DC-Build-Header: dipy 0.13.0-2 / 2018-05-02 12:19:12 +0000 DC-Task: type:rebuild-binarch-only source:dipy version:0.13.0-2 chroot:unstable esttime:1149 logfile:/tmp/dipy_0.13.0-2_unstable_clang60.log modes:clang60:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang60 dipy_0.13.0-2' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-11-92.eu-central-1.compute.internal +==============================================================================+ | dipy 0.13.0-2 (amd64) Wed, 02 May 2018 12:19:12 +0000 | +==============================================================================+ Package: dipy Version: 0.13.0-2 Source Version: 0.13.0-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-5557a3c4-d9eb-42c4-a372-5bad1430fa85' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang60 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=6.0 + echo 'Install of clang-6.0' Install of clang-6.0 + apt-get update Get:1 http://127.0.0.1:9999/debian unstable InRelease [242 kB] Get:2 http://127.0.0.1:9999/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Sources 2018-05-02-0830.09.pdiff [16.2 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Sources 2018-05-02-0830.09.pdiff [16.2 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2018-05-02-0830.09.pdiff [1781 B] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2018-05-02-0830.09.pdiff [1781 B] Get:6 http://127.0.0.1:9999/debian unstable/main Translation-en [6016 kB] Fetched 6332 kB in 2s (3519 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-6.0 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-6.0-doc Recommended packages: llvm-6.0-dev python libomp-dev libgpm2 The following NEW packages will be installed: clang-6.0 lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. Need to get 37.7 MB of archives. After this operation, 187 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.7-1 [92.1 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5 amd64 6.1+20180210-2 [95.7 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20170329-1 [85.2 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libllvm6.0 amd64 1:6.0-3 [14.5 MB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 8-20180425-1 [52.4 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-7-dev amd64 7.3.0-17 [204 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libc6-i386 amd64 2.27-3 [2855 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 lib32gcc1 amd64 1:8-20180425-1 [47.8 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 lib32stdc++6 amd64 8-20180425-1 [406 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-6.0-dev amd64 1:6.0-3 [3102 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-6.0 amd64 1:6.0-3 [6995 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 clang-6.0 amd64 1:6.0-3 [9175 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 37.7 MB in 0s (98.6 MB/s) Selecting previously unselected package libjsoncpp1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10022 files and directories currently installed.) Preparing to unpack .../00-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../01-libbsd0_0.8.7-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.7-1) ... Selecting previously unselected package libncurses5:amd64. Preparing to unpack .../02-libncurses5_6.1+20180210-2_amd64.deb ... Unpacking libncurses5:amd64 (6.1+20180210-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../03-libedit2_3.1-20170329-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20170329-1) ... Selecting previously unselected package libllvm6.0:amd64. Preparing to unpack .../04-libllvm6.0_1%3a6.0-3_amd64.deb ... Unpacking libllvm6.0:amd64 (1:6.0-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../05-libobjc4_8-20180425-1_amd64.deb ... Unpacking libobjc4:amd64 (8-20180425-1) ... Selecting previously unselected package libobjc-7-dev:amd64. Preparing to unpack .../06-libobjc-7-dev_7.3.0-17_amd64.deb ... Unpacking libobjc-7-dev:amd64 (7.3.0-17) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../07-libc6-i386_2.27-3_amd64.deb ... Unpacking libc6-i386 (2.27-3) ... Selecting previously unselected package lib32gcc1. Preparing to unpack .../08-lib32gcc1_1%3a8-20180425-1_amd64.deb ... Unpacking lib32gcc1 (1:8-20180425-1) ... Selecting previously unselected package lib32stdc++6. Preparing to unpack .../09-lib32stdc++6_8-20180425-1_amd64.deb ... Unpacking lib32stdc++6 (8-20180425-1) ... Selecting previously unselected package libclang-common-6.0-dev. Preparing to unpack .../10-libclang-common-6.0-dev_1%3a6.0-3_amd64.deb ... Unpacking libclang-common-6.0-dev (1:6.0-3) ... Selecting previously unselected package libclang1-6.0:amd64. Preparing to unpack .../11-libclang1-6.0_1%3a6.0-3_amd64.deb ... Unpacking libclang1-6.0:amd64 (1:6.0-3) ... Selecting previously unselected package clang-6.0. Preparing to unpack .../12-clang-6.0_1%3a6.0-3_amd64.deb ... Unpacking clang-6.0 (1:6.0-3) ... Setting up libncurses5:amd64 (6.1+20180210-2) ... Setting up libobjc4:amd64 (8-20180425-1) ... Setting up libc6-i386 (2.27-3) ... Setting up libbsd0:amd64 (0.8.7-1) ... Setting up libobjc-7-dev:amd64 (7.3.0-17) ... Processing triggers for libc-bin (2.27-3) ... Setting up lib32gcc1 (1:8-20180425-1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libllvm6.0:amd64 (1:6.0-3) ... Setting up libclang1-6.0:amd64 (1:6.0-3) ... Setting up lib32stdc++6 (8-20180425-1) ... Setting up libclang-common-6.0-dev (1:6.0-3) ... Setting up clang-6.0 (1:6.0-3) ... Processing triggers for libc-bin (2.27-3) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-6.0 g++-4.6 + ln -s clang-6.0 gcc-4.6 + ln -s clang-6.0 cpp-4.6 + ln -s clang-6.0 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-6.0 g++-4.7 + ln -s clang-6.0 gcc-4.7 + ln -s clang-6.0 cpp-4.7 + ln -s clang-6.0 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-6.0 g++-4.8 + ln -s clang-6.0 gcc-4.8 + ln -s clang-6.0 cpp-4.8 + ln -s clang-6.0 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-6.0 g++-4.9 + ln -s clang-6.0 gcc-4.9 + ln -s clang-6.0 cpp-4.9 + ln -s clang-6.0 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-6.0 g++-5 + ln -s clang-6.0 gcc-5 + ln -s clang-6.0 cpp-5 + ln -s clang-6.0 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-6.0 g++-6 + ln -s clang-6.0 gcc-6 + ln -s clang-6.0 cpp-6 + ln -s clang-6.0 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-6.0 g++-7 + ln -s clang-6.0 gcc-7 + ln -s clang-6.0 cpp-7 + ln -s clang-6.0 gcc + echo 'gcc-7 hold' + dpkg --set-selections + echo 'g++-7 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-6.0 g++-8 + ln -s clang-6.0 gcc-8 + ln -s clang-6.0 cpp-8 + ln -s clang-6.0 gcc + echo 'gcc-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + cd - /build/dipy-EvM8bs + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang60'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'dipy' packaging is maintained in the 'Git' version control system at: git://anonscm.debian.org/pkg-exppsy/dipy.git Please use: git clone git://anonscm.debian.org/pkg-exppsy/dipy.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 128 MB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main dipy 0.13.0-2 (dsc) [2477 B] Get:2 http://127.0.0.1:9999/debian unstable/main dipy 0.13.0-2 (tar) [122 MB] Get:3 http://127.0.0.1:9999/debian unstable/main dipy 0.13.0-2 (tar) [5638 kB] Get:4 http://127.0.0.1:9999/debian unstable/main dipy 0.13.0-2 (diff) [766 kB] Fetched 128 MB in 2s (68.5 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/dipy-EvM8bs/dipy-0.13.0' with '<>' I: NOTICE: Log filtering will replace 'build/dipy-EvM8bs' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-7KWNdO/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-7KWNdO/apt_archive ./ InRelease Get:2 copy:/<>/resolver-7KWNdO/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-7KWNdO/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-7KWNdO/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-7KWNdO/apt_archive ./ Packages [433 B] Fetched 1739 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-7KWNdO/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10771 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 7.0.50~), python-all-dev, python-numpy (>= 1:1.7.1~), python-h5py, python-scipy, cython (>= 0.13), python-matplotlib, python-sphinx (>= 1.0), python-nose, python-nibabel, libgomp1 Filtered Build-Depends: debhelper (>= 7.0.50~), python-all-dev, python-numpy (>= 1:1.7.1~), python-h5py, python-scipy, cython (>= 0.13), python-matplotlib, python-sphinx (>= 1.0), python-nose, python-nibabel, libgomp1 dpkg-deb: building package 'sbuild-build-depends-dipy-dummy' in '/<>/resolver-7KWNdO/apt_archive/sbuild-build-depends-dipy-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-dipy-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-7KWNdO/apt_archive ./ InRelease Get:2 copy:/<>/resolver-7KWNdO/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-7KWNdO/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-7KWNdO/apt_archive ./ Sources [563 B] Get:5 copy:/<>/resolver-7KWNdO/apt_archive ./ Packages [647 B] Fetched 2173 B in 0s (0 B/s) Reading package lists... Reading package lists... Install dipy build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cython debhelper dh-autoreconf dh-strip-nondeterminism docutils-common file fonts-lyx gettext gettext-base groff-base intltool-debian libaec0 libarchive-zip-perl libblas3 libcroco3 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libgfortran4 libglib2.0-0 libhdf5-100 libicu57 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 libmagic-mgc libmagic1 libncursesw6 libpipeline1 libpng16-16 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libreadline7 libsigsegv2 libsqlite3-0 libssl1.1 libsz2 libtimedate-perl libtool libxml2 m4 man-db mime-support openssl po-debconf python python-alabaster python-all python-all-dev python-babel python-babel-localedata python-backports.functools-lru-cache python-certifi python-chardet python-cycler python-dateutil python-decorator python-dev python-docutils python-h5py python-idna python-imagesize python-jinja2 python-kiwisolver python-markupsafe python-matplotlib python-matplotlib-data python-minimal python-nibabel python-nose python-numpy python-packaging python-pkg-resources python-pygments python-pyparsing python-requests python-roman python-scipy python-six python-sphinx python-subprocess32 python-typing python-tz python-urllib3 python2.7 python2.7-dev python2.7-minimal readline-common sgml-base sphinx-common ttf-bitstream-vera tzdata xml-core Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cython-doc dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff libjs-jquery-ui-docs libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python-doc python-tk python-cycler-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-h5py-doc python-jinja2-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript inkscape ipython librsvg2-common python-cairocffi python-configobj python-excelerator python-gobject python-matplotlib-doc python-qt4 python-sip python-tornado python-traits python-wxgtk3.0 texlive-extra-utils texlive-latex-extra ttf-staypuft python-nibabel-doc python-coverage python-nose-doc gfortran python-numpy-dbg python-numpy-doc python-setuptools python-pyparsing-doc python-cryptography python-openssl python-socks python-scipy-doc python-sphinx-rtd-theme libjs-mathjax texlive-fonts-recommended texlive-generic-extra latexmk imagemagick-6.q16 sphinx-doc python-ntlm python2.7-doc binfmt-support readline-doc sgml-base-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libgpm2 libltdl-dev libmail-sendmail-perl docutils-doc libpaper-utils python-pil python-tk python-dicom python-fuse python-mock python-enum34 python-cryptography python-ipaddress python-openssl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cython debhelper dh-autoreconf dh-strip-nondeterminism docutils-common file fonts-lyx gettext gettext-base groff-base intltool-debian libaec0 libarchive-zip-perl libblas3 libcroco3 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libgfortran4 libglib2.0-0 libhdf5-100 libicu57 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 libmagic-mgc libmagic1 libncursesw6 libpipeline1 libpng16-16 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libreadline7 libsigsegv2 libsqlite3-0 libssl1.1 libsz2 libtimedate-perl libtool libxml2 m4 man-db mime-support openssl po-debconf python python-alabaster python-all python-all-dev python-babel python-babel-localedata python-backports.functools-lru-cache python-certifi python-chardet python-cycler python-dateutil python-decorator python-dev python-docutils python-h5py python-idna python-imagesize python-jinja2 python-kiwisolver python-markupsafe python-matplotlib python-matplotlib-data python-minimal python-nibabel python-nose python-numpy python-packaging python-pkg-resources python-pygments python-pyparsing python-requests python-roman python-scipy python-six python-sphinx python-subprocess32 python-typing python-tz python-urllib3 python2.7 python2.7-dev python2.7-minimal readline-common sbuild-build-depends-dipy-dummy sgml-base sphinx-common ttf-bitstream-vera tzdata xml-core 0 upgraded, 108 newly installed, 0 to remove and 0 not upgraded. Need to get 95.7 MB of archives. After this operation, 350 MB of additional disk space will be used. Get:1 copy:/<>/resolver-7KWNdO/apt_archive ./ sbuild-build-depends-dipy-dummy 0.invalid.0 [940 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 11.1.2 [190 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-10 [1176 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.5.0-1 [29.0 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.8.3-2 [1180 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-minimal amd64 2.7.15-1 [393 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-minimal amd64 2.7.15-1 [1353 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 python-minimal amd64 2.7.15~rc1-1 [41.1 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 mime-support all 3.60 [36.7 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.5-3 [96.8 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libncursesw6 amd64 6.1+20180210-2 [131 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 7.0-3 [70.4 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 libreadline7 amd64 7.0-3+b1 [151 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.23.1-1 [603 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.1 amd64 1.1.0h-2 [1352 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-stdlib amd64 2.7.15-1 [1912 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 python2.7 amd64 2.7.15-1 [298 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 libpython-stdlib amd64 2.7.15~rc1-1 [20.5 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 python amd64 2.7.15~rc1-1 [155 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 sgml-base all 1.29 [14.8 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 tzdata all 2018d-1 [252 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.33-2 [234 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.33-2 [113 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.33-2 [65.6 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-6 [122 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-3.1 [736 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-6 [434 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 openssl amd64 1.1.0h-2 [744 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 ca-certificates all 20180409 [161 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 cython amd64 0.26.1-0.4 [1904 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2.1 [547 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 17 [16.5 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.60-1 [95.6 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.041-1 [19.9 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.041-1 [12.0 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.56.1-2 [2928 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-9 [7698 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-6.1 [725 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-2 [144 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-6 [1302 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 11.2.1 [1013 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 xml-core all 0.18 [23.4 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 docutils-common all 0.14+dfsg-3 [204 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 fonts-lyx all 2.3.0-2 [198 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 libaec0 amd64 1.0.2-1 [20.1 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran4 amd64 7.3.0-17 [487 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 libblas3 amd64 3.8.0-1 [150 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1-dev amd64 2.2.5-3 [140 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 libpng16-16 amd64 1.6.34-1 [287 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 libfreetype6 amd64 2.8.1-2 [461 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 libsz2 amd64 1.0.2-1 [6676 B] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-100 amd64 1.10.0-patch1+docs-4+b1 [1284 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libjs-jquery all 3.2.1-1 [154 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 libjs-underscore all 1.8.3~dfsg-1 [63.8 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 libjs-sphinxdoc all 1.7.4-1 [89.7 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 liblapack3 amd64 3.8.0-1 [2146 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7 amd64 2.7.15-1 [1052 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-dev amd64 2.7.15-1 [28.3 MB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 libpython-dev amd64 2.7.15~rc1-1 [20.6 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 libpython-all-dev amd64 2.7.15~rc1-1 [1048 B] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 python-alabaster all 0.7.8-1 [18.4 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 python-all amd64 2.7.15~rc1-1 [1028 B] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-dev amd64 2.7.15-1 [290 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 python-dev amd64 2.7.15~rc1-1 [1212 B] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 python-all-dev amd64 2.7.15~rc1-1 [1052 B] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 python-babel-localedata all 2.4.0+dfsg.1-2 [3415 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 python-pkg-resources all 39.0.1-2 [171 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 python-tz all 2018.4-1 [33.5 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 python-babel all 2.4.0+dfsg.1-2 [84.3 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 python-backports.functools-lru-cache all 1.4-2 [6032 B] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 python-certifi all 2018.1.18-3 [144 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 python-chardet all 3.0.4-1 [80.2 kB] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 python-six all 1.11.0-2 [15.1 kB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 python-cycler all 0.10.0-1 [7448 B] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 python-dateutil all 2.6.1-1 [61.1 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 python-decorator all 4.1.2-1 [13.7 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 python-roman all 2.0.0-3 [8688 B] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 python-docutils all 0.14+dfsg-3 [379 kB] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 python-numpy amd64 1:1.13.3-2 [1950 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 python-h5py amd64 2.7.1-2 [683 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 python-idna all 2.6-1 [34.1 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 python-imagesize all 0.7.1-1 [3814 B] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 python-markupsafe amd64 1.0-1+b1 [13.9 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 python-jinja2 all 2.10-1 [106 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 python-kiwisolver amd64 1.0.1-2 [66.9 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 ttf-bitstream-vera all 1.10-8 [352 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 python-matplotlib-data all 2.2.2-2 [4136 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 python-pyparsing all 2.2.0+dfsg1-2 [89.5 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 python-subprocess32 amd64 3.2.7-3 [29.5 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 python-matplotlib amd64 2.2.2-2 [5056 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 python-scipy amd64 0.19.1-2 [9701 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 python-nibabel all 2.2.1-2 [2213 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 python-nose all 1.3.7-4 [132 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 python-packaging all 17.1-1 [18.2 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 python-pygments all 2.2.0+dfsg-1 [590 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 python-urllib3 all 1.22-1 [97.7 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 python-requests all 2.18.4-2 [77.3 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 python-typing all 3.6.4-1 [22.7 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 sphinx-common all 1.7.4-1 [434 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 python-sphinx all 1.7.4-1 [446 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 95.7 MB in 1s (99.0 MB/s) Selecting previously unselected package bsdmainutils. (Reading database ... 10771 files and directories currently installed.) Preparing to unpack .../00-bsdmainutils_11.1.2_amd64.deb ... Unpacking bsdmainutils (11.1.2) ... Selecting previously unselected package groff-base. Preparing to unpack .../01-groff-base_1.22.3-10_amd64.deb ... Unpacking groff-base (1.22.3-10) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../02-libpipeline1_1.5.0-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.0-1) ... Selecting previously unselected package man-db. Preparing to unpack .../03-man-db_2.8.3-2_amd64.deb ... Unpacking man-db (2.8.3-2) ... Selecting previously unselected package libpython2.7-minimal:amd64. Preparing to unpack .../04-libpython2.7-minimal_2.7.15-1_amd64.deb ... Unpacking libpython2.7-minimal:amd64 (2.7.15-1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../05-python2.7-minimal_2.7.15-1_amd64.deb ... Unpacking python2.7-minimal (2.7.15-1) ... 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Selecting previously unselected package python. (Reading database ... 12213 files and directories currently installed.) Preparing to unpack .../00-python_2.7.15~rc1-1_amd64.deb ... Unpacking python (2.7.15~rc1-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../01-sgml-base_1.29_all.deb ... Unpacking sgml-base (1.29) ... Selecting previously unselected package tzdata. Preparing to unpack .../02-tzdata_2018d-1_all.deb ... Unpacking tzdata (2018d-1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.33-2_amd64.deb ... Unpacking libmagic-mgc (1:5.33-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../04-libmagic1_1%3a5.33-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.33-2) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.33-2_amd64.deb ... Unpacking file (1:5.33-2) ... Selecting previously unselected package gettext-base. 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Selecting previously unselected package sbuild-build-depends-dipy-dummy. Preparing to unpack .../90-sbuild-build-depends-dipy-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-dipy-dummy (0.invalid.0) ... Setting up libjs-jquery (3.2.1-1) ... Setting up readline-common (7.0-3) ... Setting up libaec0:amd64 (1.0.2-1) ... Setting up libexpat1:amd64 (2.2.5-3) ... Setting up libarchive-zip-perl (1.60-1) ... Setting up libjs-underscore (1.8.3~dfsg-1) ... Setting up mime-support (3.60) ... Setting up libgfortran4:amd64 (7.3.0-17) ... Setting up libpng16-16:amd64 (1.6.34-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libreadline7:amd64 (7.0-3+b1) ... Setting up tzdata (2018d-1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed May 2 12:19:42 UTC 2018. Universal Time is now: Wed May 2 12:19:42 UTC 2018. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up groff-base (1.22.3-10) ... Setting up libglib2.0-0:amd64 (2.56.1-2) ... No schema files found: doing nothing. Setting up libncursesw6:amd64 (6.1+20180210-2) ... Setting up libjs-sphinxdoc (1.7.4-1) ... Setting up gettext-base (0.19.8.1-6) ... Setting up libpipeline1:amd64 (1.5.0-1) ... Setting up m4 (1.4.18-1) ... Setting up sgml-base (1.29) ... Setting up libicu57:amd64 (57.1-9) ... Setting up libxml2:amd64 (2.9.4+dfsg1-6.1) ... Setting up libfreetype6:amd64 (2.8.1-2) ... Setting up libmagic-mgc (1:5.33-2) ... Setting up libmagic1:amd64 (1:5.33-2) ... Setting up libcroco3:amd64 (0.6.12-2) ... Setting up libblas3:amd64 (3.8.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Processing triggers for libc-bin (2.27-3) ... Setting up autotools-dev (20180224.1) ... Setting up libssl1.1:amd64 (1.1.0h-2) ... Setting up python-babel-localedata (2.4.0+dfsg.1-2) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up openssl (1.1.0h-2) ... Setting up sphinx-common (1.7.4-1) ... Setting up libsqlite3-0:amd64 (3.23.1-1) ... Setting up libexpat1-dev:amd64 (2.2.5-3) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up xml-core (0.18) ... Setting up bsdmainutils (11.1.2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up ca-certificates (20180409) ... Updating certificates in /etc/ssl/certs... 133 added, 0 removed; done. Setting up libpython2.7-stdlib:amd64 (2.7.15-1) ... Setting up autopoint (0.19.8.1-6) ... Setting up fonts-lyx (2.3.0-2) ... Setting up libsz2:amd64 (1.0.2-1) ... Setting up libfile-stripnondeterminism-perl (0.041-1) ... Setting up libhdf5-100:amd64 (1.10.0-patch1+docs-4+b1) ... Setting up python-matplotlib-data (2.2.2-2) ... Setting up gettext (0.19.8.1-6) ... Setting up liblapack3:amd64 (3.8.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up python2.7 (2.7.15-1) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.33-2) ... Setting up libpython-stdlib:amd64 (2.7.15~rc1-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libpython2.7:amd64 (2.7.15-1) ... Setting up automake (1:1.15.1-3.1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.8.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2.7-dev:amd64 (2.7.15-1) ... Setting up python2.7-dev (2.7.15-1) ... Setting up python (2.7.15~rc1-1) ... Setting up python-typing (3.6.4-1) ... Setting up python-pyparsing (2.2.0+dfsg1-2) ... Setting up python-idna (2.6-1) ... Setting up libtool (2.4.6-2.1) ... Setting up libpython-dev:amd64 (2.7.15~rc1-1) ... Setting up po-debconf (1.0.20) ... Setting up python-backports.functools-lru-cache (1.4-2) ... Setting up python-dev (2.7.15~rc1-1) ... Setting up python-certifi (2018.1.18-3) ... Setting up python-tz (2018.4-1) ... Setting up libpython-all-dev:amd64 (2.7.15~rc1-1) ... Setting up python-imagesize (0.7.1-1) ... Setting up python-alabaster (0.7.8-1) ... Setting up python-pkg-resources (39.0.1-2) ... Setting up python-roman (2.0.0-3) ... Setting up python-markupsafe (1.0-1+b1) ... Setting up python-numpy (1:1.13.3-2) ... Setting up cython (0.26.1-0.4) ... Setting up python-six (1.11.0-2) ... Setting up python-pygments (2.2.0+dfsg-1) ... Setting up python-packaging (17.1-1) ... Setting up python-decorator (4.1.2-1) ... Setting up python-subprocess32 (3.2.7-3) ... Setting up python-nose (1.3.7-4) ... Setting up python-all (2.7.15~rc1-1) ... Setting up python-urllib3 (1.22-1) ... Setting up python-h5py (2.7.1-2) ... Setting up python-chardet (3.0.4-1) ... Setting up python-kiwisolver (1.0.1-2) ... Setting up python-scipy (0.19.1-2) ... Setting up python-jinja2 (2.10-1) ... Setting up python-babel (2.4.0+dfsg.1-2) ... update-alternatives: using /usr/bin/pybabel-python2 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python-cycler (0.10.0-1) ... Setting up python-dateutil (2.6.1-1) ... Setting up python-all-dev (2.7.15~rc1-1) ... Setting up python-requests (2.18.4-2) ... Setting up python-nibabel (2.2.1-2) ... Setting up python-matplotlib (2.2.2-2) ... Processing triggers for sgml-base (1.29) ... Setting up docutils-common (0.14+dfsg-3) ... Processing triggers for sgml-base (1.29) ... Setting up python-docutils (0.14+dfsg-3) ... update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python-sphinx (1.7.4-1) ... Setting up dh-autoreconf (17) ... Setting up dh-strip-nondeterminism (0.041-1) ... Setting up debhelper (11.2.1) ... Setting up sbuild-build-depends-dipy-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.27-3) ... Processing triggers for ca-certificates (20180409) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-5-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.30-16 dpkg-dev_1.19.0.5 g++-7_7.3.0-17 gcc-7_7.3.0-17 libc6-dev_2.27-3 libstdc++-7-dev_7.3.0-17 libstdc++6_8-20180425-1 linux-libc-dev_4.15.17-1 Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.45 bash_4.4.18-2 binutils_2.30-16 binutils-common_2.30-16 binutils-x86-64-linux-gnu_2.30-16 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.5 bzip2_1.0.6-8.1 ca-certificates_20180409 clang-6.0_1:6.0-3 coreutils_8.28-1 cpp_4:7.3.0-3 cpp-7_7.3.0-17 cython_0.26.1-0.4 dash_0.5.8-2.10 debconf_1.5.66 debfoster_2.7-2.1+b1 debhelper_11.2.1 debian-archive-keyring_2017.7 debianutils_4.8.4 dh-autoreconf_17 dh-strip-nondeterminism_0.041-1 diffutils_1:3.6-1 docutils-common_0.14+dfsg-3 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-2 e2fsprogs_1.44.1-2 eatmydata_105-6 fakeroot_1.22-2 fdisk_2.31.1-0.5 file_1:5.33-2 findutils_4.6.0+git+20171230-2 fonts-lyx_2.3.0-2 g++_4:7.3.0-3 g++-7_7.3.0-17 gcc_4:7.3.0-3 gcc-6-base_6.4.0-17 gcc-7_7.3.0-17 gcc-7-base_7.3.0-17 gcc-8-base_8-20180425-1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5+b1 hostname_3.20 init-system-helpers_1.51 intltool-debian_0.35.0+20060710.4 lib32gcc1_1:8-20180425-1 lib32stdc++6_8-20180425-1 libacl1_2.2.52-3+b1 libaec0_1.0.2-1 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libasan4_7.3.0-17 libatomic1_8-20180425-1 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libbinutils_2.30-16 libblas3_3.8.0-1 libblkid1_2.31.1-0.5 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3 libc-dev-bin_2.27-3 libc6_2.27-3 libc6-dev_2.27-3 libc6-i386_2.27-3 libcap-ng0_0.7.9-1 libcc1-0_8-20180425-1 libcilkrts5_7.3.0-17 libclang-common-6.0-dev_1:6.0-3 libclang1-6.0_1:6.0-3 libcom-err2_1.44.1-2 libcomerr2_1.44.1-2 libcroco3_0.6.12-2 libdb5.3_5.3.28-13.1+b1 libdebconfclient0_0.243 libdpkg-perl_1.19.0.5 libeatmydata1_105-6 libedit2_3.1-20170329-1 libexpat1_2.2.5-3 libexpat1-dev_2.2.5-3 libext2fs2_1.44.1-2 libfakeroot_1.22-2 libfdisk1_2.31.1-0.5 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.041-1 libfreetype6_2.8.1-2 libgc1c2_1:7.4.2-8.2 libgcc-7-dev_7.3.0-17 libgcc1_1:8-20180425-1 libgcrypt20_1.8.2-2 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgfortran4_7.3.0-17 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180425-1 libgpg-error0_1.29-4 libhdf5-100_1.10.0-patch1+docs-4+b1 libhogweed4_3.4-1 libicu57_57.1-9 libidn2-0_2.0.4-1.1 libisl15_0.18-4 libisl19_0.19-1 libitm1_8-20180425-1 libjs-jquery_3.2.1-1 libjs-jquery-ui_1.12.1+dfsg-5 libjs-sphinxdoc_1.7.4-1 libjs-underscore_1.8.3~dfsg-1 libjsoncpp1_1.7.4-3 liblapack3_3.8.0-1 libllvm6.0_1:6.0-3 liblsan0_8-20180425-1 liblz4-1_1.8.1.2-1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-2 libmagic1_1:5.33-2 libmount1_2.31.1-0.5 libmpc3_1.1.0-1 libmpfr4_3.1.6-1 libmpfr6_4.0.1-1 libmpx2_8-20180425-1 libncurses5_6.1+20180210-2 libncursesw5_6.1+20180210-2 libncursesw6_6.1+20180210-2 libnettle6_3.4-1 libobjc-7-dev_7.3.0-17 libobjc4_8-20180425-1 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam0g_1.1.8-3.7 libpcre3_2:8.39-9 libperl5.26_5.26.2-3 libpipeline1_1.5.0-1 libpng16-16_1.6.34-1 libpython-all-dev_2.7.15~rc1-1 libpython-dev_2.7.15~rc1-1 libpython-stdlib_2.7.15~rc1-1 libpython2.7_2.7.15-1 libpython2.7-dev_2.7.15-1 libpython2.7-minimal_2.7.15-1 libpython2.7-stdlib_2.7.15-1 libquadmath0_8-20180425-1 libreadline7_7.0-3+b1 libseccomp2_2.3.3-1 libselinux1_2.7-2+b2 libsemanage-common_2.7-2 libsemanage1_2.7-2+b2 libsepol1_2.7-1 libsigsegv2_2.12-2 libsmartcols1_2.31.1-0.5 libsqlite3-0_3.23.1-1 libss2_1.44.1-2 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-17 libstdc++6_8-20180425-1 libsystemd0_238-4 libsz2_1.0.2-1 libtasn1-6_4.13-2 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-2 libtinfo6_6.1+20180210-2 libtool_2.4.6-2.1 libtsan0_8-20180425-1 libubsan0_7.3.0-17 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libxml2_2.9.4+dfsg1-6.1 libzstd1_1.3.4+dfsg-1 linux-libc-dev_4.15.17-1 login_1:4.5-1 m4_1.4.18-1 make_4.2.1-1 man-db_2.8.3-2 mawk_1.3.3-17+b3 mime-support_3.60 mount_2.31.1-0.5 multiarch-support_2.27-3 ncurses-base_6.1+20180210-2 ncurses-bin_6.1+20180210-2 openssl_1.1.0h-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-3 perl-base_5.26.2-3 perl-modules-5.26_5.26.2-3 po-debconf_1.0.20 python_2.7.15~rc1-1 python-alabaster_0.7.8-1 python-all_2.7.15~rc1-1 python-all-dev_2.7.15~rc1-1 python-babel_2.4.0+dfsg.1-2 python-babel-localedata_2.4.0+dfsg.1-2 python-backports.functools-lru-cache_1.4-2 python-certifi_2018.1.18-3 python-chardet_3.0.4-1 python-cycler_0.10.0-1 python-dateutil_2.6.1-1 python-decorator_4.1.2-1 python-dev_2.7.15~rc1-1 python-docutils_0.14+dfsg-3 python-h5py_2.7.1-2 python-idna_2.6-1 python-imagesize_0.7.1-1 python-jinja2_2.10-1 python-kiwisolver_1.0.1-2 python-markupsafe_1.0-1+b1 python-matplotlib_2.2.2-2 python-matplotlib-data_2.2.2-2 python-minimal_2.7.15~rc1-1 python-nibabel_2.2.1-2 python-nose_1.3.7-4 python-numpy_1:1.13.3-2 python-packaging_17.1-1 python-pkg-resources_39.0.1-2 python-pygments_2.2.0+dfsg-1 python-pyparsing_2.2.0+dfsg1-2 python-requests_2.18.4-2 python-roman_2.0.0-3 python-scipy_0.19.1-2 python-six_1.11.0-2 python-sphinx_1.7.4-1 python-subprocess32_3.2.7-3 python-typing_3.6.4-1 python-tz_2018.4-1 python-urllib3_1.22-1 python2.7_2.7.15-1 python2.7-dev_2.7.15-1 python2.7-minimal_2.7.15-1 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-dipy-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 sgml-base_1.29 sphinx-common_1.7.4-1 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-1 ttf-bitstream-vera_1.10-8 tzdata_2018d-1 util-linux_2.31.1-0.5 xml-core_0.18 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sun Nov 26 03:18:53 2017 UTC gpgv: using RSA key C5B905F0E8D9FD9668FF366FA2DE235062DA33FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./dipy_0.13.0-2.dsc dpkg-source: info: extracting dipy in /<> dpkg-source: info: unpacking dipy_0.13.0.orig.tar.gz dpkg-source: info: unpacking dipy_0.13.0.orig-doc-examples.tar.gz dpkg-source: info: unpacking dipy_0.13.0-2.debian.tar.xz dpkg-source: info: applying deb_allow_older_cython dpkg-source: info: applying deb_no_sources_for_docs dpkg-source: info: applying 1300.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-5557a3c4-d9eb-42c4-a372-5bad1430fa85 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package dipy dpkg-buildpackage: info: source version 0.13.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Yaroslav Halchenko dpkg-source --before-build dipy-0.13.0 dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from dipy-0.13.0/debian/source/options: --extend-diff-ignore=(^|/)dipy/COMMIT_INFO.txt$ fakeroot debian/rules clean dh --buildsystem=python_distutils clean --with python2 dh: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' find dipy -iname *.c | xargs grep -l -e 'Generated by Cython' | xargs -r rm -f rm -f pyx-stamps dh_auto_clean override_dh_auto_clean dh_auto_clean: Compatibility levels before 9 are deprecated (level 7 in use) python setup.py clean -a running clean 'build/lib.linux-x86_64-2.7' does not exist -- can't clean it 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it find . -name \*.pyc -exec rm {} \+ make[1]: Leaving directory '/<>' debian/rules override_dh_clean make[1]: Entering directory '/<>' : # I: Custom cleaning rm -rf build doc-stamp /usr/bin/make -C doc clean make[2]: Entering directory '/<>/doc' rm -rf reference/*.rst cd examples_built && rm -rf *.py *.rst *.png fig rm -rf _build/* rm *-stamp rm: cannot remove '*-stamp': No such file or directory make[2]: [Makefile:32: clean] Error 1 (ignored) make[2]: Leaving directory '/<>/doc' dh_clean dh_clean: Compatibility levels before 9 are deprecated (level 7 in use) make[1]: Leaving directory '/<>' debian/rules build-arch dh --buildsystem=python_distutils build-arch --with python2 dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_update_autotools_config -a -O--buildsystem=python_distutils dh_auto_configure -a -O--buildsystem=python_distutils dh_auto_configure: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules override_dh_auto_build make[1]: Entering directory '/<>' echo "D: HERE" D: HERE echo "2" | grep -q '^3' && PY=3 || PY= ; \ CYTHONVER=$(dpkg -l cython$PY 2>/dev/null | awk '/^ii/{print $3;}' || echo 0); \ dpkg --compare-versions "$CYTHONVER" lt "0.25.1" && { \ echo "I: Using pre-Cython-ed files for Python 2"; \ cd debian/cythonized-files$PY/ ; \ find . -name *.c | while read f; do cp $f ../../$f; done; \ cp pyx-stamps ../../; } || : dh_auto_build dh_auto_build: Compatibility levels before 9 are deprecated (level 7 in use) python setup.py build --force running build running build_py creating build creating build/lib.linux-x86_64-2.7 creating build/lib.linux-x86_64-2.7/dipy copying dipy/pkg_info.py -> build/lib.linux-x86_64-2.7/dipy copying dipy/__init__.py -> build/lib.linux-x86_64-2.7/dipy copying dipy/info.py -> build/lib.linux-x86_64-2.7/dipy creating build/lib.linux-x86_64-2.7/dipy/tests copying dipy/tests/scriptrunner.py -> build/lib.linux-x86_64-2.7/dipy/tests copying dipy/tests/test_scripts.py -> build/lib.linux-x86_64-2.7/dipy/tests copying dipy/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/tests creating build/lib.linux-x86_64-2.7/dipy/align copying dipy/align/scalespace.py -> build/lib.linux-x86_64-2.7/dipy/align copying dipy/align/metrics.py -> build/lib.linux-x86_64-2.7/dipy/align copying dipy/align/reslice.py -> build/lib.linux-x86_64-2.7/dipy/align copying dipy/align/__init__.py -> build/lib.linux-x86_64-2.7/dipy/align copying dipy/align/imwarp.py -> build/lib.linux-x86_64-2.7/dipy/align copying dipy/align/imaffine.py -> build/lib.linux-x86_64-2.7/dipy/align copying dipy/align/streamlinear.py -> build/lib.linux-x86_64-2.7/dipy/align creating build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_transforms.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_reslice.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_scalespace.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_imwarp.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_streamlinear.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_vector_fields.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_parzenhist.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_crosscorr.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_sumsqdiff.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_imaffine.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_expectmax.py -> build/lib.linux-x86_64-2.7/dipy/align/tests copying dipy/align/tests/test_metrics.py -> build/lib.linux-x86_64-2.7/dipy/align/tests creating build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/gradients.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/subdivide_octahedron.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/profile.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/sphere_stats.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/wavelet.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/onetime.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/rng.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/graph.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/sphere.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/histeq.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/__init__.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/optimize.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/geometry.py -> build/lib.linux-x86_64-2.7/dipy/core copying dipy/core/ndindex.py -> build/lib.linux-x86_64-2.7/dipy/core creating build/lib.linux-x86_64-2.7/dipy/core/tests copying dipy/core/tests/test_gradients.py -> build/lib.linux-x86_64-2.7/dipy/core/tests copying dipy/core/tests/test_optimize.py -> build/lib.linux-x86_64-2.7/dipy/core/tests copying dipy/core/tests/test_geometry.py -> build/lib.linux-x86_64-2.7/dipy/core/tests copying dipy/core/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/core/tests copying dipy/core/tests/test_sphere.py -> build/lib.linux-x86_64-2.7/dipy/core/tests copying dipy/core/tests/test_subdivide_octahedron.py -> build/lib.linux-x86_64-2.7/dipy/core/tests copying dipy/core/tests/test_graph.py -> build/lib.linux-x86_64-2.7/dipy/core/tests copying dipy/core/tests/test_ndindex.py -> build/lib.linux-x86_64-2.7/dipy/core/tests creating build/lib.linux-x86_64-2.7/dipy/direction copying dipy/direction/probabilistic_direction_getter.py -> build/lib.linux-x86_64-2.7/dipy/direction copying dipy/direction/__init__.py -> build/lib.linux-x86_64-2.7/dipy/direction copying dipy/direction/peaks.py -> build/lib.linux-x86_64-2.7/dipy/direction creating build/lib.linux-x86_64-2.7/dipy/direction/tests copying dipy/direction/tests/test_prob_direction_getter.py -> build/lib.linux-x86_64-2.7/dipy/direction/tests copying dipy/direction/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/direction/tests copying dipy/direction/tests/test_peaks.py -> build/lib.linux-x86_64-2.7/dipy/direction/tests creating build/lib.linux-x86_64-2.7/dipy/tracking copying dipy/tracking/_utils.py -> build/lib.linux-x86_64-2.7/dipy/tracking copying dipy/tracking/streamline.py -> build/lib.linux-x86_64-2.7/dipy/tracking copying dipy/tracking/utils.py -> build/lib.linux-x86_64-2.7/dipy/tracking copying dipy/tracking/metrics.py -> build/lib.linux-x86_64-2.7/dipy/tracking copying dipy/tracking/eudx.py -> build/lib.linux-x86_64-2.7/dipy/tracking copying dipy/tracking/learning.py -> build/lib.linux-x86_64-2.7/dipy/tracking copying dipy/tracking/__init__.py -> build/lib.linux-x86_64-2.7/dipy/tracking copying dipy/tracking/life.py -> build/lib.linux-x86_64-2.7/dipy/tracking creating build/lib.linux-x86_64-2.7/dipy/tracking/local copying dipy/tracking/local/localtracking.py -> build/lib.linux-x86_64-2.7/dipy/tracking/local copying dipy/tracking/local/__init__.py -> build/lib.linux-x86_64-2.7/dipy/tracking/local creating build/lib.linux-x86_64-2.7/dipy/tracking/local/tests copying dipy/tracking/local/tests/test_local_tracking.py -> build/lib.linux-x86_64-2.7/dipy/tracking/local/tests copying dipy/tracking/local/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/tracking/local/tests copying dipy/tracking/local/tests/test_tissue_classifier.py -> build/lib.linux-x86_64-2.7/dipy/tracking/local/tests creating build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_utils.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_track_volumes.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_life.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_learning.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_fbc.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_distances.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_localtrack.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_propagation.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_metrics.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests copying dipy/tracking/tests/test_streamline.py -> build/lib.linux-x86_64-2.7/dipy/tracking/tests creating build/lib.linux-x86_64-2.7/dipy/tracking/benchmarks copying dipy/tracking/benchmarks/bench_streamline.py -> build/lib.linux-x86_64-2.7/dipy/tracking/benchmarks copying dipy/tracking/benchmarks/__init__.py -> build/lib.linux-x86_64-2.7/dipy/tracking/benchmarks creating build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/shore.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/odf.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/cross_validation.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/gqi.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/csdeconv.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/multi_voxel.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/sfm.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/ivim.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/cache.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/dki_micro.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/dti.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/utils.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/dsi.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/dki.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/shm.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/mapmri.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/__init__.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/fwdti.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/peaks.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/base.py -> build/lib.linux-x86_64-2.7/dipy/reconst copying dipy/reconst/interpolate.py -> build/lib.linux-x86_64-2.7/dipy/reconst creating build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks copying dipy/reconst/benchmarks/bench_bounding_box.py -> build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks copying dipy/reconst/benchmarks/bench_peaks.py -> build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks copying dipy/reconst/benchmarks/bench_csd.py -> build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks copying dipy/reconst/benchmarks/bench_vec_val_sum.py -> build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks copying dipy/reconst/benchmarks/__init__.py -> build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks copying dipy/reconst/benchmarks/bench_squash.py -> build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks creating build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_shore_odf.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_dki_micro.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_fwdti.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_gqi.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_interpolate.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_dsi.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_multi_voxel.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_shore_metrics.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_mapmri.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_dti.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_shm.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_peak_finding.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_dsi_deconv.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_peakdf.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_vec_val_vect.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_cross_validation.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_sfm.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_csdeconv.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_ivim.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_reco_utils.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_dki.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_dsi_metrics.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_cache.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_odf.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests copying dipy/reconst/tests/test_shore.py -> build/lib.linux-x86_64-2.7/dipy/reconst/tests creating build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/gradients.py -> build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/utils.py -> build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/vtk.py -> build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/dpy.py -> build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/pickles.py -> build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/image.py -> build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/__init__.py -> build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/trackvis.py -> build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/peaks.py -> build/lib.linux-x86_64-2.7/dipy/io copying dipy/io/bvectxt.py -> build/lib.linux-x86_64-2.7/dipy/io creating build/lib.linux-x86_64-2.7/dipy/io/tests copying dipy/io/tests/test_io_gradients.py -> build/lib.linux-x86_64-2.7/dipy/io/tests copying dipy/io/tests/test_dpy.py -> build/lib.linux-x86_64-2.7/dipy/io/tests copying dipy/io/tests/test_io_peaks.py -> build/lib.linux-x86_64-2.7/dipy/io/tests copying dipy/io/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/io/tests copying dipy/io/tests/test_bvectxt.py -> build/lib.linux-x86_64-2.7/dipy/io/tests copying dipy/io/tests/test_io.py -> build/lib.linux-x86_64-2.7/dipy/io/tests creating build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/fvtk.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/interactor.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/colormap.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/utils.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/actor.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/window.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/ui.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/__init__.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/regtools.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/projections.py -> build/lib.linux-x86_64-2.7/dipy/viz copying dipy/viz/widget.py -> build/lib.linux-x86_64-2.7/dipy/viz creating build/lib.linux-x86_64-2.7/dipy/viz/tests copying dipy/viz/tests/test_utils.py -> build/lib.linux-x86_64-2.7/dipy/viz/tests copying dipy/viz/tests/test_actors.py -> build/lib.linux-x86_64-2.7/dipy/viz/tests copying dipy/viz/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/viz/tests copying dipy/viz/tests/test_widgets.py -> build/lib.linux-x86_64-2.7/dipy/viz/tests copying dipy/viz/tests/test_window.py -> build/lib.linux-x86_64-2.7/dipy/viz/tests copying dipy/viz/tests/test_interactor.py -> build/lib.linux-x86_64-2.7/dipy/viz/tests copying dipy/viz/tests/test_fvtk.py -> build/lib.linux-x86_64-2.7/dipy/viz/tests copying dipy/viz/tests/test_regtools.py -> build/lib.linux-x86_64-2.7/dipy/viz/tests copying dipy/viz/tests/test_ui.py -> build/lib.linux-x86_64-2.7/dipy/viz/tests creating build/lib.linux-x86_64-2.7/dipy/testing copying dipy/testing/decorators.py -> build/lib.linux-x86_64-2.7/dipy/testing copying dipy/testing/spherepoints.py -> build/lib.linux-x86_64-2.7/dipy/testing copying dipy/testing/__init__.py -> build/lib.linux-x86_64-2.7/dipy/testing copying dipy/testing/memory.py -> build/lib.linux-x86_64-2.7/dipy/testing creating build/lib.linux-x86_64-2.7/dipy/testing/tests copying dipy/testing/tests/test_decorators.py -> build/lib.linux-x86_64-2.7/dipy/testing/tests copying dipy/testing/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/testing/tests copying dipy/testing/tests/test_memory.py -> build/lib.linux-x86_64-2.7/dipy/testing/tests creating build/lib.linux-x86_64-2.7/dipy/boots copying dipy/boots/resampling.py -> build/lib.linux-x86_64-2.7/dipy/boots copying dipy/boots/__init__.py -> build/lib.linux-x86_64-2.7/dipy/boots creating build/lib.linux-x86_64-2.7/dipy/data copying dipy/data/__init__.py -> build/lib.linux-x86_64-2.7/dipy/data copying dipy/data/fetcher.py -> build/lib.linux-x86_64-2.7/dipy/data creating build/lib.linux-x86_64-2.7/dipy/utils copying dipy/utils/arrfuncs.py -> build/lib.linux-x86_64-2.7/dipy/utils copying dipy/utils/tripwire.py -> build/lib.linux-x86_64-2.7/dipy/utils copying dipy/utils/six.py -> build/lib.linux-x86_64-2.7/dipy/utils copying dipy/utils/_importlib.py -> build/lib.linux-x86_64-2.7/dipy/utils copying dipy/utils/__init__.py -> build/lib.linux-x86_64-2.7/dipy/utils copying dipy/utils/optpkg.py -> build/lib.linux-x86_64-2.7/dipy/utils package init file 'dipy/data/tests/__init__.py' not found (or not a regular file) creating build/lib.linux-x86_64-2.7/dipy/data/tests copying dipy/data/tests/test_data.py -> build/lib.linux-x86_64-2.7/dipy/data/tests copying dipy/data/tests/test_fetcher.py -> build/lib.linux-x86_64-2.7/dipy/data/tests creating build/lib.linux-x86_64-2.7/dipy/utils/tests copying dipy/utils/tests/test_omp.py -> build/lib.linux-x86_64-2.7/dipy/utils/tests copying dipy/utils/tests/test_tripwire.py -> build/lib.linux-x86_64-2.7/dipy/utils/tests copying dipy/utils/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/utils/tests copying dipy/utils/tests/test_arrfuncs.py -> build/lib.linux-x86_64-2.7/dipy/utils/tests creating build/lib.linux-x86_64-2.7/dipy/fixes copying dipy/fixes/argparse.py -> build/lib.linux-x86_64-2.7/dipy/fixes copying dipy/fixes/scipy.py -> build/lib.linux-x86_64-2.7/dipy/fixes copying dipy/fixes/__init__.py -> build/lib.linux-x86_64-2.7/dipy/fixes creating build/lib.linux-x86_64-2.7/dipy/external copying dipy/external/__init__.py -> build/lib.linux-x86_64-2.7/dipy/external copying dipy/external/fsl.py -> build/lib.linux-x86_64-2.7/dipy/external creating build/lib.linux-x86_64-2.7/dipy/external/tests copying dipy/external/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/external/tests creating build/lib.linux-x86_64-2.7/dipy/segment copying dipy/segment/tissue.py -> build/lib.linux-x86_64-2.7/dipy/segment copying dipy/segment/mask.py -> build/lib.linux-x86_64-2.7/dipy/segment copying dipy/segment/quickbundles.py -> build/lib.linux-x86_64-2.7/dipy/segment copying dipy/segment/metric.py -> build/lib.linux-x86_64-2.7/dipy/segment copying dipy/segment/clustering.py -> build/lib.linux-x86_64-2.7/dipy/segment copying dipy/segment/__init__.py -> build/lib.linux-x86_64-2.7/dipy/segment copying dipy/segment/threshold.py -> build/lib.linux-x86_64-2.7/dipy/segment creating build/lib.linux-x86_64-2.7/dipy/segment/benchmarks copying dipy/segment/benchmarks/bench_quickbundles.py -> build/lib.linux-x86_64-2.7/dipy/segment/benchmarks copying dipy/segment/benchmarks/__init__.py -> build/lib.linux-x86_64-2.7/dipy/segment/benchmarks creating build/lib.linux-x86_64-2.7/dipy/segment/tests copying dipy/segment/tests/test_mask.py -> build/lib.linux-x86_64-2.7/dipy/segment/tests copying dipy/segment/tests/test_feature.py -> build/lib.linux-x86_64-2.7/dipy/segment/tests copying dipy/segment/tests/test_metric.py -> build/lib.linux-x86_64-2.7/dipy/segment/tests copying dipy/segment/tests/test_qb.py -> build/lib.linux-x86_64-2.7/dipy/segment/tests copying dipy/segment/tests/test_quickbundles.py -> build/lib.linux-x86_64-2.7/dipy/segment/tests copying dipy/segment/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/segment/tests copying dipy/segment/tests/test_clustering.py -> build/lib.linux-x86_64-2.7/dipy/segment/tests copying dipy/segment/tests/test_adjustment.py -> build/lib.linux-x86_64-2.7/dipy/segment/tests copying dipy/segment/tests/test_mrf.py -> build/lib.linux-x86_64-2.7/dipy/segment/tests creating build/lib.linux-x86_64-2.7/dipy/sims copying dipy/sims/__init__.py -> build/lib.linux-x86_64-2.7/dipy/sims copying dipy/sims/phantom.py -> build/lib.linux-x86_64-2.7/dipy/sims copying dipy/sims/voxel.py -> build/lib.linux-x86_64-2.7/dipy/sims creating build/lib.linux-x86_64-2.7/dipy/sims/tests copying dipy/sims/tests/test_voxel.py -> build/lib.linux-x86_64-2.7/dipy/sims/tests copying dipy/sims/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/sims/tests copying dipy/sims/tests/test_phantom.py -> build/lib.linux-x86_64-2.7/dipy/sims/tests creating build/lib.linux-x86_64-2.7/dipy/denoise copying dipy/denoise/localpca.py -> build/lib.linux-x86_64-2.7/dipy/denoise copying dipy/denoise/nlmeans.py -> build/lib.linux-x86_64-2.7/dipy/denoise copying dipy/denoise/noise_estimate.py -> build/lib.linux-x86_64-2.7/dipy/denoise copying dipy/denoise/adaptive_soft_matching.py -> build/lib.linux-x86_64-2.7/dipy/denoise copying dipy/denoise/non_local_means.py -> build/lib.linux-x86_64-2.7/dipy/denoise copying dipy/denoise/__init__.py -> build/lib.linux-x86_64-2.7/dipy/denoise creating build/lib.linux-x86_64-2.7/dipy/denoise/tests copying dipy/denoise/tests/test_lpca.py -> build/lib.linux-x86_64-2.7/dipy/denoise/tests copying dipy/denoise/tests/test_nlmeans.py -> build/lib.linux-x86_64-2.7/dipy/denoise/tests copying dipy/denoise/tests/test_non_local_means.py -> build/lib.linux-x86_64-2.7/dipy/denoise/tests copying dipy/denoise/tests/test_denoise.py -> build/lib.linux-x86_64-2.7/dipy/denoise/tests copying dipy/denoise/tests/test_ascm.py -> build/lib.linux-x86_64-2.7/dipy/denoise/tests copying dipy/denoise/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/denoise/tests copying dipy/denoise/tests/test_kernel.py -> build/lib.linux-x86_64-2.7/dipy/denoise/tests copying dipy/denoise/tests/test_noise_estimate.py -> build/lib.linux-x86_64-2.7/dipy/denoise/tests creating build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/mask.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/flow_runner.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/reconst.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/segment.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/__init__.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/docstring_parser.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/combined_workflow.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/multi_io.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/denoise.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/workflow.py -> build/lib.linux-x86_64-2.7/dipy/workflows copying dipy/workflows/base.py -> build/lib.linux-x86_64-2.7/dipy/workflows creating build/lib.linux-x86_64-2.7/dipy/workflows/tests copying dipy/workflows/tests/workflow_tests_utils.py -> build/lib.linux-x86_64-2.7/dipy/workflows/tests copying dipy/workflows/tests/test_workflow.py -> build/lib.linux-x86_64-2.7/dipy/workflows/tests copying dipy/workflows/tests/test_docstring_parser.py -> build/lib.linux-x86_64-2.7/dipy/workflows/tests copying dipy/workflows/tests/test_masking.py -> build/lib.linux-x86_64-2.7/dipy/workflows/tests copying dipy/workflows/tests/test_segment.py -> build/lib.linux-x86_64-2.7/dipy/workflows/tests copying dipy/workflows/tests/test_reconst_dti.py -> build/lib.linux-x86_64-2.7/dipy/workflows/tests copying dipy/workflows/tests/__init__.py -> build/lib.linux-x86_64-2.7/dipy/workflows/tests copying dipy/workflows/tests/test_reconst_csa_csd.py -> build/lib.linux-x86_64-2.7/dipy/workflows/tests copying dipy/workflows/tests/test_iap.py -> build/lib.linux-x86_64-2.7/dipy/workflows/tests creating build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/small_25.bval -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_button_panel.log.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_line_slider_2d.pkl -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/func_discrete.nii.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_custom_interactor_style_events.log.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_disk_slider_2d.pkl -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/C.npy -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/cb_2.npz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/repulsion200.npz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_piesno.nii.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/small_64D.bvals.npy -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/55dir_grad.bval -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/eg_3voxels.pkl -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/small_64D.nii -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/small_101D.bval -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/dsi515_b_table.txt -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/grad_514.txt -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/sphere_grad.txt -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/evenly_distributed_sphere_642.npz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/gtab_isbi2013_2shell.txt -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/circle.npy -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_textbox.pkl -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/evenly_distributed_sphere_724.npz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/repulsion724.npz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/ascm_out_test.nii.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/small_64D.gradients.npy -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/repulsion100.npz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/gtab_3shell.txt -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_disk_slider_2d.log.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/aniso_vox.nii.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/dsi4169_b_table.txt -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/small_25.nii.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/S0_10slices.nii.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/C3.pkl.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/tracks300.trk -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/C1.pkl.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/evenly_distributed_sphere_362.npz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_textbox.log.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_button_and_slider_widgets.log.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_button_panel.pkl -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/fib1.pkl.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/small_25.bvec -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_file_select_menu_2d.log.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/gtab_taiwan_dsi.txt -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_line_slider_2d.log.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/t1_coronal_slice.npy -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/dipy_colormaps.json -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/small_101D.nii.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/55dir_grad.bvec -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/fib2.pkl.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/ScannerVectors_GQI101.txt -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/life_matlab_rmse.npy -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/life_matlab_weights.npy -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/fib0.pkl.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/func_coef.nii.gz -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/small_101D.bvec -> build/lib.linux-x86_64-2.7/dipy/data/files copying dipy/data/files/test_ui_file_select_menu_2d.pkl -> build/lib.linux-x86_64-2.7/dipy/data/files package init file 'dipy/data/tests/__init__.py' not found (or not a regular file) running build_ext x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/usr/include/python2.7 -c test.c -o test.o -msse2 -mfpmath=sse x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security test.o -o libtestlib.so x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/usr/include/python2.7 -c test.c -o test.o -fopenmp test.c:1:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. Flags ['-fopenmp', '-fopenmp'] omitted because of compile or link error cythoning dipy/reconst/peak_direction_getter.pyx to dipy/reconst/peak_direction_getter.c warning: dipy/reconst/peak_direction_getter.pyx:57:4: Overriding cdef method with def method. building 'dipy.reconst.peak_direction_getter' extension creating build/temp.linux-x86_64-2.7 creating build/temp.linux-x86_64-2.7/dipy creating build/temp.linux-x86_64-2.7/dipy/reconst x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/reconst/peak_direction_getter.c -o build/temp.linux-x86_64-2.7/dipy/reconst/peak_direction_getter.o -msse2 -mfpmath=sse In file included from dipy/reconst/peak_direction_getter.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/reconst/peak_direction_getter.o -o build/lib.linux-x86_64-2.7/dipy/reconst/peak_direction_getter.so cythoning dipy/reconst/recspeed.pyx to dipy/reconst/recspeed.c warning: dipy/reconst/recspeed.pyx:570:31: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/reconst/recspeed.pyx:570:46: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/reconst/recspeed.pyx:570:59: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. building 'dipy.reconst.recspeed' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/reconst/recspeed.c -o build/temp.linux-x86_64-2.7/dipy/reconst/recspeed.o -msse2 -mfpmath=sse In file included from dipy/reconst/recspeed.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/reconst/recspeed.o -o build/lib.linux-x86_64-2.7/dipy/reconst/recspeed.so cythoning dipy/reconst/vec_val_sum.pyx to dipy/reconst/vec_val_sum.c building 'dipy.reconst.vec_val_sum' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/reconst/vec_val_sum.c -o build/temp.linux-x86_64-2.7/dipy/reconst/vec_val_sum.o -msse2 -mfpmath=sse In file included from dipy/reconst/vec_val_sum.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/reconst/vec_val_sum.o -o build/lib.linux-x86_64-2.7/dipy/reconst/vec_val_sum.so cythoning dipy/reconst/quick_squash.pyx to dipy/reconst/quick_squash.c building 'dipy.reconst.quick_squash' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/reconst/quick_squash.c -o build/temp.linux-x86_64-2.7/dipy/reconst/quick_squash.o -msse2 -mfpmath=sse In file included from dipy/reconst/quick_squash.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/reconst/quick_squash.o -o build/lib.linux-x86_64-2.7/dipy/reconst/quick_squash.so cythoning dipy/tracking/distances.pyx to dipy/tracking/distances.c warning: dipy/tracking/distances.pyx:246:14: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:246:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:246:40: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:246:53: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:247:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:247:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:248:17: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:248:25: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:248:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:248:41: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:249:17: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:249:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:249:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:416:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:416:31: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:416:40: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:512:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:512:31: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:512:40: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:577:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:577:31: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:577:40: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:615:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:615:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:653:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:653:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:741:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:741:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:809:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:809:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:894:14: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:894:21: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:894:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:894:36: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:894:42: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:894:49: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:894:56: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:894:63: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:983:14: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:983:21: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:983:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:983:36: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:983:43: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1048:14: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1048:21: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1048:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1052:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1052:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1175:14: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1175:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1175:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1175:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1203:15: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1203:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1203:25: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1282:14: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1282:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1282:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1299:16: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1299:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1299:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1535:14: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1535:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1535:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1536:15: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1978:15: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:1978:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:2030:15: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:2030:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/distances.pyx:2030:25: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. building 'dipy.tracking.distances' extension creating build/temp.linux-x86_64-2.7/dipy/tracking x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/tracking/distances.c -o build/temp.linux-x86_64-2.7/dipy/tracking/distances.o -msse2 -mfpmath=sse In file included from dipy/tracking/distances.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ dipy/tracking/distances.c:8653:5: warning: variable '__pyx_v_dist_val' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized] default: break; ^~~~~~~ dipy/tracking/distances.c:8663:13: note: uninitialized use occurs here __pyx_r = __pyx_v_dist_val; ^~~~~~~~~~~~~~~~ dipy/tracking/distances.c:8408:44: note: initialize the variable '__pyx_v_dist_val' to silence this warning __pyx_t_5numpy_float32_t __pyx_v_dist_val; ^ = 0.0 2 warnings generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/tracking/distances.o -o build/lib.linux-x86_64-2.7/dipy/tracking/distances.so cythoning dipy/tracking/streamlinespeed.pyx to dipy/tracking/streamlinespeed.c building 'dipy.tracking.streamlinespeed' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/tracking/streamlinespeed.c -o build/temp.linux-x86_64-2.7/dipy/tracking/streamlinespeed.o -msse2 -mfpmath=sse In file included from dipy/tracking/streamlinespeed.c:486: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/tracking/streamlinespeed.o -o build/lib.linux-x86_64-2.7/dipy/tracking/streamlinespeed.so cythoning dipy/tracking/local/localtrack.pyx to dipy/tracking/local/localtrack.c warning: dipy/tracking/local/localtrack.pyx:153:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/local/localtrack.pyx:153:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/local/localtrack.pyx:153:35: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/local/localtrack.pyx:153:46: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. building 'dipy.tracking.local.localtrack' extension creating build/temp.linux-x86_64-2.7/dipy/tracking/local x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/tracking/local/localtrack.c -o build/temp.linux-x86_64-2.7/dipy/tracking/local/localtrack.o -msse2 -mfpmath=sse In file included from dipy/tracking/local/localtrack.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ dipy/tracking/local/localtrack.c:2544:21: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] __pyx_r = (1. / abs(__pyx_v_increment)); ^ dipy/tracking/local/localtrack.c:2544:21: note: use function 'fabs' instead __pyx_r = (1. / abs(__pyx_v_increment)); ^~~ fabs 2 warnings generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/tracking/local/localtrack.o -o build/lib.linux-x86_64-2.7/dipy/tracking/local/localtrack.so cythoning dipy/tracking/local/direction_getter.pyx to dipy/tracking/local/direction_getter.c building 'dipy.tracking.local.direction_getter' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/tracking/local/direction_getter.c -o build/temp.linux-x86_64-2.7/dipy/tracking/local/direction_getter.o -msse2 -mfpmath=sse In file included from dipy/tracking/local/direction_getter.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/tracking/local/direction_getter.o -o build/lib.linux-x86_64-2.7/dipy/tracking/local/direction_getter.so cythoning dipy/tracking/local/tissue_classifier.pyx to dipy/tracking/local/tissue_classifier.c building 'dipy.tracking.local.tissue_classifier' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/tracking/local/tissue_classifier.c -o build/temp.linux-x86_64-2.7/dipy/tracking/local/tissue_classifier.o -msse2 -mfpmath=sse In file included from dipy/tracking/local/tissue_classifier.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/tracking/local/tissue_classifier.o -o build/lib.linux-x86_64-2.7/dipy/tracking/local/tissue_classifier.so cythoning dipy/tracking/local/interpolation.pyx to dipy/tracking/local/interpolation.c building 'dipy.tracking.local.interpolation' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/tracking/local/interpolation.c -o build/temp.linux-x86_64-2.7/dipy/tracking/local/interpolation.o -msse2 -mfpmath=sse In file included from dipy/tracking/local/interpolation.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/tracking/local/interpolation.o -o build/lib.linux-x86_64-2.7/dipy/tracking/local/interpolation.so cythoning dipy/tracking/vox2track.pyx to dipy/tracking/vox2track.c building 'dipy.tracking.vox2track' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/tracking/vox2track.c -o build/temp.linux-x86_64-2.7/dipy/tracking/vox2track.o -msse2 -mfpmath=sse In file included from dipy/tracking/vox2track.c:487: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/tracking/vox2track.o -o build/lib.linux-x86_64-2.7/dipy/tracking/vox2track.so cythoning dipy/tracking/propspeed.pyx to dipy/tracking/propspeed.c warning: dipy/tracking/propspeed.pyx:134:16: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:134:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:135:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:173:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:173:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:173:31: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:306:16: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:306:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:306:45: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:307:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:307:35: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:370:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:437:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:437:31: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:437:46: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/tracking/propspeed.pyx:437:54: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. building 'dipy.tracking.propspeed' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/tracking/propspeed.c -o build/temp.linux-x86_64-2.7/dipy/tracking/propspeed.o -msse2 -mfpmath=sse In file included from dipy/tracking/propspeed.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/tracking/propspeed.o -o build/lib.linux-x86_64-2.7/dipy/tracking/propspeed.so cythoning dipy/tracking/fbcmeasures.pyx to dipy/tracking/fbcmeasures.c building 'dipy.tracking.fbcmeasures' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/tracking/fbcmeasures.c -o build/temp.linux-x86_64-2.7/dipy/tracking/fbcmeasures.o -msse2 -mfpmath=sse In file included from dipy/tracking/fbcmeasures.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from dipy/tracking/fbcmeasures.c:487: src/conditional_omp.h:24:38: warning: control reaches end of non-void function [-Wreturn-type] int omp_test_lock(omp_lock_t *lock) {}; ^ src/conditional_omp.h:27:26: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_num_procs() {}; ^ src/conditional_omp.h:28:28: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_max_threads() {}; ^ 4 warnings generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/tracking/fbcmeasures.o -o build/lib.linux-x86_64-2.7/dipy/tracking/fbcmeasures.so cythoning dipy/segment/cythonutils.pyx to dipy/segment/cythonutils.c building 'dipy.segment.cythonutils' extension creating build/temp.linux-x86_64-2.7/dipy/segment x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/segment/cythonutils.c -o build/temp.linux-x86_64-2.7/dipy/segment/cythonutils.o -msse2 -mfpmath=sse x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/segment/cythonutils.o -o build/lib.linux-x86_64-2.7/dipy/segment/cythonutils.so cythoning dipy/segment/featurespeed.pyx to dipy/segment/featurespeed.c building 'dipy.segment.featurespeed' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/segment/featurespeed.c -o build/temp.linux-x86_64-2.7/dipy/segment/featurespeed.o -msse2 -mfpmath=sse In file included from dipy/segment/featurespeed.c:486: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/segment/featurespeed.o -o build/lib.linux-x86_64-2.7/dipy/segment/featurespeed.so cythoning dipy/segment/metricspeed.pyx to dipy/segment/metricspeed.c building 'dipy.segment.metricspeed' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/segment/metricspeed.c -o build/temp.linux-x86_64-2.7/dipy/segment/metricspeed.o -msse2 -mfpmath=sse In file included from dipy/segment/metricspeed.c:486: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/segment/metricspeed.o -o build/lib.linux-x86_64-2.7/dipy/segment/metricspeed.so cythoning dipy/segment/clusteringspeed.pyx to dipy/segment/clusteringspeed.c building 'dipy.segment.clusteringspeed' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/segment/clusteringspeed.c -o build/temp.linux-x86_64-2.7/dipy/segment/clusteringspeed.o -msse2 -mfpmath=sse In file included from dipy/segment/clusteringspeed.c:486: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/segment/clusteringspeed.o -o build/lib.linux-x86_64-2.7/dipy/segment/clusteringspeed.so cythoning dipy/segment/clustering_algorithms.pyx to dipy/segment/clustering_algorithms.c building 'dipy.segment.clustering_algorithms' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/segment/clustering_algorithms.c -o build/temp.linux-x86_64-2.7/dipy/segment/clustering_algorithms.o -msse2 -mfpmath=sse In file included from dipy/segment/clustering_algorithms.c:486: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/segment/clustering_algorithms.o -o build/lib.linux-x86_64-2.7/dipy/segment/clustering_algorithms.so cythoning dipy/segment/mrf.pyx to dipy/segment/mrf.c building 'dipy.segment.mrf' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/segment/mrf.c -o build/temp.linux-x86_64-2.7/dipy/segment/mrf.o -msse2 -mfpmath=sse In file included from dipy/segment/mrf.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/segment/mrf.o -o build/lib.linux-x86_64-2.7/dipy/segment/mrf.so cythoning dipy/denoise/denspeed.pyx to dipy/denoise/denspeed.c building 'dipy.denoise.denspeed' extension creating build/temp.linux-x86_64-2.7/dipy/denoise x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/denoise/denspeed.c -o build/temp.linux-x86_64-2.7/dipy/denoise/denspeed.o -msse2 -mfpmath=sse In file included from dipy/denoise/denspeed.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from dipy/denoise/denspeed.c:487: src/conditional_omp.h:24:38: warning: control reaches end of non-void function [-Wreturn-type] int omp_test_lock(omp_lock_t *lock) {}; ^ src/conditional_omp.h:27:26: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_num_procs() {}; ^ src/conditional_omp.h:28:28: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_max_threads() {}; ^ 4 warnings generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/denoise/denspeed.o -o build/lib.linux-x86_64-2.7/dipy/denoise/denspeed.so cythoning dipy/denoise/pca_noise_estimate.pyx to dipy/denoise/pca_noise_estimate.c building 'dipy.denoise.pca_noise_estimate' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/denoise/pca_noise_estimate.c -o build/temp.linux-x86_64-2.7/dipy/denoise/pca_noise_estimate.o -msse2 -mfpmath=sse In file included from dipy/denoise/pca_noise_estimate.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/denoise/pca_noise_estimate.o -o build/lib.linux-x86_64-2.7/dipy/denoise/pca_noise_estimate.so cythoning dipy/denoise/nlmeans_block.pyx to dipy/denoise/nlmeans_block.c building 'dipy.denoise.nlmeans_block' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/denoise/nlmeans_block.c -o build/temp.linux-x86_64-2.7/dipy/denoise/nlmeans_block.o -msse2 -mfpmath=sse x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/denoise/nlmeans_block.o -o build/lib.linux-x86_64-2.7/dipy/denoise/nlmeans_block.so cythoning dipy/denoise/enhancement_kernel.pyx to dipy/denoise/enhancement_kernel.c building 'dipy.denoise.enhancement_kernel' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/denoise/enhancement_kernel.c -o build/temp.linux-x86_64-2.7/dipy/denoise/enhancement_kernel.o -msse2 -mfpmath=sse In file included from dipy/denoise/enhancement_kernel.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/denoise/enhancement_kernel.o -o build/lib.linux-x86_64-2.7/dipy/denoise/enhancement_kernel.so cythoning dipy/denoise/shift_twist_convolution.pyx to dipy/denoise/shift_twist_convolution.c building 'dipy.denoise.shift_twist_convolution' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/denoise/shift_twist_convolution.c -o build/temp.linux-x86_64-2.7/dipy/denoise/shift_twist_convolution.o -msse2 -mfpmath=sse In file included from dipy/denoise/shift_twist_convolution.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from dipy/denoise/shift_twist_convolution.c:487: src/conditional_omp.h:24:38: warning: control reaches end of non-void function [-Wreturn-type] int omp_test_lock(omp_lock_t *lock) {}; ^ src/conditional_omp.h:27:26: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_num_procs() {}; ^ src/conditional_omp.h:28:28: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_max_threads() {}; ^ 4 warnings generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/denoise/shift_twist_convolution.o -o build/lib.linux-x86_64-2.7/dipy/denoise/shift_twist_convolution.so cythoning dipy/align/vector_fields.pyx to dipy/align/vector_fields.c building 'dipy.align.vector_fields' extension creating build/temp.linux-x86_64-2.7/dipy/align x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/align/vector_fields.c -o build/temp.linux-x86_64-2.7/dipy/align/vector_fields.o -msse2 -mfpmath=sse In file included from dipy/align/vector_fields.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/align/vector_fields.o -o build/lib.linux-x86_64-2.7/dipy/align/vector_fields.so cythoning dipy/align/sumsqdiff.pyx to dipy/align/sumsqdiff.c building 'dipy.align.sumsqdiff' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/align/sumsqdiff.c -o build/temp.linux-x86_64-2.7/dipy/align/sumsqdiff.o -msse2 -mfpmath=sse In file included from dipy/align/sumsqdiff.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/align/sumsqdiff.o -o build/lib.linux-x86_64-2.7/dipy/align/sumsqdiff.so cythoning dipy/align/expectmax.pyx to dipy/align/expectmax.c building 'dipy.align.expectmax' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/align/expectmax.c -o build/temp.linux-x86_64-2.7/dipy/align/expectmax.o -msse2 -mfpmath=sse In file included from dipy/align/expectmax.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/align/expectmax.o -o build/lib.linux-x86_64-2.7/dipy/align/expectmax.so cythoning dipy/align/crosscorr.pyx to dipy/align/crosscorr.c building 'dipy.align.crosscorr' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/align/crosscorr.c -o build/temp.linux-x86_64-2.7/dipy/align/crosscorr.o -msse2 -mfpmath=sse In file included from dipy/align/crosscorr.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/align/crosscorr.o -o build/lib.linux-x86_64-2.7/dipy/align/crosscorr.so cythoning dipy/align/bundlemin.pyx to dipy/align/bundlemin.c warning: dipy/align/bundlemin.pyx:288:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/align/bundlemin.pyx:288:31: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: dipy/align/bundlemin.pyx:288:40: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. building 'dipy.align.bundlemin' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/align/bundlemin.c -o build/temp.linux-x86_64-2.7/dipy/align/bundlemin.o -msse2 -mfpmath=sse In file included from dipy/align/bundlemin.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from dipy/align/bundlemin.c:487: src/conditional_omp.h:24:38: warning: control reaches end of non-void function [-Wreturn-type] int omp_test_lock(omp_lock_t *lock) {}; ^ src/conditional_omp.h:27:26: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_num_procs() {}; ^ src/conditional_omp.h:28:28: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_max_threads() {}; ^ 4 warnings generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/align/bundlemin.o -o build/lib.linux-x86_64-2.7/dipy/align/bundlemin.so cythoning dipy/align/transforms.pyx to dipy/align/transforms.c building 'dipy.align.transforms' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/align/transforms.c -o build/temp.linux-x86_64-2.7/dipy/align/transforms.o -msse2 -mfpmath=sse In file included from dipy/align/transforms.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/align/transforms.o -o build/lib.linux-x86_64-2.7/dipy/align/transforms.so cythoning dipy/align/parzenhist.pyx to dipy/align/parzenhist.c building 'dipy.align.parzenhist' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/align/parzenhist.c -o build/temp.linux-x86_64-2.7/dipy/align/parzenhist.o -msse2 -mfpmath=sse In file included from dipy/align/parzenhist.c:485: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 1 warning generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/align/parzenhist.o -o build/lib.linux-x86_64-2.7/dipy/align/parzenhist.so cythoning dipy/utils/omp.pyx to dipy/utils/omp.c building 'dipy.utils.omp' extension creating build/temp.linux-x86_64-2.7/dipy/utils x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -Ibuild -I/usr/include/python2.7 -c dipy/utils/omp.c -o build/temp.linux-x86_64-2.7/dipy/utils/omp.o -msse2 -mfpmath=sse In file included from dipy/utils/omp.c:482: src/conditional_omp.h:24:38: warning: control reaches end of non-void function [-Wreturn-type] int omp_test_lock(omp_lock_t *lock) {}; ^ src/conditional_omp.h:27:26: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_num_procs() {}; ^ src/conditional_omp.h:28:28: warning: control reaches end of non-void function [-Wreturn-type] int omp_get_max_threads() {}; ^ 3 warnings generated. x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/dipy/utils/omp.o -o build/lib.linux-x86_64-2.7/dipy/utils/omp.so running build_scripts creating build/scripts-2.7 copying and adjusting bin/dipy_reconst_dti -> build/scripts-2.7 copying and adjusting bin/dipy_mask -> build/scripts-2.7 copying and adjusting bin/dipy_nlmeans -> build/scripts-2.7 copying and adjusting bin/dipy_reconst_dti_restore -> build/scripts-2.7 copying and adjusting bin/dipy_reconst_csd -> build/scripts-2.7 copying and adjusting bin/dipy_reconst_csa -> build/scripts-2.7 copying and adjusting bin/dipy_median_otsu -> build/scripts-2.7 changing mode of build/scripts-2.7/dipy_reconst_dti from 664 to 775 changing mode of build/scripts-2.7/dipy_mask from 664 to 775 changing mode of build/scripts-2.7/dipy_nlmeans from 664 to 775 changing mode of build/scripts-2.7/dipy_reconst_dti_restore from 664 to 775 changing mode of build/scripts-2.7/dipy_reconst_csd from 664 to 775 changing mode of build/scripts-2.7/dipy_reconst_csa from 664 to 775 changing mode of build/scripts-2.7/dipy_median_otsu from 664 to 775 echo "backend : Agg" >| build/matplotlibrc make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' : # Do not test just after build, lets install and then test make[1]: Leaving directory '/<>' fakeroot debian/rules binary-arch dh --buildsystem=python_distutils binary-arch --with python2 dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_testroot -a -O--buildsystem=python_distutils dh_prep -a -O--buildsystem=python_distutils debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install dh_auto_install: Compatibility levels before 9 are deprecated (level 7 in use) python setup.py install --force --root=/<>/debian/tmp --no-compile -O0 --install-layout=deb running install running build running build_py package init file 'dipy/data/tests/__init__.py' not found (or not a regular file) package init file 'dipy/data/tests/__init__.py' not found (or not a regular file) running build_ext x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/usr/include/python2.7 -c test.c -o test.o -msse2 -mfpmath=sse x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security test.o -o libtestlib.so x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-jgBwco/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/usr/include/python2.7 -c test.c -o test.o -fopenmp test.c:1:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. Flags ['-fopenmp', '-fopenmp'] omitted because of compile or link error skipping 'dipy/reconst/peak_direction_getter.c' Cython extension (up-to-date) skipping 'dipy/reconst/recspeed.c' Cython extension (up-to-date) skipping 'dipy/reconst/vec_val_sum.c' Cython extension (up-to-date) skipping 'dipy/reconst/quick_squash.c' Cython extension (up-to-date) skipping 'dipy/tracking/distances.c' Cython extension (up-to-date) skipping 'dipy/tracking/streamlinespeed.c' Cython extension (up-to-date) skipping 'dipy/tracking/local/localtrack.c' Cython extension (up-to-date) skipping 'dipy/tracking/local/direction_getter.c' Cython extension (up-to-date) skipping 'dipy/tracking/local/tissue_classifier.c' Cython extension (up-to-date) skipping 'dipy/tracking/local/interpolation.c' Cython extension (up-to-date) skipping 'dipy/tracking/vox2track.c' Cython extension (up-to-date) skipping 'dipy/tracking/propspeed.c' Cython extension (up-to-date) skipping 'dipy/tracking/fbcmeasures.c' Cython extension (up-to-date) skipping 'dipy/segment/cythonutils.c' Cython extension (up-to-date) skipping 'dipy/segment/featurespeed.c' Cython extension (up-to-date) skipping 'dipy/segment/metricspeed.c' Cython extension (up-to-date) skipping 'dipy/segment/clusteringspeed.c' Cython extension (up-to-date) skipping 'dipy/segment/clustering_algorithms.c' Cython extension (up-to-date) skipping 'dipy/segment/mrf.c' Cython extension (up-to-date) skipping 'dipy/denoise/denspeed.c' Cython extension (up-to-date) skipping 'dipy/denoise/pca_noise_estimate.c' Cython extension (up-to-date) skipping 'dipy/denoise/nlmeans_block.c' Cython extension (up-to-date) skipping 'dipy/denoise/enhancement_kernel.c' Cython extension (up-to-date) skipping 'dipy/denoise/shift_twist_convolution.c' Cython extension (up-to-date) skipping 'dipy/align/vector_fields.c' Cython extension (up-to-date) skipping 'dipy/align/sumsqdiff.c' Cython extension (up-to-date) skipping 'dipy/align/expectmax.c' Cython extension (up-to-date) skipping 'dipy/align/crosscorr.c' Cython extension (up-to-date) skipping 'dipy/align/bundlemin.c' Cython extension (up-to-date) skipping 'dipy/align/transforms.c' Cython extension (up-to-date) skipping 'dipy/align/parzenhist.c' Cython extension (up-to-date) skipping 'dipy/utils/omp.c' Cython extension (up-to-date) running build_scripts running install_lib creating /<>/debian/tmp creating /<>/debian/tmp/usr creating /<>/debian/tmp/usr/lib creating /<>/debian/tmp/usr/lib/python2.7 creating /<>/debian/tmp/usr/lib/python2.7/dist-packages creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/fvtk.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/interactor.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/colormap.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/utils.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/actor.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/window.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/ui.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/tests/test_utils.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/tests/test_actors.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/tests/test_widgets.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/tests/test_window.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/tests/test_interactor.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/tests/test_fvtk.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/tests/test_regtools.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/tests/test_ui.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz/tests copying build/lib.linux-x86_64-2.7/dipy/viz/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/regtools.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/projections.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/viz/widget.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/viz copying build/lib.linux-x86_64-2.7/dipy/pkg_info.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/mask.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/flow_runner.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/reconst.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/segment.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/tests/workflow_tests_utils.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/tests/test_workflow.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/tests/test_docstring_parser.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/tests/test_masking.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/tests/test_segment.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/tests/test_reconst_dti.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/tests/test_reconst_csa_csd.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/tests/test_iap.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows/tests copying build/lib.linux-x86_64-2.7/dipy/workflows/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/docstring_parser.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/combined_workflow.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/multi_io.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/denoise.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/workflow.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows copying build/lib.linux-x86_64-2.7/dipy/workflows/base.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/workflows creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/small_25.bval -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_button_panel.log.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_line_slider_2d.pkl -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/func_discrete.nii.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_custom_interactor_style_events.log.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_disk_slider_2d.pkl -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/C.npy -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/cb_2.npz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/repulsion200.npz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_piesno.nii.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/small_64D.bvals.npy -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/55dir_grad.bval -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/eg_3voxels.pkl -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/small_64D.nii -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/small_101D.bval -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/dsi515_b_table.txt -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/grad_514.txt -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/sphere_grad.txt -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/evenly_distributed_sphere_642.npz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/gtab_isbi2013_2shell.txt -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/circle.npy -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_textbox.pkl -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/evenly_distributed_sphere_724.npz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/repulsion724.npz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/ascm_out_test.nii.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/small_64D.gradients.npy -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/repulsion100.npz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/gtab_3shell.txt -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_disk_slider_2d.log.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/aniso_vox.nii.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/dsi4169_b_table.txt -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/small_25.nii.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/S0_10slices.nii.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/C3.pkl.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/tracks300.trk -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/C1.pkl.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/evenly_distributed_sphere_362.npz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_textbox.log.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_button_and_slider_widgets.log.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_button_panel.pkl -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/fib1.pkl.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/small_25.bvec -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_file_select_menu_2d.log.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/gtab_taiwan_dsi.txt -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_line_slider_2d.log.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/t1_coronal_slice.npy -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/dipy_colormaps.json -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/small_101D.nii.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/55dir_grad.bvec -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/fib2.pkl.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/ScannerVectors_GQI101.txt -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/life_matlab_rmse.npy -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/life_matlab_weights.npy -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/fib0.pkl.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/func_coef.nii.gz -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/small_101D.bvec -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files copying build/lib.linux-x86_64-2.7/dipy/data/files/test_ui_file_select_menu_2d.pkl -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/files creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/tests copying build/lib.linux-x86_64-2.7/dipy/data/tests/test_data.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/tests copying build/lib.linux-x86_64-2.7/dipy/data/tests/test_fetcher.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data/tests copying build/lib.linux-x86_64-2.7/dipy/data/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data copying build/lib.linux-x86_64-2.7/dipy/data/fetcher.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/data creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/scalespace.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/expectmax.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/parzenhist.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/metrics.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/reslice.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/vector_fields.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/bundlemin.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_transforms.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_reslice.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_scalespace.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_imwarp.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_streamlinear.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_vector_fields.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_parzenhist.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_crosscorr.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_sumsqdiff.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_imaffine.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_expectmax.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/tests/test_metrics.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align/tests copying build/lib.linux-x86_64-2.7/dipy/align/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/imwarp.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/imaffine.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/streamlinear.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/crosscorr.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/sumsqdiff.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align copying build/lib.linux-x86_64-2.7/dipy/align/transforms.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/align creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/external creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/external/tests copying build/lib.linux-x86_64-2.7/dipy/external/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/external/tests copying build/lib.linux-x86_64-2.7/dipy/external/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/external copying build/lib.linux-x86_64-2.7/dipy/external/fsl.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/external creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/localpca.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/nlmeans.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/noise_estimate.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/shift_twist_convolution.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/adaptive_soft_matching.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/non_local_means.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/denspeed.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise/tests copying build/lib.linux-x86_64-2.7/dipy/denoise/tests/test_lpca.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise/tests copying build/lib.linux-x86_64-2.7/dipy/denoise/tests/test_nlmeans.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise/tests copying build/lib.linux-x86_64-2.7/dipy/denoise/tests/test_non_local_means.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise/tests copying build/lib.linux-x86_64-2.7/dipy/denoise/tests/test_denoise.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise/tests copying build/lib.linux-x86_64-2.7/dipy/denoise/tests/test_ascm.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise/tests copying build/lib.linux-x86_64-2.7/dipy/denoise/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise/tests copying build/lib.linux-x86_64-2.7/dipy/denoise/tests/test_kernel.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise/tests copying build/lib.linux-x86_64-2.7/dipy/denoise/tests/test_noise_estimate.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise/tests copying build/lib.linux-x86_64-2.7/dipy/denoise/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/pca_noise_estimate.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/nlmeans_block.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise copying build/lib.linux-x86_64-2.7/dipy/denoise/enhancement_kernel.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/denoise creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/_utils.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/streamline.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/fbcmeasures.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/vox2track.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/utils.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/metrics.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/eudx.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_utils.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_track_volumes.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_life.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_learning.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_fbc.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_distances.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_localtrack.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_propagation.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_metrics.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/tests/test_streamline.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/learning.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local copying build/lib.linux-x86_64-2.7/dipy/tracking/local/localtrack.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local copying build/lib.linux-x86_64-2.7/dipy/tracking/local/localtracking.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local copying build/lib.linux-x86_64-2.7/dipy/tracking/local/direction_getter.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local copying build/lib.linux-x86_64-2.7/dipy/tracking/local/interpolation.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/local/tests/test_local_tracking.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/local/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/local/tests/test_tissue_classifier.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local/tests copying build/lib.linux-x86_64-2.7/dipy/tracking/local/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local copying build/lib.linux-x86_64-2.7/dipy/tracking/local/tissue_classifier.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/local copying build/lib.linux-x86_64-2.7/dipy/tracking/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/streamlinespeed.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/propspeed.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/tracking/distances.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/benchmarks copying build/lib.linux-x86_64-2.7/dipy/tracking/benchmarks/bench_streamline.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/benchmarks copying build/lib.linux-x86_64-2.7/dipy/tracking/benchmarks/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking/benchmarks copying build/lib.linux-x86_64-2.7/dipy/tracking/life.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tracking copying build/lib.linux-x86_64-2.7/dipy/COMMIT_INFO.txt -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/shore.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/odf.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/cross_validation.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/recspeed.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/gqi.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/csdeconv.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/multi_voxel.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/sfm.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/ivim.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/cache.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/dki_micro.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/quick_squash.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/dti.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/utils.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/dsi.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/dki.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/shm.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_shore_odf.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_dki_micro.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_fwdti.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_gqi.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_interpolate.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_dsi.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_multi_voxel.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_shore_metrics.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_mapmri.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_dti.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_shm.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_peak_finding.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_dsi_deconv.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_peakdf.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_vec_val_vect.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_cross_validation.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_sfm.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_csdeconv.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_ivim.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_reco_utils.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_dki.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_dsi_metrics.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_cache.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_odf.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/tests/test_shore.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/tests copying build/lib.linux-x86_64-2.7/dipy/reconst/mapmri.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/peak_direction_getter.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/fwdti.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/vec_val_sum.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/peaks.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/base.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst copying build/lib.linux-x86_64-2.7/dipy/reconst/interpolate.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/benchmarks copying build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks/bench_bounding_box.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/benchmarks copying build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks/bench_peaks.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/benchmarks copying build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks/bench_csd.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/benchmarks copying build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks/bench_vec_val_sum.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/benchmarks copying build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/benchmarks copying build/lib.linux-x86_64-2.7/dipy/reconst/benchmarks/bench_squash.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/reconst/benchmarks creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/fixes copying build/lib.linux-x86_64-2.7/dipy/fixes/argparse.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/fixes copying build/lib.linux-x86_64-2.7/dipy/fixes/scipy.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/fixes copying build/lib.linux-x86_64-2.7/dipy/fixes/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/fixes creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/sims creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/sims/tests copying build/lib.linux-x86_64-2.7/dipy/sims/tests/test_voxel.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/sims/tests copying build/lib.linux-x86_64-2.7/dipy/sims/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/sims/tests copying build/lib.linux-x86_64-2.7/dipy/sims/tests/test_phantom.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/sims/tests copying build/lib.linux-x86_64-2.7/dipy/sims/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/sims copying build/lib.linux-x86_64-2.7/dipy/sims/phantom.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/sims copying build/lib.linux-x86_64-2.7/dipy/sims/voxel.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/sims creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/gradients.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/subdivide_octahedron.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/profile.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/sphere_stats.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/wavelet.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/onetime.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/rng.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/graph.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core/tests copying build/lib.linux-x86_64-2.7/dipy/core/tests/test_gradients.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core/tests copying build/lib.linux-x86_64-2.7/dipy/core/tests/test_optimize.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core/tests copying build/lib.linux-x86_64-2.7/dipy/core/tests/test_geometry.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core/tests copying build/lib.linux-x86_64-2.7/dipy/core/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core/tests copying build/lib.linux-x86_64-2.7/dipy/core/tests/test_sphere.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core/tests copying build/lib.linux-x86_64-2.7/dipy/core/tests/test_subdivide_octahedron.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core/tests copying build/lib.linux-x86_64-2.7/dipy/core/tests/test_graph.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core/tests copying build/lib.linux-x86_64-2.7/dipy/core/tests/test_ndindex.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core/tests copying build/lib.linux-x86_64-2.7/dipy/core/sphere.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/histeq.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/optimize.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/geometry.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core copying build/lib.linux-x86_64-2.7/dipy/core/ndindex.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/core creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils copying build/lib.linux-x86_64-2.7/dipy/utils/arrfuncs.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils copying build/lib.linux-x86_64-2.7/dipy/utils/tripwire.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils copying build/lib.linux-x86_64-2.7/dipy/utils/six.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils/tests copying build/lib.linux-x86_64-2.7/dipy/utils/tests/test_omp.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils/tests copying build/lib.linux-x86_64-2.7/dipy/utils/tests/test_tripwire.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils/tests copying build/lib.linux-x86_64-2.7/dipy/utils/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils/tests copying build/lib.linux-x86_64-2.7/dipy/utils/tests/test_arrfuncs.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils/tests copying build/lib.linux-x86_64-2.7/dipy/utils/_importlib.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils copying build/lib.linux-x86_64-2.7/dipy/utils/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils copying build/lib.linux-x86_64-2.7/dipy/utils/optpkg.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils copying build/lib.linux-x86_64-2.7/dipy/utils/omp.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/utils creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tests copying build/lib.linux-x86_64-2.7/dipy/tests/scriptrunner.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tests copying build/lib.linux-x86_64-2.7/dipy/tests/test_scripts.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tests copying build/lib.linux-x86_64-2.7/dipy/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/tests copying build/lib.linux-x86_64-2.7/dipy/__config__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy copying build/lib.linux-x86_64-2.7/dipy/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy copying build/lib.linux-x86_64-2.7/dipy/info.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/testing copying build/lib.linux-x86_64-2.7/dipy/testing/decorators.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/testing copying build/lib.linux-x86_64-2.7/dipy/testing/spherepoints.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/testing creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/testing/tests copying build/lib.linux-x86_64-2.7/dipy/testing/tests/test_decorators.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/testing/tests copying build/lib.linux-x86_64-2.7/dipy/testing/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/testing/tests copying build/lib.linux-x86_64-2.7/dipy/testing/tests/test_memory.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/testing/tests copying build/lib.linux-x86_64-2.7/dipy/testing/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/testing copying build/lib.linux-x86_64-2.7/dipy/testing/memory.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/testing creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/tissue.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/mask.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/quickbundles.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/metric.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/clusteringspeed.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/metricspeed.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/tests/test_mask.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/tests/test_feature.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/tests/test_metric.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/tests/test_qb.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/tests/test_quickbundles.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/tests/test_clustering.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/tests/test_adjustment.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/tests/test_mrf.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/tests copying build/lib.linux-x86_64-2.7/dipy/segment/clustering.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/clustering_algorithms.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/mrf.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/threshold.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/featurespeed.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment copying build/lib.linux-x86_64-2.7/dipy/segment/cythonutils.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/benchmarks copying build/lib.linux-x86_64-2.7/dipy/segment/benchmarks/bench_quickbundles.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/benchmarks copying build/lib.linux-x86_64-2.7/dipy/segment/benchmarks/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/segment/benchmarks creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/boots copying build/lib.linux-x86_64-2.7/dipy/boots/resampling.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/boots copying build/lib.linux-x86_64-2.7/dipy/boots/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/boots creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/direction copying build/lib.linux-x86_64-2.7/dipy/direction/probabilistic_direction_getter.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/direction creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/direction/tests copying build/lib.linux-x86_64-2.7/dipy/direction/tests/test_prob_direction_getter.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/direction/tests copying build/lib.linux-x86_64-2.7/dipy/direction/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/direction/tests copying build/lib.linux-x86_64-2.7/dipy/direction/tests/test_peaks.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/direction/tests copying build/lib.linux-x86_64-2.7/dipy/direction/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/direction copying build/lib.linux-x86_64-2.7/dipy/direction/peaks.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/direction creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io copying build/lib.linux-x86_64-2.7/dipy/io/gradients.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io copying build/lib.linux-x86_64-2.7/dipy/io/utils.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io copying build/lib.linux-x86_64-2.7/dipy/io/vtk.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io creating /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io/tests copying build/lib.linux-x86_64-2.7/dipy/io/tests/test_io_gradients.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io/tests copying build/lib.linux-x86_64-2.7/dipy/io/tests/test_dpy.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io/tests copying build/lib.linux-x86_64-2.7/dipy/io/tests/test_io_peaks.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io/tests copying build/lib.linux-x86_64-2.7/dipy/io/tests/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io/tests copying build/lib.linux-x86_64-2.7/dipy/io/tests/test_bvectxt.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io/tests copying build/lib.linux-x86_64-2.7/dipy/io/tests/test_io.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io/tests copying build/lib.linux-x86_64-2.7/dipy/io/dpy.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io copying build/lib.linux-x86_64-2.7/dipy/io/pickles.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io copying build/lib.linux-x86_64-2.7/dipy/io/image.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io copying build/lib.linux-x86_64-2.7/dipy/io/__init__.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io copying build/lib.linux-x86_64-2.7/dipy/io/trackvis.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io copying build/lib.linux-x86_64-2.7/dipy/io/peaks.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io copying build/lib.linux-x86_64-2.7/dipy/io/bvectxt.py -> /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy/io running install_scripts creating /<>/debian/tmp/usr/bin copying build/scripts-2.7/dipy_reconst_dti -> /<>/debian/tmp/usr/bin copying build/scripts-2.7/dipy_mask -> /<>/debian/tmp/usr/bin copying build/scripts-2.7/dipy_nlmeans -> /<>/debian/tmp/usr/bin copying build/scripts-2.7/dipy_reconst_dti_restore -> /<>/debian/tmp/usr/bin copying build/scripts-2.7/dipy_reconst_csd -> /<>/debian/tmp/usr/bin copying build/scripts-2.7/dipy_reconst_csa -> /<>/debian/tmp/usr/bin copying build/scripts-2.7/dipy_median_otsu -> /<>/debian/tmp/usr/bin changing mode of /<>/debian/tmp/usr/bin/dipy_reconst_dti to 775 changing mode of /<>/debian/tmp/usr/bin/dipy_mask to 775 changing mode of /<>/debian/tmp/usr/bin/dipy_nlmeans to 775 changing mode of /<>/debian/tmp/usr/bin/dipy_reconst_dti_restore to 775 changing mode of /<>/debian/tmp/usr/bin/dipy_reconst_csd to 775 changing mode of /<>/debian/tmp/usr/bin/dipy_reconst_csa to 775 changing mode of /<>/debian/tmp/usr/bin/dipy_median_otsu to 775 running install_data creating /<>/debian/tmp/usr/share creating /<>/debian/tmp/usr/share/doc creating /<>/debian/tmp/usr/share/doc/dipy creating /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/affine_registration_3d.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/viz_slice.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/tracking_tissue_classifier.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_dsid.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/segment_clustering_metrics.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/syn_registration_2d.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/segment_clustering_features.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/contextual_enhancement.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/simulate_dki.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_csd.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_dsi.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/segment_quickbundles.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/viz_advanced.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_shore.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/fiber_to_bundle_coherence.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/tracking_quick_start.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/combined_workflow_creation.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/piesno.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/brain_extraction_dwi.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_fwdti.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/bundle_registration.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/probabilistic_fiber_tracking.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/denoise_nlmeans.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/kfold_xval.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/viz_surfaces.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/streamline_length.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_ivim.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_csa_parallel.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/linear_fascicle_evaluation.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/streamline_formats.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/denoise_localpca.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/gradients_spheres.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_dsi_metrics.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_dti.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/syn_registration_3d.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_shore_metrics.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/simulate_multi_tensor.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_dki.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_csa.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_csd_parallel.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/segment_extending_clustering_framework.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/tracking_eudx_odf.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/streamline_tools.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/workflow_creation.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/sfm_tracking.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/viz_ui.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/introduction_to_basic_tracking.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reslice_datasets.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/snr_in_cc.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/denoise_ascm.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/restore_dti.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/viz_bundles.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_gqi.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/reconst_mapmri.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/sfm_reconst.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/tracking_eudx_tensor.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/deterministic_fiber_tracking.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/quick_start.py -> /<>/debian/tmp/usr/share/doc/dipy/examples copying doc/examples/tissue_classification.py -> /<>/debian/tmp/usr/share/doc/dipy/examples running install_egg_info Writing /<>/debian/tmp/usr/lib/python2.7/dist-packages/dipy-0.13.0.egg-info : # Prune duplicate LICENSE file find debian/ -name LICENSE -delete : # Only now lets build docs : # Copy pregenerated examples cp -rp doc-examples/*/examples_built/* doc/examples_built/ export PYTHONPATH=$(/bin/ls -d /<>/debian/tmp/usr/lib/python2.7/*-packages) \ MPLCONFIGDIR=/<>/build HOME=/<>/build; \ cd doc; /usr/bin/make html-after-examples SPHINXOPTS="-D today=\"November 25, 2017\"" make[2]: Entering directory '/<>/doc' # Standard html build after examples have been prepared sphinx-build -b html -d _build/doctrees -D today="November 25, 2017" . _build/html Running Sphinx v1.7.4 Extension error: Could not import extension numpydoc (exception: cannot import name Directive) make[2]: *** [Makefile:63: html-after-examples] Error 2 make[2]: Leaving directory '/<>/doc' make[1]: *** [debian/rules:81: override_dh_auto_install] Error 2 make[1]: Leaving directory '/<>' make: *** [debian/rules:30: binary-arch] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2018-05-02T12:24:58Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 487152 Build-Time: 304 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 22 Job: dipy_0.13.0-2 Machine Architecture: amd64 Package: dipy Package-Time: 346 Source-Version: 0.13.0-2 Space: 487152 Status: attempted Version: 0.13.0-2 -------------------------------------------------------------------------------- Finished at 2018-05-02T12:24:58Z Build needed 00:05:46, 487152k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 346.622489693s DC-Time-Estimation: 346.622489693 versus expected 1149 (r/m: 2.3148454995452186 ; m: 346.622489693)