13-2 [1126 B] Get:158 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5 amd64 3.5.4-2 [1366 kB] Get:159 http://127.0.0.1:9999/debian unstable/main amd64 libpython3.5-dev amd64 3.5.4-2 [38.0 MB] Get:160 http://127.0.0.1:9999/debian unstable/main amd64 libpython3-dev amd64 3.5.3-3 [18.9 kB] Get:161 http://127.0.0.1:9999/debian unstable/main amd64 python3.5-dev amd64 3.5.4-2 [430 kB] Get:162 http://127.0.0.1:9999/debian unstable/main amd64 python3-dev amd64 3.5.3-3 [1154 B] Get:163 http://127.0.0.1:9999/debian unstable/main amd64 libboost-python1.62-dev amd64 1.62.0+dfsg-4+b1 [166 kB] Get:164 http://127.0.0.1:9999/debian unstable/main amd64 libboost-python-dev amd64 1.62.0.1 [3802 B] Get:165 http://127.0.0.1:9999/debian unstable/main amd64 libboost-random1.62.0 amd64 1.62.0+dfsg-4+b1 [35.8 kB] Get:166 http://127.0.0.1:9999/debian unstable/main amd64 libboost-random1.62-dev amd64 1.62.0+dfsg-4+b1 [35.1 kB] Get:167 http://127.0.0.1:9999/debian unstable/main amd64 libboost-random-dev amd64 1.62.0.1 [3420 B] Get:168 http://127.0.0.1:9999/debian unstable/main amd64 libboost-regex-dev amd64 1.62.0.1 [3674 B] Get:169 http://127.0.0.1:9999/debian unstable/main amd64 libboost-serialization-dev amd64 1.62.0.1 [3642 B] Get:170 http://127.0.0.1:9999/debian unstable/main amd64 libboost-signals1.62.0 amd64 1.62.0+dfsg-4+b1 [54.4 kB] Get:171 http://127.0.0.1:9999/debian unstable/main amd64 libboost-signals1.62-dev amd64 1.62.0+dfsg-4+b1 [58.1 kB] Get:172 http://127.0.0.1:9999/debian unstable/main amd64 libboost-signals-dev amd64 1.62.0.1 [3478 B] Get:173 http://127.0.0.1:9999/debian unstable/main amd64 libboost-system-dev amd64 1.62.0.1 [3554 B] Get:174 http://127.0.0.1:9999/debian unstable/main amd64 libboost-test-dev amd64 1.62.0.1 [3456 B] Get:175 http://127.0.0.1:9999/debian unstable/main amd64 libboost-thread-dev amd64 1.62.0.1 [3442 B] Get:176 http://127.0.0.1:9999/debian unstable/main amd64 libboost-timer1.62-dev amd64 1.62.0+dfsg-4+b1 [34.4 kB] Get:177 http://127.0.0.1:9999/debian unstable/main amd64 libboost-timer-dev amd64 1.62.0.1 [3534 B] Get:178 http://127.0.0.1:9999/debian unstable/main amd64 libboost-type-erasure1.62.0 amd64 1.62.0+dfsg-4+b1 [42.9 kB] Get:179 http://127.0.0.1:9999/debian unstable/main amd64 libboost-type-erasure1.62-dev amd64 1.62.0+dfsg-4+b1 [42.0 kB] Get:180 http://127.0.0.1:9999/debian unstable/main amd64 libboost-type-erasure-dev amd64 1.62.0.1 [3508 B] Get:181 http://127.0.0.1:9999/debian unstable/main amd64 libboost-wave1.62.0 amd64 1.62.0+dfsg-4+b1 [204 kB] Get:182 http://127.0.0.1:9999/debian unstable/main amd64 libboost-wave1.62-dev amd64 1.62.0+dfsg-4+b1 [252 kB] Get:183 http://127.0.0.1:9999/debian unstable/main amd64 libboost-wave-dev amd64 1.62.0.1 [3448 B] Get:184 http://127.0.0.1:9999/debian unstable/main amd64 libboost-all-dev amd64 1.62.0.1 [3750 B] Get:185 http://127.0.0.1:9999/debian unstable/main amd64 liblapack3 amd64 3.7.1-1 [2141 kB] Get:186 http://127.0.0.1:9999/debian unstable/main amd64 libmetis5 amd64 5.1.0.dfsg-5+b2 [175 kB] Get:187 http://127.0.0.1:9999/debian unstable/main amd64 libmetis-dev amd64 5.1.0.dfsg-5+b2 [10.8 kB] Get:188 http://127.0.0.1:9999/debian unstable/main amd64 libscalapack-openmpi1 amd64 1.8.0-14 [2213 kB] Get:189 http://127.0.0.1:9999/debian unstable/main amd64 libmumps-5.1.1 amd64 5.1.1-2 [1115 kB] Get:190 http://127.0.0.1:9999/debian unstable/main amd64 libscalapack-mpi-dev amd64 1.8.0-14 [2208 kB] Get:191 http://127.0.0.1:9999/debian unstable/main amd64 libmumps-dev amd64 5.1.1-2 [999 kB] Get:192 http://127.0.0.1:9999/debian unstable/main amd64 libscotch-5.1 amd64 5.1.12b.dfsg-2.1 [304 kB] Get:193 http://127.0.0.1:9999/debian unstable/main amd64 libmumps-seq-5.1.1 amd64 5.1.1-2 [1132 kB] Get:194 http://127.0.0.1:9999/debian unstable/main amd64 libmumps-seq-dev amd64 5.1.1-2 [1000 kB] Get:195 http://127.0.0.1:9999/debian unstable/main amd64 libmuparser2v5 amd64 2.2.3-6 [113 kB] Get:196 http://127.0.0.1:9999/debian unstable/main amd64 libmuparser-dev amd64 2.2.3-6 [29.0 kB] Get:197 http://127.0.0.1:9999/debian unstable/main amd64 libpython-all-dev amd64 2.7.13-2 [960 B] Get:198 http://127.0.0.1:9999/debian unstable/main amd64 libqhull7 amd64 2015.2-2 [194 kB] Get:199 http://127.0.0.1:9999/debian unstable/main amd64 libqhull-dev amd64 2015.2-2 [291 kB] Get:200 http://127.0.0.1:9999/debian unstable/main amd64 libsuperlu5 amd64 5.2.1+dfsg1-2 [160 kB] Get:201 http://127.0.0.1:9999/debian unstable/main amd64 libsuperlu-dev amd64 5.2.1+dfsg1-2 [18.0 kB] Get:202 http://127.0.0.1:9999/debian unstable/main amd64 python-all amd64 2.7.13-2 [942 B] Get:203 http://127.0.0.1:9999/debian unstable/main amd64 python-all-dev amd64 2.7.13-2 [962 B] Get:204 http://127.0.0.1:9999/debian unstable/main amd64 python-decorator all 4.1.1-1 [13.5 kB] Get:205 http://127.0.0.1:9999/debian unstable/main amd64 python-numpy amd64 1:1.12.1-3+b2 [1936 kB] Get:206 http://127.0.0.1:9999/debian unstable/main amd64 python-scipy amd64 0.18.1-2+b1 [8979 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 196 MB in 2s (91.3 MB/s) Selecting previously unselected package groff-base. 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Unpacking python (2.7.13-2) ... Selecting previously unselected package libpython3.5-minimal:amd64. Preparing to unpack .../1-libpython3.5-minimal_3.5.4-2_amd64.deb ... Unpacking libpython3.5-minimal:amd64 (3.5.4-2) ... Selecting previously unselected package python3.5-minimal. Preparing to unpack .../2-python3.5-minimal_3.5.4-2_amd64.deb ... Unpacking python3.5-minimal (3.5.4-2) ... Selecting previously unselected package python3-minimal. Preparing to unpack .../3-python3-minimal_3.5.3-3_amd64.deb ... Unpacking python3-minimal (3.5.3-3) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../4-libmpdec2_2.4.2-1_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.2-1) ... Selecting previously unselected package libpython3.5-stdlib:amd64. Preparing to unpack .../5-libpython3.5-stdlib_3.5.4-2_amd64.deb ... Unpacking libpython3.5-stdlib:amd64 (3.5.4-2) ... Selecting previously unselected package python3.5. Preparing to unpack .../6-python3.5_3.5.4-2_amd64.deb ... 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Setting up libboost-type-erasure-dev:amd64 (1.62.0.1) ... Setting up libboost-timer-dev:amd64 (1.62.0.1) ... Setting up libboost-test1.62-dev:amd64 (1.62.0+dfsg-4+b1) ... Setting up libboost-log-dev (1.62.0.1) ... Setting up python-all-dev (2.7.13-2) ... Setting up libboost-wave-dev:amd64 (1.62.0.1) ... Setting up libopenmpi2:amd64 (2.1.1-6) ... Setting up libboost-test-dev:amd64 (1.62.0.1) ... Setting up libboost-mpi1.62.0 (1.62.0+dfsg-4+b1) ... Setting up libscotch-5.1 (5.1.12b.dfsg-2.1) ... Setting up libopenmpi-dev (2.1.1-6) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up libmumps-seq-5.1.1:amd64 (5.1.1-2) ... Setting up libboost-graph1.62-dev:amd64 (1.62.0+dfsg-4+b1) ... Setting up openmpi-bin (2.1.1-6) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode Setting up mpi-default-dev (1.8) ... Setting up libboost-graph-parallel1.62.0 (1.62.0+dfsg-4+b1) ... Setting up libboost-graph-parallel1.62-dev (1.62.0+dfsg-4+b1) ... Setting up libboost-mpi1.62-dev (1.62.0+dfsg-4+b1) ... Setting up mpi-default-bin (1.8) ... Setting up libblacs-openmpi1 (1.1-40) ... Setting up libboost-graph-dev:amd64 (1.62.0.1) ... Setting up libboost-graph-parallel-dev (1.62.0.1) ... Setting up libboost-mpi-dev (1.62.0.1) ... Setting up libblacs-mpi-dev (1.1-40) ... Setting up libscalapack-openmpi1 (1.8.0-14) ... Setting up libscalapack-mpi-dev (1.8.0-14) ... Setting up libmumps-5.1.1:amd64 (5.1.1-2) ... Setting up libmumps-dev:amd64 (5.1.1-2) ... Setting up libmumps-seq-dev:amd64 (5.1.1-2) ... Setting up dh-python (2.20170125) ... Setting up dh-autoreconf (14) ... Setting up python3 (3.5.3-3) ... Setting up python3-dev (3.5.3-3) ... Setting up dh-strip-nondeterminism (0.038-1) ... Setting up debhelper (10.7.2) ... Setting up libboost-mpi-python1.62.0 (1.62.0+dfsg-4+b1) ... Setting up libboost-python1.62-dev (1.62.0+dfsg-4+b1) ... Setting up libboost-python-dev (1.62.0.1) ... Setting up libboost-mpi-python1.62-dev (1.62.0+dfsg-4+b1) ... Setting up libboost-mpi-python-dev (1.62.0.1) ... Setting up libboost-all-dev (1.62.0.1) ... Setting up sbuild-build-depends-getfem++-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.24-14) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-2-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.29-4 dpkg-dev_1.18.24 g++-7_7.2.0-1 gcc-7_7.2.0-1 libc6-dev_2.24-14 libstdc++-6-dev_6.4.0-3 libstdc++-7-dev_7.2.0-1 libstdc++6_7.2.0-1 linux-libc-dev_4.12.6-1 Package versions: adduser_3.116 apt_1.5~beta2 autoconf_2.69-10 automake_1:1.15.1-2 autopoint_0.19.8.1-2 autotools-dev_20161112.1 base-files_10 base-passwd_3.5.43 bash_4.4-5 binutils_2.29-4 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-4 build-essential_12.3 bzip2_1.0.6-8.1 clang-5.0_1:5.0~+rc2-1 coreutils_8.26-3 cpp_4:7.1.0-2 cpp-7_7.2.0-1 dash_0.5.8-2.5 debconf_1.5.63 debfoster_2.7-2.1+b1 debhelper_10.7.2 debian-archive-keyring_2017.5 debianutils_4.8.2 dh-autoreconf_14 dh-python_2.20170125 dh-strip-nondeterminism_0.038-1 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libsuperlu-dev_5.2.1+dfsg1-2 libsuperlu5_5.2.1+dfsg1-2 libsystemd0_234-2 libtasn1-6_4.12-2.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20170715-2 libtool_2.4.6-2 libtsan0_7.2.0-1 libubsan0_7.2.0-1 libudev1_234-2 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-4 libxml2_2.9.4+dfsg1-3 linux-libc-dev_4.12.6-1 login_1:4.4-4.1 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17+b3 mime-support_3.60 mount_2.29.2-4 mpi-default-bin_1.8 mpi-default-dev_1.8 multiarch-support_2.24-14 ncurses-base_6.0+20170715-2 ncurses-bin_6.0+20170715-2 ocl-icd-libopencl1_2.2.11-1 openmpi-bin_2.1.1-6 openmpi-common_2.1.1-6 passwd_1:4.4-4.1 patch_2.7.5-1+b2 perl_5.26.0-5 perl-base_5.26.0-5 perl-modules-5.26_5.26.0-5 po-debconf_1.0.20 python_2.7.13-2 python-all_2.7.13-2 python-all-dev_2.7.13-2 python-decorator_4.1.1-1 python-dev_2.7.13-2 python-minimal_2.7.13-2 python-numpy_1:1.12.1-3+b2 python-scipy_0.18.1-2+b1 python2.7_2.7.13-4 python2.7-dev_2.7.13-4 python2.7-minimal_2.7.13-4 python3_3.5.3-3 python3-dev_3.5.3-3 python3-minimal_3.5.3-3 python3.5_3.5.4-2 python3.5-dev_3.5.4-2 python3.5-minimal_3.5.4-2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-getfem++-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 sysvinit-utils_2.88dsf-59.9 tar_1.29b-2 util-linux_2.29.2-4 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Aug 16 19:19:04 2017 UTC gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./getfem++_5.2+dfsg1-4.dsc dpkg-source: info: extracting getfem++ in /build/getfem++-7J40nX/getfem++-5.2+dfsg1 dpkg-source: info: unpacking getfem++_5.2+dfsg1.orig.tar.xz dpkg-source: info: unpacking getfem++_5.2+dfsg1-4.debian.tar.xz dpkg-source: info: applying 04_fix_FTBFS.patch dpkg-source: info: applying 05_disable_failing_test.patch dpkg-source: info: applying 06_gcc-6.patch dpkg-source: info: applying 07_disable_scilab.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-c343bdf3-b362-4b1b-bf15-8d029b6ab4de SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package getfem++ dpkg-buildpackage: info: source version 5.2+dfsg1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Anton Gladky dpkg-source --before-build getfem++-5.2+dfsg1 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python2 dh_auto_clean dh_autoreconf_clean dh_clean debian/rules build-arch dh build-arch --with python2 dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:96: installing './compile' configure.ac:57: installing './missing' contrib/aposteriori/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' interface/src/python/Makefile.am:25: installing './py-compile' tests/Makefile.am:101: warning: variable 'test_gmm_matrix_functions_SOURCES' is defined but no program or tests/Makefile.am:101: library has 'test_gmm_matrix_functions' as canonical name (possible typo) debian/rules override_dh_auto_configure make[1]: Entering directory '/build/getfem++-7J40nX/getfem++-5.2+dfsg1' dh_auto_configure -- --prefix=/usr --enable-boost --enable-shared --with-pic --enable-python --enable-metis --disable-matlab --disable-superlu --enable-muparser --enable-mumps --disable-scilab --with-mumps="-lsmumps_seq -ldmumps_seq -lcmumps_seq -lzmumps_seq -lpord_seq" ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --prefix=/usr --enable-boost --enable-shared --with-pic --enable-python --enable-metis --disable-matlab --disable-superlu --enable-muparser --enable-mumps --disable-scilab "--with-mumps=-lsmumps_seq -ldmumps_seq -lcmumps_seq -lzmumps_seq -lpord_seq" configure: WARNING: unrecognized options: --disable-maintainer-mode, --enable-muparser, --disable-scilab checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for style of include used by make... GNU checking whether to compile using MPI... no checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking whether to compile using MPI... no checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking whether to compile using MPI... no checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking how to run the C++ preprocessor... g++ -E checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lm -lquadmath checking whether the compiler recognizes the partial specialization syntax... yes you are compiling GetFEM++ on a x86_64-pc-linux-gnu Using the GNU g++ compiler 5.0.0-+rc2-1 checking whether g++ accepts -O3... no checking whether g++ accepts -Wall -W... no checking whether g++ accepts -fmessage-length=0... no checking whether g++ accepts -fvisibility-inlines-hidden... no checking whether g++ accepts -ftemplate-depth-100... no checking whether g++ accepts -std=c++11... no checking whether g++ accepts -std=c++0x... no configure: error: g++ do not support option -std=c++11. Update g++ to at least release 4.8.1. tail -v -n \+0 config.log ==> config.log <== This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by getfem configure 5.2, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=${prefix}/lib/x86_64-linux-gnu --libexecdir=${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --prefix=/usr --enable-boost --enable-shared --with-pic --enable-python --enable-metis --disable-matlab --disable-superlu --enable-muparser --enable-mumps --disable-scilab --with-mumps=-lsmumps_seq -ldmumps_seq -lcmumps_seq -lzmumps_seq -lpord_seq ## --------- ## ## Platform. ## ## --------- ## hostname = ip-172-31-45-151 uname -m = x86_64 uname -r = 4.9.0-2-amd64 uname -s = Linux uname -v = #1 SMP Debian 4.9.18-1 (2017-03-30) /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /usr/games ## ----------- ## ## Core tests. ## ## ----------- ## configure:2790: checking for a BSD-compatible install configure:2858: result: /usr/bin/install -c configure:2869: checking whether build environment is sane configure:2924: result: yes configure:3065: checking for a thread-safe mkdir -p configure:3104: result: /bin/mkdir -p configure:3111: checking for gawk configure:3141: result: no configure:3111: checking for mawk configure:3127: found /usr/bin/mawk configure:3138: result: mawk configure:3149: checking whether make sets $(MAKE) configure:3171: result: yes configure:3200: checking whether make supports nested variables configure:3217: result: yes configure:3390: checking for style of include used by make configure:3418: result: GNU configure:3444: checking whether to compile using MPI configure:3451: result: no configure:3618: checking for g++ configure:3634: found /usr/bin/g++ configure:3645: result: g++ configure:3672: checking for C++ compiler version configure:3681: g++ --version >&5 clang version 5.0.0-+rc2-1 (tags/RELEASE_500/rc2) Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin configure:3692: $? = 0 configure:3681: g++ -v >&5 clang version 5.0.0-+rc2-1 (tags/RELEASE_500/rc2) Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/6 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/6.4.0 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/7 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.2.0 Found candidate GCC installation: /usr/lib/gcc/x86_64-linux-gnu/6 Found candidate GCC installation: /usr/lib/gcc/x86_64-linux-gnu/6.4.0 ... rest of stderr output deleted ... configure:3692: $? = 0 configure:3681: g++ -V >&5 clang: error: argument to '-V' is missing (expected 1 value) clang: error: no input files configure:3692: $? = 1 configure:3681: g++ -qversion >&5 clang: error: unknown argument: '-qversion' clang: error: no input files configure:3692: $? = 1 configure:3712: checking whether the C++ compiler works configure:3734: g++ -Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.cpp >&5 configure:3738: $? = 0 configure:3786: result: yes configure:3789: checking for C++ compiler default output file name configure:3791: result: a.out configure:3797: checking for suffix of executables configure:3804: g++ -o conftest -Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.cpp >&5 configure:3808: $? = 0 configure:3830: result: configure:3852: checking whether we are cross compiling configure:3860: g++ -o conftest -Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.cpp >&5 configure:3864: $? = 0 configure:3871: ./conftest configure:3875: $? = 0 configure:3890: result: no configure:3895: checking for suffix of object files configure:3917: g++ -c -Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:3921: $? = 0 configure:3942: result: o configure:3946: checking whether we are using the GNU C++ compiler configure:3965: g++ -c -Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:3965: $? = 0 configure:3974: result: yes configure:3983: checking whether g++ accepts -g configure:4003: g++ -c -g -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:4003: $? = 0 configure:4044: result: yes configure:4069: checking dependency style of g++ configure:4180: result: none configure:4315: checking whether to compile using MPI configure:4322: result: no configure:4485: checking for gcc configure:4501: found /usr/bin/gcc configure:4512: result: gcc configure:4543: checking for C compiler version configure:4552: gcc --version >&5 clang version 5.0.0-+rc2-1 (tags/RELEASE_500/rc2) Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin configure:4563: $? = 0 configure:4552: gcc -v >&5 clang version 5.0.0-+rc2-1 (tags/RELEASE_500/rc2) Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/6 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/6.4.0 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/7 Found candidate GCC installation: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.2.0 Found candidate GCC installation: /usr/lib/gcc/x86_64-linux-gnu/6 Found candidate GCC installation: /usr/lib/gcc/x86_64-linux-gnu/6.4.0 ... rest of stderr output deleted ... configure:4563: $? = 0 configure:4552: gcc -V >&5 clang: error: argument to '-V' is missing (expected 1 value) clang: error: no input files configure:4563: $? = 1 configure:4552: gcc -qversion >&5 clang: error: unknown argument: '-qversion' clang: error: no input files configure:4563: $? = 1 configure:4567: checking whether we are using the GNU C compiler configure:4586: gcc -c -Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:4586: $? = 0 configure:4595: result: yes configure:4604: checking whether gcc accepts -g configure:4624: gcc -c -g -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:4624: $? = 0 configure:4665: result: yes configure:4682: checking for gcc option to accept ISO C89 configure:4745: gcc -c -Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:4745: $? = 0 configure:4758: result: none needed configure:4783: checking whether gcc understands -c and -o together configure:4805: gcc -c conftest.c -o conftest2.o configure:4808: $? = 0 configure:4805: gcc -c conftest.c -o conftest2.o configure:4808: $? = 0 configure:4820: result: yes configure:4839: checking dependency style of gcc configure:4950: result: none configure:5088: checking whether to compile using MPI configure:5095: result: no configure:5257: checking for gfortran configure:5273: found /usr/bin/gfortran configure:5284: result: gfortran configure:5310: checking for Fortran compiler version configure:5319: gfortran --version >&5 GNU Fortran (Debian 7.2.0-1) 7.2.0 Copyright (C) 2017 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5330: $? = 0 configure:5319: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/7/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 7.2.0-1' --with-bugurl=file:///usr/share/doc/gcc-7/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --prefix=/usr --with-gcc-major-version-only --program-suffix=-7 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --enable-default-pie --with-system-zlib --with-target-system-zlib --enable-objc-gc=auto --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 7.2.0 (Debian 7.2.0-1) configure:5330: $? = 0 configure:5319: gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:5330: $? = 1 configure:5319: gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'? gfortran: fatal error: no input files compilation terminated. configure:5330: $? = 1 configure:5339: checking whether we are using the GNU Fortran compiler configure:5352: gfortran -c -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong conftest.F >&5 configure:5352: $? = 0 configure:5361: result: yes configure:5367: checking whether gfortran accepts -g configure:5378: gfortran -c -g conftest.f >&5 configure:5378: $? = 0 configure:5386: result: yes configure:5570: checking how to run the C++ preprocessor configure:5597: g++ -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp configure:5597: $? = 0 configure:5611: g++ -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp conftest.cpp:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^~~~~~~~~~~~~~~~~~ 1 error generated. configure:5611: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "getfem" | #define PACKAGE_TARNAME "getfem" | #define PACKAGE_VERSION "5.2" | #define PACKAGE_STRING "getfem 5.2" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "getfem" | #define VERSION "5.2" | /* end confdefs.h. */ | #include configure:5636: result: g++ -E configure:5656: g++ -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp configure:5656: $? = 0 configure:5670: g++ -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp conftest.cpp:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^~~~~~~~~~~~~~~~~~ 1 error generated. configure:5670: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "getfem" | #define PACKAGE_TARNAME "getfem" | #define PACKAGE_VERSION "5.2" | #define PACKAGE_STRING "getfem 5.2" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "getfem" | #define VERSION "5.2" | /* end confdefs.h. */ | #include configure:5705: checking build system type configure:5719: result: x86_64-pc-linux-gnu configure:5739: checking host system type configure:5752: result: x86_64-pc-linux-gnu configure:5776: checking how to get verbose linking output from gfortran configure:5786: gfortran -c -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong conftest.f >&5 configure:5786: $? = 0 configure:5804: gfortran -o conftest -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -v -Wl,-z,relro -Wl,-z,now conftest.f Using built-in specs. Target: x86_64-linux-gnu Thread model: posix gcc version 7.2.0 (Debian 7.2.0-1) /usr/lib/gcc/x86_64-linux-gnu/7/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/7/finclude -o /tmp/ccvmeuAZ.s GNU Fortran (Debian 7.2.0-1) version 7.2.0 (x86_64-linux-gnu) compiled by GNU C version 7.2.0, GMP version 6.1.2, MPFR version 3.1.5, MPC version 1.0.3, isl version isl-0.18-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (Debian 7.2.0-1) version 7.2.0 (x86_64-linux-gnu) compiled by GNU C version 7.2.0, GMP version 6.1.2, MPFR version 3.1.5, MPC version 1.0.3, isl version isl-0.18-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/cc0GdqNH.o /tmp/ccvmeuAZ.s GNU assembler version 2.29 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.29 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/7/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/7/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/7/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/7/lto-wrapper -plugin-opt=-fresolution=/tmp/ccv8XW0p.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -o conftest /usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/7/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -z relro -z now /tmp/cc0GdqNH.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu/crtn.o configure:5887: result: -v configure:5889: checking for Fortran libraries of gfortran configure:5912: gfortran -o conftest -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -v -Wl,-z,relro -Wl,-z,now conftest.f Using built-in specs. Target: x86_64-linux-gnu Thread model: posix gcc version 7.2.0 (Debian 7.2.0-1) /usr/lib/gcc/x86_64-linux-gnu/7/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/7/finclude -o /tmp/ccFCC4Q5.s GNU Fortran (Debian 7.2.0-1) version 7.2.0 (x86_64-linux-gnu) compiled by GNU C version 7.2.0, GMP version 6.1.2, MPFR version 3.1.5, MPC version 1.0.3, isl version isl-0.18-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (Debian 7.2.0-1) version 7.2.0 (x86_64-linux-gnu) compiled by GNU C version 7.2.0, GMP version 6.1.2, MPFR version 3.1.5, MPC version 1.0.3, isl version isl-0.18-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/ccMdK5aO.o /tmp/ccFCC4Q5.s GNU assembler version 2.29 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.29 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/7/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/7/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/7/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/7/lto-wrapper -plugin-opt=-fresolution=/tmp/ccowqJvw.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -o conftest /usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/7/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -z relro -z now /tmp/ccMdK5aO.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu/crtn.o configure:6108: result: -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lm -lquadmath configure:6133: checking whether the compiler recognizes the partial specialization syntax configure:6159: g++ -c -Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:6159: $? = 0 configure:6173: result: yes configure:6189: checking whether g++ accepts -O3 configure:6202: checking whether g++ accepts -Wall -W configure:6215: checking whether g++ accepts -fmessage-length=0 configure:6228: checking whether g++ accepts -fvisibility-inlines-hidden configure:6241: checking whether g++ accepts -ftemplate-depth-100 configure:6254: checking whether g++ accepts -std=c++11 configure:6263: checking whether g++ accepts -std=c++0x configure:6272: error: g++ do not support option -std=c++11. Update g++ to at least release 4.8.1. ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_cxx_partial_specialization_syntax=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security' ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value='-Wdate-time -D_FORTIFY_SOURCE=2' ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set=set ac_cv_env_CXXFLAGS_value='-Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security' ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_FCFLAGS_set=set ac_cv_env_FCFLAGS_value='-g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong' ac_cv_env_FC_set= ac_cv_env_FC_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-Wl,-z,relro -Wl,-z,now' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_MPICC_set= ac_cv_env_MPICC_value= ac_cv_env_MPICXX_set= ac_cv_env_MPICXX_value= ac_cv_env_MPIFC_set= ac_cv_env_MPIFC_value= ac_cv_env_PYTHON_VERSION_set= ac_cv_env_PYTHON_VERSION_value= ac_cv_env_PYTHON_set= ac_cv_env_PYTHON_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=x86_64-linux-gnu ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_fc_compiler_gnu=yes ac_cv_fc_libs=' -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lm -lquadmath' ac_cv_host=x86_64-pc-linux-gnu ac_cv_objext=o ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AWK=mawk ac_cv_prog_CXXCPP='g++ -E' ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_CXX=g++ ac_cv_prog_ac_ct_FC=gfortran ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ac_cv_prog_make_make_set=yes am_cv_CC_dependencies_compiler_type=none am_cv_CXX_dependencies_compiler_type=none am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /build/getfem++-7J40nX/getfem++-5.2+dfsg1/missing aclocal-1.15' AMDEPBACKSLASH='' AMDEP_FALSE='' AMDEP_TRUE='#' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_CXXFLAGS='' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='' AUTOCONF='${SHELL} /build/getfem++-7J40nX/getfem++-5.2+dfsg1/missing autoconf' AUTOHEADER='${SHELL} /build/getfem++-7J40nX/getfem++-5.2+dfsg1/missing autoheader' AUTOMAKE='${SHELL} /build/getfem++-7J40nX/getfem++-5.2+dfsg1/missing automake-1.15' AWK='mawk' BLAS_LIBS='' BOOST_CPPFLAGS='' BOOST_LDFLAGS='' BOOST_LIBS='' BOOST_SYSTEM_LIB='' BOOST_THREAD_LIB='' BUILDDATE='' BUILDER='' BUILDMEXRPC_FALSE='' BUILDMEXRPC_TRUE='' BUILDMEX_FALSE='' BUILDMEX_TRUE='' BUILDPYTHONPAR_FALSE='' BUILDPYTHONPAR_TRUE='' BUILDPYTHON_FALSE='' BUILDPYTHON_TRUE='' CC='gcc' CCDEPMODE='depmode=none' CFLAGS='-Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security' CONFIGURE_ARGS='' CPP='' CPPFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2' CXX='g++' CXXCPP='g++ -E' CXXDEPMODE='depmode=none' CXXFLAGS='-Wall -g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' DISTCLEANMESH='' DLLTOOL='' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='' EXEEXT='' FC='gfortran' FCFLAGS='-g -O2 -fdebug-prefix-map=/build/getfem++-7J40nX/getfem++-5.2+dfsg1=. -fstack-protector-strong' FCLIBS=' -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/7/../../.. -lgfortran -lm -lquadmath' FGREP='' GETFEM_SERVER='' GFSERVERFLAGS='' GREP='' IM_METHODS='' IM_METHODS_LOC='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='' LDFLAGS='-Wl,-z,relro -Wl,-z,now' LIBOBJS='' LIBS='' LIBTOOL='' LIBTOOL_DEPS='' LIBTOOL_VERSION_INFO='' LIPO='' LN_S='' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAKEINFO='${SHELL} /build/getfem++-7J40nX/getfem++-5.2+dfsg1/missing makeinfo' MANIFEST_TOOL='' MATLAB_COM_EXT='' MATLAB_INC_DIR='' MATLAB_OBJ_DIRS='' MATLAB_RELEASE='' MATLAB_ROOT='' METIS_FALSE='' METIS_LIBS='' METIS_TRUE='' MEX='' MKDIR_P='/bin/mkdir -p' MPICC='' MPICXX='' MPIFC='' MUMPS_FALSE='' MUMPS_LIBS='' MUMPS_TRUE='' NM='' NMEDIT='' OBJDUMP='' OBJEXT='o' OPENMP_CXXFLAGS='' OTOOL64='' OTOOL='' PACKAGE='getfem' PACKAGE_BUGREPORT='' PACKAGE_NAME='getfem' PACKAGE_STRING='getfem 5.2' PACKAGE_TARNAME='getfem' PACKAGE_URL='' PACKAGE_VERSION='5.2' PATH_SEPARATOR=':' PSEUDO_FUNCTIONS='' PSEUDO_FUNCTIONS_LOC='' PYTHON='' PYTHON_CC_ARG='' PYTHON_CPPFLAGS='' PYTHON_EXEC_PREFIX='' PYTHON_EXTRA_EXT_PARAM='' PYTHON_EXTRA_LDFLAGS='' PYTHON_EXTRA_LIBS='' PYTHON_LDFLAGS='' PYTHON_PLATFORM='' PYTHON_PREFIX='' PYTHON_SITE_PKG='' PYTHON_VERSION='' QHULL_FALSE='' QHULL_LIBS='' QHULL_TRUE='' RANLIB='' RPC_INC_DIR='' RPC_LIB='' SED='' SET_MAKE='' SHELL='/bin/bash' STDCPP_STATICLIBS='' STRIP='' SUPERLU_CPPFLAGS='' SUPERLU_LIBS='' SUPERLU_SRC='' SUPLDFLAGS='' TOOLBOXDIR='' USEBLASLITE_FALSE='' USEBLASLITE_TRUE='' USE_MINGW_MEX_FALSE='' USE_MINGW_MEX_TRUE='' VERSION='5.2' ac_ct_AR='' ac_ct_CC='gcc' ac_ct_CXX='g++' ac_ct_DUMPBIN='' ac_ct_FC='gfortran' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='#' am__fastdepCXX_FALSE='' am__fastdepCXX_TRUE='#' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='x86_64-linux-gnu' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${prefix}/share/info' install_sh='${SHELL} /build/getfem++-7J40nX/getfem++-5.2+dfsg1/install-sh' libdir='${prefix}/lib/x86_64-linux-gnu' libexecdir='${prefix}/lib/x86_64-linux-gnu' localedir='${datarootdir}/locale' localstatedir='/var' mandir='${prefix}/share/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' pkgpyexecdir='' pkgpythondir='' prefix='/usr' program_transform_name='s,x,x,' psdir='${docdir}' pyexecdir='' pythondir='' runstatedir='${localstatedir}/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "getfem" #define PACKAGE_TARNAME "getfem" #define PACKAGE_VERSION "5.2" #define PACKAGE_STRING "getfem 5.2" #define PACKAGE_BUGREPORT "" #define PACKAGE_URL "" #define PACKAGE "getfem" #define VERSION "5.2" configure: exit 1 dh_auto_configure: ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --prefix=/usr --enable-boost --enable-shared --with-pic --enable-python --enable-metis --disable-matlab --disable-superlu --enable-muparser --enable-mumps --disable-scilab "--with-mumps=-lsmumps_seq -ldmumps_seq -lcmumps_seq -lzmumps_seq -lpord_seq" returned exit code 1 debian/rules:26: recipe for target 'override_dh_auto_configure' failed make[1]: *** [override_dh_auto_configure] Error 2 make[1]: Leaving directory '/build/getfem++-7J40nX/getfem++-5.2+dfsg1' debian/rules:3: recipe for target 'build-arch' failed make: *** [build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 2017-08-20T17:29:14Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /build/getfem++-7J40nX Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 38456 Build-Time: 12 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 32 Job: getfem++_5.2+dfsg1-4 Machine Architecture: amd64 Package: getfem++ Package-Time: 68 Source-Version: 5.2+dfsg1-4 Space: 38456 Status: attempted Version: 5.2+dfsg1-4 -------------------------------------------------------------------------------- Finished at 2017-08-20T17:29:14Z Build needed 00:01:08, 38456k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 69.142099828s DC-Time-Estimation: 69.142099828 versus expected 1953 (r/m: 27.246177146172048 ; m: 69.142099828)