DC-Build-Header: cmtk 3.3.1-1.2 / 2018-05-02 13:00:49 +0000 DC-Task: type:rebuild-binarch-only source:cmtk version:3.3.1-1.2 chroot:unstable esttime:157 logfile:/tmp/cmtk_3.3.1-1.2_unstable_clang60.log modes:clang60:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang60 cmtk_3.3.1-1.2' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-6-203.eu-central-1.compute.internal +==============================================================================+ | cmtk 3.3.1-1.2 (amd64) Wed, 02 May 2018 13:00:49 +0000 | +==============================================================================+ Package: cmtk Version: 3.3.1-1.2 Source Version: 3.3.1-1.2 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-67175a6b-db93-43e9-ad73-e878981347e9' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang60 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=6.0 + echo 'Install of clang-6.0' Install of clang-6.0 + apt-get update Get:1 http://127.0.0.1:9999/debian unstable InRelease [242 kB] Get:2 http://127.0.0.1:9999/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Sources 2018-05-02-0830.09.pdiff [16.2 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Sources 2018-05-02-0830.09.pdiff [16.2 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2018-05-02-0830.09.pdiff [1781 B] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2018-05-02-0830.09.pdiff [1781 B] Get:6 http://127.0.0.1:9999/debian unstable/main Translation-en [6016 kB] Fetched 6332 kB in 2s (3405 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-6.0 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-6.0-doc Recommended packages: llvm-6.0-dev python libomp-dev libgpm2 The following NEW packages will be installed: clang-6.0 lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. Need to get 37.7 MB of archives. After this operation, 187 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.7-1 [92.1 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5 amd64 6.1+20180210-2 [95.7 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20170329-1 [85.2 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libllvm6.0 amd64 1:6.0-3 [14.5 MB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 8-20180425-1 [52.4 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-7-dev amd64 7.3.0-17 [204 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libc6-i386 amd64 2.27-3 [2855 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 lib32gcc1 amd64 1:8-20180425-1 [47.8 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 lib32stdc++6 amd64 8-20180425-1 [406 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-6.0-dev amd64 1:6.0-3 [3102 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-6.0 amd64 1:6.0-3 [6995 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 clang-6.0 amd64 1:6.0-3 [9175 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 37.7 MB in 0s (98.7 MB/s) Selecting previously unselected package libjsoncpp1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10022 files and directories currently installed.) Preparing to unpack .../00-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../01-libbsd0_0.8.7-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.7-1) ... Selecting previously unselected package libncurses5:amd64. Preparing to unpack .../02-libncurses5_6.1+20180210-2_amd64.deb ... Unpacking libncurses5:amd64 (6.1+20180210-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../03-libedit2_3.1-20170329-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20170329-1) ... Selecting previously unselected package libllvm6.0:amd64. Preparing to unpack .../04-libllvm6.0_1%3a6.0-3_amd64.deb ... Unpacking libllvm6.0:amd64 (1:6.0-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../05-libobjc4_8-20180425-1_amd64.deb ... Unpacking libobjc4:amd64 (8-20180425-1) ... Selecting previously unselected package libobjc-7-dev:amd64. Preparing to unpack .../06-libobjc-7-dev_7.3.0-17_amd64.deb ... Unpacking libobjc-7-dev:amd64 (7.3.0-17) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../07-libc6-i386_2.27-3_amd64.deb ... Unpacking libc6-i386 (2.27-3) ... Selecting previously unselected package lib32gcc1. Preparing to unpack .../08-lib32gcc1_1%3a8-20180425-1_amd64.deb ... Unpacking lib32gcc1 (1:8-20180425-1) ... Selecting previously unselected package lib32stdc++6. Preparing to unpack .../09-lib32stdc++6_8-20180425-1_amd64.deb ... Unpacking lib32stdc++6 (8-20180425-1) ... Selecting previously unselected package libclang-common-6.0-dev. Preparing to unpack .../10-libclang-common-6.0-dev_1%3a6.0-3_amd64.deb ... Unpacking libclang-common-6.0-dev (1:6.0-3) ... Selecting previously unselected package libclang1-6.0:amd64. Preparing to unpack .../11-libclang1-6.0_1%3a6.0-3_amd64.deb ... Unpacking libclang1-6.0:amd64 (1:6.0-3) ... Selecting previously unselected package clang-6.0. Preparing to unpack .../12-clang-6.0_1%3a6.0-3_amd64.deb ... Unpacking clang-6.0 (1:6.0-3) ... Setting up libncurses5:amd64 (6.1+20180210-2) ... Setting up libobjc4:amd64 (8-20180425-1) ... Setting up libc6-i386 (2.27-3) ... Setting up libbsd0:amd64 (0.8.7-1) ... Setting up libobjc-7-dev:amd64 (7.3.0-17) ... Processing triggers for libc-bin (2.27-3) ... Setting up lib32gcc1 (1:8-20180425-1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libllvm6.0:amd64 (1:6.0-3) ... Setting up libclang1-6.0:amd64 (1:6.0-3) ... Setting up lib32stdc++6 (8-20180425-1) ... Setting up libclang-common-6.0-dev (1:6.0-3) ... Setting up clang-6.0 (1:6.0-3) ... Processing triggers for libc-bin (2.27-3) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-6.0 g++-4.6 + ln -s clang-6.0 gcc-4.6 + ln -s clang-6.0 cpp-4.6 + ln -s clang-6.0 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-6.0 g++-4.7 + ln -s clang-6.0 gcc-4.7 + ln -s clang-6.0 cpp-4.7 + ln -s clang-6.0 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-6.0 g++-4.8 + ln -s clang-6.0 gcc-4.8 + ln -s clang-6.0 cpp-4.8 + ln -s clang-6.0 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-6.0 g++-4.9 + ln -s clang-6.0 gcc-4.9 + ln -s clang-6.0 cpp-4.9 + ln -s clang-6.0 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-6.0 g++-5 + ln -s clang-6.0 gcc-5 + ln -s clang-6.0 cpp-5 + ln -s clang-6.0 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-6.0 g++-6 + ln -s clang-6.0 gcc-6 + ln -s clang-6.0 cpp-6 + ln -s clang-6.0 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-6.0 g++-7 + ln -s clang-6.0 gcc-7 + ln -s clang-6.0 cpp-7 + ln -s clang-6.0 gcc + echo 'gcc-7 hold' + dpkg --set-selections + echo 'g++-7 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-6.0 g++-8 + ln -s clang-6.0 gcc-8 + ln -s clang-6.0 cpp-8 + ln -s clang-6.0 gcc + echo 'gcc-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + cd - /build/cmtk-FSQISp + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang60'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'cmtk' packaging is maintained in the 'Git' version control system at: git://git.debian.org/pkg-exppsy/cmtk.git Please use: git clone git://git.debian.org/pkg-exppsy/cmtk.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1568 kB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main cmtk 3.3.1-1.2 (dsc) [2236 B] Get:2 http://127.0.0.1:9999/debian unstable/main cmtk 3.3.1-1.2 (tar) [1556 kB] Get:3 http://127.0.0.1:9999/debian unstable/main cmtk 3.3.1-1.2 (diff) [9768 B] Fetched 1568 kB in 0s (10.9 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/cmtk-FSQISp/cmtk-3.3.1' with '<>' I: NOTICE: Log filtering will replace 'build/cmtk-FSQISp' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-exQthq/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-exQthq/apt_archive ./ InRelease Get:2 copy:/<>/resolver-exQthq/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-exQthq/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-exQthq/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-exQthq/apt_archive ./ Packages [435 B] Fetched 1741 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-exQthq/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10771 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 7.0.50~), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev | libz-dev, libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libqt4-dev, qt4-qmake, libpng-dev, libtiff-dev | libtiff4-dev, libwrap0-dev, libcharls-dev | libdcmtk1-dev | libdcmtk2-dev (<< 3.6.0-8~), libxml2-dev, libssl-dev, xvfb, bc, dc, xauth Filtered Build-Depends: debhelper (>= 7.0.50~), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev, libdcmtk-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libqt4-dev, qt4-qmake, libpng-dev, libtiff-dev, libwrap0-dev, libcharls-dev, libxml2-dev, libssl-dev, xvfb, bc, dc, xauth dpkg-deb: building package 'sbuild-build-depends-cmtk-dummy' in '/<>/resolver-exQthq/apt_archive/sbuild-build-depends-cmtk-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-cmtk-dummy sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-exQthq/apt_archive ./ InRelease Get:2 copy:/<>/resolver-exQthq/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-exQthq/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-exQthq/apt_archive ./ Sources [623 B] Get:5 copy:/<>/resolver-exQthq/apt_archive ./ Packages [669 B] Fetched 2255 B in 0s (0 B/s) Reading package lists... Reading package lists... Install cmtk build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bc bsdmainutils cmake cmake-data dc debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libaudio2 libbz2-dev libcharls-dev libcharls1 libcroco3 libcurl3 libdbus-1-3 libdcmtk-dev libdcmtk12 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libelf1 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgssapi-krb5-2 libice6 libicu-dev libicu57 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 libldap-2.4-2 libldap-common libllvm5.0 liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libmng1 libmxml-dev libmxml1 libnghttp2-14 libpciaccess0 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libprocps6 libpsl5 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtdbus4 libqtgui4 libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsensors4 libsigsegv2 libsm6 libsqlite3-0 libsqlite3-dev libssh2-1 libssl-dev libssl1.0.2 libssl1.1 libtiff-dev libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libuv1 libwrap0 libwrap0-dev libx11-6 libx11-data libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxfont2 libxkbfile1 libxml2 libxml2-dev libxmu6 libxmuu1 libxpm4 libxrender1 libxshmfence1 libxt6 libxxf86vm1 lsb-base m4 man-db po-debconf procps qdbus qt4-linguist-tools qt4-qmake qtchooser qtcore4-l10n readline-common ucf x11-common x11-xkb-utils xauth xkb-data xserver-common xvfb zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff lrzip nas dcmtk-doc libfftw3-doc krb5-doc krb5-user icu-doc liblcms2-utils liblzma-doc pciutils libqt4-declarative-folderlistmodel libqt4-declarative-gestures libqt4-declarative-particles libqt4-declarative-shaders qt4-qmlviewer default-libmysqlclient-dev firebird-dev libpq-dev libsqlite0-dev qt4-dev-tools qt4-doc unixodbc-dev libthai0 qt4-qtconfig lm-sensors sqlite3-doc libtool-doc gfortran | fortran95-compiler gcj-jdk pkg-config m4-doc apparmor less www-browser libmail-box-perl readline-doc Recommended packages: curl | wget | lynx bzip2-doc ca-certificates dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libmxml-bin libpng-tools publicsuffix libqt4-opengl-dev libqt4-sql-mysql | libqt4-sql-odbc | libqt4-sql-psql | libqt4-sql-sqlite | libqt4-sql-sqlite2 | libqt4-sql-ibase libcups2 qt-at-spi libsasl2-modules libssl-doc pkg-config libltdl-dev libmail-sendmail-perl psmisc xfonts-base The following NEW packages will be installed: autoconf automake autopoint autotools-dev bc bsdmainutils cmake cmake-data dc debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libaudio2 libbz2-dev libcharls-dev libcharls1 libcroco3 libcurl3 libdbus-1-3 libdcmtk-dev libdcmtk12 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libelf1 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgssapi-krb5-2 libice6 libicu-dev libicu57 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 libldap-2.4-2 libldap-common libllvm5.0 liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libmng1 libmxml-dev libmxml1 libnghttp2-14 libpciaccess0 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libprocps6 libpsl5 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtdbus4 libqtgui4 libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsensors4 libsigsegv2 libsm6 libsqlite3-0 libsqlite3-dev libssh2-1 libssl-dev libssl1.0.2 libssl1.1 libtiff-dev libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libuv1 libwrap0 libwrap0-dev libx11-6 libx11-data libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxfont2 libxkbfile1 libxml2 libxml2-dev libxmu6 libxmuu1 libxpm4 libxrender1 libxshmfence1 libxt6 libxxf86vm1 lsb-base m4 man-db po-debconf procps qdbus qt4-linguist-tools qt4-qmake qtchooser qtcore4-l10n readline-common sbuild-build-depends-cmtk-dummy ucf x11-common x11-xkb-utils xauth xkb-data xserver-common xvfb zlib1g-dev 0 upgraded, 177 newly installed, 0 to remove and 0 not upgraded. Need to get 118 MB of archives. After this operation, 587 MB of additional disk space will be used. Get:1 copy:/<>/resolver-exQthq/apt_archive ./ sbuild-build-depends-cmtk-dummy 0.invalid.0 [960 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 11.1.2 [190 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-10 [1176 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.5.0-1 [29.0 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.8.3-2 [1180 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libprocps6 amd64 2:3.3.14-1 [60.4 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 lsb-base all 9.20170808 [28.1 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 procps amd64 2:3.3.14-1 [257 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 7.0-3 [70.4 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.33-2 [234 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.33-2 [113 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.33-2 [65.6 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-6 [122 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 ucf all 3.0038 [67.8 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-3.1 [736 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-6 [434 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 libreadline7 amd64 7.0-3+b1 [151 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 bc amd64 1.07.1-2 [109 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 cmake-data all 3.11.1-1 [1386 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 liblzo2-2 amd64 2.08-1.2+b2 [55.0 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-9 [7698 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-6.1 [725 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 libarchive13 amd64 3.2.2-3.1 [296 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 libkeyutils1 amd64 1.5.9-9.2 [12.9 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5support0 amd64 1.16-2 [62.8 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 libk5crypto3 amd64 1.16-2 [121 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5-3 amd64 1.16-2 [316 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.16-2 [158 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27~101-g0780600+dfsg-3.1 [68.6 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 libsasl2-2 amd64 2.1.27~101-g0780600+dfsg-3.1 [105 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 libldap-common all 2.4.45+dfsg-1 [87.0 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.45+dfsg-1 [223 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 libnghttp2-14 amd64 1.31.1-1 [80.7 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 libpsl5 amd64 0.20.1-1 [52.6 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-1+b1 [60.4 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 libssh2-1 amd64 1.8.0-1 [138 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.0.2 amd64 1.0.2o-1 [1296 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 libcurl3 amd64 7.58.0-2 [312 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.5-3 [96.8 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 librhash0 amd64 1.3.6-2 [87.1 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 libuv1 amd64 1.18.0-3 [98.5 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 cmake amd64 3.11.1-1 [3190 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 dc amd64 1.07.1-2 [72.0 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2.1 [547 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 17 [16.5 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.60-1 [95.6 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.041-1 [19.9 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.041-1 [12.0 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.56.1-2 [2928 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-2 [144 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-6 [1302 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 11.2.1 [1013 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libpng16-16 amd64 1.6.34-1 [287 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 libfreetype6 amd64 2.8.1-2 [461 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig-config all 2.13.0-4 [280 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 libfontconfig1 amd64 2.13.0-4 [343 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig amd64 2.13.0-4 [405 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 icu-devtools amd64 57.1-9 [177 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 x11-common all 1:7.7+19 [251 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 libsm6 amd64 2:1.2.2-1+b3 [33.3 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 libxcb1 amd64 1.13-1 [136 kB] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 libx11-data all 2:1.6.5-1 [292 kB] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 libx11-6 amd64 2:1.6.5-1 [749 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 libxt6 amd64 1:1.1.5-1 [188 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 libaudio2 amd64 1.9.4-6 [80.0 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 libbz2-dev amd64 1.0.6-8.1 [29.4 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 libcharls1 amd64 1.1.0+dfsg-2 [56.0 kB] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 libcharls-dev amd64 1.1.0+dfsg-2 [21.6 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 libdbus-1-3 amd64 1.12.8-1 [209 kB] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 libicu-dev amd64 57.1-9 [16.6 MB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 libxml2-dev amd64 2.9.4+dfsg1-6.1 [821 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.1 amd64 1.1.0h-2 [1352 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 libssl-dev amd64 1.1.0h-2 [1589 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-1 [214 kB] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libpng-dev amd64 1.6.34-1 [294 kB] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 libwrap0 amd64 7.6.q-27 [58.6 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libwrap0-dev amd64 7.6.q-27 [21.5 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libjbig-dev amd64 2.1-3.1+b2 [30.5 kB] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:1.5.2-2+b1 [208 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 liblzma-dev amd64 5.2.2-1.3 [292 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5 amd64 4.0.9-5 [246 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 libtiffxx5 amd64 4.0.9-5 [100 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5-dev amd64 4.0.9-5 [367 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 libtiff-dev amd64 4.0.9-5 [96.3 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 libdcmtk12 amd64 3.6.2-3 [4559 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 libdcmtk-dev amd64 3.6.2-3 [917 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-common all 2.4.91-2 [13.5 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 libdrm2 amd64 2.4.91-2 [39.9 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.91-2 [28.4 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 libpciaccess0 amd64 0.14-1 [53.5 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-intel1 amd64 2.4.91-2 [69.3 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-nouveau2 amd64 2.4.91-2 [26.0 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.91-2 [31.1 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 libelf1 amd64 0.170-0.4 [162 kB] Get:109 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-double3 amd64 3.3.7-1+b1 [740 kB] Get:110 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-long3 amd64 3.3.7-1+b1 [315 kB] Get:111 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.7-1+b1 [559 kB] Get:112 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-single3 amd64 3.3.7-1+b1 [770 kB] Get:113 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-bin amd64 3.3.7-1+b1 [51.0 kB] Get:114 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-dev amd64 3.3.7-1+b1 [2128 kB] Get:115 http://127.0.0.1:9999/debian unstable/main amd64 libfontenc1 amd64 1:1.1.3-1+b2 [24.4 kB] Get:116 http://127.0.0.1:9999/debian unstable/main amd64 libglapi-mesa amd64 17.3.9-1 [61.4 kB] Get:117 http://127.0.0.1:9999/debian unstable/main amd64 libllvm5.0 amd64 1:5.0.1-4 [13.7 MB] Get:118 http://127.0.0.1:9999/debian unstable/main amd64 libsensors4 amd64 1:3.4.0-4 [53.3 kB] Get:119 http://127.0.0.1:9999/debian unstable/main amd64 libgl1-mesa-dri amd64 17.3.9-1 [5907 kB] Get:120 http://127.0.0.1:9999/debian unstable/main amd64 libglvnd0 amd64 1.0.0+git20180308-2 [47.7 kB] Get:121 http://127.0.0.1:9999/debian unstable/main amd64 libx11-xcb1 amd64 2:1.6.5-1 [185 kB] Get:122 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-dri2-0 amd64 1.13-1 [99.6 kB] Get:123 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-dri3-0 amd64 1.13-1 [99.3 kB] Get:124 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-glx0 amd64 1.13-1 [115 kB] Get:125 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-present0 amd64 1.13-1 [98.2 kB] Get:126 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-sync1 amd64 1.13-1 [102 kB] Get:127 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-xfixes0 amd64 1.13-1 [102 kB] Get:128 http://127.0.0.1:9999/debian unstable/main amd64 libxfixes3 amd64 1:5.0.3-1 [21.9 kB] Get:129 http://127.0.0.1:9999/debian unstable/main amd64 libxdamage1 amd64 1:1.1.4-3 [14.4 kB] Get:130 http://127.0.0.1:9999/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:131 http://127.0.0.1:9999/debian unstable/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get:132 http://127.0.0.1:9999/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:133 http://127.0.0.1:9999/debian unstable/main amd64 libglx-mesa0 amd64 17.3.9-1 [171 kB] Get:134 http://127.0.0.1:9999/debian unstable/main amd64 liblcms2-2 amd64 2.9-1 [145 kB] Get:135 http://127.0.0.1:9999/debian unstable/main amd64 libmng1 amd64 1.0.10+dfsg-3.1+b5 [211 kB] Get:136 http://127.0.0.1:9999/debian unstable/main amd64 libmxml1 amd64 2.11-1 [27.7 kB] Get:137 http://127.0.0.1:9999/debian unstable/main amd64 libmxml-dev amd64 2.11-1 [38.7 kB] Get:138 http://127.0.0.1:9999/debian unstable/main amd64 libpixman-1-0 amd64 0.34.0-2 [529 kB] Get:139 http://127.0.0.1:9999/debian unstable/main amd64 qtcore4-l10n all 4:4.8.7+dfsg-15 [660 kB] Get:140 http://127.0.0.1:9999/debian unstable/main amd64 libqtcore4 amd64 4:4.8.7+dfsg-15 [1594 kB] Get:141 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-xml amd64 4:4.8.7+dfsg-15 [145 kB] Get:142 http://127.0.0.1:9999/debian unstable/main amd64 libqtdbus4 amd64 4:4.8.7+dfsg-15 [229 kB] Get:143 http://127.0.0.1:9999/debian unstable/main amd64 qtchooser amd64 64-ga1b6736-5 [25.5 kB] Get:144 http://127.0.0.1:9999/debian unstable/main amd64 qdbus amd64 4:4.8.7+dfsg-15 [76.6 kB] Get:145 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-dbus amd64 4:4.8.7+dfsg-15 [53.3 kB] Get:146 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-network amd64 4:4.8.7+dfsg-15 [594 kB] Get:147 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-script amd64 4:4.8.7+dfsg-15 [901 kB] Get:148 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-sql amd64 4:4.8.7+dfsg-15 [145 kB] Get:149 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-xmlpatterns amd64 4:4.8.7+dfsg-15 [1136 kB] Get:150 http://127.0.0.1:9999/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:151 http://127.0.0.1:9999/debian unstable/main amd64 libqtgui4 amd64 4:4.8.7+dfsg-15 [4114 kB] Get:152 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-declarative amd64 4:4.8.7+dfsg-15 [1136 kB] Get:153 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-designer amd64 4:4.8.7+dfsg-15 [3682 kB] Get:154 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-qt3support amd64 4:4.8.7+dfsg-15 [1086 kB] Get:155 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-dev-bin amd64 4:4.8.7+dfsg-15 [1714 kB] Get:156 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-help amd64 4:4.8.7+dfsg-15 [248 kB] Get:157 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-scripttools amd64 4:4.8.7+dfsg-15 [276 kB] Get:158 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-svg amd64 4:4.8.7+dfsg-15 [186 kB] Get:159 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-test amd64 4:4.8.7+dfsg-15 [107 kB] Get:160 http://127.0.0.1:9999/debian unstable/main amd64 qt4-linguist-tools amd64 4:4.8.7+dfsg-15 [898 kB] Get:161 http://127.0.0.1:9999/debian unstable/main amd64 qt4-qmake amd64 4:4.8.7+dfsg-15 [1277 kB] Get:162 http://127.0.0.1:9999/debian unstable/main amd64 libqt4-dev amd64 4:4.8.7+dfsg-15 [872 kB] Get:163 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.23.1-1 [603 kB] Get:164 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-dev amd64 3.23.1-1 [740 kB] Get:165 http://127.0.0.1:9999/debian unstable/main amd64 libxmu6 amd64 2:1.1.2-2 [60.3 kB] Get:166 http://127.0.0.1:9999/debian unstable/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:167 http://127.0.0.1:9999/debian unstable/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get:168 http://127.0.0.1:9999/debian unstable/main amd64 libxfont2 amd64 1:2.0.3-1 [135 kB] Get:169 http://127.0.0.1:9999/debian unstable/main amd64 libxkbfile1 amd64 1:1.0.9-2 [74.6 kB] Get:170 http://127.0.0.1:9999/debian unstable/main amd64 libxmuu1 amd64 2:1.1.2-2 [23.5 kB] Get:171 http://127.0.0.1:9999/debian unstable/main amd64 x11-xkb-utils amd64 7.7+4 [164 kB] Get:172 http://127.0.0.1:9999/debian unstable/main amd64 xauth amd64 1:1.0.10-1 [40.3 kB] Get:173 http://127.0.0.1:9999/debian unstable/main amd64 xkb-data all 2.23.1-1 [675 kB] Get:174 http://127.0.0.1:9999/debian unstable/main amd64 xserver-common all 2:1.19.6-1 [2085 kB] Get:175 http://127.0.0.1:9999/debian unstable/main amd64 libglx0 amd64 1.0.0+git20180308-2 [29.9 kB] Get:176 http://127.0.0.1:9999/debian unstable/main amd64 libgl1 amd64 1.0.0+git20180308-2 [86.3 kB] Get:177 http://127.0.0.1:9999/debian unstable/main amd64 xvfb amd64 2:1.19.6-1 [2842 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 118 MB in 1s (89.3 MB/s) Selecting previously unselected package bsdmainutils. 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Setting up libqtcore4:amd64 (4:4.8.7+dfsg-15) ... Setting up autotools-dev (20180224.1) ... Setting up libldap-2.4-2:amd64 (2.4.45+dfsg-1) ... Setting up libssl1.1:amd64 (1.1.0h-2) ... Setting up libcharls-dev:amd64 (1.1.0+dfsg-2) ... Setting up dc (1.07.1-2) ... Setting up libsqlite3-0:amd64 (3.23.1-1) ... Setting up libfontenc1:amd64 (1:1.1.3-1+b2) ... Setting up libtiffxx5:amd64 (4.0.9-5) ... Setting up libpciaccess0:amd64 (0.14-1) ... Setting up libfftw3-single3:amd64 (3.3.7-1+b1) ... Setting up libsensors4:amd64 (1:3.4.0-4) ... Setting up icu-devtools (57.1-9) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.5.2-2+b1) ... Setting up liblzma-dev:amd64 (5.2.2-1.3) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libkeyutils1:amd64 (1.5.9-9.2) ... Setting up bsdmainutils (11.1.2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up bc (1.07.1-2) ... Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libqt4-test:amd64 (4:4.8.7+dfsg-15) ... Setting up libfftw3-long3:amd64 (3.3.7-1+b1) ... Setting up libx11-data (2:1.6.5-1) ... Setting up libqt4-xml:amd64 (4:4.8.7+dfsg-15) ... Setting up qt4-linguist-tools (4:4.8.7+dfsg-15) ... Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up autopoint (0.19.8.1-6) ... Setting up libdbus-1-3:amd64 (1.12.8-1) ... Setting up liblzo2-2:amd64 (2.08-1.2+b2) ... Setting up libwrap0:amd64 (7.6.q-27) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-1) ... Setting up libfile-stripnondeterminism-perl (0.041-1) ... Setting up libfftw3-bin (3.3.7-1+b1) ... Setting up fontconfig-config (2.13.0-4) ... Setting up libmng1:amd64 (1.0.10+dfsg-3.1+b5) ... Setting up libwrap0-dev:amd64 (7.6.q-27) ... Setting up gettext (0.19.8.1-6) ... Setting up libsqlite3-dev:amd64 (3.23.1-1) ... Setting up libarchive13:amd64 (3.2.2-3.1) ... Setting up libssl-dev:amd64 (1.1.0h-2) ... Setting up qt4-qmake (4:4.8.7+dfsg-15) ... Setting up libtiff5-dev:amd64 (4.0.9-5) ... Setting up libxfont2:amd64 (1:2.0.3-1) ... Setting up autoconf (2.69-11) ... Setting up libqt4-sql:amd64 (4:4.8.7+dfsg-15) ... Setting up libicu-dev (57.1-9) ... Setting up file (1:5.33-2) ... Setting up libkrb5support0:amd64 (1.16-2) ... Setting up libdrm2:amd64 (2.4.91-2) ... Setting up libxml2-dev:amd64 (2.9.4+dfsg1-6.1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libdrm-intel1:amd64 (2.4.91-2) ... Setting up libjpeg-dev (1:1.5.2-2) ... Setting up libfftw3-dev:amd64 (3.3.7-1+b1) ... Setting up automake (1:1.15.1-3.1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libdcmtk12 (3.6.2-3) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up man-db (2.8.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libdrm-radeon1:amd64 (2.4.91-2) ... Setting up libpng-dev:amd64 (1.6.34-1) ... Setting up libdrm-nouveau2:amd64 (2.4.91-2) ... Setting up libqtdbus4:amd64 (4:4.8.7+dfsg-15) ... Setting up libxcb1:amd64 (1.13-1) ... Setting up libtool (2.4.6-2.1) ... Setting up libxcb-present0:amd64 (1.13-1) ... Setting up libtiff-dev (4.0.9-5) ... Setting up libfontconfig1:amd64 (2.13.0-4) ... Setting up libxcb-dri2-0:amd64 (1.13-1) ... Setting up libsm6:amd64 (2:1.2.2-1+b3) ... Setting up libxcb-dri3-0:amd64 (1.13-1) ... Setting up libk5crypto3:amd64 (1.16-2) ... Setting up libxcb-glx0:amd64 (1.13-1) ... Setting up libxcb-xfixes0:amd64 (1.13-1) ... Setting up po-debconf (1.0.20) ... Setting up libdrm-amdgpu1:amd64 (2.4.91-2) ... Setting up libqt4-script:amd64 (4:4.8.7+dfsg-15) ... Setting up libx11-6:amd64 (2:1.6.5-1) ... Setting up libgl1-mesa-dri:amd64 (17.3.9-1) ... Setting up libxmuu1:amd64 (2:1.1.2-2) ... Setting up qdbus (4:4.8.7+dfsg-15) ... Setting up libxcb-sync1:amd64 (1.13-1) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libkrb5-3:amd64 (1.16-2) ... Setting up libdcmtk-dev (3.6.2-3) ... Setting up libqt4-dbus:amd64 (4:4.8.7+dfsg-15) ... Setting up libqt4-network:amd64 (4:4.8.7+dfsg-15) ... Setting up libaudio2:amd64 (1.9.4-6) ... Setting up fontconfig (2.13.0-4) ... Regenerating fonts cache... done. Setting up libxkbfile1:amd64 (1:1.0.9-2) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libxfixes3:amd64 (1:5.0.3-1) ... Setting up libqt4-xmlpatterns:amd64 (4:4.8.7+dfsg-15) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up libgssapi-krb5-2:amd64 (1.16-2) ... Setting up xauth (1:1.0.10-1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libxaw7:amd64 (2:1.0.13-1+b2) ... Setting up libqtgui4:amd64 (4:4.8.7+dfsg-15) ... Setting up libxdamage1:amd64 (1:1.1.4-3) ... Setting up x11-xkb-utils (7.7+4) ... Setting up libqt4-designer:amd64 (4:4.8.7+dfsg-15) ... Setting up libcurl3:amd64 (7.58.0-2) ... Setting up libqt4-help:amd64 (4:4.8.7+dfsg-15) ... Setting up cmake (3.11.1-1) ... Setting up libqt4-svg:amd64 (4:4.8.7+dfsg-15) ... Setting up libglx-mesa0:amd64 (17.3.9-1) ... Setting up libqt4-scripttools:amd64 (4:4.8.7+dfsg-15) ... Setting up libqt4-declarative:amd64 (4:4.8.7+dfsg-15) ... Setting up xserver-common (2:1.19.6-1) ... Setting up libqt4-qt3support:amd64 (4:4.8.7+dfsg-15) ... Setting up libqt4-dev-bin (4:4.8.7+dfsg-15) ... Setting up libqt4-dev (4:4.8.7+dfsg-15) ... Setting up libglx0:amd64 (1.0.0+git20180308-2) ... Setting up libgl1:amd64 (1.0.0+git20180308-2) ... Setting up xvfb (2:1.19.6-1) ... Setting up dh-autoreconf (17) ... Setting up dh-strip-nondeterminism (0.041-1) ... Setting up debhelper (11.2.1) ... Setting up sbuild-build-depends-cmtk-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.27-3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-5-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.30-16 dpkg-dev_1.19.0.5 g++-7_7.3.0-17 gcc-7_7.3.0-17 libc6-dev_2.27-3 libstdc++-7-dev_7.3.0-17 libstdc++6_8-20180425-1 linux-libc-dev_4.15.17-1 Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.45 bash_4.4.18-2 bc_1.07.1-2 binutils_2.30-16 binutils-common_2.30-16 binutils-x86-64-linux-gnu_2.30-16 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.5 bzip2_1.0.6-8.1 clang-6.0_1:6.0-3 cmake_3.11.1-1 cmake-data_3.11.1-1 coreutils_8.28-1 cpp_4:7.3.0-3 cpp-7_7.3.0-17 dash_0.5.8-2.10 dc_1.07.1-2 debconf_1.5.66 debfoster_2.7-2.1+b1 debhelper_11.2.1 debian-archive-keyring_2017.7 debianutils_4.8.4 dh-autoreconf_17 dh-strip-nondeterminism_0.041-1 diffutils_1:3.6-1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-2 e2fsprogs_1.44.1-2 eatmydata_105-6 fakeroot_1.22-2 fdisk_2.31.1-0.5 file_1:5.33-2 findutils_4.6.0+git+20171230-2 fontconfig_2.13.0-4 fontconfig-config_2.13.0-4 fonts-dejavu-core_2.37-1 g++_4:7.3.0-3 g++-7_7.3.0-17 gcc_4:7.3.0-3 gcc-6-base_6.4.0-17 gcc-7_7.3.0-17 gcc-7-base_7.3.0-17 gcc-8-base_8-20180425-1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5+b1 hostname_3.20 icu-devtools_57.1-9 init-system-helpers_1.51 intltool-debian_0.35.0+20060710.4 lib32gcc1_1:8-20180425-1 lib32stdc++6_8-20180425-1 libacl1_2.2.52-3+b1 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libarchive13_3.2.2-3.1 libasan4_7.3.0-17 libatomic1_8-20180425-1 libattr1_1:2.4.47-2+b2 libaudio2_1.9.4-6 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libbinutils_2.30-16 libblkid1_2.31.1-0.5 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libbz2-dev_1.0.6-8.1 libc-bin_2.27-3 libc-dev-bin_2.27-3 libc6_2.27-3 libc6-dev_2.27-3 libc6-i386_2.27-3 libcap-ng0_0.7.9-1 libcc1-0_8-20180425-1 libcharls-dev_1.1.0+dfsg-2 libcharls1_1.1.0+dfsg-2 libcilkrts5_7.3.0-17 libclang-common-6.0-dev_1:6.0-3 libclang1-6.0_1:6.0-3 libcom-err2_1.44.1-2 libcomerr2_1.44.1-2 libcroco3_0.6.12-2 libcurl3_7.58.0-2 libdb5.3_5.3.28-13.1+b1 libdbus-1-3_1.12.8-1 libdcmtk-dev_3.6.2-3 libdcmtk12_3.6.2-3 libdebconfclient0_0.243 libdpkg-perl_1.19.0.5 libdrm-amdgpu1_2.4.91-2 libdrm-common_2.4.91-2 libdrm-intel1_2.4.91-2 libdrm-nouveau2_2.4.91-2 libdrm-radeon1_2.4.91-2 libdrm2_2.4.91-2 libeatmydata1_105-6 libedit2_3.1-20170329-1 libelf1_0.170-0.4 libexpat1_2.2.5-3 libext2fs2_1.44.1-2 libfakeroot_1.22-2 libfdisk1_2.31.1-0.5 libffi6_3.2.1-8 libfftw3-bin_3.3.7-1+b1 libfftw3-dev_3.3.7-1+b1 libfftw3-double3_3.3.7-1+b1 libfftw3-long3_3.3.7-1+b1 libfftw3-quad3_3.3.7-1+b1 libfftw3-single3_3.3.7-1+b1 libfile-stripnondeterminism-perl_0.041-1 libfontconfig1_2.13.0-4 libfontenc1_1:1.1.3-1+b2 libfreetype6_2.8.1-2 libgc1c2_1:7.4.2-8.2 libgcc-7-dev_7.3.0-17 libgcc1_1:8-20180425-1 libgcrypt20_1.8.2-2 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgl1_1.0.0+git20180308-2 libgl1-mesa-dri_17.3.9-1 libglapi-mesa_17.3.9-1 libglib2.0-0_2.56.1-2 libglvnd0_1.0.0+git20180308-2 libglx-mesa0_17.3.9-1 libglx0_1.0.0+git20180308-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180425-1 libgpg-error0_1.29-4 libgssapi-krb5-2_1.16-2 libhogweed4_3.4-1 libice6_2:1.0.9-2 libicu-dev_57.1-9 libicu57_57.1-9 libidn2-0_2.0.4-1.1 libisl15_0.18-4 libisl19_0.19-1 libitm1_8-20180425-1 libjbig-dev_2.1-3.1+b2 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjsoncpp1_1.7.4-3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libkrb5-3_1.16-2 libkrb5support0_1.16-2 liblcms2-2_2.9-1 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 libllvm5.0_1:5.0.1-4 libllvm6.0_1:6.0-3 liblsan0_8-20180425-1 liblz4-1_1.8.1.2-1 liblzma-dev_5.2.2-1.3 liblzma5_5.2.2-1.3 liblzo2-2_2.08-1.2+b2 libmagic-mgc_1:5.33-2 libmagic1_1:5.33-2 libmng1_1.0.10+dfsg-3.1+b5 libmount1_2.31.1-0.5 libmpc3_1.1.0-1 libmpfr4_3.1.6-1 libmpfr6_4.0.1-1 libmpx2_8-20180425-1 libmxml-dev_2.11-1 libmxml1_2.11-1 libncurses5_6.1+20180210-2 libncursesw5_6.1+20180210-2 libnettle6_3.4-1 libnghttp2-14_1.31.1-1 libobjc-7-dev_7.3.0-17 libobjc4_8-20180425-1 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam0g_1.1.8-3.7 libpciaccess0_0.14-1 libpcre3_2:8.39-9 libperl5.26_5.26.2-3 libpipeline1_1.5.0-1 libpixman-1-0_0.34.0-2 libpng-dev_1.6.34-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.14-1 libpsl5_0.20.1-1 libqt4-dbus_4:4.8.7+dfsg-15 libqt4-declarative_4:4.8.7+dfsg-15 libqt4-designer_4:4.8.7+dfsg-15 libqt4-dev_4:4.8.7+dfsg-15 libqt4-dev-bin_4:4.8.7+dfsg-15 libqt4-help_4:4.8.7+dfsg-15 libqt4-network_4:4.8.7+dfsg-15 libqt4-qt3support_4:4.8.7+dfsg-15 libqt4-script_4:4.8.7+dfsg-15 libqt4-scripttools_4:4.8.7+dfsg-15 libqt4-sql_4:4.8.7+dfsg-15 libqt4-svg_4:4.8.7+dfsg-15 libqt4-test_4:4.8.7+dfsg-15 libqt4-xml_4:4.8.7+dfsg-15 libqt4-xmlpatterns_4:4.8.7+dfsg-15 libqtcore4_4:4.8.7+dfsg-15 libqtdbus4_4:4.8.7+dfsg-15 libqtgui4_4:4.8.7+dfsg-15 libquadmath0_8-20180425-1 libreadline7_7.0-3+b1 librhash0_1.3.6-2 librtmp1_2.4+20151223.gitfa8646d.1-1+b1 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-1 libselinux1_2.7-2+b2 libsemanage-common_2.7-2 libsemanage1_2.7-2+b2 libsensors4_1:3.4.0-4 libsepol1_2.7-1 libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.31.1-0.5 libsqlite3-0_3.23.1-1 libsqlite3-dev_3.23.1-1 libss2_1.44.1-2 libssh2-1_1.8.0-1 libssl-dev_1.1.0h-2 libssl1.0.2_1.0.2o-1 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-17 libstdc++6_8-20180425-1 libsystemd0_238-4 libtasn1-6_4.13-2 libtiff-dev_4.0.9-5 libtiff5_4.0.9-5 libtiff5-dev_4.0.9-5 libtiffxx5_4.0.9-5 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-2 libtinfo6_6.1+20180210-2 libtool_2.4.6-2.1 libtsan0_8-20180425-1 libubsan0_7.3.0-17 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libuv1_1.18.0-3 libwrap0_7.6.q-27 libwrap0-dev_7.6.q-27 libx11-6_2:1.6.5-1 libx11-data_2:1.6.5-1 libx11-xcb1_2:1.6.5-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-dri2-0_1.13-1 libxcb-dri3-0_1.13-1 libxcb-glx0_1.13-1 libxcb-present0_1.13-1 libxcb-sync1_1.13-1 libxcb-xfixes0_1.13-1 libxcb1_1.13-1 libxdamage1_1:1.1.4-3 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxfont2_1:2.0.3-1 libxkbfile1_1:1.0.9-2 libxml2_2.9.4+dfsg1-6.1 libxml2-dev_2.9.4+dfsg1-6.1 libxmu6_2:1.1.2-2 libxmuu1_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxt6_1:1.1.5-1 libxxf86vm1_1:1.1.4-1+b2 libzstd1_1.3.4+dfsg-1 linux-libc-dev_4.15.17-1 login_1:4.5-1 lsb-base_9.20170808 m4_1.4.18-1 make_4.2.1-1 man-db_2.8.3-2 mawk_1.3.3-17+b3 mount_2.31.1-0.5 multiarch-support_2.27-3 ncurses-base_6.1+20180210-2 ncurses-bin_6.1+20180210-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-3 perl-base_5.26.2-3 perl-modules-5.26_5.26.2-3 po-debconf_1.0.20 procps_2:3.3.14-1 qdbus_4:4.8.7+dfsg-15 qt4-linguist-tools_4:4.8.7+dfsg-15 qt4-qmake_4:4.8.7+dfsg-15 qtchooser_64-ga1b6736-5 qtcore4-l10n_4:4.8.7+dfsg-15 readline-common_7.0-3 sbuild-build-depends-cmtk-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-1 ucf_3.0038 util-linux_2.31.1-0.5 x11-common_1:7.7+19 x11-xkb-utils_7.7+4 xauth_1:1.0.10-1 xkb-data_2.23.1-1 xserver-common_2:1.19.6-1 xvfb_2:1.19.6-1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Jun 30 17:49:34 2017 UTC gpgv: using RSA key 3AFA757FAC6EA11D2FF45DF088D24287A2D898B1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./cmtk_3.3.1-1.2.dsc dpkg-source: info: extracting cmtk in /<> dpkg-source: info: unpacking cmtk_3.3.1.orig.tar.gz dpkg-source: info: unpacking cmtk_3.3.1-1.2.debian.tar.xz dpkg-source: info: applying up_assure_no_as_needed_for_checklibdep dpkg-source: info: applying reproducible_build dpkg-source: info: applying fix_cmake_version_comparison dpkg-source: info: applying dcmtk-3.6.1-compatibility Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-67175a6b-db93-43e9-ad73-e878981347e9 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package cmtk dpkg-buildpackage: info: source version 3.3.1-1.2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Adrian Bunk dpkg-source --before-build cmtk-3.3.1 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --parallel dh: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean dh_auto_clean: Compatibility levels before 9 are deprecated (level 7 in use) rm -rf debian/manpages make[1]: Leaving directory '/<>' dh_clean -O--parallel rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ dh_clean: Compatibility levels before 9 are deprecated (level 7 in use) rm -f debian/cmtk.debhelper.log rm -f -- debian/cmtk.substvars debian/files rm -fr -- debian/cmtk/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch --parallel dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_update_autotools_config -a -O--parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- \ -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ -DBUILD_APPS:BOOL=ON \ -DBUILD_DOCUMENTATION:BOOL=OFF \ -DBUILD_GUI:BOOL=ON \ -DBUILD_SHARED_LIBS:BOOL=ON \ -DBUILD_TESTING:BOOL=OFF \ -DCMTK_BUILD_DCMTK:BOOL=OFF \ -DCMTK_BUILD_MXML:BOOL=OFF \ -DCMTK_BUILD_NRRD:BOOL=ON \ -DCMTK_BUILD_SQLITE:BOOL=OFF \ -DCMTK_BUILD_ZLIB:BOOL=OFF \ -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \ -DCMTK_USE_DCMTK:BOOL=ON \ -DCMTK_USE_FFTW:BOOL=ON \ -DCMTK_USE_QT:BOOL=ON \ -DCMTK_USE_SMP:BOOL=ON \ -DCMTK_USE_SQLITE:BOOL=ON \ -DDART_TESTING_TIMEOUT:STRING=15000 \ -DMXML_INCLUDE_DIR:PATH=/usr/include \ -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \ -DCMAKE_SKIP_RPATH:BOOL=OFF \ -DCMTK_BUILD_WRAPPER:BOOL=ON \ dh_auto_configure: Compatibility levels before 9 are deprecated (level 7 in use) install -d obj-x86_64-linux-gnu cd obj-x86_64-linux-gnu && cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=ON -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF -DCMTK_BUILD_ZLIB:BOOL=OFF -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=ON -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF -DCMTK_BUILD_WRAPPER:BOOL=ON -- The C compiler identification is Clang 6.0.0 -- The CXX compiler identification is Clang 6.0.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of void* -- Check size of void* - done -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Looking for limits.h -- Looking for limits.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for include files sys/types.h, sys/prctl.h -- Looking for include files sys/types.h, sys/prctl.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Check for STD namespace -- Check for STD namespace - found -- Check for ANSI scope -- Check for ANSI scope - found -- Check for sstream -- Check for sstream - found -- System is Linux-4.9.0-5-amd64 -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file execinfo.h -- Looking for include file execinfo.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for include file termios.h -- Looking for include file termios.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file sys/ioctl.h -- Looking for include file sys/ioctl.h - found -- Looking for include file sys/procfs.h -- Looking for include file sys/procfs.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file sys/times.h -- Looking for include file sys/times.h - found -- Looking for include file sys/utsname.h -- Looking for include file sys/utsname.h - found -- Check size of ((struct stat*)0)->st_mode -- Check size of ((struct stat*)0)->st_mode - done -- Check size of struct stat64 -- Check size of struct stat64 - failed -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Check the value of the 22nd bit of a 32-bit quiet-NaN -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 -- Looking for C++ include unordered_map -- Looking for C++ include unordered_map - found -- Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES) -- Could NOT find OpenMP_CXX (missing: OpenMP_CXX_FLAGS OpenMP_CXX_LIB_NAMES) -- Could NOT find OpenMP (missing: OpenMP_C_FOUND OpenMP_CXX_FOUND) -- Looking for include file dispatch/dispatch.h -- Looking for include file dispatch/dispatch.h - not found -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Using system zlib -- Building bundled mxml due to outdated or broken system mxml (minimum version required is 2.7, version 2.8 is broken; installed version is 0.0) -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.6") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found system libbz2 -- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS) -- Found DCMTK: /usr/include/dcmtk/config -- - tested library png -- - tested library tiff -- - tested library CharLS -- Using system DCMTK library. -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) -- Found SQLite3: /usr/lib/x86_64-linux-gnu/libsqlite3.so -- Using system sqlite3 library -- Check size of long long -- Check size of long long - done -- Looking for strdup -- Looking for strdup - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for vsnprintf -- Looking for vsnprintf - found -- Looking for Q_WS_X11 -- Looking for Q_WS_X11 - found -- Looking for Q_WS_WIN -- Looking for Q_WS_WIN - not found -- Looking for Q_WS_QWS -- Looking for Q_WS_QWS - not found -- Looking for Q_WS_MAC -- Looking for Q_WS_MAC - not found -- Found Qt4: /usr/bin/qmake (found suitable version "4.8.7", minimum required is "4.3.0") Qt4 Found OK () CMake Warning (dev) at CMakeLists.txt:698 (EXPORT_LIBRARY_DEPENDENCIES): Policy CMP0033 is not set: The export_library_dependencies command should not be called. Run "cmake --help-policy CMP0033" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BUILD_DOCUMENTATION CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_SYSCONFDIR DART_TESTING_TIMEOUT -- Build files have been written to: /<>/obj-x86_64-linux-gnu make[1]: Leaving directory '/<>' dh_auto_build -a -O--parallel dh_auto_build: Compatibility levels before 9 are deprecated (level 7 in use) cd obj-x86_64-linux-gnu && make -j8 -Oline make[1]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -H/<> -B/<>/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[1]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles /<>/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make[1]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f CMakeFiles/Makefile2 all make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Utilities/mxml /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/Utilities/mxml /<>/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkMxml make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Utilities/NrrdIO /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= Scanning dependencies of target NrrdIO make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/Numerics /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/Numerics /<>/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkNumerics make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /<>/Utilities/mxml/mxml-attr.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /<>/Utilities/mxml/mxml-entity.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /<>/Utilities/mxml/mxml-index.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /<>/Utilities/mxml/mxml-private.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /<>/Utilities/mxml/mxml-get.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /<>/Utilities/mxml/mxml-set.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/comment.o -c /<>/Utilities/NrrdIO/comment.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /<>/Utilities/mxml/mxml-search.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /<>/Utilities/mxml/mxml-string.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /<>/Utilities/mxml/mxml-node.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /<>/Utilities/NrrdIO/enumsNrrd.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/mop.o -c /<>/Utilities/NrrdIO/mop.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/mxml -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /<>/Utilities/mxml/mxml-file.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/string.o -c /<>/Utilities/NrrdIO/string.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 3%] Linking C shared library ../../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /<>/Utilities/NrrdIO/defaultsNrrd.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/754.o -c /<>/Utilities/NrrdIO/754.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/parseAir.o -c /<>/Utilities/NrrdIO/parseAir.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/dio.o -c /<>/Utilities/NrrdIO/dio.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 4%] Built target cmtkMxml make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/format.o -c /<>/Utilities/NrrdIO/format.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/System /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/System /<>/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkSystem make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 4%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /<>/Utilities/NrrdIO/formatEPS.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encoding.o -c /<>/Utilities/NrrdIO/encoding.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /<>/Utilities/NrrdIO/parseNrrd.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /<>/Utilities/NrrdIO/encodingAscii.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /<>/Utilities/NrrdIO/formatNRRD.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /<>/Utilities/NrrdIO/formatPNG.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /<>/libs/Numerics/ap.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /<>/Utilities/NrrdIO/encodingBzip2.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /<>/Utilities/NrrdIO/formatPNM.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /<>/Utilities/NrrdIO/encodingGzip.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatText.o -c /<>/Utilities/NrrdIO/formatText.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/array.o -c /<>/Utilities/NrrdIO/array.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /<>/Utilities/NrrdIO/encodingHex.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/accessors.o -c /<>/Utilities/NrrdIO/accessors.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /<>/Utilities/NrrdIO/formatVTK.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /<>/Utilities/NrrdIO/arraysNrrd.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/read.o -c /<>/Utilities/NrrdIO/read.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /<>/Utilities/NrrdIO/encodingRaw.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/gzio.o -c /<>/Utilities/NrrdIO/gzio.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/reorder.o -c /<>/Utilities/NrrdIO/reorder.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/axis.o -c /<>/Utilities/NrrdIO/axis.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /<>/libs/Numerics/bdsvd.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /<>/libs/Numerics/bidiagonal.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/write.o -c /<>/Utilities/NrrdIO/write.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/endianAir.o -c /<>/Utilities/NrrdIO/endianAir.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 8%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /<>/Utilities/NrrdIO/keyvalue.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /<>/Utilities/NrrdIO/biffbiff.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /<>/Utilities/NrrdIO/endianNrrd.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /<>/Utilities/NrrdIO/biffmsg.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /<>/libs/Numerics/blas.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /<>/libs/Numerics/cholesky.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /<>/libs/Numerics/det.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 9%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /<>/libs/Numerics/gammaf.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/sane.o -c /<>/Utilities/NrrdIO/sane.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /<>/Utilities/NrrdIO/methodsNrrd.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/enum.o -c /<>/Utilities/NrrdIO/enum.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/miscAir.o -c /<>/Utilities/NrrdIO/miscAir.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /<>/libs/System/cmtkCommandLine.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 11%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/Utilities/mxml -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -fPIC -o CMakeFiles/NrrdIO.dir/simple.o -c /<>/Utilities/NrrdIO/simple.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 11%] Linking C shared library ../../bin/libNrrdIO.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /<>/libs/Numerics/hessenberg.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /<>/libs/Numerics/hsschur.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 11%] Built target NrrdIO make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /<>/libs/Numerics/ibetaf.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /<>/libs/System/cmtkCommandLineCallback.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /<>/libs/Numerics/lbfgsb.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /<>/libs/Numerics/lq.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /<>/libs/Numerics/normaldistr.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /<>/libs/Numerics/lu.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /<>/libs/System/cmtkCommandLineItem.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /<>/libs/Numerics/nsevd.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /<>/libs/Numerics/qr.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /<>/libs/Numerics/reflections.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /<>/libs/Numerics/rotations.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /<>/libs/Numerics/sblas.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /<>/libs/System/cmtkCommandLineKeyToAction.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /<>/libs/Numerics/sevd.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /<>/libs/Numerics/spddet.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /<>/libs/Numerics/studenttdistr.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /<>/libs/Numerics/studentttests.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /<>/libs/Numerics/svd.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /<>/libs/System/cmtkCommandLineKeyToActionEnum.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /<>/libs/System/cmtkCommandLineKeyToActionSingle.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /<>/libs/Numerics/tdevd.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /<>/libs/Numerics/mersenne.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /<>/libs/Numerics/tridiagonal.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 16%] Linking CXX shared library ../../bin/libcmtkNumerics.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o CMakeFiles/cmtkNumerics.dir/det.cxx.o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o CMakeFiles/cmtkNumerics.dir/lq.cxx.o CMakeFiles/cmtkNumerics.dir/lu.cxx.o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o CMakeFiles/cmtkNumerics.dir/qr.cxx.o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o CMakeFiles/cmtkNumerics.dir/svd.cxx.o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,::::::::::::: make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 16%] Built target cmtkNumerics make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /<>/libs/System/cmtkCommandLineNonOptionParameter.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /<>/libs/System/cmtkCompressedStream.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /<>/libs/System/cmtkCommandLineHelp.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /<>/libs/System/cmtkCommandLineMan.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /<>/libs/System/cmtkCommandLineNonOptionParameterVector.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /<>/libs/System/cmtkCompressedStreamFile.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /<>/libs/System/cmtkMemory.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /<>/libs/System/cmtkCommandLineXML.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /<>/libs/System/cmtkCompressedStreamPipe.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /<>/libs/System/cmtkCommandLineWiki.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /<>/libs/System/cmtkMountPoints.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -c /<>/libs/System/cmtkCompressedStreamReaderBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /<>/libs/System/cmtkFileUtils.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /<>/libs/System/cmtkStackBacktrace.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /<>/libs/System/cmtkCompressedStreamZlib.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /<>/libs/System/cmtkConsole.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /<>/libs/System/cmtkRegressionTracker.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /<>/libs/System/cmtkProgress.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /<>/libs/System/cmtkProgressConsole.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /<>/libs/System/cmtkStrUtility.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -c /<>/libs/System/cmtkThreadSemaphore.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -c /<>/libs/System/cmtkTimers.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /<>/libs/System/cmtkThreads.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /<>/libs/System/cmtkThreadPoolThreads.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -c /<>/libs/System/cmtkCompressedStreamBZip2.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 19%] Linking CXX shared library ../../bin/libcmtkSystem.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 19%] Built target cmtkSystem make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/Base /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/Base /<>/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkBase make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 20%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /<>/libs/Base/cmtkAnatomicalOrientationBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 21%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /<>/libs/Base/cmtkBitVector.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 21%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /<>/libs/Base/cmtkCompatibilityMatrix4x4.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 21%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /<>/libs/Base/cmtkAnatomicalOrientation.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 21%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /<>/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 21%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /<>/libs/Base/cmtkAffineXformUniformVolume.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /<>/libs/Base/cmtkActiveShapeModel.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /<>/libs/Base/cmtkActiveDeformationModel.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /<>/libs/Base/cmtkAffineXform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /<>/libs/Base/cmtkDataGrid_Crop.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /<>/libs/Base/cmtkDataGrid.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /<>/libs/Base/cmtkDataGridLocalCorrelation.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /<>/libs/Base/cmtkDeformationField.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /<>/libs/Base/cmtkDeformationField_Jacobian.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /<>/libs/Base/cmtkDataGridConnectedComponents.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /<>/libs/Base/cmtkDataGridFilter.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /<>/libs/Base/cmtkDataGridMorphologicalOperators.cxx In file included from /<>/libs/Base/cmtkDataGridMorphologicalOperators.cxx:35: /<>/libs/Base/cmtkTemplateArray.h:434:12: warning: taking the absolute value of unsigned type 'unsigned char' has no effect [-Wabsolute-value] Data[i] = std::abs( Data[i] ); ^ /<>/libs/Base/cmtkTemplateArray.h:120:3: note: in instantiation of member function 'cmtk::TemplateArray::MakeAbsolute' requested here TemplateArray ( const size_t datasize = 0 ) ^ /<>/libs/Base/cmtkTemplateArray.h:79:41: note: in instantiation of member function 'cmtk::TemplateArray::TemplateArray' requested here return typename Self::SmartPtr( new Self( size ) ); ^ /<>/libs/Base/cmtkDataGridMorphologicalOperators.cxx:66:48: note: in instantiation of member function 'cmtk::TemplateArray::Create' requested here ByteArray::SmartPtr erodedArray = ByteArray::Create( dataArray->GetDataSize() ); ^ /<>/libs/Base/cmtkTemplateArray.h:434:12: note: remove the call to 'abs' since unsigned values cannot be negative Data[i] = std::abs( Data[i] ); ^~~~~~~~ 1 warning generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -c /<>/libs/Base/cmtkDirectionSet.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o -c /<>/libs/Base/cmtkFitAffineToLandmarks.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -c /<>/libs/Base/cmtkFilterVolume.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /<>/libs/Base/cmtkFitAffineToWarpXform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /<>/libs/Base/cmtkFitRigidToLandmarks.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /<>/libs/Base/cmtkFitPolynomialToLandmarks.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -c /<>/libs/Base/cmtkFitAffineToXformList.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /<>/libs/Base/cmtkFitSplineWarpToDeformationField.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /<>/libs/Base/cmtkFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /<>/libs/Base/cmtkFitSplineWarpToLandmarks.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /<>/libs/Base/cmtkGeneralLinearModel.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /<>/libs/Base/cmtkFitSplineWarpToXformList.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /<>/libs/Base/cmtkFitToXformListBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /<>/libs/Base/cmtkHistogram.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /<>/libs/Base/cmtkHypothesisTests.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /<>/libs/Base/cmtkImageOperation.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /<>/libs/Base/cmtkImageOperationCropRegion.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /<>/libs/Base/cmtkImageOperationCropThreshold.cxx /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:45: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:67: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:89: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:111: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:131: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~ %lld /<>/libs/Base/cmtkImageOperationCropThreshold.cxx:41:151: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); ~~ ^~~~~~~~~~~~~~~~~~ %lld 6 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /<>/libs/Base/cmtkImageOperationDistanceMap.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /<>/libs/Base/cmtkImageOperationDownsample.cxx /<>/libs/Base/cmtkImageOperationDownsample.cxx:54:55: warning: format specifies type 'int *' but the argument has type 'Types::GridIndexType *' (aka 'long long *') [-Wformat] const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); ~~~ ^~~~~~~~~ %5lld /<>/libs/Base/cmtkImageOperationDownsample.cxx:54:66: warning: format specifies type 'int *' but the argument has type 'Types::GridIndexType *' (aka 'long long *') [-Wformat] const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); ~~~ ^~~~~~~~~ %5lld /<>/libs/Base/cmtkImageOperationDownsample.cxx:54:77: warning: format specifies type 'int *' but the argument has type 'Types::GridIndexType *' (aka 'long long *') [-Wformat] const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); ~~~ ^~~~~~~~~ %5lld 3 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /<>/libs/Base/cmtkImageOperationMapValues.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /<>/libs/Base/cmtkImageOperationRegionFilter.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /<>/libs/Base/cmtkImageOperationHistogramEqualization.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /<>/libs/Base/cmtkImageOperationResampleIsotropic.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /<>/libs/Base/cmtkImageOperationThreshold.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /<>/libs/Base/cmtkImageOperationScaleToRange.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /<>/libs/Base/cmtkImageOperationPruneHistogram.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /<>/libs/Base/cmtkImageOperationOtsuThreshold.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /<>/libs/Base/cmtkLandmark.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /<>/libs/Base/cmtkImageOperationRevert.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /<>/libs/Base/cmtkJointHistogramBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o -c /<>/libs/Base/cmtkMathFunctionWrappers.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o -c /<>/libs/Base/cmtkLandmarkPair.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -c /<>/libs/Base/cmtkLandmarkList.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /<>/libs/Base/cmtkJointHistogram.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -c /<>/libs/Base/cmtkLandmarkPairList.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /<>/libs/Base/cmtkMagphanEMR051.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -c /<>/libs/Base/cmtkMathUtil_Random.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -c /<>/libs/Base/cmtkMathUtil_LinAlg.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o -c /<>/libs/Base/cmtkMathUtil_Statistics.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -c /<>/libs/Base/cmtkMagphanEMR051_GetPhantomImage.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /<>/libs/Base/cmtkMetaInformationObject.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o -c /<>/libs/Base/cmtkMatrix3x3.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -c /<>/libs/Base/cmtkMatrix4x4.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -c /<>/libs/Base/cmtkScalarImage.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /<>/libs/Base/cmtkSegmentationLabel.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /<>/libs/Base/cmtkParametricPlane.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -c /<>/libs/Base/cmtkPolynomialXform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -c /<>/libs/Base/cmtkScalarImageGradientField.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -c /<>/libs/Base/cmtkSplineWarpXform_Inverse.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -c /<>/libs/Base/cmtkSplineWarpXform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o -c /<>/libs/Base/cmtkSplineWarpXform_Jacobian.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -c /<>/libs/Base/cmtkTransformChangeToSpaceAffine.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -c /<>/libs/Base/cmtkSplineWarpXformUniformVolume.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -c /<>/libs/Base/cmtkSplineWarpXform_Rigidity.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o -c /<>/libs/Base/cmtkTransformChangeFromSpaceAffine.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -c /<>/libs/Base/cmtkTransformedVolumeAxes.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /<>/libs/Base/cmtkTypedArray_Statistics.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /<>/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -c /<>/libs/Base/cmtkTypedArray.cxx In file included from /<>/libs/Base/cmtkTypedArray.cxx:34: /<>/libs/Base/cmtkTemplateArray.h:434:12: warning: taking the absolute value of unsigned type 'unsigned char' has no effect [-Wabsolute-value] Data[i] = std::abs( Data[i] ); ^ /<>/libs/Base/cmtkTemplateArray.h:104:3: note: in instantiation of member function 'cmtk::TemplateArray::MakeAbsolute' requested here TemplateArray ( void *const data, const size_t datasize, const bool paddingflag, const void* paddingData, const Memory::DeallocatorFunctionPointer deallocator = NULL ) ^ /<>/libs/Base/cmtkTypedArray.cxx:123:34: note: in instantiation of member function 'cmtk::TemplateArray::TemplateArray' requested here return Self::SmartPtr( new ByteArray( data, size, paddingFlag, paddingData, deallocator ) ); ^ /<>/libs/Base/cmtkTemplateArray.h:434:12: note: remove the call to 'abs' since unsigned values cannot be negative Data[i] = std::abs( Data[i] ); ^~~~~~~~ /<>/libs/Base/cmtkTemplateArray.h:434:12: warning: taking the absolute value of unsigned type 'unsigned short' has no effect [-Wabsolute-value] Data[i] = std::abs( Data[i] ); ^ /<>/libs/Base/cmtkTemplateArray.h:104:3: note: in instantiation of member function 'cmtk::TemplateArray::MakeAbsolute' requested here TemplateArray ( void *const data, const size_t datasize, const bool paddingflag, const void* paddingData, const Memory::DeallocatorFunctionPointer deallocator = NULL ) ^ /<>/libs/Base/cmtkTypedArray.cxx:132:34: note: in instantiation of member function 'cmtk::TemplateArray::TemplateArray' requested here return Self::SmartPtr( new UShortArray( data, size, paddingFlag, paddingData, deallocator ) ); ^ /<>/libs/Base/cmtkTemplateArray.h:434:12: note: remove the call to 'abs' since unsigned values cannot be negative Data[i] = std::abs( Data[i] ); ^~~~~~~~ 2 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /<>/libs/Base/cmtkTypes.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /<>/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /<>/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /<>/libs/Base/cmtkUniformVolume_Crop.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /<>/libs/Base/cmtkUniformVolume_Differential.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /<>/libs/Base/cmtkUniformVolume.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /<>/libs/Base/cmtkUniformDistanceMap.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -c /<>/libs/Base/cmtkUniformVolumeLaplaceFilter.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -c /<>/libs/Base/cmtkUniformVolumeGaussianFilter.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -c /<>/libs/Base/cmtkUniformVolume_Space.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -c /<>/libs/Base/cmtkUniformVolume_Resample.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /<>/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -c /<>/libs/Base/cmtkUniformVolumeInterpolatorPartialVolume.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -c /<>/libs/Base/cmtkUniformVolumeMorphologicalOperators.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o -c /<>/libs/Base/cmtkUniformVolumePainter.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o -c /<>/libs/Base/cmtkVolume.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o -c /<>/libs/Base/cmtkVolumeClipping.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -c /<>/libs/Base/cmtkVolumeGridToGridLookup.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /<>/libs/Base/cmtkWarpXform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /<>/libs/Base/cmtkXform_Inverse.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /<>/libs/Base/cmtkXform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -c /<>/libs/Base/cmtkXformListEntry.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o -c /<>/libs/Base/cmtkXformList.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Linking CXX shared library ../../bin/libcmtkBase.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Base && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkBase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkBase.so -o ../../bin/libcmtkBase.so CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Built target cmtkBase make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make -f libs/Pipeline/CMakeFiles/cmtkPipeline.dir/build.make libs/Pipeline/CMakeFiles/cmtkPipeline.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/Pipeline /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/Pipeline /<>/obj-x86_64-linux-gnu/libs/Pipeline/CMakeFiles/cmtkPipeline.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkPipeline make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Pipeline/CMakeFiles/cmtkPipeline.dir/build.make libs/Pipeline/CMakeFiles/cmtkPipeline.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkImageRGB.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkColormap.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkImage.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 37%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkObject.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 38%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkImageToImageRGB.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 38%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkPipelineObject.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 38%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkPlane.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/IO /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/IO /<>/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkIO make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkObject.cxx.o -c /<>/libs/Pipeline/cmtkObject.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 38%] Building CXX object libs/Pipeline/CMakeFiles/cmtkPipeline.dir/cmtkRenderer.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkPipelineObject.cxx.o -c /<>/libs/Pipeline/cmtkPipelineObject.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 38%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkPlane.cxx.o -c /<>/libs/Pipeline/cmtkPlane.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkImageRGB.cxx.o -c /<>/libs/Pipeline/cmtkImageRGB.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkImage.cxx.o -c /<>/libs/Pipeline/cmtkImage.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkRenderer.cxx.o -c /<>/libs/Pipeline/cmtkRenderer.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /<>/libs/IO/cmtkAffineXformITKIO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 39%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkImageToImageRGB.cxx.o -c /<>/libs/Pipeline/cmtkImageToImageRGB.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /<>/libs/IO/cmtkSplineWarpXformITKIO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkPipeline_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkPipeline.dir/cmtkColormap.cxx.o -c /<>/libs/Pipeline/cmtkColormap.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 40%] Linking CXX shared library ../../bin/libcmtkPipeline.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Pipeline && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkPipeline.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkPipeline.so -o ../../bin/libcmtkPipeline.so CMakeFiles/cmtkPipeline.dir/cmtkColormap.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkImage.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkImageRGB.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkImageToImageRGB.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkObject.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkPipelineObject.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkPlane.cxx.o CMakeFiles/cmtkPipeline.dir/cmtkRenderer.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 40%] Built target cmtkPipeline make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /<>/libs/IO/cmtkFileFormat.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /<>/libs/IO/cmtkClassStreamParametricPlane.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /<>/libs/IO/cmtkClassStreamAffineXform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 40%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /<>/libs/IO/cmtkClassStreamPolynomialXform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /<>/libs/IO/cmtkClassStreamStudyList.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /<>/libs/IO/cmtkClassStreamWarpXform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /<>/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /<>/libs/IO/cmtkLandmarkIO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 41%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /<>/libs/IO/cmtkLandmarkListIO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /<>/libs/IO/cmtkImageFileDICOM.cxx In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: /<>/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr m_Dataset; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: /<>/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr m_Document; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ In file included from /<>/libs/IO/cmtkImageFileDICOM.cxx:33: /<>/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] this->m_Document = std::auto_ptr( NULL ); ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ /<>/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr fileformat( new DcmFileFormat ); ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ /<>/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ /<>/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ 6 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /<>/libs/IO/cmtkImageOperationApplyMask.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /<>/libs/IO/cmtkImageOperationMatchIntensities.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /<>/libs/IO/cmtkSegmentationLabelIO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /<>/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /<>/libs/IO/cmtkSiemensCSAHeader.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /<>/libs/IO/cmtkTypedStream.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /<>/libs/IO/cmtkImageStackDICOM.cxx In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: /<>/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr m_Dataset; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: /<>/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr m_Document; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ In file included from /<>/libs/IO/cmtkImageStackDICOM.cxx:33: In file included from /<>/libs/IO/cmtkImageStackDICOM.h:38: /<>/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] this->m_Document = std::auto_ptr( NULL ); ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ 3 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /<>/libs/IO/cmtkTypedStreamInput.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /<>/libs/IO/cmtkStudy.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /<>/libs/IO/cmtkTypedStreamOutput.cxx /<>/libs/IO/cmtkTypedStreamOutput.cxx:564:30: warning: format specifies type 'long' but the argument has type 'long long' [-Wformat] fprintf( File, "%ld ", array[i] ); ~~~ ^~~~~~~~ %lld 1 warning generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -c /<>/libs/IO/cmtkStudyList.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /<>/libs/IO/cmtkTypedStreamStudylist.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /<>/libs/IO/cmtkVolumeFromFile.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /<>/libs/IO/cmtkVolumeFromFileAnalyze.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /<>/libs/IO/cmtkVolumeFromFileBioRad.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /<>/libs/IO/cmtkVolumeFromFileMetaFile.cxx /<>/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:45: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); ~~ ^~~~~~~~~~~~~~~~~~~~~ %lld /<>/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:68: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); ~~ ^~~~~~~~~~~~~~~~~~~~~ %lld /<>/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:91: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); ~~ ^~~~~~~~~~~~~~~~~~~~~ %lld 3 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /<>/libs/IO/cmtkVolumeFromFileNRRD.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /<>/libs/IO/cmtkVolumeFromFileVanderbilt.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 45%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /<>/libs/IO/cmtkVolumeFromFileNifti.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -fPIC -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /<>/libs/IO/nifti1_io_math.c make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /<>/libs/IO/cmtkVolumeFromSlices.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /<>/libs/IO/cmtkVolumeIO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /<>/libs/IO/cmtkXformListIO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /<>/libs/IO/cmtkXformIONifti.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /<>/libs/IO/cmtkXformIO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /<>/libs/IO/cmtkXformIONrrd.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /<>/libs/IO/cmtkSQLite.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /<>/libs/IO/cmtkDICOM.cxx In file included from /<>/libs/IO/cmtkDICOM.cxx:35: /<>/libs/IO/cmtkDICOM.h:137:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr m_Document; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ /<>/libs/IO/cmtkDICOM.cxx:112:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr fileformat( new DcmFileFormat ); ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ /<>/libs/IO/cmtkDICOM.cxx:133:27: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset, this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ 3 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /<>/libs/IO/cmtkVolumeFromStudy.cxx In file included from /<>/libs/IO/cmtkVolumeFromStudy.cxx:43: /<>/libs/IO/cmtkDICOM.h:137:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr m_Document; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ 1 warning generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /<>/libs/IO/cmtkVolumeFromFileDICOM.cxx In file included from /<>/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /<>/libs/IO/cmtkDICOM.h:137:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr m_Document; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ 1 warning generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 46%] Linking CXX shared library ../../bin/libcmtkIO.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkIO.so -o ../../bin/libcmtkIO.so CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 46%] Built target cmtkIO make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make -f libs/Qt/CMakeFiles/cmtkQt.dir/build.make libs/Qt/CMakeFiles/cmtkQt.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 46%] Qt Wrapped File make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 47%] Qt Wrapped File make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 46%] Qt Wrapped File make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/lib/x86_64-linux-gnu/qt4/bin/moc -o /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQGraphicsPixmapItemEvents.cxx /<>/libs/Qt/cmtkQGraphicsPixmapItemEvents.h make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/lib/x86_64-linux-gnu/qt4/bin/moc -o /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtWindowLevelDialog.cxx /<>/libs/Qt/cmtkQtWindowLevelDialog.h make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/lib/x86_64-linux-gnu/qt4/bin/moc -o /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtImageOperators.cxx /<>/libs/Qt/cmtkQtImageOperators.h make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: 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/<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtTriplanarWindow.cxx /<>/libs/Qt/cmtkQtTriplanarWindow.h make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 48%] Qt Wrapped File make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/lib/x86_64-linux-gnu/qt4/bin/moc -o /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtWindowLevelControls.cxx /<>/libs/Qt/cmtkQtWindowLevelControls.h make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/Qt /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/Qt /<>/obj-x86_64-linux-gnu/libs/Qt/CMakeFiles/cmtkQt.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkQt make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f 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make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 49%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtIcons.cxx.o -c /<>/libs/Qt/cmtkQtIcons.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 50%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/cmtkQtTriplanarViewer.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtProgress.cxx.o -c /<>/libs/Qt/cmtkQtProgress.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 50%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/cmtkQtTriplanarWindow.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtSliderEntry.cxx.o -c /<>/libs/Qt/cmtkQtSliderEntry.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 50%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/cmtkQtTriplanarWindowViewActions.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtScrollRenderView.cxx.o -c /<>/libs/Qt/cmtkQtScrollRenderView.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 50%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/cmtkQtWindowLevelControls.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtRenderImageRGB.cxx.o -c /<>/libs/Qt/cmtkQtRenderImageRGB.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 50%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/cmtkQtWindowLevelDialog.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtImageOperators.cxx.o -c /<>/libs/Qt/cmtkQtImageOperators.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 50%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/moc_cmtkQGraphicsPixmapItemEvents.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtTriplanarViewerBatchMode.cxx.o -c /<>/libs/Qt/cmtkQtTriplanarViewerBatchMode.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 51%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/moc_cmtkQtImageOperators.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /<>/libs/Registration/cmtkAffineRegistrationCommandLine.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/moc_cmtkQGraphicsPixmapItemEvents.cxx.o -c /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQGraphicsPixmapItemEvents.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 51%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/moc_cmtkQtRenderImageRGB.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtTriplanarViewer.cxx.o -c /<>/libs/Qt/cmtkQtTriplanarViewer.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 51%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/moc_cmtkQtScrollRenderView.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtWindowLevelDialog.cxx.o -c /<>/libs/Qt/cmtkQtWindowLevelDialog.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 51%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/moc_cmtkQtSliderEntry.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtTriplanarWindowViewActions.cxx.o -c /<>/libs/Qt/cmtkQtTriplanarWindowViewActions.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 51%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/moc_cmtkQtTriplanarViewer.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtWindowLevelControls.cxx.o -c /<>/libs/Qt/cmtkQtWindowLevelControls.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 52%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/moc_cmtkQtTriplanarWindow.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/cmtkQtTriplanarWindow.cxx.o -c /<>/libs/Qt/cmtkQtTriplanarWindow.cxx /<>/libs/Qt/cmtkQtTriplanarWindow.cxx:997:73: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] str.sprintf( "Pixel Index: [%d,%d,%d] RAS: [%g,%g,%g] Value: %g", GridIndex[0], GridIndex[1], GridIndex[2], v[0], v[1], v[2], value ); ~~ ^~~~~~~~~~~~ %lld /<>/libs/Qt/cmtkQtTriplanarWindow.cxx:997:87: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] str.sprintf( "Pixel Index: [%d,%d,%d] RAS: [%g,%g,%g] Value: %g", GridIndex[0], GridIndex[1], GridIndex[2], v[0], v[1], v[2], value ); ~~ ^~~~~~~~~~~~ %lld /<>/libs/Qt/cmtkQtTriplanarWindow.cxx:997:101: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] str.sprintf( "Pixel Index: [%d,%d,%d] RAS: [%g,%g,%g] Value: %g", GridIndex[0], GridIndex[1], GridIndex[2], v[0], v[1], v[2], value ); ~~ ^~~~~~~~~~~~ %lld /<>/libs/Qt/cmtkQtTriplanarWindow.cxx:999:63: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] str.sprintf( "Pixel Index: [%d,%d,%d] RAS: [%g,%g,%g]", GridIndex[0], GridIndex[1], GridIndex[2], v[0], v[1], v[2] ); ~~ ^~~~~~~~~~~~ %lld /<>/libs/Qt/cmtkQtTriplanarWindow.cxx:999:77: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] str.sprintf( "Pixel Index: [%d,%d,%d] RAS: [%g,%g,%g]", GridIndex[0], GridIndex[1], GridIndex[2], v[0], v[1], v[2] ); ~~ ^~~~~~~~~~~~ %lld /<>/libs/Qt/cmtkQtTriplanarWindow.cxx:999:91: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] str.sprintf( "Pixel Index: [%d,%d,%d] RAS: [%g,%g,%g]", GridIndex[0], GridIndex[1], GridIndex[2], v[0], v[1], v[2] ); ~~ ^~~~~~~~~~~~ %lld 6 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 52%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/moc_cmtkQtWindowLevelControls.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /<>/libs/Registration/cmtkAffineRegistration.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/moc_cmtkQtImageOperators.cxx.o -c /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtImageOperators.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 52%] Building CXX object libs/Qt/CMakeFiles/cmtkQt.dir/moc_cmtkQtWindowLevelDialog.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/moc_cmtkQtRenderImageRGB.cxx.o -c /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtRenderImageRGB.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/moc_cmtkQtScrollRenderView.cxx.o -c /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtScrollRenderView.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/moc_cmtkQtSliderEntry.cxx.o -c /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtSliderEntry.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -c /<>/libs/Registration/cmtkBestDirectionOptimizer.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/moc_cmtkQtWindowLevelControls.cxx.o -c /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtWindowLevelControls.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/moc_cmtkQtTriplanarWindow.cxx.o -c /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtTriplanarWindow.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/moc_cmtkQtTriplanarViewer.cxx.o -c /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtTriplanarViewer.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkQt_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkQt.dir/moc_cmtkQtWindowLevelDialog.cxx.o -c /<>/obj-x86_64-linux-gnu/libs/Qt/moc_cmtkQtWindowLevelDialog.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 53%] Linking CXX shared library ../../bin/libcmtkQt.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /<>/libs/Registration/cmtkBestNeighbourOptimizer.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Qt && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkQt.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkQt.so -o ../../bin/libcmtkQt.so CMakeFiles/cmtkQt.dir/cmtkQtIcons.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtImageOperators.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtProgress.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtRenderImageRGB.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtScrollRenderView.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtSliderEntry.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtTriplanarViewerBatchMode.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtTriplanarViewer.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtTriplanarWindow.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtTriplanarWindowViewActions.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtWindowLevelControls.cxx.o CMakeFiles/cmtkQt.dir/cmtkQtWindowLevelDialog.cxx.o CMakeFiles/cmtkQt.dir/moc_cmtkQGraphicsPixmapItemEvents.cxx.o CMakeFiles/cmtkQt.dir/moc_cmtkQtImageOperators.cxx.o CMakeFiles/cmtkQt.dir/moc_cmtkQtRenderImageRGB.cxx.o CMakeFiles/cmtkQt.dir/moc_cmtkQtScrollRenderView.cxx.o CMakeFiles/cmtkQt.dir/moc_cmtkQtSliderEntry.cxx.o CMakeFiles/cmtkQt.dir/moc_cmtkQtTriplanarViewer.cxx.o CMakeFiles/cmtkQt.dir/moc_cmtkQtTriplanarWindow.cxx.o CMakeFiles/cmtkQt.dir/moc_cmtkQtWindowLevelControls.cxx.o CMakeFiles/cmtkQt.dir/moc_cmtkQtWindowLevelDialog.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkPipeline.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lQtGui -lQtCore -lbz2 ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 54%] Built target cmtkQt make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -c /<>/libs/Registration/cmtkEchoPlanarUnwarpFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -c /<>/libs/Registration/cmtkCongealingFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /<>/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /<>/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -c /<>/libs/Registration/cmtkElasticRegistrationCommandLine.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /<>/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /<>/libs/Registration/cmtkElasticRegistration.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /<>/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /<>/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /<>/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /<>/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -c /<>/libs/Registration/cmtkHausdorffDistance.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /<>/libs/Registration/cmtkImagePairRegistrationFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /<>/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /<>/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -c /<>/libs/Registration/cmtkImagePairRegistration.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /<>/libs/Registration/cmtkImagePairAffineRegistration.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -c /<>/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /<>/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -c /<>/libs/Registration/cmtkImagePairNonrigidRegistration.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -c /<>/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /<>/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /<>/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /<>/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /<>/libs/Registration/cmtkImagePairSimilarityMeasure.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /<>/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /<>/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /<>/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /<>/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -c /<>/libs/Registration/cmtkImageSymmetryPlaneFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -c /<>/libs/Registration/cmtkImageSymmetryPlaneFunctionalBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -c /<>/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -c /<>/libs/Registration/cmtkProtocolCallback.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -c /<>/libs/Registration/cmtkMakeInitialAffineTransformation.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -c /<>/libs/Registration/cmtkMultiChannelRegistrationFunctionalBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -c /<>/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -c /<>/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -c /<>/libs/Registration/cmtkRegistrationCallback.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -c /<>/libs/Registration/cmtkRegistrationJointHistogram.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o -c /<>/libs/Registration/cmtkReformatVolume.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -c /<>/libs/Registration/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o -c /<>/libs/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -c /<>/libs/Registration/cmtkSplineWarpCongealingFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -c /<>/libs/Registration/cmtkSymmetryPlaneFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -c /<>/libs/Registration/cmtkTypedArraySimilarity.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -c /<>/libs/Registration/cmtkTypedArraySimilarityMemory.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -c /<>/libs/Registration/cmtkTypedArraySimilarityRMI.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -c /<>/libs/Registration/cmtkVoxelMatchingCrossCorrelation.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o -c /<>/libs/Registration/cmtkVoxelMatchingCorrRatio.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -c /<>/libs/Registration/cmtkVoxelMatchingFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /<>/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /<>/libs/Registration/cmtkVoxelMatchingMetric.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o -c /<>/libs/Registration/cmtkSymmetricElasticFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -c /<>/libs/Registration/cmtkImageXformDB.cxx /<>/libs/Registration/cmtkImageXformDB.cxx:73:20: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] if ( (spaceKey == Self::NOTFOUND) ) ~~~~~~~~~^~~~~~~~~~~~~~~~~ /<>/libs/Registration/cmtkImageXformDB.cxx:73:20: note: remove extraneous parentheses around the comparison to silence this warning if ( (spaceKey == Self::NOTFOUND) ) ~ ^ ~ /<>/libs/Registration/cmtkImageXformDB.cxx:73:20: note: use '=' to turn this equality comparison into an assignment if ( (spaceKey == Self::NOTFOUND) ) ^~ = 1 warning generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o -c /<>/libs/Registration/cmtkVoxelMatchingMetric_Type.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -c /<>/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o -c /<>/libs/Registration/cmtkVoxelRegistration.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o -c /<>/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -c /<>/libs/Registration/cmtkVoxelMatchingElasticFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 63%] Linking CXX shared library ../../bin/libcmtkRegistration.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRegistration.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkRegistration.so -o ../../bin/libcmtkRegistration.so CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 63%] Built target cmtkRegistration make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/Recon /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/Recon /<>/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkRecon make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/libs/Segmentation /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/libs/Segmentation /<>/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkSegmentation make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /<>/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -c /<>/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /<>/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /<>/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -c /<>/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /<>/libs/Segmentation/cmtkAtlasSegmentation.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -c /<>/libs/Recon/cmtkVolumeInjectionReconstruction.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 66%] Linking CXX shared library ../../bin/libcmtkRecon.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkRecon.so -o ../../bin/libcmtkRecon.so CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 66%] Built target cmtkRecon make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /<>/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /<>/libs/Segmentation/cmtkLabelCombinationVoting.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /<>/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /<>/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /<>/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /<>/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /<>/libs/Segmentation/cmtkOverlapMeasures.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /<>/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /<>/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /<>/libs/Segmentation/cmtkSimpleLevelset.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /<>/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /<>/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /<>/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /<>/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 68%] Linking CXX shared library ../../bin/libcmtkSegmentation.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSegmentation.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -DHAVE_CONFIG_H -DTEEM_ZLIB -shared -Wl,-soname,libcmtkSegmentation.so -o ../../bin/libcmtkSegmentation.so CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so -lfftw3_threads -lfftw3 -lfftw3_threads ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 ../../bin/libcmtkMxml.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 68%] Built target cmtkSegmentation make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f 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apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /<>/apps/average_labels.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 71%] Linking CXX 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../bin/fit_affine_xform make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /<>/apps/fit_spline_xform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 71%] Linking CXX executable ../bin/fit_spline_xform make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /<>/apps/interleaved_bad_slices.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 71%] Linking CXX executable ../bin/interleaved_bad_slices make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 71%] Built target average_labels make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= Scanning dependencies of target film make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/glm.dir/glm.cxx.o -c /<>/apps/glm.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 72%] Linking CXX executable ../bin/glm make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 72%] Built target fit_affine_xform make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= Scanning dependencies of target levelset make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 73%] Built target fit_spline_xform make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 73%] Built target interleaved_bad_slices make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= Scanning dependencies of target fit_affine_dfield make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= Scanning dependencies of target detect_adni_phantom make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 73%] Built target glm make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /<>/apps/dcm2image.cxx In file included from /<>/apps/dcm2image.cxx:45: /<>/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr m_Dataset; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ In file included from /<>/apps/dcm2image.cxx:45: /<>/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr m_Document; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ In file included from /<>/apps/dcm2image.cxx:45: /<>/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] this->m_Document = std::auto_ptr( NULL ); ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ 3 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps 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../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 73%] Built target dcm2image make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= Scanning dependencies of target mat2dof make[3]: Leaving 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'/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/levelset.dir/levelset.cxx.o -c /<>/apps/levelset.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 73%] Linking CXX executable ../bin/levelset make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd 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cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Built target levelset make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= Scanning dependencies of target warpx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -c /<>/apps/detect_adni_phantom.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Linking CXX executable ../bin/detect_adni_phantom make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /<>/apps/fib2image.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Linking CXX executable ../bin/fib2image make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Built target fit_affine_dfield make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= Scanning dependencies of target gmm make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f 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Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Built target mcwarp make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= Scanning dependencies of target asegment make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Built target detect_adni_phantom make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make 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-ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Built target mat2dof make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= Scanning dependencies of target filter make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 74%] Building CXX object 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-lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 76%] Built target groupwise_warp make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= Scanning dependencies of target lmsba make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 76%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o make[3]: Leaving directory 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/usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /<>/apps/xform2dfield.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 77%] Linking CXX executable ../bin/xform2dfield make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /<>/apps/asegment_sri24.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 78%] Linking CXX executable ../bin/asegment_sri24 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/<>/obj-x86_64-linux-gnu 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-ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 78%] Built target asegment_sri24 make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= Scanning dependencies of target destripe make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 78%] Building CXX object 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../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 78%] Built target jidb make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= Scanning dependencies of target mrbias make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f 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-ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 78%] Built target lmsba make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog 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'/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 79%] Built target concat_affine make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= Scanning dependencies of target convert_warp make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sbai.dir/sbai.cxx.o -c /<>/apps/sbai.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/destripe.dir/destripe.cxx.o -c /<>/apps/destripe.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Linking CXX executable ../bin/sbai make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Linking CXX executable ../bin/destripe make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Built target destripe make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Built target sbai make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= Scanning dependencies of target split make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= Scanning dependencies of target warp2ps make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /<>/apps/registrationx.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Linking CXX executable ../bin/registrationx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convertx.dir/convertx.cxx.o -c /<>/apps/convertx.cxx In file included from /<>/apps/convertx.cxx:52: /<>/libs/Base/cmtkImageOperationErodeDilate.h:31:9: warning: '__cmtkImageOperationErodeDilate_h_included_' is used as a header guard here, followed by #define of a different macro [-Wheader-guard] #ifndef __cmtkImageOperationErodeDilate_h_included_ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libs/Base/cmtkImageOperationErodeDilate.h:32:9: note: '__cmtkImageOperationErodaDilate_h_included_' is defined here; did you mean '__cmtkImageOperationErodeDilate_h_included_'? #define __cmtkImageOperationErodaDilate_h_included_ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __cmtkImageOperationErodeDilate_h_included_ In file included from /<>/apps/convertx.cxx:53: /<>/libs/Base/cmtkImageOperationErodeDilateDistance.h:31:9: warning: '__cmtkImageOperationErodeDilateDistance_h_included_' is used as a header guard here, followed by #define of a different macro [-Wheader-guard] #ifndef __cmtkImageOperationErodeDilateDistance_h_included_ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libs/Base/cmtkImageOperationErodeDilateDistance.h:32:9: note: '__cmtkImageOperationErodaDilateDistance_h_included_' is defined here; did you mean '__cmtkImageOperationErodeDilateDistance_h_included_'? #define __cmtkImageOperationErodaDilateDistance_h_included_ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __cmtkImageOperationErodeDilateDistance_h_included_ 2 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Linking CXX executable ../bin/convertx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Built target registrationx make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/ttest.dir/ttest.cxx.o -c /<>/apps/ttest.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Linking CXX executable ../bin/ttest make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= Scanning dependencies of target imagemath make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mrbias.dir/mrbias.cxx.o -c /<>/apps/mrbias.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Linking CXX executable ../bin/mrbias make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Built target convertx make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /<>/apps/convert_warp.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Linking CXX executable ../bin/convert_warp make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= Scanning dependencies of target fit_spline_dfield make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 80%] Built target 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/usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/split.dir/split.cxx.o -c /<>/apps/split.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 81%] Linking CXX executable ../bin/warp2ps make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 82%] Linking CXX executable ../bin/split make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' 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-DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 82%] Built target warp2ps make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 82%] Built target split make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f 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-ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 84%] Built target fit_spline_dfield make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/overlap.dir/overlap.cxx.o -c /<>/apps/overlap.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= Scanning dependencies of target dof2mat make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 84%] Linking CXX executable ../bin/overlap make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /<>/apps/epiunwarp.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 84%] Linking CXX executable ../bin/epiunwarp make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /<>/apps/imagemath.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 85%] Linking CXX executable ../bin/imagemath make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /<>/apps/dwi_mask_bad_slices.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 85%] Linking CXX executable ../bin/dwi_mask_bad_slices make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd 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Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 85%] Built target epiunwarp make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f 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-lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 85%] Built target imagemath make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= Scanning dependencies of target detect_spheres_matched_filter make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' 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/usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lvote.dir/lvote.cxx.o -c /<>/apps/lvote.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 85%] Linking CXX executable ../bin/lvote make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 85%] Built target lvote make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -c /<>/apps/mk_phantom_3d.cxx /<>/apps/mk_phantom_3d.cxx:192:7: warning: 'auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr fileformat( new DcmFileFormat ); ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/c++/7.3.0/backward/auto_ptr.h:285:7: note: 'auto_ptr' has been explicitly marked deprecated here } _GLIBCXX_DEPRECATED; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../../include/x86_64-linux-gnu/c++/7.3.0/bits/c++config.h:85:46: note: expanded from macro '_GLIBCXX_DEPRECATED' # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) ^ 1 warning generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 86%] Linking CXX executable ../bin/mk_phantom_3d make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= Scanning dependencies of target stream_pixels make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 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-I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -c /<>/apps/mk_adni_phantom.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 88%] Linking CXX executable ../bin/mk_adni_phantom make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog 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../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 89%] Built target mk_analyze_hdr make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= Scanning dependencies of target gregxform make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' 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-DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /<>/apps/stream_pixels.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 91%] Linking CXX executable ../bin/stream_pixels make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -o ../bin/stream_pixels -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 91%] Built target stream_pixels make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /<>/apps/geomatch.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 91%] Linking CXX executable ../bin/geomatch make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= Scanning dependencies of target fit_affine_xform_landmarks make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 91%] Building CXX object 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'/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/probe.dir/probe.cxx.o -c /<>/apps/probe.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 91%] Built target geomatch make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend make[3]: Entering directory 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-isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /<>/apps/gregxform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 91%] Linking CXX executable ../bin/gregxform make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registration.dir/registration.cxx.o -c /<>/apps/registration.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 91%] Linking CXX executable ../bin/registration make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/<>/obj-x86_64-linux-gnu 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--color= Scanning dependencies of target reorient make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /<>/apps/pxsearch.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering 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-c /<>/apps/warp.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/gregxform.dir/gregxform.cxx.o -o ../bin/gregxform -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 91%] Linking CXX executable ../bin/warp make[3]: 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-isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -c /<>/apps/xform2scalar.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Linking CXX executable ../bin/xform2scalar make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Built target sequence make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= Scanning dependencies of target vol2csv make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sba.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Built target sba make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= Scanning dependencies of target similarity make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /<>/apps/streamxform.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Linking CXX executable ../bin/streamxform make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Built target xform2scalar make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/statistics.dir/statistics.cxx.o -c /<>/apps/statistics.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Linking CXX executable ../bin/statistics make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= Scanning dependencies of target volume_injection make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Built target streamxform make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= Scanning dependencies of target volume_reconstruction make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Built target statistics make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= Scanning dependencies of target vtkxform make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/describe.dir/describe.cxx.o -c /<>/apps/describe.cxx /<>/apps/describe.cxx:88:56: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); ~~ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ %lld /<>/apps/describe.cxx:88:89: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); ~~ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ %lld /<>/apps/describe.cxx:88:122: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); ~~ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ %lld /<>/apps/describe.cxx:124:47: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); ~~ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ %lld /<>/apps/describe.cxx:124:80: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); ~~ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ %lld /<>/apps/describe.cxx:124:113: warning: format specifies type 'int' but the argument has type 'long long' [-Wformat] fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); ~~ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ %lld 6 warnings generated. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 95%] Linking CXX executable ../bin/describe make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 95%] Built target describe make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= Scanning dependencies of target xform2itk make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /<>/apps/unsplit.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 96%] Linking CXX executable ../bin/unsplit make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sympl.dir/sympl.cxx.o -c /<>/apps/sympl.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 96%] Linking CXX executable ../bin/sympl make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 96%] Built target unsplit make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/apps /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/apps /<>/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= Scanning dependencies of target lsba make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/similarity.dir/similarity.cxx.o -c /<>/apps/similarity.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 96%] Linking CXX executable ../bin/similarity make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /<>/apps/vtkxform.cxx /<>/apps/vtkxform.cxx:190:24: error: non-constant-expression cannot be narrowed from type 'double' to 'float' in initializer list [-Wc++11-narrowing] float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; ^~~~~~ /<>/apps/vtkxform.cxx:190:24: note: insert an explicit cast to silence this issue float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; ^~~~~~ static_cast( ) /<>/apps/vtkxform.cxx:190:32: error: non-constant-expression cannot be narrowed from type 'double' to 'float' in initializer list [-Wc++11-narrowing] float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; ^~~~~~ /<>/apps/vtkxform.cxx:190:32: note: insert an explicit cast to silence this issue float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; ^~~~~~ static_cast( ) /<>/apps/vtkxform.cxx:190:40: error: non-constant-expression cannot be narrowed from type 'double' to 'float' in initializer list [-Wc++11-narrowing] float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; ^~~~~~ /<>/apps/vtkxform.cxx:190:40: note: insert an explicit cast to silence this issue float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; ^~~~~~ static_cast( ) 3 errors generated. make[3]: *** [apps/CMakeFiles/vtkxform.dir/build.make:66: apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o] Error 1 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: *** [CMakeFiles/Makefile2:3902: apps/CMakeFiles/vtkxform.dir/all] Error 2 make[2]: *** Waiting for unfinished jobs.... make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /<>/apps/vol2csv.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 96%] Linking CXX executable ../bin/vol2csv make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 96%] Built target sympl make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 96%] Built target similarity make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 96%] Built target vol2csv make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /<>/apps/volume_injection.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 97%] Linking CXX executable ../bin/volume_injection make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 97%] Built target volume_injection make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /<>/apps/xform2itk.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 97%] Linking CXX executable ../bin/xform2itk make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2itk.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 97%] Built target xform2itk make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -c /<>/apps/volume_reconstruction.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 97%] Linking CXX executable ../bin/volume_reconstruction make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_reconstruction.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -o ../bin/volume_reconstruction -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 97%] Built target volume_reconstruction make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DTEEM_ZLIB -I/<>/Utilities/mxml -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/<>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/Utilities/NrrdIO -I/<>/libs -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lsba.dir/lsba.cxx.o -c /<>/apps/lsba.cxx make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 97%] Linking CXX executable ../bin/lsba make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 /usr/bin/c++ -DHAVE_CONFIG_H -DTEEM_ZLIB -rdynamic CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/<>/obj-x86_64-linux-gnu -Wl,-rpath,/<>/obj-x86_64-linux-gnu:/<>/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_threads -lfftw3 -lfftw3_threads -lfftw3 -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 97%] Built target lsba make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[1]: *** [Makefile:166: all] Error 2 dh_auto_build: cd obj-x86_64-linux-gnu && make -j8 -Oline returned exit code 2 make: *** [debian/rules:33: build-arch] Error 25 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2018-05-02T13:02:45Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 121400 Build-Time: 81 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 22 Job: cmtk_3.3.1-1.2 Machine Architecture: amd64 Package: cmtk Package-Time: 116 Source-Version: 3.3.1-1.2 Space: 121400 Status: attempted Version: 3.3.1-1.2 -------------------------------------------------------------------------------- Finished at 2018-05-02T13:02:45Z Build needed 00:01:56, 121400k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 117.734735425s