DC-Build-Header: molds 0.3.1-1 / 2018-05-02 12:39:45 +0000 DC-Task: type:rebuild-binarch-only source:molds version:0.3.1-1 chroot:unstable esttime:408 logfile:/tmp/molds_0.3.1-1_unstable_clang60.log modes:clang60:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang60 molds_0.3.1-1' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-14-5.eu-central-1.compute.internal +==============================================================================+ | molds 0.3.1-1 (amd64) Wed, 02 May 2018 12:39:45 +0000 | +==============================================================================+ Package: molds Version: 0.3.1-1 Source Version: 0.3.1-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-eb6c70d3-750c-47e4-baeb-b52217625b9b' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang60 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=6.0 + echo 'Install of clang-6.0' Install of clang-6.0 + apt-get update Get:1 http://127.0.0.1:9999/debian unstable InRelease [242 kB] Get:2 http://127.0.0.1:9999/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Sources 2018-05-02-0830.09.pdiff [16.2 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Sources 2018-05-02-0830.09.pdiff [16.2 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2018-05-02-0830.09.pdiff [1781 B] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2018-05-02-0830.09.pdiff [1781 B] Get:6 http://127.0.0.1:9999/debian unstable/main Translation-en [6016 kB] Fetched 6332 kB in 2s (3477 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-6.0 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-6.0-doc Recommended packages: llvm-6.0-dev python libomp-dev libgpm2 The following NEW packages will be installed: clang-6.0 lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. Need to get 37.7 MB of archives. After this operation, 187 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.7-1 [92.1 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5 amd64 6.1+20180210-2 [95.7 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20170329-1 [85.2 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libllvm6.0 amd64 1:6.0-3 [14.5 MB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 8-20180425-1 [52.4 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-7-dev amd64 7.3.0-17 [204 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libc6-i386 amd64 2.27-3 [2855 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 lib32gcc1 amd64 1:8-20180425-1 [47.8 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 lib32stdc++6 amd64 8-20180425-1 [406 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-6.0-dev amd64 1:6.0-3 [3102 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-6.0 amd64 1:6.0-3 [6995 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 clang-6.0 amd64 1:6.0-3 [9175 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 37.7 MB in 0s (95.4 MB/s) Selecting previously unselected package libjsoncpp1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10022 files and directories currently installed.) Preparing to unpack .../00-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../01-libbsd0_0.8.7-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.7-1) ... Selecting previously unselected package libncurses5:amd64. Preparing to unpack .../02-libncurses5_6.1+20180210-2_amd64.deb ... Unpacking libncurses5:amd64 (6.1+20180210-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../03-libedit2_3.1-20170329-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20170329-1) ... Selecting previously unselected package libllvm6.0:amd64. Preparing to unpack .../04-libllvm6.0_1%3a6.0-3_amd64.deb ... Unpacking libllvm6.0:amd64 (1:6.0-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../05-libobjc4_8-20180425-1_amd64.deb ... Unpacking libobjc4:amd64 (8-20180425-1) ... Selecting previously unselected package libobjc-7-dev:amd64. Preparing to unpack .../06-libobjc-7-dev_7.3.0-17_amd64.deb ... Unpacking libobjc-7-dev:amd64 (7.3.0-17) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../07-libc6-i386_2.27-3_amd64.deb ... Unpacking libc6-i386 (2.27-3) ... Selecting previously unselected package lib32gcc1. Preparing to unpack .../08-lib32gcc1_1%3a8-20180425-1_amd64.deb ... 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Setting up lib32gcc1 (1:8-20180425-1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libllvm6.0:amd64 (1:6.0-3) ... Setting up libclang1-6.0:amd64 (1:6.0-3) ... Setting up lib32stdc++6 (8-20180425-1) ... Setting up libclang-common-6.0-dev (1:6.0-3) ... Setting up clang-6.0 (1:6.0-3) ... Processing triggers for libc-bin (2.27-3) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-6.0 g++-4.6 + ln -s clang-6.0 gcc-4.6 + ln -s clang-6.0 cpp-4.6 + ln -s clang-6.0 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-6.0 g++-4.7 + ln -s clang-6.0 gcc-4.7 + ln -s clang-6.0 cpp-4.7 + ln -s clang-6.0 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-6.0 g++-4.8 + ln -s clang-6.0 gcc-4.8 + ln -s clang-6.0 cpp-4.8 + ln -s clang-6.0 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-6.0 g++-4.9 + ln -s clang-6.0 gcc-4.9 + ln -s clang-6.0 cpp-4.9 + ln -s clang-6.0 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-6.0 g++-5 + ln -s clang-6.0 gcc-5 + ln -s clang-6.0 cpp-5 + ln -s clang-6.0 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-6.0 g++-6 + ln -s clang-6.0 gcc-6 + ln -s clang-6.0 cpp-6 + ln -s clang-6.0 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-6.0 g++-7 + ln -s clang-6.0 gcc-7 + ln -s clang-6.0 cpp-7 + ln -s clang-6.0 gcc + echo 'gcc-7 hold' + dpkg --set-selections + echo 'g++-7 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-6.0 g++-8 + ln -s clang-6.0 gcc-8 + ln -s clang-6.0 cpp-8 + ln -s clang-6.0 gcc + echo 'gcc-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + cd - /build/molds-41BGHR + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang60'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'molds' packaging is maintained in the 'Svn' version control system at: svn://svn.debian.org/svn/debichem/unstable/molds/ Need to get 1056 kB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main molds 0.3.1-1 (dsc) [2044 B] Get:2 http://127.0.0.1:9999/debian unstable/main molds 0.3.1-1 (tar) [1049 kB] Get:3 http://127.0.0.1:9999/debian unstable/main molds 0.3.1-1 (diff) [4956 B] Fetched 1056 kB in 0s (6206 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/molds-41BGHR/molds-0.3.1' with '<>' I: NOTICE: Log filtering will replace 'build/molds-41BGHR' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-gGEH6x/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-gGEH6x/apt_archive ./ InRelease Get:2 copy:/<>/resolver-gGEH6x/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-gGEH6x/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-gGEH6x/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-gGEH6x/apt_archive ./ Packages [432 B] Fetched 1738 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-gGEH6x/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10771 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 7.0.50~), ruby, gawk, libopenblas-dev, liblapacke-dev, libblas-dev, libboost-dev, libboost-mpi-dev, libboost-serialization-dev, libboost-thread-dev, mpi-default-bin, mpi-default-dev Filtered Build-Depends: debhelper (>= 7.0.50~), ruby, gawk, libopenblas-dev, liblapacke-dev, libblas-dev, libboost-dev, libboost-mpi-dev, libboost-serialization-dev, libboost-thread-dev, mpi-default-bin, mpi-default-dev dpkg-deb: building package 'sbuild-build-depends-molds-dummy' in '/<>/resolver-gGEH6x/apt_archive/sbuild-build-depends-molds-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-molds-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-gGEH6x/apt_archive ./ InRelease Get:2 copy:/<>/resolver-gGEH6x/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-gGEH6x/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-gGEH6x/apt_archive ./ Sources [560 B] Get:5 copy:/<>/resolver-gGEH6x/apt_archive ./ Packages [642 B] Fetched 2165 B in 0s (0 B/s) Reading package lists... Reading package lists... Install molds build dependencies (apt-based resolver) ----------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism file gawk gettext gettext-base groff-base ibverbs-providers intltool-debian libarchive-zip-perl libblas-dev libblas3 libboost-atomic1.62-dev libboost-atomic1.62.0 libboost-chrono1.62-dev libboost-chrono1.62.0 libboost-date-time1.62-dev libboost-date-time1.62.0 libboost-dev libboost-mpi-dev libboost-mpi1.62-dev libboost-mpi1.62.0 libboost-serialization-dev libboost-serialization1.62-dev libboost-serialization1.62.0 libboost-system1.62-dev libboost-system1.62.0 libboost-thread-dev libboost-thread1.62-dev libboost-thread1.62.0 libboost1.62-dev libcroco3 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libfabric1 libfile-stripnondeterminism-perl libgfortran4 libglib2.0-0 libgssapi-krb5-2 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapacke liblapacke-dev libltdl-dev libltdl7 libmagic-mgc libmagic1 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenblas-base libopenblas-dev libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpmix2 libpsm-infinipath1 librdmacm1 libreadline7 libruby2.5 libsigsegv2 libssl1.0.2 libssl1.1 libtimedate-perl libtmglib-dev libtmglib3 libtool libxml2 libyaml-0-2 m4 man-db mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssl po-debconf rake readline-common ruby ruby-did-you-mean ruby-minitest ruby-net-telnet ruby-power-assert ruby-test-unit ruby2.5 rubygems-integration Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make dwz gawk-doc gettext-doc libasprintf-dev libgettextpo-dev groff liblapack-doc libboost-doc libboost-graph1.62-dev libboost1.62-doc libboost-context1.62-dev libboost-coroutine1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev libboost-filesystem1.62-dev libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev libboost-mpi-python1.62-dev libboost-program-options1.62-dev libboost-python1.62-dev libboost-random1.62-dev libboost-regex1.62-dev libboost-signals1.62-dev libboost-test1.62-dev libboost-timer1.62-dev libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev libmpfrc++-dev libntl-dev krb5-doc krb5-user libhwloc-contrib-plugins libtool-doc openmpi-doc pciutils gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser opencl-icd gfortran keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl readline-doc ri ruby-dev bundler Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales xauth libmail-sendmail-perl zip fonts-lato libjs-jquery The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism file gawk gettext gettext-base groff-base ibverbs-providers intltool-debian libarchive-zip-perl libblas-dev libblas3 libboost-atomic1.62-dev libboost-atomic1.62.0 libboost-chrono1.62-dev libboost-chrono1.62.0 libboost-date-time1.62-dev libboost-date-time1.62.0 libboost-dev libboost-mpi-dev libboost-mpi1.62-dev libboost-mpi1.62.0 libboost-serialization-dev libboost-serialization1.62-dev libboost-serialization1.62.0 libboost-system1.62-dev libboost-system1.62.0 libboost-thread-dev libboost-thread1.62-dev libboost-thread1.62.0 libboost1.62-dev libcroco3 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libfabric1 libfile-stripnondeterminism-perl libgfortran4 libglib2.0-0 libgssapi-krb5-2 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapacke liblapacke-dev libltdl-dev libltdl7 libmagic-mgc libmagic1 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenblas-base libopenblas-dev libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpmix2 libpsm-infinipath1 librdmacm1 libreadline7 libruby2.5 libsigsegv2 libssl1.0.2 libssl1.1 libtimedate-perl libtmglib-dev libtmglib3 libtool libxml2 libyaml-0-2 m4 man-db mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssl po-debconf rake readline-common ruby ruby-did-you-mean ruby-minitest ruby-net-telnet ruby-power-assert ruby-test-unit ruby2.5 rubygems-integration sbuild-build-depends-molds-dummy 0 upgraded, 108 newly installed, 0 to remove and 0 not upgraded. Need to get 53.5 MB of archives. After this operation, 356 MB of additional disk space will be used. Get:1 copy:/<>/resolver-gGEH6x/apt_archive ./ sbuild-build-depends-molds-dummy 0.invalid.0 [932 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 11.1.2 [190 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-10 [1176 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.5.0-1 [29.0 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.8.3-2 [1180 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 7.0-3 [70.4 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libreadline7 amd64 7.0-3+b1 [151 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 gawk amd64 1:4.1.4+dfsg-1+b1 [571 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.33-2 [234 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.33-2 [113 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.33-2 [65.6 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-6 [122 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 libkeyutils1 amd64 1.5.9-9.2 [12.9 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5support0 amd64 1.16-2 [62.8 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 libk5crypto3 amd64 1.16-2 [121 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5-3 amd64 1.16-2 [316 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.16-2 [158 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.0.2 amd64 1.0.2o-1 [1296 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 openssh-client amd64 1:7.7p1-2 [802 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-3.1 [736 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-6 [434 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.1 amd64 1.1.0h-2 [1352 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 openssl amd64 1.1.0h-2 [744 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 ca-certificates all 20180409 [161 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2.1 [547 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 17 [16.5 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.60-1 [95.6 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.041-1 [19.9 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.041-1 [12.0 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.56.1-2 [2928 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-9 [7698 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-6.1 [725 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-2 [144 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-6 [1302 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 11.2.1 [1013 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 libnl-3-200 amd64 3.2.27-2 [61.5 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 libnl-route-3-200 amd64 3.2.27-2 [136 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 libibverbs1 amd64 17.1-2 [45.2 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 ibverbs-providers amd64 17.1-2 [170 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran4 amd64 7.3.0-17 [487 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 libblas3 amd64 3.8.0-1 [150 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 libblas-dev amd64 3.8.0-1 [156 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 libboost1.62-dev amd64 1.62.0+dfsg-5+b1 [7004 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 libboost-atomic1.62.0 amd64 1.62.0+dfsg-5+b1 [30.9 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 libboost-atomic1.62-dev amd64 1.62.0+dfsg-5+b1 [29.8 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 libboost-system1.62.0 amd64 1.62.0+dfsg-5+b1 [32.9 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 libboost-chrono1.62.0 amd64 1.62.0+dfsg-5+b1 [36.5 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 libboost-chrono1.62-dev amd64 1.62.0+dfsg-5+b1 [36.9 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 libboost-date-time1.62.0 amd64 1.62.0+dfsg-5+b1 [43.4 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 libboost-serialization1.62.0 amd64 1.62.0+dfsg-5+b1 [126 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 libboost-serialization1.62-dev amd64 1.62.0+dfsg-5+b1 [164 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libboost-date-time1.62-dev amd64 1.62.0+dfsg-5+b1 [50.6 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libboost-dev amd64 1.62.0.1 [3632 B] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 libevent-2.1-6 amd64 2.1.8-stable-4 [177 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 libevent-core-2.1-6 amd64 2.1.8-stable-4 [129 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 libevent-pthreads-2.1-6 amd64 2.1.8-stable-4 [47.9 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-5 [172 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 librdmacm1 amd64 17.1-2 [65.8 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 libfabric1 amd64 1.5.3-1 [303 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 libltdl7 amd64 2.4.6-2.1 [389 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 libnuma1 amd64 2.0.11-2.2 [33.8 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc5 amd64 1.11.10-1 [110 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 libpciaccess0 amd64 0.14-1 [53.5 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.2.12-1 [37.1 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc-plugins amd64 1.11.10-1 [16.7 kB] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 libpmix2 amd64 2.1.1~rc1-4 [340 kB] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 libopenmpi3 amd64 3.0.1.real-1 [2099 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 libboost-mpi1.62.0 amd64 1.62.0+dfsg-5+b1 [71.2 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 openmpi-common all 3.0.1.real-1 [158 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 libibverbs-dev amd64 17.1-2 [104 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 libnuma-dev amd64 2.0.11-2.2 [46.7 kB] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 libltdl-dev amd64 2.4.6-2.1 [161 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 libhwloc-dev amd64 1.11.10-1 [172 kB] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 openmpi-bin amd64 3.0.1.real-1 [203 kB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 libopenmpi-dev amd64 3.0.1.real-1 [936 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 mpi-default-dev amd64 1.13 [5476 B] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 libboost-mpi1.62-dev amd64 1.62.0+dfsg-5+b1 [155 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 libboost-mpi-dev amd64 1.62.0.1 [3500 B] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libboost-serialization-dev amd64 1.62.0.1 [3642 B] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 libboost-system1.62-dev amd64 1.62.0+dfsg-5+b1 [34.3 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libboost-thread1.62.0 amd64 1.62.0+dfsg-5+b1 [72.2 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 libboost-thread1.62-dev amd64 1.62.0+dfsg-5+b1 [72.2 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libboost-thread-dev amd64 1.62.0.1 [3442 B] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 libopenblas-base amd64 0.2.20+ds-4 [4041 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 libtmglib3 amd64 3.8.0-1 [132 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 liblapacke amd64 3.8.0-1 [367 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 libopenblas-dev amd64 0.2.20+ds-4 [3874 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 libtmglib-dev amd64 3.8.0-1 [133 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 liblapacke-dev amd64 3.8.0-1 [328 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 rake all 12.3.1-2 [66.9 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 ruby-did-you-mean all 1.2.1-1 [14.4 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 ruby-minitest all 5.10.3-1 [53.5 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 ruby-net-telnet all 0.1.1-2 [12.5 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 ruby-power-assert all 0.3.0-1 [7902 B] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 ruby-test-unit all 3.2.7-1 [72.3 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 libyaml-0-2 amd64 0.1.7-2 [47.6 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 libruby2.5 amd64 2.5.1-1 [3408 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 mpi-default-bin amd64 1.13 [4672 B] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 rubygems-integration all 1.11 [4994 B] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 ruby2.5 amd64 2.5.1-1 [384 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 ruby amd64 1:2.5.1 [11.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 53.5 MB in 1s (60.1 MB/s) Selecting previously unselected package bsdmainutils. (Reading database ... 10771 files and directories currently installed.) Preparing to unpack .../0-bsdmainutils_11.1.2_amd64.deb ... Unpacking bsdmainutils (11.1.2) ... Selecting previously unselected package groff-base. Preparing to unpack .../1-groff-base_1.22.3-10_amd64.deb ... Unpacking groff-base (1.22.3-10) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../2-libpipeline1_1.5.0-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.0-1) ... Selecting previously unselected package man-db. Preparing to unpack .../3-man-db_2.8.3-2_amd64.deb ... Unpacking man-db (2.8.3-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_7.0-3_all.deb ... Unpacking readline-common (7.0-3) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../5-libreadline7_7.0-3+b1_amd64.deb ... Unpacking libreadline7:amd64 (7.0-3+b1) ... Selecting previously unselected package libsigsegv2:amd64. 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Setting up libpipeline1:amd64 (1.5.0-1) ... Setting up m4 (1.4.18-1) ... Setting up gawk (1:4.1.4+dfsg-1+b1) ... Setting up libicu57:amd64 (57.1-9) ... Setting up libboost-serialization1.62-dev:amd64 (1.62.0+dfsg-5+b1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-6.1) ... Setting up libmagic-mgc (1:5.33-2) ... Setting up libmagic1:amd64 (1:5.33-2) ... Setting up libcroco3:amd64 (0.6.12-2) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-5) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libssl1.0.2:amd64 (1.0.2o-1) ... Setting up ruby-did-you-mean (1.2.1-1) ... Setting up libyaml-0-2:amd64 (0.1.7-2) ... Setting up libblas3:amd64 (3.8.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4) ... Setting up openmpi-common (3.0.1.real-1) ... Processing triggers for libc-bin (2.27-3) ... Setting up autotools-dev (20180224.1) ... Setting up libssl1.1:amd64 (1.1.0h-2) ... Setting up libltdl7:amd64 (2.4.6-2.1) ... Setting up openssl (1.1.0h-2) ... Setting up ruby-net-telnet (0.1.1-2) ... Setting up libboost-atomic1.62.0:amd64 (1.62.0+dfsg-5+b1) ... Setting up libpciaccess0:amd64 (0.14-1) ... Setting up libboost-dev:amd64 (1.62.0.1) ... Setting up libnuma-dev:amd64 (2.0.11-2.2) ... Setting up ocl-icd-libopencl1:amd64 (2.2.12-1) ... Setting up libkeyutils1:amd64 (1.5.9-9.2) ... Setting up bsdmainutils (11.1.2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libnl-3-200:amd64 (3.2.27-2) ... Setting up ruby-minitest (5.10.3-1) ... Setting up ca-certificates (20180409) ... Updating certificates in /etc/ssl/certs... 133 added, 0 removed; done. Setting up autopoint (0.19.8.1-6) ... Setting up libboost-system1.62.0:amd64 (1.62.0+dfsg-5+b1) ... Setting up ruby-power-assert (0.3.0-1) ... Setting up libfile-stripnondeterminism-perl (0.041-1) ... Setting up libopenblas-base:amd64 (0.2.20+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libboost-atomic1.62-dev:amd64 (1.62.0+dfsg-5+b1) ... Setting up libboost-serialization-dev:amd64 (1.62.0.1) ... Setting up libboost-date-time1.62-dev:amd64 (1.62.0+dfsg-5+b1) ... Setting up libtmglib3:amd64 (3.8.0-1) ... Setting up libltdl-dev:amd64 (2.4.6-2.1) ... Setting up ruby-test-unit (3.2.7-1) ... Setting up gettext (0.19.8.1-6) ... Setting up libblas-dev:amd64 (3.8.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libboost-thread1.62.0:amd64 (1.62.0+dfsg-5+b1) ... Setting up libnl-route-3-200:amd64 (3.2.27-2) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.33-2) ... Setting up libhwloc5:amd64 (1.11.10-1) ... Setting up libkrb5support0:amd64 (1.16-2) ... Setting up libhwloc-plugins (1.11.10-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libboost-system1.62-dev:amd64 (1.62.0+dfsg-5+b1) ... Setting up automake (1:1.15.1-3.1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up rubygems-integration (1.11) ... Setting up liblapacke:amd64 (3.8.0-1) ... Setting up man-db (2.8.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libopenblas-dev:amd64 (0.2.20+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libboost-chrono1.62.0:amd64 (1.62.0+dfsg-5+b1) ... Setting up libtmglib-dev:amd64 (3.8.0-1) ... Setting up libtool (2.4.6-2.1) ... Setting up libibverbs1:amd64 (17.1-2) ... Setting up libruby2.5:amd64 (2.5.1-1) ... Setting up libk5crypto3:amd64 (1.16-2) ... Setting up po-debconf (1.0.20) ... Setting up libhwloc-dev:amd64 (1.11.10-1) ... Setting up liblapacke-dev:amd64 (3.8.0-1) ... Setting up libpmix2:amd64 (2.1.1~rc1-4) ... Setting up librdmacm1:amd64 (17.1-2) ... Setting up libboost-chrono1.62-dev:amd64 (1.62.0+dfsg-5+b1) ... Setting up ibverbs-providers:amd64 (17.1-2) ... Setting up libboost-thread1.62-dev:amd64 (1.62.0+dfsg-5+b1) ... Setting up libkrb5-3:amd64 (1.16-2) ... Setting up libibverbs-dev:amd64 (17.1-2) ... Setting up ruby2.5 (2.5.1-1) ... Setting up libboost-thread-dev:amd64 (1.62.0.1) ... Setting up libfabric1 (1.5.3-1) ... Setting up libgssapi-krb5-2:amd64 (1.16-2) ... Setting up ruby (1:2.5.1) ... Setting up openssh-client (1:7.7p1-2) ... Setting up libopenmpi3:amd64 (3.0.1.real-1) ... Setting up openmpi-bin (3.0.1.real-1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: error: no alternatives for mpi update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up mpi-default-bin (1.13) ... Setting up libboost-mpi1.62.0 (1.62.0+dfsg-5+b1) ... Setting up libopenmpi-dev:amd64 (3.0.1.real-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up mpi-default-dev (1.13) ... Setting up libboost-mpi1.62-dev (1.62.0+dfsg-5+b1) ... Setting up libboost-mpi-dev (1.62.0.1) ... Setting up dh-autoreconf (17) ... Setting up debhelper (11.2.1) ... Setting up dh-strip-nondeterminism (0.041-1) ... Setting up sbuild-build-depends-molds-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.27-3) ... Processing triggers for ca-certificates (20180409) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-5-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.30-16 dpkg-dev_1.19.0.5 g++-7_7.3.0-17 gcc-7_7.3.0-17 libc6-dev_2.27-3 libstdc++-7-dev_7.3.0-17 libstdc++6_8-20180425-1 linux-libc-dev_4.15.17-1 Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.45 bash_4.4.18-2 binutils_2.30-16 binutils-common_2.30-16 binutils-x86-64-linux-gnu_2.30-16 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.5 bzip2_1.0.6-8.1 ca-certificates_20180409 clang-6.0_1:6.0-3 coreutils_8.28-1 cpp_4:7.3.0-3 cpp-7_7.3.0-17 dash_0.5.8-2.10 debconf_1.5.66 debfoster_2.7-2.1+b1 debhelper_11.2.1 debian-archive-keyring_2017.7 debianutils_4.8.4 dh-autoreconf_17 dh-strip-nondeterminism_0.041-1 diffutils_1:3.6-1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-2 e2fsprogs_1.44.1-2 eatmydata_105-6 fakeroot_1.22-2 fdisk_2.31.1-0.5 file_1:5.33-2 findutils_4.6.0+git+20171230-2 g++_4:7.3.0-3 g++-7_7.3.0-17 gawk_1:4.1.4+dfsg-1+b1 gcc_4:7.3.0-3 gcc-6-base_6.4.0-17 gcc-7_7.3.0-17 gcc-7-base_7.3.0-17 gcc-8-base_8-20180425-1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5+b1 hostname_3.20 ibverbs-providers_17.1-2 init-system-helpers_1.51 intltool-debian_0.35.0+20060710.4 lib32gcc1_1:8-20180425-1 lib32stdc++6_8-20180425-1 libacl1_2.2.52-3+b1 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libasan4_7.3.0-17 libatomic1_8-20180425-1 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libbinutils_2.30-16 libblas-dev_3.8.0-1 libblas3_3.8.0-1 libblkid1_2.31.1-0.5 libboost-atomic1.62-dev_1.62.0+dfsg-5+b1 libboost-atomic1.62.0_1.62.0+dfsg-5+b1 libboost-chrono1.62-dev_1.62.0+dfsg-5+b1 libboost-chrono1.62.0_1.62.0+dfsg-5+b1 libboost-date-time1.62-dev_1.62.0+dfsg-5+b1 libboost-date-time1.62.0_1.62.0+dfsg-5+b1 libboost-dev_1.62.0.1 libboost-mpi-dev_1.62.0.1 libboost-mpi1.62-dev_1.62.0+dfsg-5+b1 libboost-mpi1.62.0_1.62.0+dfsg-5+b1 libboost-serialization-dev_1.62.0.1 libboost-serialization1.62-dev_1.62.0+dfsg-5+b1 libboost-serialization1.62.0_1.62.0+dfsg-5+b1 libboost-system1.62-dev_1.62.0+dfsg-5+b1 libboost-system1.62.0_1.62.0+dfsg-5+b1 libboost-thread-dev_1.62.0.1 libboost-thread1.62-dev_1.62.0+dfsg-5+b1 libboost-thread1.62.0_1.62.0+dfsg-5+b1 libboost1.62-dev_1.62.0+dfsg-5+b1 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3 libc-dev-bin_2.27-3 libc6_2.27-3 libc6-dev_2.27-3 libc6-i386_2.27-3 libcap-ng0_0.7.9-1 libcc1-0_8-20180425-1 libcilkrts5_7.3.0-17 libclang-common-6.0-dev_1:6.0-3 libclang1-6.0_1:6.0-3 libcom-err2_1.44.1-2 libcomerr2_1.44.1-2 libcroco3_0.6.12-2 libdb5.3_5.3.28-13.1+b1 libdebconfclient0_0.243 libdpkg-perl_1.19.0.5 libeatmydata1_105-6 libedit2_3.1-20170329-1 libevent-2.1-6_2.1.8-stable-4 libevent-core-2.1-6_2.1.8-stable-4 libevent-pthreads-2.1-6_2.1.8-stable-4 libext2fs2_1.44.1-2 libfabric1_1.5.3-1 libfakeroot_1.22-2 libfdisk1_2.31.1-0.5 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.041-1 libgc1c2_1:7.4.2-8.2 libgcc-7-dev_7.3.0-17 libgcc1_1:8-20180425-1 libgcrypt20_1.8.2-2 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgfortran4_7.3.0-17 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180425-1 libgpg-error0_1.29-4 libgssapi-krb5-2_1.16-2 libhogweed4_3.4-1 libhwloc-dev_1.11.10-1 libhwloc-plugins_1.11.10-1 libhwloc5_1.11.10-1 libibverbs-dev_17.1-2 libibverbs1_17.1-2 libicu57_57.1-9 libidn2-0_2.0.4-1.1 libisl15_0.18-4 libisl19_0.19-1 libitm1_8-20180425-1 libjsoncpp1_1.7.4-3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libkrb5-3_1.16-2 libkrb5support0_1.16-2 liblapacke_3.8.0-1 liblapacke-dev_3.8.0-1 libllvm6.0_1:6.0-3 liblsan0_8-20180425-1 libltdl-dev_2.4.6-2.1 libltdl7_2.4.6-2.1 liblz4-1_1.8.1.2-1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-2 libmagic1_1:5.33-2 libmount1_2.31.1-0.5 libmpc3_1.1.0-1 libmpfr4_3.1.6-1 libmpfr6_4.0.1-1 libmpx2_8-20180425-1 libncurses5_6.1+20180210-2 libncursesw5_6.1+20180210-2 libnettle6_3.4-1 libnl-3-200_3.2.27-2 libnl-route-3-200_3.2.27-2 libnuma-dev_2.0.11-2.2 libnuma1_2.0.11-2.2 libobjc-7-dev_7.3.0-17 libobjc4_8-20180425-1 libopenblas-base_0.2.20+ds-4 libopenblas-dev_0.2.20+ds-4 libopenmpi-dev_3.0.1.real-1 libopenmpi3_3.0.1.real-1 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam0g_1.1.8-3.7 libpciaccess0_0.14-1 libpcre3_2:8.39-9 libperl5.26_5.26.2-3 libpipeline1_1.5.0-1 libpmix2_2.1.1~rc1-4 libpsm-infinipath1_3.3+20.604758e7-5 libquadmath0_8-20180425-1 librdmacm1_17.1-2 libreadline7_7.0-3+b1 libruby2.5_2.5.1-1 libseccomp2_2.3.3-1 libselinux1_2.7-2+b2 libsemanage-common_2.7-2 libsemanage1_2.7-2+b2 libsepol1_2.7-1 libsigsegv2_2.12-2 libsmartcols1_2.31.1-0.5 libss2_1.44.1-2 libssl1.0.2_1.0.2o-1 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-17 libstdc++6_8-20180425-1 libsystemd0_238-4 libtasn1-6_4.13-2 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-2 libtinfo6_6.1+20180210-2 libtmglib-dev_3.8.0-1 libtmglib3_3.8.0-1 libtool_2.4.6-2.1 libtsan0_8-20180425-1 libubsan0_7.3.0-17 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libxml2_2.9.4+dfsg1-6.1 libyaml-0-2_0.1.7-2 libzstd1_1.3.4+dfsg-1 linux-libc-dev_4.15.17-1 login_1:4.5-1 m4_1.4.18-1 make_4.2.1-1 man-db_2.8.3-2 mawk_1.3.3-17+b3 mount_2.31.1-0.5 mpi-default-bin_1.13 mpi-default-dev_1.13 multiarch-support_2.27-3 ncurses-base_6.1+20180210-2 ncurses-bin_6.1+20180210-2 ocl-icd-libopencl1_2.2.12-1 openmpi-bin_3.0.1.real-1 openmpi-common_3.0.1.real-1 openssh-client_1:7.7p1-2 openssl_1.1.0h-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-3 perl-base_5.26.2-3 perl-modules-5.26_5.26.2-3 po-debconf_1.0.20 rake_12.3.1-2 readline-common_7.0-3 ruby_1:2.5.1 ruby-did-you-mean_1.2.1-1 ruby-minitest_5.10.3-1 ruby-net-telnet_0.1.1-2 ruby-power-assert_0.3.0-1 ruby-test-unit_3.2.7-1 ruby2.5_2.5.1-1 rubygems-integration_1.11 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-molds-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-1 util-linux_2.31.1-0.5 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sun Oct 26 19:15:58 2014 UTC gpgv: using RSA key DC686A27B43481B0 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./molds_0.3.1-1.dsc dpkg-source: info: extracting molds in /<> dpkg-source: info: unpacking molds_0.3.1.orig.tar.gz dpkg-source: info: unpacking molds_0.3.1-1.debian.tar.xz dpkg-source: info: applying makefile_flags.patch dpkg-source: info: applying testsuite_output.patch dpkg-source: info: applying fix-ftbfs-with-GCC-4.9.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-eb6c70d3-750c-47e4-baeb-b52217625b9b SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package molds dpkg-buildpackage: info: source version 0.3.1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael Banck dpkg-source --before-build molds-0.3.1 dpkg-buildpackage: info: host architecture amd64 dpkg-source: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file fakeroot debian/rules clean dh clean dh: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' (cd src; make -f Makefile_GNU clean) make[2]: Entering directory '/<>/src' mpicxx -MM base/Enums.cpp base/PrintController.cpp base/MolDSException.cpp base/MallocerFreer.cpp mpi/MpiProcess.cpp mpi/AsyncCommunicator.cpp wrappers/Blas.cpp wrappers/Lapack.cpp base/Utilities.cpp base/MathUtilities.cpp base/EularAngle.cpp base/Parameters.cpp base/atoms/Atom.cpp base/atoms/Hatom.cpp base/atoms/Liatom.cpp base/atoms/Catom.cpp base/atoms/Natom.cpp base/atoms/Oatom.cpp base/atoms/Satom.cpp base/atoms/mm/EnvironmentalPointCharge.cpp base/factories/AtomFactory.cpp base/Molecule.cpp base/InputParser.cpp base/GTOExpansionSTO.cpp base/RealSphericalHarmonicsIndex.cpp base/loggers/MOLogger.cpp base/loggers/DensityLogger.cpp base/loggers/HoleDensityLogger.cpp base/loggers/ParticleDensityLogger.cpp cndo/Cndo2.cpp indo/Indo.cpp zindo/ZindoS.cpp mndo/Mndo.cpp am1/Am1.cpp am1/Am1D.cpp pm3/Pm3.cpp pm3/Pm3D.cpp pm3/Pm3Pddg.cpp base/factories/ElectronicStructureFactory.cpp md/MD.cpp mc/MC.cpp rpmd/RPMD.cpp nasco/NASCO.cpp optimization/Optimizer.cpp optimization/ConjugateGradient.cpp optimization/SteepestDescent.cpp optimization/BFGS.cpp optimization/GEDIIS.cpp base/factories/OptimizerFactory.cpp base/MolDS.cpp Main.cpp -I/usr/include/mpi -I/usr/lib/openblas-base//include/ | sed 's/^\([^ ]\)/obj\/\1/g' | sed 's/\($*\)\.o[ :]*/\1.o : /g' > obj/objfile.dep clang: warning: -lmpi_cxx: 'linker' input unused [-Wunused-command-line-argument] clang: warning: -lmpi: 'linker' input unused [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-L/usr/lib/x86_64-linux-gnu/openmpi/lib' [-Wunused-command-line-argument] In file included from base/PrintController.cpp:30: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/MallocerFreer.cpp:34: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. mpi/MpiProcess.cpp:26:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from mpi/AsyncCommunicator.cpp:34: mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from wrappers/Blas.cpp:34: wrappers/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from wrappers/Lapack.cpp:33: wrappers/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/Utilities.cpp:26:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/MathUtilities.cpp:33: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/Parameters.cpp:36: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Atom.cpp:35: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Hatom.cpp:33: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Liatom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Catom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Natom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Oatom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Satom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/mm/EnvironmentalPointCharge.cpp:32: base/atoms/mm/../../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/factories/AtomFactory.cpp:32: base/factories/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/Molecule.cpp:27:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/InputParser.cpp:37: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/loggers/MOLogger.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/loggers/DensityLogger.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/loggers/HoleDensityLogger.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/loggers/ParticleDensityLogger.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. cndo/Cndo2.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from indo/Indo.cpp:35: indo/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. zindo/ZindoS.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. mndo/Mndo.cpp:27:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from am1/Am1.cpp:33: am1/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from am1/Am1D.cpp:32: am1/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from pm3/Pm3.cpp:33: pm3/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from pm3/Pm3D.cpp:33: pm3/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from pm3/Pm3Pddg.cpp:33: pm3/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/factories/ElectronicStructureFactory.cpp:33: base/factories/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from md/MD.cpp:36: md/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from mc/MC.cpp:36: mc/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from rpmd/RPMD.cpp:36: rpmd/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from nasco/NASCO.cpp:36: nasco/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/Optimizer.cpp:37: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/ConjugateGradient.cpp:36: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/SteepestDescent.cpp:36: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/BFGS.cpp:39: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/GEDIIS.cpp:38: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/factories/OptimizerFactory.cpp:34: base/factories/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/MolDS.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from Main.cpp:32: ./mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. rm -f obj/Enums.o obj/PrintController.o obj/MolDSException.o obj/MallocerFreer.o obj/MpiProcess.o obj/AsyncCommunicator.o obj/Blas.o obj/Lapack.o obj/Utilities.o obj/MathUtilities.o obj/EularAngle.o obj/Parameters.o obj/Atom.o obj/Hatom.o obj/Liatom.o obj/Catom.o obj/Natom.o obj/Oatom.o obj/Satom.o obj/EnvironmentalPointCharge.o obj/AtomFactory.o obj/Molecule.o obj/InputParser.o obj/GTOExpansionSTO.o obj/RealSphericalHarmonicsIndex.o obj/MOLogger.o obj/DensityLogger.o obj/HoleDensityLogger.o obj/ParticleDensityLogger.o obj/Cndo2.o obj/Indo.o obj/ZindoS.o obj/Mndo.o obj/Am1.o obj/Am1D.o obj/Pm3.o obj/Pm3D.o obj/Pm3Pddg.o obj/ElectronicStructureFactory.o obj/MD.o obj/MC.o obj/RPMD.o obj/NASCO.o obj/Optimizer.o obj/ConjugateGradient.o obj/SteepestDescent.o obj/BFGS.o obj/GEDIIS.o obj/OptimizerFactory.o obj/MolDS.o obj/Main.o molds obj/objfile.dep make[2]: Leaving directory '/<>/src' rm -f test/temp.dat make[1]: Leaving directory '/<>' dh_clean dh_clean: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules build-arch dh build-arch dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_update_autotools_config -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' (cd src; make -f Makefile_GNU) make[2]: Entering directory '/<>/src' mpicxx -MM base/Enums.cpp base/PrintController.cpp base/MolDSException.cpp base/MallocerFreer.cpp mpi/MpiProcess.cpp mpi/AsyncCommunicator.cpp wrappers/Blas.cpp wrappers/Lapack.cpp base/Utilities.cpp base/MathUtilities.cpp base/EularAngle.cpp base/Parameters.cpp base/atoms/Atom.cpp base/atoms/Hatom.cpp base/atoms/Liatom.cpp base/atoms/Catom.cpp base/atoms/Natom.cpp base/atoms/Oatom.cpp base/atoms/Satom.cpp base/atoms/mm/EnvironmentalPointCharge.cpp base/factories/AtomFactory.cpp base/Molecule.cpp base/InputParser.cpp base/GTOExpansionSTO.cpp base/RealSphericalHarmonicsIndex.cpp base/loggers/MOLogger.cpp base/loggers/DensityLogger.cpp base/loggers/HoleDensityLogger.cpp base/loggers/ParticleDensityLogger.cpp cndo/Cndo2.cpp indo/Indo.cpp zindo/ZindoS.cpp mndo/Mndo.cpp am1/Am1.cpp am1/Am1D.cpp pm3/Pm3.cpp pm3/Pm3D.cpp pm3/Pm3Pddg.cpp base/factories/ElectronicStructureFactory.cpp md/MD.cpp mc/MC.cpp rpmd/RPMD.cpp nasco/NASCO.cpp optimization/Optimizer.cpp optimization/ConjugateGradient.cpp optimization/SteepestDescent.cpp optimization/BFGS.cpp optimization/GEDIIS.cpp base/factories/OptimizerFactory.cpp base/MolDS.cpp Main.cpp -I/usr/include/mpi -I/usr/lib/openblas-base//include/ | sed 's/^\([^ ]\)/obj\/\1/g' | sed 's/\($*\)\.o[ :]*/\1.o : /g' > obj/objfile.dep clang: warning: -lmpi_cxx: 'linker' input unused [-Wunused-command-line-argument] clang: warning: -lmpi: 'linker' input unused [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-L/usr/lib/x86_64-linux-gnu/openmpi/lib' [-Wunused-command-line-argument] In file included from base/PrintController.cpp:30: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/MallocerFreer.cpp:34: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. mpi/MpiProcess.cpp:26:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from mpi/AsyncCommunicator.cpp:34: mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from wrappers/Blas.cpp:34: wrappers/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from wrappers/Lapack.cpp:33: wrappers/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/Utilities.cpp:26:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/MathUtilities.cpp:33: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/Parameters.cpp:36: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Atom.cpp:35: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Hatom.cpp:33: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Liatom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Catom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Natom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Oatom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/Satom.cpp:32: base/atoms/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/atoms/mm/EnvironmentalPointCharge.cpp:32: base/atoms/mm/../../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/factories/AtomFactory.cpp:32: base/factories/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/Molecule.cpp:27:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/InputParser.cpp:37: base/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/loggers/MOLogger.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/loggers/DensityLogger.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/loggers/HoleDensityLogger.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/loggers/ParticleDensityLogger.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. cndo/Cndo2.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from indo/Indo.cpp:35: indo/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. zindo/ZindoS.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. mndo/Mndo.cpp:27:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from am1/Am1.cpp:33: am1/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from am1/Am1D.cpp:32: am1/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from pm3/Pm3.cpp:33: pm3/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from pm3/Pm3D.cpp:33: pm3/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from pm3/Pm3Pddg.cpp:33: pm3/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/factories/ElectronicStructureFactory.cpp:33: base/factories/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from md/MD.cpp:36: md/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from mc/MC.cpp:36: mc/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from rpmd/RPMD.cpp:36: rpmd/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from nasco/NASCO.cpp:36: nasco/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/Optimizer.cpp:37: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/ConjugateGradient.cpp:36: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/SteepestDescent.cpp:36: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/BFGS.cpp:39: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from optimization/GEDIIS.cpp:38: optimization/../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from base/factories/OptimizerFactory.cpp:34: base/factories/../../mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. base/MolDS.cpp:29:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from Main.cpp:32: ./mpi/MpiProcess.h:22:9: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. mpicxx -I/usr/include/mpi -I/usr/lib/openblas-base//include/ -o obj/Enums.o base/Enums.cpp -g -Wall -fopenmp -O2 -fopenmp -c mpicxx -I/usr/include/mpi -I/usr/lib/openblas-base//include/ -o obj/PrintController.o -g -Wall -fopenmp -O2 -fopenmp -c clang: error: no input files make[2]: *** [Makefile_GNU:56: obj/PrintController.o] Error 1 make[2]: Leaving directory '/<>/src' make[1]: *** [debian/rules:31: override_dh_auto_build] Error 2 make[1]: Leaving directory '/<>' make: *** [debian/rules:24: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2018-05-02T12:40:48Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 6616 Build-Time: 35 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 14 Job: molds_0.3.1-1 Machine Architecture: amd64 Package: molds Package-Time: 63 Source-Version: 0.3.1-1 Space: 6616 Status: attempted Version: 0.3.1-1 -------------------------------------------------------------------------------- Finished at 2018-05-02T12:40:48Z Build needed 00:01:03, 6616k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 64.306042623s DC-Time-Estimation: 64.306042623 versus expected 408 (r/m: 5.344660367174777 ; m: 64.306042623)