DC-Build-Header: stimfit 0.15.6-1 / 2018-05-02 12:41:46 +0000 DC-Task: type:rebuild-binarch-only source:stimfit version:0.15.6-1 chroot:unstable esttime:379 logfile:/tmp/stimfit_0.15.6-1_unstable_clang60.log modes:clang60:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang60 stimfit_0.15.6-1' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-13-165.eu-central-1.compute.internal +==============================================================================+ | stimfit 0.15.6-1 (amd64) Wed, 02 May 2018 12:41:46 +0000 | +==============================================================================+ Package: stimfit Version: 0.15.6-1 Source Version: 0.15.6-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-0291dc7c-6d99-4678-994c-82dd25295c99' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang60 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=6.0 + echo 'Install of clang-6.0' Install of clang-6.0 + apt-get update Get:1 http://127.0.0.1:9999/debian unstable InRelease [242 kB] Get:2 http://127.0.0.1:9999/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Sources 2018-05-02-0830.09.pdiff [16.2 kB] Get:4 http://127.0.0.1:9999/debian unstable/main Sources 2018-05-02-0830.09.pdiff [16.2 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2018-05-02-0830.09.pdiff [1781 B] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 Packages 2018-05-02-0830.09.pdiff [1781 B] Get:6 http://127.0.0.1:9999/debian unstable/main Translation-en [6016 kB] Fetched 6332 kB in 2s (3179 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-6.0 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-6.0-doc Recommended packages: llvm-6.0-dev python libomp-dev libgpm2 The following NEW packages will be installed: clang-6.0 lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. Need to get 37.7 MB of archives. After this operation, 187 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.7-1 [92.1 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5 amd64 6.1+20180210-2 [95.7 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20170329-1 [85.2 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libllvm6.0 amd64 1:6.0-3 [14.5 MB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 8-20180425-1 [52.4 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-7-dev amd64 7.3.0-17 [204 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libc6-i386 amd64 2.27-3 [2855 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 lib32gcc1 amd64 1:8-20180425-1 [47.8 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 lib32stdc++6 amd64 8-20180425-1 [406 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-6.0-dev amd64 1:6.0-3 [3102 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-6.0 amd64 1:6.0-3 [6995 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 clang-6.0 amd64 1:6.0-3 [9175 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 37.7 MB in 0s (97.2 MB/s) Selecting previously unselected package libjsoncpp1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10022 files and directories currently installed.) Preparing to unpack .../00-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../01-libbsd0_0.8.7-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.7-1) ... Selecting previously unselected package libncurses5:amd64. Preparing to unpack .../02-libncurses5_6.1+20180210-2_amd64.deb ... Unpacking libncurses5:amd64 (6.1+20180210-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../03-libedit2_3.1-20170329-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20170329-1) ... Selecting previously unselected package libllvm6.0:amd64. Preparing to unpack .../04-libllvm6.0_1%3a6.0-3_amd64.deb ... Unpacking libllvm6.0:amd64 (1:6.0-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../05-libobjc4_8-20180425-1_amd64.deb ... Unpacking libobjc4:amd64 (8-20180425-1) ... Selecting previously unselected package libobjc-7-dev:amd64. Preparing to unpack .../06-libobjc-7-dev_7.3.0-17_amd64.deb ... Unpacking libobjc-7-dev:amd64 (7.3.0-17) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../07-libc6-i386_2.27-3_amd64.deb ... Unpacking libc6-i386 (2.27-3) ... Selecting previously unselected package lib32gcc1. Preparing to unpack .../08-lib32gcc1_1%3a8-20180425-1_amd64.deb ... Unpacking lib32gcc1 (1:8-20180425-1) ... Selecting previously unselected package lib32stdc++6. Preparing to unpack .../09-lib32stdc++6_8-20180425-1_amd64.deb ... Unpacking lib32stdc++6 (8-20180425-1) ... Selecting previously unselected package libclang-common-6.0-dev. Preparing to unpack .../10-libclang-common-6.0-dev_1%3a6.0-3_amd64.deb ... Unpacking libclang-common-6.0-dev (1:6.0-3) ... Selecting previously unselected package libclang1-6.0:amd64. Preparing to unpack .../11-libclang1-6.0_1%3a6.0-3_amd64.deb ... Unpacking libclang1-6.0:amd64 (1:6.0-3) ... Selecting previously unselected package clang-6.0. Preparing to unpack .../12-clang-6.0_1%3a6.0-3_amd64.deb ... Unpacking clang-6.0 (1:6.0-3) ... Setting up libncurses5:amd64 (6.1+20180210-2) ... Setting up libobjc4:amd64 (8-20180425-1) ... Setting up libc6-i386 (2.27-3) ... Setting up libbsd0:amd64 (0.8.7-1) ... Setting up libobjc-7-dev:amd64 (7.3.0-17) ... Processing triggers for libc-bin (2.27-3) ... Setting up lib32gcc1 (1:8-20180425-1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libllvm6.0:amd64 (1:6.0-3) ... Setting up libclang1-6.0:amd64 (1:6.0-3) ... Setting up lib32stdc++6 (8-20180425-1) ... Setting up libclang-common-6.0-dev (1:6.0-3) ... Setting up clang-6.0 (1:6.0-3) ... Processing triggers for libc-bin (2.27-3) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-6.0 g++-4.6 + ln -s clang-6.0 gcc-4.6 + ln -s clang-6.0 cpp-4.6 + ln -s clang-6.0 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-6.0 g++-4.7 + ln -s clang-6.0 gcc-4.7 + ln -s clang-6.0 cpp-4.7 + ln -s clang-6.0 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-6.0 g++-4.8 + ln -s clang-6.0 gcc-4.8 + ln -s clang-6.0 cpp-4.8 + ln -s clang-6.0 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-6.0 g++-4.9 + ln -s clang-6.0 gcc-4.9 + ln -s clang-6.0 cpp-4.9 + ln -s clang-6.0 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-6.0 g++-5 + ln -s clang-6.0 gcc-5 + ln -s clang-6.0 cpp-5 + ln -s clang-6.0 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-6.0 g++-6 + ln -s clang-6.0 gcc-6 + ln -s clang-6.0 cpp-6 + ln -s clang-6.0 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-6.0 g++-7 + ln -s clang-6.0 gcc-7 + ln -s clang-6.0 cpp-7 + ln -s clang-6.0 gcc + echo 'gcc-7 hold' + dpkg --set-selections + echo 'g++-7 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-6.0 g++-8 + ln -s clang-6.0 gcc-8 + ln -s clang-6.0 cpp-8 + ln -s clang-6.0 gcc + echo 'gcc-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + cd - /build/stimfit-ktpWCU + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang60'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... Need to get 2659 kB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main stimfit 0.15.6-1 (dsc) [2217 B] Get:2 http://127.0.0.1:9999/debian unstable/main stimfit 0.15.6-1 (tar) [2649 kB] Get:3 http://127.0.0.1:9999/debian unstable/main stimfit 0.15.6-1 (diff) [8476 B] Fetched 2659 kB in 0s (12.7 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/stimfit-ktpWCU/stimfit-0.15.6' with '<>' I: NOTICE: Log filtering will replace 'build/stimfit-ktpWCU' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-nbSZ9n/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-nbSZ9n/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nbSZ9n/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-nbSZ9n/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nbSZ9n/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-nbSZ9n/apt_archive ./ Packages [433 B] Fetched 1739 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-nbSZ9n/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10771 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 9), dh-python, libboost-dev (>= 1.40.0), python-all-dev (>= 2.6.6-3), python-numpy, libhdf5-dev, swig, python-wxgtk3.0 | python-wxgtk2.8 (>= 2.8.9), python-wxgtk3.0-dev | libwxgtk2.8-dev (>= 2.8.9), libwxgtk3.0-dev | libwxgtk2.8-dev (>= 2.8.9), libfftw3-dev, liblapack-dev, chrpath, help2man, libsuitesparse-dev, zlib1g-dev, dh-autoreconf, pkg-config Filtered Build-Depends: debhelper (>= 9), dh-python, libboost-dev (>= 1.40.0), python-all-dev (>= 2.6.6-3), python-numpy, libhdf5-dev, swig, python-wxgtk3.0, python-wxgtk3.0-dev, libwxgtk3.0-dev, libfftw3-dev, liblapack-dev, chrpath, help2man, libsuitesparse-dev, zlib1g-dev, dh-autoreconf, pkg-config dpkg-deb: building package 'sbuild-build-depends-stimfit-dummy' in '/<>/resolver-nbSZ9n/apt_archive/sbuild-build-depends-stimfit-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-stimfit-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-nbSZ9n/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nbSZ9n/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-nbSZ9n/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nbSZ9n/apt_archive ./ Sources [639 B] Get:5 copy:/<>/resolver-nbSZ9n/apt_archive ./ Packages [695 B] Fetched 2297 B in 0s (0 B/s) Reading package lists... Reading package lists... Install stimfit build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: adwaita-icon-theme autoconf automake autopoint autotools-dev bsdmainutils cgmanager chrpath dbus dbus-user-session dconf-gsettings-backend dconf-service debhelper dh-autoreconf dh-python dh-strip-nondeterminism dmsetup file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base glib-networking glib-networking-common glib-networking-services groff-base gsettings-desktop-schemas gtk-update-icon-cache hdf5-helpers help2man hicolor-icon-theme intltool-debian libaec-dev libaec0 libamd2 libapparmor1 libarchive-zip-perl libargon2-0 libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3 libboost-dev libboost1.62-dev libbtf1 libcairo-gobject2 libcairo2 libcamd2 libcap2 libccolamd2 libcgmanager0 libcholmod3 libcolamd2 libcolord2 libcroco3 libcryptsetup12 libcups2 libcxsparse3 libdatrie1 libdbus-1-3 libdconf1 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libegl-mesa0 libegl1 libelf1 libepoxy0 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgbm1 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran4 libgl1 libgl1-mesa-dev libgl1-mesa-dri libglapi-mesa libgles2 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgraphblas2 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0 libgtk-3-common libgtk2.0-0 libgtk2.0-common libharfbuzz0b libhdf5-100 libhdf5-cpp-100 libhdf5-dev libice6 libicu57 libidn11 libip4tc0 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjson-c3 libjson-glib-1.0-0 libjson-glib-1.0-common libk5crypto3 libkeyutils1 libklu1 libkmod2 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldl2 libllvm5.0 liblocale-gettext-perl libmagic-mgc libmagic1 libmetis5 libmpdec2 libncursesw6 libnih-dbus1 libnih1 libnotify4 libopengl0 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpipeline1 libpixman-1-0 libpng16-16 libprocps6 libproxy1v5 libpthread-stubs0-dev libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.6-minimal libpython3.6-stdlib librbio2 libreadline7 librest-0.7-0 librsvg2-2 librsvg2-common libsensors4 libsigsegv2 libsm6 libsoup-gnome2.4-1 libsoup2.4-1 libspqr2 libsqlite3-0 libssl1.1 libsuitesparse-dev libsuitesparseconfig5 libsz2 libthai-data libthai0 libtiff5 libtimedate-perl libtool libumfpack5 libwayland-client0 libwayland-cursor0 libwayland-egl1-mesa libwayland-server0 libwxbase3.0-0v5 libwxbase3.0-dev libwxgtk3.0-0v5 libwxgtk3.0-dev libwxgtk3.0-gtk3-0v5 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxrandr2 libxrender1 libxshmfence-dev libxshmfence1 libxxf86vm-dev libxxf86vm1 lsb-base m4 man-db mesa-common-dev mime-support pkg-config po-debconf procps python python-all python-all-dev python-dev python-minimal python-numpy python-wxgtk3.0 python-wxgtk3.0-dev python-wxversion python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.6 python3.6-minimal readline-common shared-mime-info swig swig3.0 systemd systemd-shim ucf wx-common wx3.0-headers x11-common x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff liblapack-doc libboost-doc libboost1.62-doc libboost-atomic1.62-dev libboost-chrono1.62-dev libboost-context1.62-dev libboost-coroutine1.62-dev libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev libboost-filesystem1.62-dev libboost-graph1.62-dev libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev libboost-mpi1.62-dev libboost-mpi-python1.62-dev libboost-program-options1.62-dev libboost-python1.62-dev libboost-random1.62-dev libboost-regex1.62-dev libboost-serialization1.62-dev libboost-signals1.62-dev libboost-system1.62-dev libboost-test1.62-dev libboost-thread1.62-dev libboost-timer1.62-dev libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev libmpfrc++-dev libntl-dev colord cups-common libfftw3-doc krb5-doc krb5-user gvfs libhdf5-doc liblcms2-utils pciutils librsvg2-bin lm-sensors libtool-doc gfortran | fortran95-compiler gcj-jdk wx3.0-doc libxcb-doc libxext-doc m4-doc apparmor less www-browser libmail-box-perl python-doc python-tk gfortran python-nose python-numpy-dbg python-numpy-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3.6-venv python3.6-doc readline-doc swig-doc swig-examples swig3.0-examples swig3.0-doc systemd-container policykit-1 pm-utils Recommended packages: systemd-sysv python3-distutils curl | wget | lynx at-spi2-core libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs libgtk-3-bin libgail-common libgtk2.0-bin krb5-locales libgpm2 notification-daemon libltdl-dev libx11-doc libmail-sendmail-perl psmisc zip The following NEW packages will be installed: adwaita-icon-theme autoconf automake autopoint autotools-dev bsdmainutils cgmanager chrpath dbus dbus-user-session dconf-gsettings-backend dconf-service debhelper dh-autoreconf dh-python dh-strip-nondeterminism dmsetup file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base glib-networking glib-networking-common glib-networking-services groff-base gsettings-desktop-schemas gtk-update-icon-cache hdf5-helpers help2man hicolor-icon-theme intltool-debian libaec-dev libaec0 libamd2 libapparmor1 libarchive-zip-perl libargon2-0 libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3 libboost-dev libboost1.62-dev libbtf1 libcairo-gobject2 libcairo2 libcamd2 libcap2 libccolamd2 libcgmanager0 libcholmod3 libcolamd2 libcolord2 libcroco3 libcryptsetup12 libcups2 libcxsparse3 libdatrie1 libdbus-1-3 libdconf1 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libegl-mesa0 libegl1 libelf1 libepoxy0 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgbm1 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran4 libgl1 libgl1-mesa-dev libgl1-mesa-dri libglapi-mesa libgles2 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgraphblas2 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0 libgtk-3-common libgtk2.0-0 libgtk2.0-common libharfbuzz0b libhdf5-100 libhdf5-cpp-100 libhdf5-dev libice6 libicu57 libidn11 libip4tc0 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjson-c3 libjson-glib-1.0-0 libjson-glib-1.0-common libk5crypto3 libkeyutils1 libklu1 libkmod2 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldl2 libllvm5.0 liblocale-gettext-perl libmagic-mgc libmagic1 libmetis5 libmpdec2 libncursesw6 libnih-dbus1 libnih1 libnotify4 libopengl0 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpipeline1 libpixman-1-0 libpng16-16 libprocps6 libproxy1v5 libpthread-stubs0-dev libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.6-minimal libpython3.6-stdlib librbio2 libreadline7 librest-0.7-0 librsvg2-2 librsvg2-common libsensors4 libsigsegv2 libsm6 libsoup-gnome2.4-1 libsoup2.4-1 libspqr2 libsqlite3-0 libssl1.1 libsuitesparse-dev libsuitesparseconfig5 libsz2 libthai-data libthai0 libtiff5 libtimedate-perl libtool libumfpack5 libwayland-client0 libwayland-cursor0 libwayland-egl1-mesa libwayland-server0 libwxbase3.0-0v5 libwxbase3.0-dev libwxgtk3.0-0v5 libwxgtk3.0-dev libwxgtk3.0-gtk3-0v5 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxrandr2 libxrender1 libxshmfence-dev libxshmfence1 libxxf86vm-dev libxxf86vm1 lsb-base m4 man-db mesa-common-dev mime-support pkg-config po-debconf procps python python-all python-all-dev python-dev python-minimal python-numpy python-wxgtk3.0 python-wxgtk3.0-dev python-wxversion python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.6 python3.6-minimal readline-common sbuild-build-depends-stimfit-dummy shared-mime-info swig swig3.0 systemd systemd-shim ucf wx-common wx3.0-headers x11-common x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 298 newly installed, 0 to remove and 0 not upgraded. Need to get 174 MB of archives. After this operation, 824 MB of additional disk space will be used. Get:1 copy:/<>/resolver-nbSZ9n/apt_archive ./ sbuild-build-depends-stimfit-dummy 0.invalid.0 [988 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libapparmor1 amd64 2.12-4 [85.0 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libcap2 amd64 1:2.25-1.2 [17.2 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libargon2-0 amd64 0~20161029-2 [20.3 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 dmsetup amd64 2:1.02.145-4.1 [89.6 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libdevmapper1.02.1 amd64 2:1.02.145-4.1 [140 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libjson-c3 amd64 0.12.1-1.3 [26.1 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libcryptsetup12 amd64 2:2.0.2-1 [170 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 libidn11 amd64 1.33-2.2 [116 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libip4tc0 amd64 1.6.2-1 [68.3 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libkmod2 amd64 25-1 [50.7 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libprocps6 amd64 2:3.3.14-1 [60.4 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 lsb-base all 9.20170808 [28.1 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 procps amd64 2:3.3.14-1 [257 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 systemd amd64 238-4 [3057 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 11.1.2 [190 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-10 [1176 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.5.0-1 [29.0 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.8.3-2 [1180 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-minimal amd64 2.7.15-1 [393 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-minimal amd64 2.7.15-1 [1353 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 python-minimal amd64 2.7.15~rc1-1 [41.1 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 mime-support all 3.60 [36.7 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.5-3 [96.8 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 libncursesw6 amd64 6.1+20180210-2 [131 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 7.0-3 [70.4 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 libreadline7 amd64 7.0-3+b1 [151 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.23.1-1 [603 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.1 amd64 1.1.0h-2 [1352 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-stdlib amd64 2.7.15-1 [1912 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 python2.7 amd64 2.7.15-1 [298 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 libpython-stdlib amd64 2.7.15~rc1-1 [20.5 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unstable/main amd64 libdbus-1-3 amd64 1.12.8-1 [209 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 dbus amd64 1.12.8-1 [231 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.33-2 [234 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.33-2 [113 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.33-2 [65.6 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-6 [122 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.56.1-2 [2928 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 libnih1 amd64 1.0.3-10+b1 [127 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 libnih-dbus1 amd64 1.0.3-10+b1 [98.0 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 libcgmanager0 amd64 0.41-2 [41.1 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 cgmanager amd64 0.41-2 [84.0 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 systemd-shim amd64 10-3 [20.0 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 libpam-systemd amd64 238-4 [187 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 ucf all 3.0038 [67.8 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 hicolor-icon-theme all 0.17-2 [11.4 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libpng16-16 amd64 1.6.34-1 [287 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5 amd64 4.0.9-5 [246 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 libxcb1 amd64 1.13-1 [136 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 libx11-data all 2:1.6.5-1 [292 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 libx11-6 amd64 2:1.6.5-1 [749 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-9 [7698 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-6.1 [725 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 shared-mime-info amd64 1.9-2 [753 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 libgdk-pixbuf2.0-common all 2.36.11-2 [312 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 libgdk-pixbuf2.0-0 amd64 2.36.11-2 [172 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 gtk-update-icon-cache amd64 3.22.30-1 [78.8 kB] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 libfreetype6 amd64 2.8.1-2 [461 kB] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig-config all 2.13.0-4 [280 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 libfontconfig1 amd64 2.13.0-4 [343 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 libpixman-1-0 amd64 0.34.0-2 [529 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-render0 amd64 1.13-1 [108 kB] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-shm0 amd64 1.13-1 [98.3 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 libcairo2 amd64 1.15.10-3 [664 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-2 [144 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 fontconfig amd64 2.13.0-4 [405 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 libfribidi0 amd64 0.19.7-2 [45.5 kB] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libthai-data all 0.1.27-2 [168 kB] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 libdatrie1 amd64 0.2.11-1 [37.9 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libthai0 amd64 0.1.27-2 [53.3 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 libpango-1.0-0 amd64 1.42.1-1 [175 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libgraphite2-3 amd64 1.3.11-2 [85.2 kB] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 libharfbuzz0b amd64 1.7.6-1 [842 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.42.1-1 [59.6 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.42.1-1 [48.0 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 librsvg2-2 amd64 2.40.20-2 [302 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 librsvg2-common amd64 2.40.20-2 [210 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 adwaita-icon-theme all 3.28.0-1 [11.7 MB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-3.1 [736 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-6 [434 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 chrpath amd64 0.16-2+b1 [17.1 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 dbus-user-session amd64 1.12.8-1 [89.8 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 libdconf1 amd64 0.28.0-2 [37.2 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 dconf-service amd64 0.28.0-2 [34.5 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 dconf-gsettings-backend amd64 0.28.0-2 [26.2 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2.1 [547 kB] Get:109 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 17 [16.5 kB] Get:110 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.60-1 [95.6 kB] Get:111 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.041-1 [19.9 kB] Get:112 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:113 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.041-1 [12.0 kB] Get:114 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-6 [1302 kB] Get:115 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:116 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:117 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 11.2.1 [1013 kB] Get:118 http://127.0.0.1:9999/debian unstable/main amd64 dh-python all 3.20180326 [93.2 kB] Get:119 http://127.0.0.1:9999/debian unstable/main amd64 libproxy1v5 amd64 0.4.15-1 [56.2 kB] Get:120 http://127.0.0.1:9999/debian unstable/main amd64 glib-networking-common all 2.56.0-1 [55.4 kB] Get:121 http://127.0.0.1:9999/debian unstable/main amd64 glib-networking-services amd64 2.56.0-1 [12.7 kB] Get:122 http://127.0.0.1:9999/debian unstable/main amd64 gsettings-desktop-schemas all 3.28.0-1 [522 kB] Get:123 http://127.0.0.1:9999/debian unstable/main amd64 glib-networking amd64 2.56.0-1 [62.4 kB] Get:124 http://127.0.0.1:9999/debian unstable/main amd64 hdf5-helpers amd64 1.10.0-patch1+docs-4+b1 [36.3 kB] Get:125 http://127.0.0.1:9999/debian unstable/main amd64 help2man amd64 1.47.6 [169 kB] Get:126 http://127.0.0.1:9999/debian unstable/main amd64 libaec0 amd64 1.0.2-1 [20.1 kB] Get:127 http://127.0.0.1:9999/debian unstable/main amd64 libsz2 amd64 1.0.2-1 [6676 B] Get:128 http://127.0.0.1:9999/debian unstable/main amd64 libaec-dev amd64 1.0.2-1 [18.4 kB] Get:129 http://127.0.0.1:9999/debian unstable/main amd64 libsuitesparseconfig5 amd64 1:5.2.0+dfsg-1 [20.5 kB] Get:130 http://127.0.0.1:9999/debian unstable/main amd64 libamd2 amd64 1:5.2.0+dfsg-1 [33.1 kB] Get:131 http://127.0.0.1:9999/debian unstable/main amd64 libatk1.0-data all 2.28.1-1 [145 kB] Get:132 http://127.0.0.1:9999/debian unstable/main amd64 libatk1.0-0 amd64 2.28.1-1 [50.1 kB] Get:133 http://127.0.0.1:9999/debian unstable/main amd64 libatspi2.0-0 amd64 2.28.0-3 [64.1 kB] Get:134 http://127.0.0.1:9999/debian unstable/main amd64 libatk-bridge2.0-0 amd64 2.26.2-1 [61.5 kB] Get:135 http://127.0.0.1:9999/debian unstable/main amd64 libavahi-common-data amd64 0.7-4 [122 kB] Get:136 http://127.0.0.1:9999/debian unstable/main amd64 libavahi-common3 amd64 0.7-4 [54.4 kB] Get:137 http://127.0.0.1:9999/debian unstable/main amd64 libavahi-client3 amd64 0.7-4 [57.8 kB] Get:138 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran4 amd64 7.3.0-17 [487 kB] Get:139 http://127.0.0.1:9999/debian unstable/main amd64 libblas3 amd64 3.8.0-1 [150 kB] Get:140 http://127.0.0.1:9999/debian unstable/main amd64 libblas-dev amd64 3.8.0-1 [156 kB] Get:141 http://127.0.0.1:9999/debian unstable/main amd64 libboost1.62-dev amd64 1.62.0+dfsg-5+b1 [7004 kB] Get:142 http://127.0.0.1:9999/debian unstable/main amd64 libboost-dev amd64 1.62.0.1 [3632 B] Get:143 http://127.0.0.1:9999/debian unstable/main amd64 libbtf1 amd64 1:5.2.0+dfsg-1 [22.1 kB] Get:144 http://127.0.0.1:9999/debian unstable/main amd64 libcairo-gobject2 amd64 1.15.10-3 [102 kB] Get:145 http://127.0.0.1:9999/debian unstable/main amd64 libcamd2 amd64 1:5.2.0+dfsg-1 [34.5 kB] Get:146 http://127.0.0.1:9999/debian unstable/main amd64 libccolamd2 amd64 1:5.2.0+dfsg-1 [35.3 kB] Get:147 http://127.0.0.1:9999/debian unstable/main amd64 libcolamd2 amd64 1:5.2.0+dfsg-1 [29.8 kB] Get:148 http://127.0.0.1:9999/debian unstable/main amd64 liblapack3 amd64 3.8.0-1 [2146 kB] Get:149 http://127.0.0.1:9999/debian unstable/main amd64 libmetis5 amd64 5.1.0.dfsg-5+b2 [175 kB] Get:150 http://127.0.0.1:9999/debian unstable/main amd64 libcholmod3 amd64 1:5.2.0+dfsg-1 [315 kB] Get:151 http://127.0.0.1:9999/debian unstable/main amd64 liblcms2-2 amd64 2.9-1 [145 kB] Get:152 http://127.0.0.1:9999/debian unstable/main amd64 libcolord2 amd64 1.3.3-2 [252 kB] Get:153 http://127.0.0.1:9999/debian unstable/main amd64 libkeyutils1 amd64 1.5.9-9.2 [12.9 kB] Get:154 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5support0 amd64 1.16-2 [62.8 kB] Get:155 http://127.0.0.1:9999/debian unstable/main amd64 libk5crypto3 amd64 1.16-2 [121 kB] Get:156 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5-3 amd64 1.16-2 [316 kB] Get:157 http://127.0.0.1:9999/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.16-2 [158 kB] Get:158 http://127.0.0.1:9999/debian unstable/main amd64 libcups2 amd64 2.2.7-3 [320 kB] Get:159 http://127.0.0.1:9999/debian unstable/main amd64 libcxsparse3 amd64 1:5.2.0+dfsg-1 [77.3 kB] Get:160 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-common all 2.4.91-2 [13.5 kB] Get:161 http://127.0.0.1:9999/debian unstable/main amd64 libdrm2 amd64 2.4.91-2 [39.9 kB] Get:162 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.91-2 [28.4 kB] Get:163 http://127.0.0.1:9999/debian unstable/main amd64 libpciaccess0 amd64 0.14-1 [53.5 kB] Get:164 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-intel1 amd64 2.4.91-2 [69.3 kB] Get:165 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.91-2 [31.1 kB] Get:166 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-nouveau2 amd64 2.4.91-2 [26.0 kB] Get:167 http://127.0.0.1:9999/debian unstable/main amd64 libdrm-dev amd64 2.4.91-2 [247 kB] Get:168 http://127.0.0.1:9999/debian unstable/main amd64 libwayland-server0 amd64 1.15.0-1 [32.0 kB] Get:169 http://127.0.0.1:9999/debian unstable/main amd64 libgbm1 amd64 17.3.9-1 [63.7 kB] Get:170 http://127.0.0.1:9999/debian unstable/main amd64 libglapi-mesa amd64 17.3.9-1 [61.4 kB] Get:171 http://127.0.0.1:9999/debian unstable/main amd64 libwayland-client0 amd64 1.15.0-1 [26.1 kB] Get:172 http://127.0.0.1:9999/debian unstable/main amd64 libx11-xcb1 amd64 2:1.6.5-1 [185 kB] Get:173 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-dri2-0 amd64 1.13-1 [99.6 kB] Get:174 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-dri3-0 amd64 1.13-1 [99.3 kB] Get:175 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-present0 amd64 1.13-1 [98.2 kB] Get:176 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-sync1 amd64 1.13-1 [102 kB] Get:177 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-xfixes0 amd64 1.13-1 [102 kB] Get:178 http://127.0.0.1:9999/debian unstable/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get:179 http://127.0.0.1:9999/debian unstable/main amd64 libegl-mesa0 amd64 17.3.9-1 [122 kB] Get:180 http://127.0.0.1:9999/debian unstable/main amd64 libelf1 amd64 0.170-0.4 [162 kB] Get:181 http://127.0.0.1:9999/debian unstable/main amd64 libepoxy0 amd64 1.4.3-1 [234 kB] Get:182 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1-dev amd64 2.2.5-3 [140 kB] Get:183 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-double3 amd64 3.3.7-1+b1 [740 kB] Get:184 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-long3 amd64 3.3.7-1+b1 [315 kB] Get:185 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.7-1+b1 [559 kB] Get:186 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-single3 amd64 3.3.7-1+b1 [770 kB] Get:187 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-bin amd64 3.3.7-1+b1 [51.0 kB] Get:188 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-dev amd64 3.3.7-1+b1 [2128 kB] Get:189 http://127.0.0.1:9999/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1 [21.9 kB] Get:190 http://127.0.0.1:9999/debian unstable/main amd64 x11proto-dev all 2018.4-4 [251 kB] Get:191 http://127.0.0.1:9999/debian unstable/main amd64 x11proto-core-dev all 2018.4-4 [3128 B] Get:192 http://127.0.0.1:9999/debian unstable/main amd64 libxau-dev amd64 1:1.0.8-1+b2 [23.1 kB] Get:193 http://127.0.0.1:9999/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [42.2 kB] Get:194 http://127.0.0.1:9999/debian unstable/main amd64 xtrans-dev all 1.3.5-1 [100 kB] Get:195 http://127.0.0.1:9999/debian unstable/main amd64 libpthread-stubs0-dev amd64 0.3-4 [3866 B] Get:196 http://127.0.0.1:9999/debian unstable/main amd64 libxcb1-dev amd64 1.13-1 [173 kB] Get:197 http://127.0.0.1:9999/debian unstable/main amd64 libx11-dev amd64 2:1.6.5-1 [817 kB] Get:198 http://127.0.0.1:9999/debian unstable/main amd64 mesa-common-dev amd64 17.3.9-1 [567 kB] Get:199 http://127.0.0.1:9999/debian unstable/main amd64 libglvnd0 amd64 1.0.0+git20180308-2 [47.7 kB] Get:200 http://127.0.0.1:9999/debian unstable/main amd64 libglvnd-core-dev amd64 1.0.0+git20180308-2 [13.0 kB] Get:201 http://127.0.0.1:9999/debian unstable/main amd64 libegl1 amd64 1.0.0+git20180308-2 [33.7 kB] Get:202 http://127.0.0.1:9999/debian unstable/main amd64 libgles2 amd64 1.0.0+git20180308-2 [19.0 kB] Get:203 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-glx0 amd64 1.13-1 [115 kB] Get:204 http://127.0.0.1:9999/debian unstable/main amd64 libxfixes3 amd64 1:5.0.3-1 [21.9 kB] Get:205 http://127.0.0.1:9999/debian unstable/main amd64 libxdamage1 amd64 1:1.1.4-3 [14.4 kB] Get:206 http://127.0.0.1:9999/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:207 http://127.0.0.1:9999/debian unstable/main amd64 libllvm5.0 amd64 1:5.0.1-4 [13.7 MB] Get:208 http://127.0.0.1:9999/debian unstable/main amd64 libsensors4 amd64 1:3.4.0-4 [53.3 kB] Get:209 http://127.0.0.1:9999/debian unstable/main amd64 libgl1-mesa-dri amd64 17.3.9-1 [5907 kB] Get:210 http://127.0.0.1:9999/debian unstable/main amd64 libglx-mesa0 amd64 17.3.9-1 [171 kB] Get:211 http://127.0.0.1:9999/debian unstable/main amd64 libglx0 amd64 1.0.0+git20180308-2 [29.9 kB] Get:212 http://127.0.0.1:9999/debian unstable/main amd64 libgl1 amd64 1.0.0+git20180308-2 [86.3 kB] Get:213 http://127.0.0.1:9999/debian unstable/main amd64 libopengl0 amd64 1.0.0+git20180308-2 [33.0 kB] Get:214 http://127.0.0.1:9999/debian unstable/main amd64 libglvnd-dev amd64 1.0.0+git20180308-2 [4940 B] Get:215 http://127.0.0.1:9999/debian unstable/main amd64 libx11-xcb-dev amd64 2:1.6.5-1 [187 kB] Get:216 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-dri3-dev amd64 1.13-1 [100 kB] Get:217 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-randr0 amd64 1.13-1 [110 kB] Get:218 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-render0-dev amd64 1.13-1 [111 kB] Get:219 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-randr0-dev amd64 1.13-1 [113 kB] Get:220 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-shape0 amd64 1.13-1 [98.6 kB] Get:221 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-shape0-dev amd64 1.13-1 [99.9 kB] Get:222 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-xfixes0-dev amd64 1.13-1 [104 kB] Get:223 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-sync-dev amd64 1.13-1 [103 kB] Get:224 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-present-dev amd64 1.13-1 [99.7 kB] Get:225 http://127.0.0.1:9999/debian unstable/main amd64 libxshmfence-dev amd64 1.3-1 [8360 B] Get:226 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-dri2-0-dev amd64 1.13-1 [101 kB] Get:227 http://127.0.0.1:9999/debian unstable/main amd64 libxcb-glx0-dev amd64 1.13-1 [121 kB] Get:228 http://127.0.0.1:9999/debian unstable/main amd64 x11proto-fixes-dev all 1:2018.4-4 [3140 B] Get:229 http://127.0.0.1:9999/debian unstable/main amd64 libxfixes-dev amd64 1:5.0.3-1 [23.8 kB] Get:230 http://127.0.0.1:9999/debian unstable/main amd64 x11proto-damage-dev all 1:2018.4-4 [3140 B] Get:231 http://127.0.0.1:9999/debian unstable/main amd64 libxdamage-dev amd64 1:1.1.4-3 [14.3 kB] Get:232 http://127.0.0.1:9999/debian unstable/main amd64 x11proto-xext-dev all 2018.4-4 [3128 B] Get:233 http://127.0.0.1:9999/debian unstable/main amd64 libxext-dev amd64 2:1.3.3-1+b2 [107 kB] Get:234 http://127.0.0.1:9999/debian unstable/main amd64 x11proto-xf86vidmode-dev all 2018.4-4 [3140 B] Get:235 http://127.0.0.1:9999/debian unstable/main amd64 libxxf86vm-dev amd64 1:1.1.4-1+b2 [25.4 kB] Get:236 http://127.0.0.1:9999/debian unstable/main amd64 x11proto-dri2-dev all 2018.4-4 [3132 B] Get:237 http://127.0.0.1:9999/debian unstable/main amd64 x11proto-gl-dev all 2018.4-4 [3124 B] Get:238 http://127.0.0.1:9999/debian unstable/main amd64 libgl1-mesa-dev amd64 17.3.9-1 [43.4 kB] Get:239 http://127.0.0.1:9999/debian unstable/main amd64 libglu1-mesa amd64 9.0.0-2.1 [168 kB] Get:240 http://127.0.0.1:9999/debian unstable/main amd64 libglu1-mesa-dev amd64 9.0.0-2.1 [202 kB] Get:241 http://127.0.0.1:9999/debian unstable/main amd64 libgraphblas2 amd64 1:5.2.0+dfsg-1 [406 kB] Get:242 http://127.0.0.1:9999/debian unstable/main amd64 libgtk-3-common all 3.22.30-1 [3493 kB] Get:243 http://127.0.0.1:9999/debian unstable/main amd64 libjson-glib-1.0-common all 1.4.2-4 [50.6 kB] Get:244 http://127.0.0.1:9999/debian unstable/main amd64 libjson-glib-1.0-0 amd64 1.4.2-4 [60.1 kB] Get:245 http://127.0.0.1:9999/debian unstable/main amd64 libsoup2.4-1 amd64 2.62.1-1 [305 kB] Get:246 http://127.0.0.1:9999/debian unstable/main amd64 libsoup-gnome2.4-1 amd64 2.62.1-1 [17.0 kB] Get:247 http://127.0.0.1:9999/debian unstable/main amd64 librest-0.7-0 amd64 0.8.0-2 [33.0 kB] Get:248 http://127.0.0.1:9999/debian unstable/main amd64 libwayland-cursor0 amd64 1.15.0-1 [13.6 kB] Get:249 http://127.0.0.1:9999/debian unstable/main amd64 libwayland-egl1-mesa amd64 17.3.9-1 [44.8 kB] Get:250 http://127.0.0.1:9999/debian unstable/main amd64 libxcomposite1 amd64 1:0.4.4-2 [16.5 kB] Get:251 http://127.0.0.1:9999/debian unstable/main amd64 libxcursor1 amd64 1:1.1.15-1 [36.4 kB] Get:252 http://127.0.0.1:9999/debian unstable/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB] Get:253 http://127.0.0.1:9999/debian unstable/main amd64 libxinerama1 amd64 2:1.1.3-1+b3 [16.7 kB] Get:254 http://127.0.0.1:9999/debian unstable/main amd64 xkb-data all 2.23.1-1 [675 kB] Get:255 http://127.0.0.1:9999/debian unstable/main amd64 libxkbcommon0 amd64 0.8.0-1 [123 kB] Get:256 http://127.0.0.1:9999/debian unstable/main amd64 libxrandr2 amd64 2:1.5.1-1 [37.5 kB] Get:257 http://127.0.0.1:9999/debian unstable/main amd64 libgtk-3-0 amd64 3.22.30-1 [2551 kB] Get:258 http://127.0.0.1:9999/debian unstable/main amd64 libgtk2.0-common all 2.24.32-1 [2698 kB] Get:259 http://127.0.0.1:9999/debian unstable/main amd64 libgtk2.0-0 amd64 2.24.32-1 [1803 kB] Get:260 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-100 amd64 1.10.0-patch1+docs-4+b1 [1284 kB] Get:261 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-cpp-100 amd64 1.10.0-patch1+docs-4+b1 [129 kB] Get:262 http://127.0.0.1:9999/debian unstable/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-1 [214 kB] Get:263 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:1.5.2-2+b1 [208 kB] Get:264 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get:265 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-dev amd64 1.10.0-patch1+docs-4+b1 [2529 kB] Get:266 http://127.0.0.1:9999/debian unstable/main amd64 x11-common all 1:7.7+19 [251 kB] Get:267 http://127.0.0.1:9999/debian unstable/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:268 http://127.0.0.1:9999/debian unstable/main amd64 libklu1 amd64 1:5.2.0+dfsg-1 [83.4 kB] Get:269 http://127.0.0.1:9999/debian unstable/main amd64 liblapack-dev amd64 3.8.0-1 [2174 kB] Get:270 http://127.0.0.1:9999/debian unstable/main amd64 libldl2 amd64 1:5.2.0+dfsg-1 [21.7 kB] Get:271 http://127.0.0.1:9999/debian unstable/main amd64 libnotify4 amd64 0.7.7-3 [22.0 kB] Get:272 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7 amd64 2.7.15-1 [1052 kB] Get:273 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-dev amd64 2.7.15-1 [28.3 MB] Get:274 http://127.0.0.1:9999/debian unstable/main amd64 libpython-dev amd64 2.7.15~rc1-1 [20.6 kB] Get:275 http://127.0.0.1:9999/debian unstable/main amd64 libpython-all-dev amd64 2.7.15~rc1-1 [1048 B] Get:276 http://127.0.0.1:9999/debian unstable/main amd64 librbio2 amd64 1:5.2.0+dfsg-1 [37.6 kB] Get:277 http://127.0.0.1:9999/debian unstable/main amd64 libsm6 amd64 2:1.2.2-1+b3 [33.3 kB] Get:278 http://127.0.0.1:9999/debian unstable/main amd64 libspqr2 amd64 1:5.2.0+dfsg-1 [78.3 kB] Get:279 http://127.0.0.1:9999/debian unstable/main amd64 libumfpack5 amd64 1:5.2.0+dfsg-1 [244 kB] Get:280 http://127.0.0.1:9999/debian unstable/main amd64 libsuitesparse-dev amd64 1:5.2.0+dfsg-1 [1252 kB] Get:281 http://127.0.0.1:9999/debian unstable/main amd64 libwxbase3.0-0v5 amd64 3.0.4+dfsg-3 [1061 kB] Get:282 http://127.0.0.1:9999/debian unstable/main amd64 wx3.0-headers all 3.0.4+dfsg-3 [1128 kB] Get:283 http://127.0.0.1:9999/debian unstable/main amd64 libwxbase3.0-dev amd64 3.0.4+dfsg-3 [138 kB] Get:284 http://127.0.0.1:9999/debian unstable/main amd64 libwxgtk3.0-0v5 amd64 3.0.4+dfsg-3 [4324 kB] Get:285 http://127.0.0.1:9999/debian unstable/main amd64 wx-common amd64 3.0.4+dfsg-3 [177 kB] Get:286 http://127.0.0.1:9999/debian unstable/main amd64 libwxgtk3.0-dev amd64 3.0.4+dfsg-3 [138 kB] Get:287 http://127.0.0.1:9999/debian unstable/main amd64 libwxgtk3.0-gtk3-0v5 amd64 3.0.4+dfsg-3 [4304 kB] Get:288 http://127.0.0.1:9999/debian unstable/main amd64 pkg-config amd64 0.29-4+b1 [63.3 kB] Get:289 http://127.0.0.1:9999/debian unstable/main amd64 python-all amd64 2.7.15~rc1-1 [1028 B] Get:290 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-dev amd64 2.7.15-1 [290 kB] Get:291 http://127.0.0.1:9999/debian unstable/main amd64 python-dev amd64 2.7.15~rc1-1 [1212 B] Get:292 http://127.0.0.1:9999/debian unstable/main amd64 python-all-dev amd64 2.7.15~rc1-1 [1052 B] Get:293 http://127.0.0.1:9999/debian unstable/main amd64 python-numpy amd64 1:1.13.3-2 [1950 kB] Get:294 http://127.0.0.1:9999/debian unstable/main amd64 python-wxversion all 3.0.2.0+dfsg-7 [114 kB] Get:295 http://127.0.0.1:9999/debian unstable/main amd64 python-wxgtk3.0 amd64 3.0.2.0+dfsg-7 [5284 kB] Get:296 http://127.0.0.1:9999/debian unstable/main amd64 python-wxgtk3.0-dev all 3.0.2.0+dfsg-7 [530 kB] Get:297 http://127.0.0.1:9999/debian unstable/main amd64 swig3.0 amd64 3.0.12-1 [1395 kB] Get:298 http://127.0.0.1:9999/debian unstable/main amd64 swig amd64 3.0.12-1 [309 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 174 MB in 2s (93.1 MB/s) Selecting previously unselected package libapparmor1:amd64. (Reading database ... 10771 files and directories currently installed.) Preparing to unpack .../00-libapparmor1_2.12-4_amd64.deb ... Unpacking libapparmor1:amd64 (2.12-4) ... Selecting previously unselected package libcap2:amd64. Preparing to unpack .../01-libcap2_1%3a2.25-1.2_amd64.deb ... Unpacking libcap2:amd64 (1:2.25-1.2) ... Selecting previously unselected package libargon2-0:amd64. Preparing to unpack .../02-libargon2-0_0~20161029-2_amd64.deb ... Unpacking libargon2-0:amd64 (0~20161029-2) ... Selecting previously unselected package dmsetup. Preparing to unpack .../03-dmsetup_2%3a1.02.145-4.1_amd64.deb ... Unpacking dmsetup (2:1.02.145-4.1) ... Selecting previously unselected package libdevmapper1.02.1:amd64. Preparing to unpack .../04-libdevmapper1.02.1_2%3a1.02.145-4.1_amd64.deb ... Unpacking libdevmapper1.02.1:amd64 (2:1.02.145-4.1) ... Selecting previously unselected package libjson-c3:amd64. Preparing to unpack .../05-libjson-c3_0.12.1-1.3_amd64.deb ... 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Setting up libxshmfence1:amd64 (1.3-1) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up libncursesw6:amd64 (6.1+20180210-2) ... Setting up libcap2:amd64 (1:2.25-1.2) ... Setting up libwayland-client0:amd64 (1.15.0-1) ... Setting up xkb-data (2.23.1-1) ... Setting up libproxy1v5:amd64 (0.4.15-1) ... Setting up wx3.0-headers (3.0.4+dfsg-3) ... Setting up libgdk-pixbuf2.0-common (2.36.11-2) ... Setting up libllvm5.0:amd64 (1:5.0.1-4) ... Setting up glib-networking-services (2.56.0-1) ... Setting up libdatrie1:amd64 (0.2.11-1) ... Setting up libtiff5:amd64 (4.0.9-5) ... Setting up gettext-base (0.19.8.1-6) ... Setting up libgraphblas2:amd64 (1:5.2.0+dfsg-1) ... Setting up libpipeline1:amd64 (1.5.0-1) ... Setting up libglapi-mesa:amd64 (17.3.9-1) ... Setting up m4 (1.4.18-1) ... Setting up libfftw3-double3:amd64 (3.3.7-1+b1) ... Setting up libicu57:amd64 (57.1-9) ... Setting up libprocps6:amd64 (2:3.3.14-1) ... Setting up ucf (3.0038) ... Setting up libkmod2:amd64 (25-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-6.1) ... Setting up x11proto-dev (2018.4-4) ... Setting up libfreetype6:amd64 (2.8.1-2) ... Setting up libmagic-mgc (1:5.33-2) ... Setting up libwxbase3.0-0v5:amd64 (3.0.4+dfsg-3) ... Setting up libmagic1:amd64 (1:5.33-2) ... Setting up libdrm-common (2.4.91-2) ... Setting up libjson-glib-1.0-0:amd64 (1.4.2-4) ... Setting up lsb-base (9.20170808) ... Setting up libgraphite2-3:amd64 (1.3.11-2) ... Setting up procps (2:3.3.14-1) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libcroco3:amd64 (0.6.12-2) ... Setting up libargon2-0:amd64 (0~20161029-2) ... Setting up libfftw3-quad3:amd64 (3.3.7-1+b1) ... Setting up libatk1.0-data (2.28.1-1) ... Setting up x11proto-damage-dev (1:2018.4-4) ... Setting up pkg-config (0.29-4+b1) ... Setting up libx11-xcb1:amd64 (2:1.6.5-1) ... Setting up libpixman-1-0:amd64 (0.34.0-2) ... Setting up xtrans-dev (1.3.5-1) ... Setting up libblas3:amd64 (3.8.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up x11proto-xext-dev (2018.4-4) ... Processing triggers for libc-bin (2.27-3) ... Setting up libepoxy0:amd64 (1.4.3-1) ... Setting up autotools-dev (20180224.1) ... Setting up libapparmor1:amd64 (2.12-4) ... Setting up libatk1.0-0:amd64 (2.28.1-1) ... Setting up libsuitesparseconfig5:amd64 (1:5.2.0+dfsg-1) ... Setting up libmetis5:amd64 (5.1.0.dfsg-5+b2) ... Setting up x11proto-gl-dev (2018.4-4) ... Setting up libsqlite3-0:amd64 (3.23.1-1) ... Setting up libcolamd2:amd64 (1:5.2.0+dfsg-1) ... Setting up libdconf1:amd64 (0.28.0-2) ... Setting up libfribidi0:amd64 (0.19.7-2) ... Setting up liblocale-gettext-perl (1.07-3+b3) ... Setting up libexpat1-dev:amd64 (2.2.5-3) ... Setting up libpciaccess0:amd64 (0.14-1) ... Setting up libccolamd2:amd64 (1:5.2.0+dfsg-1) ... Setting up libfftw3-single3:amd64 (3.3.7-1+b1) ... Setting up libsensors4:amd64 (1:3.4.0-4) ... Setting up libgles2:amd64 (1.0.0+git20180308-2) ... Setting up shared-mime-info (1.9-2) ... Setting up libxkbcommon0:amd64 (0.8.0-1) ... Setting up libboost-dev:amd64 (1.62.0.1) ... Setting up libcolord2:amd64 (1.3.3-2) ... Setting up libthai-data (0.1.27-2) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.5.2-2+b1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libkeyutils1:amd64 (1.5.9-9.2) ... Setting up bsdmainutils (11.1.2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libfftw3-long3:amd64 (3.3.7-1+b1) ... Setting up hicolor-icon-theme (0.17-2) ... Setting up libglvnd-core-dev:amd64 (1.0.0+git20180308-2) ... Setting up hdf5-helpers (1.10.0-patch1+docs-4+b1) ... Setting up libwayland-cursor0:amd64 (1.15.0-1) ... Setting up libnih1 (1.0.3-10+b1) ... Setting up libx11-data (2:1.6.5-1) ... Setting up libpython2.7-stdlib:amd64 (2.7.15-1) ... Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up autopoint (0.19.8.1-6) ... Setting up libidn11:amd64 (1.33-2.2) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libdbus-1-3:amd64 (1.12.8-1) ... Setting up libnih-dbus1 (1.0.3-10+b1) ... Setting up libavahi-common-data:amd64 (0.7-4) ... Setting up libsz2:amd64 (1.0.2-1) ... Setting up libwayland-server0:amd64 (1.15.0-1) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-1) ... Setting up libfile-stripnondeterminism-perl (0.041-1) ... Setting up libcgmanager0:amd64 (0.41-2) ... Setting up libbtf1:amd64 (1:5.2.0+dfsg-1) ... Setting up libldl2:amd64 (1:5.2.0+dfsg-1) ... Setting up x11proto-dri2-dev (2018.4-4) ... Setting up libpython3.6-stdlib:amd64 (3.6.5-5) ... Setting up wx-common (3.0.4+dfsg-3) ... Setting up libcxsparse3:amd64 (1:5.2.0+dfsg-1) ... Setting up libfftw3-bin (3.3.7-1+b1) ... Setting up swig (3.0.12-1) ... Setting up fontconfig-config (2.13.0-4) ... Setting up python3.6 (3.6.5-5) ... Setting up x11proto-core-dev (2018.4-4) ... Setting up libhdf5-100:amd64 (1.10.0-patch1+docs-4+b1) ... Setting up libxshmfence-dev:amd64 (1.3-1) ... Setting up gettext (0.19.8.1-6) ... Setting up libblas-dev:amd64 (3.8.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up liblapack3:amd64 (3.8.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up x11proto-fixes-dev (1:2018.4-4) ... Setting up librbio2:amd64 (1:5.2.0+dfsg-1) ... Setting up libcamd2:amd64 (1:5.2.0+dfsg-1) ... Setting up libaec-dev:amd64 (1.0.2-1) ... Setting up python2.7 (2.7.15-1) ... Setting up libharfbuzz0b:amd64 (1.7.6-1) ... Setting up x11proto-xf86vidmode-dev (2018.4-4) ... Setting up libxau-dev:amd64 (1:1.0.8-1+b2) ... Setting up autoconf (2.69-11) ... Setting up libthai0:amd64 (0.1.27-2) ... Setting up file (1:5.33-2) ... Setting up libkrb5support0:amd64 (1.16-2) ... Setting up libwxbase3.0-dev (3.0.4+dfsg-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/wx/config/base-unicode-3.0 to provide /usr/bin/wx-config (wx-config) in auto mode Setting up cgmanager (0.41-2) ... Created symlink /etc/systemd/system/multi-user.target.wants/cgmanager.service -> /lib/systemd/system/cgmanager.service. Created symlink /etc/systemd/system/multi-user.target.wants/cgproxy.service -> /lib/systemd/system/cgproxy.service. invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libdrm2:amd64 (2.4.91-2) ... Setting up libpython-stdlib:amd64 (2.7.15~rc1-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libamd2:amd64 (1:5.2.0+dfsg-1) ... Setting up libdrm-intel1:amd64 (2.4.91-2) ... Setting up libxdmcp-dev:amd64 (1:1.1.2-3) ... Setting up libjpeg-dev (1:1.5.2-2) ... Setting up libpython2.7:amd64 (2.7.15-1) ... Setting up libfftw3-dev:amd64 (3.3.7-1+b1) ... Setting up automake (1:1.15.1-3.1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up help2man (1.47.6) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up man-db (2.8.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2.7-dev:amd64 (2.7.15-1) ... Setting up libavahi-common3:amd64 (0.7-4) ... Setting up libdrm-radeon1:amd64 (2.4.91-2) ... Setting up dbus (1.12.8-1) ... invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libdrm-nouveau2:amd64 (2.4.91-2) ... Setting up python2.7-dev (2.7.15-1) ... Setting up libxcb1:amd64 (1.13-1) ... Setting up systemd-shim (10-3) ... Setting up python (2.7.15~rc1-1) ... Setting up liblapack-dev:amd64 (3.8.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libtool (2.4.6-2.1) ... Setting up libpython3-stdlib:amd64 (3.6.5-3) ... Setting up libxcb-present0:amd64 (1.13-1) ... Setting up libpython-dev:amd64 (2.7.15~rc1-1) ... Setting up libfontconfig1:amd64 (2.13.0-4) ... Setting up libxcb-dri2-0:amd64 (1.13-1) ... Setting up libsm6:amd64 (2:1.2.2-1+b3) ... Setting up libxcb-dri3-0:amd64 (1.13-1) ... Setting up libk5crypto3:amd64 (1.16-2) ... Setting up libxcb-glx0:amd64 (1.13-1) ... Setting up libxcb-randr0:amd64 (1.13-1) ... Setting up libhdf5-cpp-100:amd64 (1.10.0-patch1+docs-4+b1) ... Setting up libxcb-xfixes0:amd64 (1.13-1) ... Setting up libxcb-render0:amd64 (1.13-1) ... Setting up po-debconf (1.0.20) ... Setting up python3 (3.6.5-3) ... Setting up libdrm-amdgpu1:amd64 (2.4.91-2) ... Setting up python-dev (2.7.15~rc1-1) ... Setting up python-wxversion (3.0.2.0+dfsg-7) ... Setting up libdrm-dev:amd64 (2.4.91-2) ... Setting up libgbm1:amd64 (17.3.9-1) ... Setting up libx11-6:amd64 (2:1.6.5-1) ... Setting up libgl1-mesa-dri:amd64 (17.3.9-1) ... Setting up libpython-all-dev:amd64 (2.7.15~rc1-1) ... Setting up libklu1:amd64 (1:5.2.0+dfsg-1) ... Setting up libhdf5-dev (1.10.0-patch1+docs-4+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python-numpy (1:1.13.3-2) ... Setting up libcholmod3:amd64 (1:5.2.0+dfsg-1) ... Setting up libxcb-sync1:amd64 (1.13-1) ... Setting up libxcomposite1:amd64 (1:0.4.4-2) ... Setting up libxcb-shm0:amd64 (1.13-1) ... Setting up libxcb-shape0:amd64 (1.13-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libxcb1-dev:amd64 (1.13-1) ... Setting up libxcb-glx0-dev:amd64 (1.13-1) ... Setting up libavahi-client3:amd64 (0.7-4) ... Setting up libkrb5-3:amd64 (1.16-2) ... Setting up libegl-mesa0:amd64 (17.3.9-1) ... Setting up libx11-dev:amd64 (2:1.6.5-1) ... Setting up dh-python (3.20180326) ... Setting up python-all (2.7.15~rc1-1) ... Setting up libxcb-sync-dev:amd64 (1.13-1) ... Setting up fontconfig (2.13.0-4) ... Regenerating fonts cache... done. Setting up libspqr2:amd64 (1:5.2.0+dfsg-1) ... Setting up libx11-xcb-dev:amd64 (2:1.6.5-1) ... Setting up mesa-common-dev:amd64 (17.3.9-1) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libxfixes3:amd64 (1:5.0.3-1) ... Setting up libatspi2.0-0:amd64 (2.28.0-3) ... Setting up libgdk-pixbuf2.0-0:amd64 (2.36.11-2) ... Setting up libumfpack5:amd64 (1:5.2.0+dfsg-1) ... Setting up libgssapi-krb5-2:amd64 (1.16-2) ... Setting up libxcb-dri2-0-dev:amd64 (1.13-1) ... Setting up libxcb-render0-dev:amd64 (1.13-1) ... Setting up libegl1:amd64 (1.0.0+git20180308-2) ... Setting up gtk-update-icon-cache (3.22.30-1) ... Setting up libxcb-dri3-dev:amd64 (1.13-1) ... Setting up libxcursor1:amd64 (1:1.1.15-1) ... Setting up python-all-dev (2.7.15~rc1-1) ... Setting up libxext-dev:amd64 (2:1.3.3-1+b2) ... Setting up libpango-1.0-0:amd64 (1.42.1-1) ... Setting up libwayland-egl1-mesa:amd64 (17.3.9-1) ... Setting up libxcb-shape0-dev:amd64 (1.13-1) ... Setting up libatk-bridge2.0-0:amd64 (2.26.2-1) ... Setting up libsuitesparse-dev:amd64 (1:5.2.0+dfsg-1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libxxf86vm-dev:amd64 (1:1.1.4-1+b2) ... Setting up libxfixes-dev:amd64 (1:5.0.3-1) ... Setting up libxrandr2:amd64 (2:1.5.1-1) ... Setting up libcups2:amd64 (2.2.7-3) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libcairo2:amd64 (1.15.10-3) ... Setting up libnotify4:amd64 (0.7.7-3) ... Setting up libxinerama1:amd64 (2:1.1.3-1+b3) ... Setting up libxcb-randr0-dev:amd64 (1.13-1) ... Setting up libxdamage1:amd64 (1:1.1.4-3) ... Setting up libxcb-xfixes0-dev:amd64 (1.13-1) ... Setting up libcairo-gobject2:amd64 (1.15.10-3) ... Setting up libxdamage-dev:amd64 (1:1.1.4-3) ... Setting up libpangoft2-1.0-0:amd64 (1.42.1-1) ... Setting up libxcb-present-dev:amd64 (1.13-1) ... Setting up libglx-mesa0:amd64 (17.3.9-1) ... Setting up libpangocairo-1.0-0:amd64 (1.42.1-1) ... Setting up libglx0:amd64 (1.0.0+git20180308-2) ... Setting up librsvg2-2:amd64 (2.40.20-2) ... Setting up librsvg2-common:amd64 (2.40.20-2) ... Setting up libgl1:amd64 (1.0.0+git20180308-2) ... Setting up libglu1-mesa:amd64 (9.0.0-2.1) ... Setting up adwaita-icon-theme (3.28.0-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgtk2.0-0:amd64 (2.24.32-1) ... Setting up libwxgtk3.0-0v5:amd64 (3.0.4+dfsg-3) ... Setting up libglvnd-dev:amd64 (1.0.0+git20180308-2) ... Setting up libgl1-mesa-dev:amd64 (17.3.9-1) ... Setting up libglu1-mesa-dev:amd64 (9.0.0-2.1) ... Setting up libwxgtk3.0-dev (3.0.4+dfsg-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/wx/config/gtk2-unicode-3.0 to provide /usr/bin/wx-config (wx-config) in auto mode Setting up libdevmapper1.02.1:amd64 (2:1.02.145-4.1) ... Setting up dmsetup (2:1.02.145-4.1) ... Setting up dh-autoreconf (17) ... Setting up libcryptsetup12:amd64 (2:2.0.2-1) ... Setting up dh-strip-nondeterminism (0.041-1) ... Setting up systemd (238-4) ... Created symlink /etc/systemd/system/getty.target.wants/getty@tty1.service -> /lib/systemd/system/getty@.service. Created symlink /etc/systemd/system/multi-user.target.wants/remote-fs.target -> /lib/systemd/system/remote-fs.target. Created symlink /etc/systemd/system/sysinit.target.wants/systemd-timesyncd.service -> /lib/systemd/system/systemd-timesyncd.service. Initializing machine ID from D-Bus machine ID. Setting up debhelper (11.2.1) ... Setting up libpam-systemd:amd64 (238-4) ... Setting up dbus-user-session (1.12.8-1) ... Setting up dconf-service (0.28.0-2) ... Setting up dconf-gsettings-backend:amd64 (0.28.0-2) ... Setting up gsettings-desktop-schemas (3.28.0-1) ... Setting up libgtk-3-common (3.22.30-1) ... Setting up glib-networking:amd64 (2.56.0-1) ... Setting up libsoup2.4-1:amd64 (2.62.1-1) ... Setting up libsoup-gnome2.4-1:amd64 (2.62.1-1) ... Setting up librest-0.7-0:amd64 (0.8.0-2) ... Setting up libgtk-3-0:amd64 (3.22.30-1) ... Setting up libwxgtk3.0-gtk3-0v5:amd64 (3.0.4+dfsg-3) ... Setting up python-wxgtk3.0 (3.0.2.0+dfsg-7) ... update-alternatives: using /usr/lib/wx/python/wx3.0.pth to provide /usr/lib/wx/python/wx.pth (wx.pth) in auto mode Setting up python-wxgtk3.0-dev (3.0.2.0+dfsg-7) ... Setting up sbuild-build-depends-stimfit-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.27-3) ... Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.36.11-2) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-5-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.30-16 dpkg-dev_1.19.0.5 g++-7_7.3.0-17 gcc-7_7.3.0-17 libc6-dev_2.27-3 libstdc++-7-dev_7.3.0-17 libstdc++6_8-20180425-1 linux-libc-dev_4.15.17-1 Package versions: adduser_3.117 adwaita-icon-theme_3.28.0-1 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.45 bash_4.4.18-2 binutils_2.30-16 binutils-common_2.30-16 binutils-x86-64-linux-gnu_2.30-16 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.5 bzip2_1.0.6-8.1 cgmanager_0.41-2 chrpath_0.16-2+b1 clang-6.0_1:6.0-3 coreutils_8.28-1 cpp_4:7.3.0-3 cpp-7_7.3.0-17 dash_0.5.8-2.10 dbus_1.12.8-1 dbus-user-session_1.12.8-1 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libwayland-server0_1.15.0-1 libwxbase3.0-0v5_3.0.4+dfsg-3 libwxbase3.0-dev_3.0.4+dfsg-3 libwxgtk3.0-0v5_3.0.4+dfsg-3 libwxgtk3.0-dev_3.0.4+dfsg-3 libwxgtk3.0-gtk3-0v5_3.0.4+dfsg-3 libx11-6_2:1.6.5-1 libx11-data_2:1.6.5-1 libx11-dev_2:1.6.5-1 libx11-xcb-dev_2:1.6.5-1 libx11-xcb1_2:1.6.5-1 libxau-dev_1:1.0.8-1+b2 libxau6_1:1.0.8-1+b2 libxcb-dri2-0_1.13-1 libxcb-dri2-0-dev_1.13-1 libxcb-dri3-0_1.13-1 libxcb-dri3-dev_1.13-1 libxcb-glx0_1.13-1 libxcb-glx0-dev_1.13-1 libxcb-present-dev_1.13-1 libxcb-present0_1.13-1 libxcb-randr0_1.13-1 libxcb-randr0-dev_1.13-1 libxcb-render0_1.13-1 libxcb-render0-dev_1.13-1 libxcb-shape0_1.13-1 libxcb-shape0-dev_1.13-1 libxcb-shm0_1.13-1 libxcb-sync-dev_1.13-1 libxcb-sync1_1.13-1 libxcb-xfixes0_1.13-1 libxcb-xfixes0-dev_1.13-1 libxcb1_1.13-1 libxcb1-dev_1.13-1 libxcomposite1_1:0.4.4-2 libxcursor1_1:1.1.15-1 libxdamage-dev_1:1.1.4-3 libxdamage1_1:1.1.4-3 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxext-dev_2:1.3.3-1+b2 libxext6_2:1.3.3-1+b2 libxfixes-dev_1:5.0.3-1 libxfixes3_1:5.0.3-1 libxi6_2:1.7.9-1 libxinerama1_2:1.1.3-1+b3 libxkbcommon0_0.8.0-1 libxml2_2.9.4+dfsg1-6.1 libxrandr2_2:1.5.1-1 libxrender1_1:0.9.10-1 libxshmfence-dev_1.3-1 libxshmfence1_1.3-1 libxxf86vm-dev_1:1.1.4-1+b2 libxxf86vm1_1:1.1.4-1+b2 libzstd1_1.3.4+dfsg-1 linux-libc-dev_4.15.17-1 login_1:4.5-1 lsb-base_9.20170808 m4_1.4.18-1 make_4.2.1-1 man-db_2.8.3-2 mawk_1.3.3-17+b3 mesa-common-dev_17.3.9-1 mime-support_3.60 mount_2.31.1-0.5 multiarch-support_2.27-3 ncurses-base_6.1+20180210-2 ncurses-bin_6.1+20180210-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-3 perl-base_5.26.2-3 perl-modules-5.26_5.26.2-3 pkg-config_0.29-4+b1 po-debconf_1.0.20 procps_2:3.3.14-1 python_2.7.15~rc1-1 python-all_2.7.15~rc1-1 python-all-dev_2.7.15~rc1-1 python-dev_2.7.15~rc1-1 python-minimal_2.7.15~rc1-1 python-numpy_1:1.13.3-2 python-wxgtk3.0_3.0.2.0+dfsg-7 python-wxgtk3.0-dev_3.0.2.0+dfsg-7 python-wxversion_3.0.2.0+dfsg-7 python2.7_2.7.15-1 python2.7-dev_2.7.15-1 python2.7-minimal_2.7.15-1 python3_3.6.5-3 python3-minimal_3.6.5-3 python3.6_3.6.5-5 python3.6-minimal_3.6.5-5 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-stimfit-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 shared-mime-info_1.9-2 swig_3.0.12-1 swig3.0_3.0.12-1 systemd_238-4 systemd-shim_10-3 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-1 ucf_3.0038 util-linux_2.31.1-0.5 wx-common_3.0.4+dfsg-3 wx3.0-headers_3.0.4+dfsg-3 x11-common_1:7.7+19 x11proto-core-dev_2018.4-4 x11proto-damage-dev_1:2018.4-4 x11proto-dev_2018.4-4 x11proto-dri2-dev_2018.4-4 x11proto-fixes-dev_1:2018.4-4 x11proto-gl-dev_2018.4-4 x11proto-xext-dev_2018.4-4 x11proto-xf86vidmode-dev_2018.4-4 xkb-data_2.23.1-1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Apr 27 18:50:18 2018 UTC gpgv: using RSA key C5B905F0E8D9FD9668FF366FA2DE235062DA33FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./stimfit_0.15.6-1.dsc dpkg-source: info: extracting stimfit in /<> dpkg-source: info: unpacking stimfit_0.15.6.orig.tar.gz dpkg-source: info: unpacking stimfit_0.15.6-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-0291dc7c-6d99-4678-994c-82dd25295c99 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package stimfit dpkg-buildpackage: info: source version 0.15.6-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Christoph Schmidt-Hieber dpkg-source --before-build stimfit-0.15.6 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh_testdir dh_testroot rm -f build-stamp rm -rf ./.libs ./_libs ./.deps ./.stimfit rm -rf /<>/man find -name '*.o' | xargs -r rm -f find -name '*.lo' | xargs -r rm -f find -name '*.a' | xargs -r rm -f find -name '*.la' | xargs -r rm -f find -name '*.so' | xargs -r rm -f rm -f /<>/test.h5 dh_autoreconf_clean dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f debian/python-stfio.debhelper.log debian/stimfit-dbg.debhelper.log debian/stimfit.debhelper.log rm -f -- debian/stimfit.substvars debian/stimfit-dbg.substvars debian/python-stfio.substvars debian/files rm -fr -- debian/stimfit/ debian/tmp/ debian/stimfit-dbg/ debian/python-stfio/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh_testdir fakeroot debian/rules binary-arch dh_testdir dh_autoreconf find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before autoreconf -f -i libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:7: installing './compile' configure.ac:3: installing './missing' Makefile.am:218: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') Makefile.am:8: warning: source file './src/stimfit/gui/main.cpp' is in a subdirectory, Makefile.am:8: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least a source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, automake: this behaviour will change in future Automake versions: they will automake: unconditionally cause object files to be placed in the same subdirectory automake: of the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. Makefile.am:10: warning: source file './src/test/section.cpp' is in a subdirectory, Makefile.am:10: but option 'subdir-objects' is disabled Makefile.am:10: warning: source file './src/test/channel.cpp' is in a subdirectory, Makefile.am:10: but option 'subdir-objects' is disabled Makefile.am:10: warning: source file './src/test/recording.cpp' is in a subdirectory, Makefile.am:10: but option 'subdir-objects' is disabled Makefile.am:10: warning: source file './src/test/fit.cpp' is in a subdirectory, Makefile.am:10: but option 'subdir-objects' is disabled Makefile.am:10: warning: source file './src/test/measure.cpp' is in a subdirectory, Makefile.am:10: but option 'subdir-objects' is disabled Makefile.am:10: warning: source file './src/test/gtest/src/gtest-all.cc' is in a subdirectory, Makefile.am:10: but option 'subdir-objects' is disabled Makefile.am:10: warning: source file './src/test/gtest/src/gtest_main.cc' is in a subdirectory, Makefile.am:10: but option 'subdir-objects' is disabled Makefile.am: installing './depcomp' src/libbiosiglite/Makefile.am:9: warning: pkglibdir was already defined in condition TRUE, which includes condition BUILD_MODULE ... /usr/share/automake-1.15/am/header-vars.am: ... 'pkglibdir' previously defined here src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t210/sopen_abf_read.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t210/sopen_alpha_read.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t210/sopen_axg_read.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t210/sopen_cfs_read.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t210/sopen_heka_read.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t210/sopen_igor.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t210/sopen_scp_read.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t210/scp-decode.cpp' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t220/crc4scp.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/t220/sopen_scp_write.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/test0/sandbox.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/biosig.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/biosig2.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/biosig-network.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/biosig-HL7aECG-stub.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/gdftime.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/mdc_ecg_codes.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libbiosiglite/Makefile.am:15: warning: source file 'biosig4c++/physicalunits.c' is in a subdirectory, src/libbiosiglite/Makefile.am:15: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:9: warning: pkglibdir was already defined in condition TRUE, which includes condition BUILD_MODULE ... /usr/share/automake-1.15/am/header-vars.am: ... 'pkglibdir' previously defined here src/libstfio/Makefile.am:14: warning: source file './channel.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './section.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './recording.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './stfio.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './cfs/cfslib.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './cfs/cfs.c' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './hdf5/hdf5lib.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/abflib.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAbfFio32/abffiles.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAbfFio32/csynch.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAbfFio32/filedesc.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/Common/FileReadCache.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/Common/FileIO.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAbfFio32/abfheadr.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAbfFio32/abfhwave.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAbfFio32/Oldheadr.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAbfFio32/abfutil.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAbfFio32/msbincvt.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/Common/unix.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAbfFio32/abferror.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAtfFio32/axatffio32.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon/AxAtfFio32/fileio2.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon2/ProtocolReaderABF2.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon2/SimpleStringCache.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './abf/axon2/abf2headr.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './atf/atflib.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './axg/axglib.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './axg/AxoGraph_ReadWrite.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './axg/fileUtils.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './axg/stringUtils.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './axg/byteswap.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './heka/hekalib.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './igor/igorlib.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './igor/CrossPlatformFileIO.c' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './igor/WriteWave.c' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './intan/common.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './intan/intanlib.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:14: warning: source file './intan/streams.cpp' is in a subdirectory, src/libstfio/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:50: warning: source file './biosig/biosiglib.cpp' is in a subdirectory, src/libstfio/Makefile.am:50: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:53: warning: source file './biosig/biosiglib.cpp' is in a subdirectory, src/libstfio/Makefile.am:53: but option 'subdir-objects' is disabled src/libstfio/Makefile.am:56: warning: source file './biosig/biosiglib.cpp' is in a subdirectory, src/libstfio/Makefile.am:56: but option 'subdir-objects' is disabled src/libstfnum/Makefile.am:9: warning: pkglibdir was already defined in condition TRUE, which includes condition BUILD_MODULE ... /usr/share/automake-1.15/am/header-vars.am: ... 'pkglibdir' previously defined here src/libstfnum/Makefile.am:14: warning: source file './fit.cpp' is in a subdirectory, src/libstfnum/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfnum/Makefile.am:14: warning: source file './levmar/lm.c' is in a subdirectory, src/libstfnum/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfnum/Makefile.am:14: warning: source file './levmar/Axb.c' is in a subdirectory, src/libstfnum/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfnum/Makefile.am:14: warning: source file './levmar/misc.c' is in a subdirectory, src/libstfnum/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfnum/Makefile.am:14: warning: source file './levmar/lmlec.c' is in a subdirectory, src/libstfnum/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfnum/Makefile.am:14: warning: source file './levmar/lmbc.c' is in a subdirectory, src/libstfnum/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfnum/Makefile.am:14: warning: source file './funclib.cpp' is in a subdirectory, src/libstfnum/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfnum/Makefile.am:14: warning: source file './stfnum.cpp' is in a subdirectory, src/libstfnum/Makefile.am:14: but option 'subdir-objects' is disabled src/libstfnum/Makefile.am:14: warning: source file './measure.cpp' is in a subdirectory, src/libstfnum/Makefile.am:14: but option 'subdir-objects' is disabled src/pystfio/Makefile.am:33: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/pystfio/Makefile.am:29: warning: source file '$(top_srcdir)/src/pystfio/pystfio.cxx' is in a subdirectory, src/pystfio/Makefile.am:29: but option 'subdir-objects' is disabled src/pystfio/Makefile.am:27: warning: source file '$(top_srcdir)/src/pystfio/pystfio_wrap.cxx' is in a subdirectory, src/pystfio/Makefile.am:27: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:25: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/stimfit/Makefile.am:3: warning: source file './stf.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/app.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/unopt.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/doc.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/copygrid.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/graph.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/printout.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/parentframe.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/childframe.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/view.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/table.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/zoom.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/dlgs/convertdlg.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/dlgs/cursorsdlg.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/dlgs/eventdlg.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/dlgs/fitseldlg.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/dlgs/smalldlgs.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/Makefile.am:3: warning: source file './gui/usrdlg/usrdlg.cpp' is in a subdirectory, src/stimfit/Makefile.am:3: but option 'subdir-objects' is disabled src/stimfit/py/Makefile.am:15: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/stimfit/py/Makefile.am:12: warning: source file '$(srcdir)/pystf.cxx' is in a subdirectory, src/stimfit/py/Makefile.am:12: but option 'subdir-objects' is disabled src/stimfit/py/Makefile.am:10: warning: source file '$(srcdir)/pystf_wrap.cxx' is in a subdirectory, src/stimfit/py/Makefile.am:10: but option 'subdir-objects' is disabled find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after ./configure --enable-python --enable-debian --with-biosiglite --prefix=/<>/debian/tmp/usr checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... no checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C preprocessor... gcc -E checking for gawk... (cached) mawk checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for kernel... linux or similar checking for python... /usr/bin/python checking for a version of Python >= '2.1.0'... yes checking for the distutils Python package... yes checking for Python include path... -I/usr/include/python2.7 checking for Python library path... -L/usr/lib -lpython2.7 checking for prefixed Python site-packages path... /<>/debian/tmp/usr/lib/python2.7/dist-packages checking for prefixed Python dist-packages path... /<>/debian/tmp/usr/lib/python2.7/site-packages checking for unprefixed Python dist-packages path... /usr/lib/python2.7/dist-packages checking for numpy... yes checking for numpy include path... -I/usr/lib/python2.7/dist-packages/numpy/core/include checking python extra libraries... -L/usr/lib -lz -lpthread -ldl -lutil checking python extra linking flags... -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions checking consistency of all components of python development environment... yes checking for swig... /usr/bin/swig checking for SWIG version... 3.0.12 checking for kernel... checking for fftw_malloc in -lfftw3... yes checking for dgemm_ in -llapack... no checking for dgemm_ in -llapack3... no checking for dgemm_ in -llapack-3... no checking for dgemm_ in -lblas... yes checking wxWidgets version... 3.0.4 checking for wxWidgets libraries... -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk2u_core-3.0 -lwx_gtk2u_adv-3.0 -lwx_gtk2u_aui-3.0 -lwx_baseu_net-3.0 checking for wxWidgets platform... other checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for HDF5... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5Fopen in -lhdf5... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/libstfio/Makefile config.status: creating src/libstfnum/Makefile config.status: creating src/libbiosiglite/Makefile config.status: creating src/pystfio/Makefile config.status: creating src/stimfit/Makefile config.status: creating src/stimfit/py/Makefile config.status: creating dist/macosx/stimfit.plist config.status: creating stfconf.h config.status: executing depfiles commands config.status: executing libtool commands /usr/bin/make make[1]: Entering directory '/<>' /usr/bin/make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' Making all in libbiosiglite make[4]: Entering directory '/<>/src/libbiosiglite' CC libbiosiglite_la-sopen_abf_read.lo CC libbiosiglite_la-sopen_alpha_read.lo CC libbiosiglite_la-sopen_axg_read.lo CC libbiosiglite_la-sopen_cfs_read.lo CC libbiosiglite_la-sopen_heka_read.lo CC libbiosiglite_la-sopen_igor.lo CC libbiosiglite_la-sopen_scp_read.lo CXX libbiosiglite_la-scp-decode.lo biosig4c++/t210/sopen_alpha_read.c:380:6: warning: implicit declaration of function 'FreeTextEvent' is invalid in C99 [-Wimplicit-function-declaration] FreeTextEvent(hdr, n, t4); ^ biosig4c++/t210/sopen_abf_read.c:544:4: warning: implicit declaration of function 'FreeTextEvent' is invalid in C99 [-Wimplicit-function-declaration] FreeTextEvent(hdr, k+n1, (char*)(abftag+4)); ^ biosig4c++/t210/sopen_axg_read.c:612:3: warning: implicit declaration of function 'strptime' is invalid in C99 [-Wimplicit-function-declaration] strptime(strstr(Notes,"Created on ")+11, "%a %b %d %Y", &T); ^biosig4c++/t210/sopen_alpha_read.c:532:17: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] hdr->FileName = FileName; ^ ~~~~~~~~ biosig4c++/t210/sopen_cfs_read.c :81:9: warning: returning 'uint8_t *' (aka 'unsigned char *') from a function with result type 'char *' converts between pointers to integer types with different sign [-Wpointer-sign] return (pstr+1); ^~~~~~~~ biosig4c++/t210/sopen_cfs_read.c:185:56: warning: passing 'char *' to parameter of type 'uint8_t *' (aka 'unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign] strncpy(hc->Label, trim_trailing_space(H2 + k*H2LEN, 20), 21); // Channel name ^~~~~~~~~~~~ biosig4c++/t210/sopen_cfs_read.c:69:36: note: passing argument to parameter 'pstr' here char *trim_trailing_space(uint8_t *pstr, unsigned maxLength) { ^ biosig4c++/t210/sopen_cfs_read.c:186:56: warning: passing 'char *' to parameter of type 'uint8_t *' (aka 'unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign] hc->PhysDimCode = PhysDimCode (trim_trailing_space(H2 + 22 + k*H2LEN,9)); // Y axis units ^~~~~~~~~~~~~~~~~ biosig4c++/t210/sopen_cfs_read.c:69:36: note: passing argument to parameter 'pstr' here char *trim_trailing_space(uint8_t *pstr, unsigned maxLength) { ^ biosig4c++/t210/sopen_cfs_read.c:187:68: warning: passing 'char *' to parameter of type 'uint8_t *' (aka 'unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign] xPhysDimScale[k] = PhysDimScale(PhysDimCode(trim_trailing_space(H2 + 32 + k*H2LEN,9))); // X axis units ^~~~~~~~~~~~~~~~~ biosig4c++/t210/sopen_cfs_read.c:69:36: note: passing argument to parameter 'pstr' here char *trim_trailing_space(uint8_t *pstr, unsigned maxLength) { ^ biosig4c++/t210/sopen_cfs_read.c:661:8: warning: implicit declaration of function 'FreeTextEvent' is invalid in C99 [-Wimplicit-function-declaration] FreeTextEvent(hdr, hdr->EVENT.N, Desc); ^ biosig4c++/t210/sopen_cfs_read.c:732:8: warning: implicit declaration of function 'FreeTextEvent' is invalid in C99 [-Wimplicit-function-declaration] FreeTextEvent(hdr, hdr->EVENT.N, Desc); ^ biosig4c++/t210/scp-decode.cpp:278:3: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:279:3: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:424:3: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:425:3: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:478:3: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:479:3: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1210:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1211:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1243:5: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1244:5: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1291:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1292:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1302:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1303:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1642:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1643:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1653:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1654:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1694:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1695:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1758:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1759:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1769:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1770:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1822:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1823:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1837:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_UNSPECIFIC_ERROR; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1838:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Cannot read data"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1843:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1844:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1866:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1867:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1874:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1875:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1913:3: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1914:3: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1947:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1948:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:1963:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:1964:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:2001:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:2002:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:2018:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:2019:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:2031:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:2032:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:2070:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:2071:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:2086:4: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; ^ biosig4c++/t210/scp-decode.cpp:117:17: note: 'B4C_ERRNUM' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern int B4C_ERRNUM; ^ biosig4c++/t210/scp-decode.cpp:2087:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "SCP-DECODE: Not enough memory"; ^ biosig4c++/t210/scp-decode.cpp:118:17: note: 'B4C_ERRMSG' has been explicitly marked deprecated here __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; ^ biosig4c++/t210/scp-decode.cpp:2449:15: warning: expression result unused [-Wunused-value] mask<<2; ~~~~^ ~ biosig4c++/t210/scp-decode.cpp:276:5: warning: variable 'num' is used uninitialized whenever '&&' condition is false [-Wsometimes-uninitialized] if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~ biosig4c++/t210/scp-decode.cpp:378:2: note: in instantiation of function template specialization 'ReadByte' requested here ReadByte(_DIM_FILE); ^ biosig4c++/t210/scp-decode.cpp:282:9: note: uninitialized use occurs here ifread(num,dim,1,in); ^~~ biosig4c++/t210/scp-decode.cpp:276:5: note: remove the '&&' if its condition is always true if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~~~~ biosig4c++/t210/scp-decode.cpp:272:14: note: initialize the variable 'num' to silence this warning uint8_t *num, dim=sizeof(t1); ^ = nullptr biosig4c++/t210/scp-decode.cpp:276:5: warning: variable 'num' is used uninitialized whenever '&&' condition is false [-Wsometimes-uninitialized] if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~ biosig4c++/t210/scp-decode.cpp:586:2: note: in instantiation of function template specialization 'ReadByte' requested here ReadByte(dim); ^ biosig4c++/t210/scp-decode.cpp:282:9: note: uninitialized use occurs here ifread(num,dim,1,in); ^~~ biosig4c++/t210/scp-decode.cpp:276:5: note: remove the '&&' if its condition is always true if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~~~~ biosig4c++/t210/scp-decode.cpp:272:14: note: initialize the variable 'num' to silence this warning uint8_t *num, dim=sizeof(t1); ^ = nullptr biosig4c++/t210/scp-decode.cpp:289:9: warning: shift count >= width of type [-Wshift-count-overflow] number<<=8; ^ ~ biosig4c++/t210/scp-decode.cpp:675:2: note: in instantiation of function template specialization 'ReadByte' requested here ReadByte(version); // by E.C. may 2004 store the version number ^ biosig4c++/t210/scp-decode.cpp:276:5: warning: variable 'num' is used uninitialized whenever '&&' condition is false [-Wsometimes-uninitialized] if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~ biosig4c++/t210/scp-decode.cpp:282:9: note: uninitialized use occurs here ifread(num,dim,1,in); ^~~ biosig4c++/t210/scp-decode.cpp:276:5: note: remove the '&&' if its condition is always true if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~~~~ biosig4c++/t210/scp-decode.cpp:272:14: note: initialize the variable 'num' to silence this warning uint8_t *num, dim=sizeof(t1); ^ = nullptr biosig4c++/t210/scp-decode.cpp:289:9: warning: shift count >= width of type [-Wshift-count-overflow] number<<=8; ^ ~ biosig4c++/t210/scp-decode.cpp:760:9: note: in instantiation of function template specialization 'ReadByte' requested here ReadByte(bimodal); ^ biosig4c++/t210/scp-decode.cpp:276:5: warning: variable 'num' is used uninitialized whenever '&&' condition is false [-Wsometimes-uninitialized] if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~ biosig4c++/t210/scp-decode.cpp:282:9: note: uninitialized use occurs here ifread(num,dim,1,in); ^~~ biosig4c++/t210/scp-decode.cpp:276:5: note: remove the '&&' if its condition is always true if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~~~~ biosig4c++/t210/scp-decode.cpp:272:14: note: initialize the variable 'num' to silence this warning uint8_t *num, dim=sizeof(t1); ^ = nullptr biosig4c++/t210/scp-decode.cpp:276:5: warning: variable 'num' is used uninitialized whenever '&&' condition is false [-Wsometimes-uninitialized] if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~ biosig4c++/t210/scp-decode.cpp:1737:2: note: in instantiation of function template specialization 'ReadByte' requested here ReadByte(dev.TZ.offset); //complemented if negative ^ biosig4c++/t210/scp-decode.cpp:282:9: note: uninitialized use occurs here ifread(num,dim,1,in); ^~~ biosig4c++/t210/scp-decode.cpp:276:5: note: remove the '&&' if its condition is always true if(dim!=0 && (num=(uint8_t*)mymalloc(dim))==NULL) ^~~~~~~~~ biosig4c++/t210/scp-decode.cpp:272:14: note: initialize the variable 'num' to silence this warning uint8_t *num, dim=sizeof(t1); ^ = nullptr 2 warnings generated. 1 warning generated. 1 warning generated. 6 warnings generated. CC libbiosiglite_la-crc4scp.lo CC libbiosiglite_la-sopen_scp_write.lo CC libbiosiglite_la-sandbox.lo CC libbiosiglite_la-biosig.lo CC libbiosiglite_la-biosig2.lo biosig4c++/biosig.c:361:3: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] B4C_ERRNUM = B4C_UNSPECIFIC_ERROR; ^ biosig4c++/biosig.c:95:1: note: 'B4C_ERRNUM' has been explicitly marked deprecated here ATT_DEPREC int B4C_ERRNUM = 0; ^ biosig4c++/biosig-dev.h:156:38: note: expanded from macro 'ATT_DEPREC' #define ATT_DEPREC __attribute__ ((deprecated)) ^ biosig4c++/biosig.c:362:3: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] B4C_ERRMSG = "Computing LCM failed."; ^ biosig4c++/biosig.c:96:1: note: 'B4C_ERRMSG' has been explicitly marked deprecated here ATT_DEPREC const char *B4C_ERRMSG; ^ biosig4c++/biosig-dev.h:156:38: note: expanded from macro 'ATT_DEPREC' #define ATT_DEPREC __attribute__ ((deprecated)) ^ biosig4c++/biosig.c:1564:10: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] if ((U32==83)) { ~~~^~~~ biosig4c++/biosig.c:1564:10: note: remove extraneous parentheses around the comparison to silence this warning if ((U32==83)) { ~ ^ ~ biosig4c++/biosig.c:1564:10: note: use '=' to turn this equality comparison into an assignment if ((U32==83)) { ^~ = biosig4c++/biosig2.c:420:1: warning: control may reach end of non-void function [-Wreturn-type] } ^ biosig4c++/biosig.c:2403:29: warning: comparison of array 'hdr->Patient.Id' equal to a null pointer is always false [-Wtautological-pointer-compare] size_t l1 = (hdr->Patient.Id==NULL) ? 0 : strlen(hdr->Patient.Id); ~~~~~~~~~~~~~^~ ~~~~ biosig4c++/biosig.c:2404:29: warning: comparison of array 'hdr->Patient.Name' equal to a null pointer is always false [-Wtautological-pointer-compare] size_t l2 = (hdr->Patient.Name==NULL) ? 0 : strlen(hdr->Patient.Name); ~~~~~~~~~~~~~^~~~ ~~~~ CC libbiosiglite_la-biosig-network.lo CC libbiosiglite_la-biosig-HL7aECG-stub.lo biosig4c++/biosig.c:7530:5: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread(buf,sz,1,fid); ^~~~~ ~~~~~~~~~~~~ biosig4c++/biosig.c:9629:23: warning: passing 'uint8_t *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign] strncpy(hc->Label, hdr->AS.Header + H1LEN + k*H2LEN + 8, min(64,MAX_LENGTH_LABEL)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/bits/string_fortified.h:103:65: note: passing argument to parameter '__src' here __NTH (strncpy (char *__restrict __dest, const char *__restrict __src, ^ biosig4c++/biosig.c:9635:35: warning: passing 'uint8_t *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign] hc->PhysDimCode = PhysDimCode(hdr->AS.Header + H1LEN + k*H2LEN + 5*8 + 64); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ biosig4c++/physicalunits.h:42:34: note: passing argument to parameter 'PhysDim' here uint16_t PhysDimCode(const char* PhysDim); ^ biosig4c++/biosig.c:11040:23: warning: passing 'uint8_t *' (aka 'unsigned char *') to parameter of type 'char *' converts between pointers to integer types with different sign [-Wpointer-sign] char *tok = strtok(hdr->AS.Header,"\r\n"); ^~~~~~~~~~~~~~ /usr/include/string.h:335:39: note: passing argument to parameter '__s' here extern char *strtok (char *__restrict __s, const char *__restrict __delim) ^ biosig4c++/biosig.c:11051:5: warning: implicit declaration of function 'strptime' is invalid in C99 [-Wimplicit-function-declaration] strptime(val,"%d/%m/%Y %T",&T); ^ biosig4c++/biosig.c:11225:21: warning: comparison of array 'hdr->Patient.Id' equal to a null pointer is always false [-Wtautological-pointer-compare] if ( (hdr->Patient.Id==NULL) || !strlen(hdr->Patient.Id)) ~~~~~~~~~~~~~^~ ~~~~ biosig4c++/biosig.c:12003:29: warning: use of logical '&&' with constant operand [-Wconstant-logical-operand] Header1[curPos++] = (ch && 0x7f); ^ ~~~~ biosig4c++/biosig.c:12003:29: note: use '&' for a bitwise operation Header1[curPos++] = (ch && 0x7f); ^~ & biosig4c++/biosig.c:12003:29: note: remove constant to silence this warning Header1[curPos++] = (ch && 0x7f); ~^~~~~~~ biosig4c++/biosig.c:11680:17: warning: implicit conversion from 'int' to 'char' changes value from 255 to -1 [-Wconstant-conversion] Header1[0] = 255; ~ ^~~ biosig4c++/biosig-network.c:259:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ biosig4c++/biosig-network.c:268:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ biosig4c++/biosig-network.c:312:1: warning: control may reach end of non-void function [-Wreturn-type] } ^ CC libbiosiglite_la-gdftime.lo biosig4c++/biosig-network.c:807:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ CC libbiosiglite_la-mdc_ecg_codes.lo biosig4c++/biosig.c:13822:19: warning: address of array 'hdr->Patient.Id' will always evaluate to 'true' [-Wpointer-bool-conversion] if (hdr->Patient.Id) c += sprintf(STR, "\t\t\"Id\"\t: \"%s\",\n", hdr->Patient.Id); ~~ ~~~~~~~~~~~~~^~ biosig4c++/biosig.c:13871:12: warning: address of array 'hc->Transducer' will always evaluate to 'true' [-Wpointer-bool-conversion] if ( hc->Transducer && strlen(hc->Transducer) ) c += sprintf(STR,"\t\t\"Transducer\"\t: \"%s\",\n", hc->Transducer); ~~~~^~~~~~~~~~ ~~ 4 warnings generated. biosig4c++/biosig.c:14021:19: warning: address of array 'hdr->Patient.Id' will always evaluate to 'true' [-Wpointer-bool-conversion] if (hdr->Patient.Id) fprintf(fid,"\t\t\"Id\"\t: \"%s\",\n", hdr->Patient.Id); ~~ ~~~~~~~~~~~~~^~ biosig4c++/biosig.c:14059:12: warning: address of array 'hc->Transducer' will always evaluate to 'true' [-Wpointer-bool-conversion] if ( hc->Transducer && strlen(hc->Transducer) ) fprintf(fid,"\t\t\"Transducer\"\t: \"%s\",\n", hc->Transducer); ~~~~^~~~~~~~~~ ~~ CC libbiosiglite_la-physicalunits.lo 1 warning generated. 58 warnings generated. 17 warnings generated. CXXLD libbiosiglite.la ar: `u' modifier ignored since `D' is the default (see `U') make[4]: Leaving directory '/<>/src/libbiosiglite' Making all in libstfio make[4]: Entering directory '/<>/src/libstfio' CXX channel.lo CXX section.lo CXX recording.lo CXX stfio.lo CXX cfslib.lo CC cfs.lo CXX hdf5lib.lo CXX abflib.lo ./recording.cpp:91:5: warning: 'date' is deprecated [-Wdeprecated-declarations] date.resize(128); ^ ././recording.h:391:21: note: 'date' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ./recording.cpp:93:21: warning: 'date' is deprecated [-Wdeprecated-declarations] snprintf((char*)date.c_str(), 128, "%04i-%02i-%02i", t.tm_year+1900, t.tm_mon+1, t.tm_mday); ^ ././recording.h:391:21: note: 'date' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ./recording.cpp:94:12: warning: 'date' is deprecated [-Wdeprecated-declarations] return date; ^ ././recording.h:391:21: note: 'date' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ./recording.cpp:99:5: warning: 'time0' is deprecated [-Wdeprecated-declarations] time0.resize(128); ^ ././recording.h:391:21: note: 'time0' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ./recording.cpp:101:21: warning: 'time0' is deprecated [-Wdeprecated-declarations] snprintf((char*)time0.c_str(), 128, "%02i:%02i:%02i", t.tm_hour,t.tm_min,t.tm_sec); ^ ././recording.h:391:21: note: 'time0' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ./recording.cpp:102:12: warning: 'time0' is deprecated [-Wdeprecated-declarations] return time0; ^ ././recording.h:391:21: note: 'time0' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ./stfio.cpp:219:17: warning: unused variable 'res' [-Wunused-variable] int res = stfio::importCFSFile(fName, ReturnData, progDlg); ^ In file included from ./stfio.cpp:29: In file included from ././heka/./../stfio.h:66: ././recording.h:41:16: warning: 'time0' is deprecated [-Wdeprecated-declarations] class StfioDll Recording { ^ ./stfio.cpp:413:12: note: in implicit copy constructor for 'Recording' first required here return Concatenated; ^ ././recording.h:391:21: note: 'time0' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ././recording.h:41:16: warning: 'date' is deprecated [-Wdeprecated-declarations] class StfioDll Recording { ^ ././recording.h:391:21: note: 'date' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ./cfs/cfslib.cpp:548:29: warning: adding 'char' to a string pointer does not append to the string [-Wstring-plus-char] ReturnData.SetTime(time + '\0'); ~~~~~^~~~~~ ./cfs/cfslib.cpp:548:29: note: use array indexing to silence this warning ReturnData.SetTime(time + '\0'); ^ & [ ] ./cfs/cfslib.cpp:549:29: warning: adding 'char' to a string pointer does not append to the string [-Wstring-plus-char] ReturnData.SetDate(date + '\0'); ~~~~~^~~~~~ ./cfs/cfslib.cpp:549:29: note: use array indexing to silence this warning ReturnData.SetDate(date + '\0'); ^ & [ ] ./cfs/cfslib.cpp:550:35: warning: adding 'char' to a string pointer does not append to the string [-Wstring-plus-char] ReturnData.SetComment(comment + '\0'); ~~~~~~~~^~~~~~ ./cfs/cfslib.cpp:550:35: note: use array indexing to silence this warning ReturnData.SetComment(comment + '\0'); ^ & [ ] 3 warnings generated. 3 warnings generated. CXX abffiles.lo CXX csynch.lo 6 warnings generated. CXX filedesc.lo CXX FileReadCache.lo CXX FileIO.lo CXX abfheadr.lo ./abf/axon/AxAbfFio32/abfheadr.cpp:796:24: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign] int pFH = 0; pFH = pFH; ~~~ ^ ~~~ CXX abfhwave.lo 1 warning generated. CXX Oldheadr.lo CXX abfutil.lo CXX msbincvt.lo CXX unix.lo CXX abferror.lo CXX axatffio32.lo CXX fileio2.lo CXX ProtocolReaderABF2.lo CXX SimpleStringCache.lo CXX abf2headr.lo CXX atflib.lo CXX axglib.lo CXX AxoGraph_ReadWrite.lo CXX fileUtils.lo CXX stringUtils.lo In file included from ./axg/AxoGraph_ReadWrite.cpp:18: ./axg/AxoGraph_ReadWrite.h:200:13: warning: '__LITTLE_ENDIAN__' macro redefined [-Wmacro-redefined] #define __LITTLE_ENDIAN__ ^ :67:9: note: previous definition is here #define __LITTLE_ENDIAN__ 1 ^ In file included from ./axg/axglib.cpp:22: ./axg/../axg/AxoGraph_ReadWrite.h:200:13: warning: '__LITTLE_ENDIAN__' macro redefined [-Wmacro-redefined] #define __LITTLE_ENDIAN__ ^ :67:9: note: previous definition is here #define __LITTLE_ENDIAN__ 1 ^ CXX byteswap.lo CXX hekalib.lo CXX igorlib.lo CC CrossPlatformFileIO.lo 1 warning generated. 1 warning generated. CC WriteWave.lo CXX common.lo ./heka/hekalib.cpp:411:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register int i = 0; ^~~~~~~~~ ./heka/hekalib.cpp:412:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register int j = n-1; ^~~~~~~~~ CXX intanlib.lo CXX streams.lo CXX biosiglib.lo 2 warnings generated. ./biosig/biosiglib.cpp:277:109: warning: expansion of date or time macro is not reproducible [-Wdate-time] sprintf(str,"v%i.%i.%i (compiled on %s %s)",BIOSIG_VERSION_MAJOR,BIOSIG_VERSION_MINOR,BIOSIG_PATCHLEVEL,__DATE__,__TIME__); ^ ./biosig/biosiglib.cpp:277:118: warning: expansion of date or time macro is not reproducible [-Wdate-time] sprintf(str,"v%i.%i.%i (compiled on %s %s)",BIOSIG_VERSION_MAJOR,BIOSIG_VERSION_MINOR,BIOSIG_PATCHLEVEL,__DATE__,__TIME__); ^ 2 warnings generated. CXXLD libstfio.la ar: `u' modifier ignored since `D' is the default (see `U') make[4]: Leaving directory '/<>/src/libstfio' Making all in libstfnum make[4]: Entering directory '/<>/src/libstfnum' CXX fit.lo CC lm.lo CC Axb.lo CC misc.lo CC lmlec.lo CC lmbc.lo CXX funclib.lo CXX stfnum.lo CXX measure.lo CXXLD libstfnum.la ar: `u' modifier ignored since `D' is the default (see `U') make[4]: Leaving directory '/<>/src/libstfnum' Making all in stimfit make[4]: Entering directory '/<>/src/stimfit' CXX libstimfit_la-stf.lo CXX libstimfit_la-app.lo CXX libstimfit_la-unopt.lo CXX libstimfit_la-doc.lo CXX libstimfit_la-copygrid.lo CXX libstimfit_la-graph.lo CXX libstimfit_la-printout.lo CXX libstimfit_la-parentframe.lo In file included from ./gui/unopt.cpp:17: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/unopt.cpp:17: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./gui/unopt.cpp:45: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from ./gui/app.cpp:51: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/app.cpp:51: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./gui/doc.cpp:35: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/doc.cpp:35: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./gui/printout.cpp:27: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/printout.cpp:27: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./gui/graph.cpp:31: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/graph.cpp:31: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./gui/copygrid.cpp:29: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/copygrid.cpp:29: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./gui/parentframe.cpp:55: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/parentframe.cpp:55: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./gui/doc.cpp:49: In file included from ./gui/./../../pystfio/pystfio.h:7: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from ./gui/doc.cpp:35: In file included from ./gui/./app.h:178: In file included from ./gui/./usrdlg/./../../stf.h:77: In file included from ./gui/./../../pystfio/../libstfio/stfio.h:66: ./../libstfio/./recording.h:41:16: warning: 'time0' is deprecated [-Wdeprecated-declarations] class StfioDll Recording { ^ ./gui/doc.cpp:740:19: note: in implicit copy constructor for 'Recording' first required here Recording writeRec(ReorderChannels()); ^ ./../libstfio/./recording.h:391:21: note: 'time0' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ./../libstfio/./recording.h:41:16: warning: 'date' is deprecated [-Wdeprecated-declarations] class StfioDll Recording { ^ ./../libstfio/./recording.h:391:21: note: 'date' has been explicitly marked deprecated here __attribute__ ((deprecated)) ^ ./gui/app.cpp:1437:22: warning: expansion of date or time macro is not reproducible [-Wdate-time] verString << wxT(__DATE__) << wxT(", ") << wxT(__TIME__); ^ ./gui/app.cpp:1437:52: warning: expansion of date or time macro is not reproducible [-Wdate-time] verString << wxT(__DATE__) << wxT(", ") << wxT(__TIME__); ^ In file included from ./gui/unopt.cpp:45: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:27: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1453:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ In file included from ./gui/doc.cpp:49: In file included from ./gui/./../../pystfio/pystfio.h:7: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:27: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1453:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ 7 warnings generated. 7 warnings generated. 9 warnings generated. 7 warnings generated. CXX libstimfit_la-childframe.lo 9 warnings generated. 7 warnings generated. CXX libstimfit_la-view.lo CXX libstimfit_la-table.lo CXX libstimfit_la-zoom.lo CXX libstimfit_la-convertdlg.lo In file included from ./gui/childframe.cpp:51: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/childframe.cpp:51: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./gui/view.cpp:37: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/view.cpp:37: In file included from ./gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ CXX libstimfit_la-cursorsdlg.lo In file included from ./gui/dlgs/convertdlg.cpp:12: In file included from ./gui/dlgs/./../app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/dlgs/convertdlg.cpp:12: In file included from ./gui/dlgs/./../app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ 11 warnings generated. 7 warnings generated. 7 warnings generated. 7 warnings generated. CXX libstimfit_la-eventdlg.lo In file included from ./gui/dlgs/cursorsdlg.cpp:7: In file included from ./gui/dlgs/./../app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/dlgs/cursorsdlg.cpp:7: In file included from ./gui/dlgs/./../app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ CXX libstimfit_la-fitseldlg.lo CXX libstimfit_la-smalldlgs.lo CXX libstimfit_la-usrdlg.lo 7 warnings generated. In file included from ./gui/dlgs/fitseldlg.cpp:7: In file included from ./gui/dlgs/./../app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/dlgs/fitseldlg.cpp:7: In file included from ./gui/dlgs/./../app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./gui/dlgs/smalldlgs.cpp:12: In file included from ./gui/dlgs/./../app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./gui/dlgs/smalldlgs.cpp:12: In file included from ./gui/dlgs/./../app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ 7 warnings generated. 7 warnings generated. CXXLD libstimfit.la clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] ar: `u' modifier ignored since `D' is the default (see `U') make[4]: Leaving directory '/<>/src/stimfit' Making all in stimfit/py make[4]: Entering directory '/<>/src/stimfit/py' /usr/bin/swig -c++ -python -o pystf_wrap.cxx pystf.i CXX libpystf_la-pystf.lo pystf.i:74: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. pystf.i:74: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. pystf.i:74: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. cat ./gccwarn ./pystf_wrap.cxx > ./pystf_wrap_tmp.cxx mv ./pystf_wrap_tmp.cxx ./pystf_wrap.cxx CXX libpystf_la-pystf_wrap.lo In file included from ./pystf_wrap.cxx:177: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./pystf_wrap.cxx:177: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./pystf.cxx:25: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./pystf.cxx:25: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ./pystf.cxx:65: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from ./pystf_wrap.cxx:3138: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 8 warnings generated. 8 warnings generated. CXXLD libpystf.la clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] ar: `u' modifier ignored since `D' is the default (see `U') make[4]: Leaving directory '/<>/src/stimfit/py' make[4]: Entering directory '/<>/src' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' CXX stimfit-main.o In file included from ./src/stimfit/gui/main.cpp:7: In file included from ./src/stimfit/gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ./src/stimfit/gui/main.cpp:7: In file included from ./src/stimfit/gui/./app.h:191: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ 7 warnings generated. CXXLD stimfit make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' /usr/bin/make check make[1]: Entering directory '/<>' Making check in src make[2]: Entering directory '/<>/src' Making check in libbiosiglite make[3]: Entering directory '/<>/src/libbiosiglite' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/libbiosiglite' Making check in libstfio make[3]: Entering directory '/<>/src/libstfio' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/libstfio' Making check in libstfnum make[3]: Entering directory '/<>/src/libstfnum' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/libstfnum' Making check in stimfit make[3]: Entering directory '/<>/src/stimfit' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/stimfit' Making check in stimfit/py make[3]: Entering directory '/<>/src/stimfit/py' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/stimfit/py' make[3]: Entering directory '/<>/src' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' /usr/bin/make stimfittest make[3]: Entering directory '/<>' CXX stimfittest-section.o CXX stimfittest-channel.o CXX stimfittest-recording.o CXX stimfittest-fit.o CXX stimfittest-measure.o CXX stimfittest-gtest-all.o CXX stimfittest-gtest_main.o ./src/test/fit.cpp:241:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, 1.0, funcLib[0], opts, ^ ./src/test/fit.cpp:291:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[0], opts, ^ ./src/test/fit.cpp:338:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[1], opts, ^ ./src/test/fit.cpp:385:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[2], opts, ^ ./src/test/fit.cpp:434:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[3], opts, ^ ./src/test/fit.cpp:487:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[4], opts, ^ ./src/test/fit.cpp:536:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[5], opts, ^ ./src/test/fit.cpp:593:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[6], opts, ^ ./src/test/fit.cpp:653:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[7], opts, ^ ./src/test/fit.cpp:712:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[8], opts, ^ ./src/test/fit.cpp:765:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[9], opts, ^ ./src/test/fit.cpp:814:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[10], opts, ^ ./src/test/fit.cpp:863:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[11], opts, ^ ./src/test/fit.cpp:910:12: warning: unused variable 'chisqr' [-Wunused-variable] double chisqr = stfnum::lmFit(data, dt, funcLib[12], opts, ^ 14 warnings generated. CXXLD stimfittest make[3]: Leaving directory '/<>' /usr/bin/make check-TESTS make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' PASS: stimfittest ============================================================================ Testsuite summary for stimfit 0.15.6 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' /usr/bin/make install make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' Making install in libbiosiglite make[3]: Entering directory '/<>/src/libbiosiglite' make[4]: Entering directory '/<>/src/libbiosiglite' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/<>/debian/tmp/usr/lib/stimfit' /bin/bash ../../libtool --mode=install /usr/bin/install -c libbiosiglite.la '/<>/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/libbiosiglite.so /<>/debian/tmp/usr/lib/stimfit/libbiosiglite.so libtool: install: /usr/bin/install -c .libs/libbiosiglite.lai /<>/debian/tmp/usr/lib/stimfit/libbiosiglite.la libtool: install: /usr/bin/install -c .libs/libbiosiglite.a /<>/debian/tmp/usr/lib/stimfit/libbiosiglite.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/stimfit/libbiosiglite.a libtool: install: ranlib /<>/debian/tmp/usr/lib/stimfit/libbiosiglite.a libtool: finish: PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /<>/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /<>/debian/tmp/usr/lib/stimfit If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- make[4]: Leaving directory '/<>/src/libbiosiglite' make[3]: Leaving directory '/<>/src/libbiosiglite' Making install in libstfio make[3]: Entering directory '/<>/src/libstfio' make[4]: Entering directory '/<>/src/libstfio' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/<>/debian/tmp/usr/lib/stimfit' /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfio.la '/<>/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/libstfio.so /<>/debian/tmp/usr/lib/stimfit/libstfio.so libtool: install: /usr/bin/install -c .libs/libstfio.lai /<>/debian/tmp/usr/lib/stimfit/libstfio.la libtool: install: /usr/bin/install -c .libs/libstfio.a /<>/debian/tmp/usr/lib/stimfit/libstfio.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/stimfit/libstfio.a libtool: install: ranlib /<>/debian/tmp/usr/lib/stimfit/libstfio.a libtool: finish: PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /<>/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /<>/debian/tmp/usr/lib/stimfit If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- make[4]: Leaving directory '/<>/src/libstfio' make[3]: Leaving directory '/<>/src/libstfio' Making install in libstfnum make[3]: Entering directory '/<>/src/libstfnum' make[4]: Entering directory '/<>/src/libstfnum' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/<>/debian/tmp/usr/lib/stimfit' /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfnum.la '/<>/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/libstfnum.so /<>/debian/tmp/usr/lib/stimfit/libstfnum.so libtool: install: /usr/bin/install -c .libs/libstfnum.lai /<>/debian/tmp/usr/lib/stimfit/libstfnum.la libtool: install: /usr/bin/install -c .libs/libstfnum.a /<>/debian/tmp/usr/lib/stimfit/libstfnum.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/stimfit/libstfnum.a libtool: install: ranlib /<>/debian/tmp/usr/lib/stimfit/libstfnum.a libtool: finish: PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /<>/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /<>/debian/tmp/usr/lib/stimfit If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- make[4]: Leaving directory '/<>/src/libstfnum' make[3]: Leaving directory '/<>/src/libstfnum' Making install in stimfit make[3]: Entering directory '/<>/src/stimfit' make[4]: Entering directory '/<>/src/stimfit' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/<>/debian/tmp/usr/lib/stimfit' /bin/bash ../../libtool --mode=install /usr/bin/install -c libstimfit.la '/<>/debian/tmp/usr/lib/stimfit' libtool: warning: relinking 'libstimfit.la' libtool: install: (cd /<>/src/stimfit; /bin/bash "/<>/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib -lpython2.7 -Wl,-rpath,/usr/lib/stimfit -avoid-version -Wl,-z,relro -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libstimfit.la -rpath /<>/debian/tmp/usr/lib/stimfit libstimfit_la-stf.lo libstimfit_la-app.lo libstimfit_la-unopt.lo libstimfit_la-doc.lo libstimfit_la-copygrid.lo libstimfit_la-graph.lo libstimfit_la-printout.lo libstimfit_la-parentframe.lo libstimfit_la-childframe.lo libstimfit_la-view.lo libstimfit_la-table.lo libstimfit_la-zoom.lo libstimfit_la-convertdlg.lo libstimfit_la-cursorsdlg.lo libstimfit_la-eventdlg.lo libstimfit_la-fitseldlg.lo libstimfit_la-smalldlgs.lo libstimfit_la-usrdlg.lo -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk2u_core-3.0 -lwx_gtk2u_adv-3.0 -lwx_gtk2u_aui-3.0 -lwx_baseu_net-3.0 ../libstfio/libstfio.la ../libstfnum/libstfnum.la ../libbiosiglite/libbiosiglite.la ) clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] libtool: install: /usr/bin/install -c .libs/libstimfit.soT /<>/debian/tmp/usr/lib/stimfit/libstimfit.so libtool: install: /usr/bin/install -c .libs/libstimfit.lai /<>/debian/tmp/usr/lib/stimfit/libstimfit.la libtool: install: /usr/bin/install -c .libs/libstimfit.a /<>/debian/tmp/usr/lib/stimfit/libstimfit.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/stimfit/libstimfit.a libtool: install: ranlib /<>/debian/tmp/usr/lib/stimfit/libstimfit.a libtool: finish: PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /<>/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /<>/debian/tmp/usr/lib/stimfit If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- make[4]: Leaving directory '/<>/src/stimfit' make[3]: Leaving directory '/<>/src/stimfit' Making install in stimfit/py make[3]: Entering directory '/<>/src/stimfit/py' make[4]: Entering directory '/<>/src/stimfit/py' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/<>/debian/tmp/usr/lib/stimfit' /bin/bash ../../../libtool --mode=install /usr/bin/install -c libpystf.la '/<>/debian/tmp/usr/lib/stimfit' libtool: warning: relinking 'libpystf.la' libtool: install: (cd /<>/src/stimfit/py; /bin/bash "/<>/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib -lpython2.7 -Wl,-rpath,/usr/lib/stimfit -avoid-version -lcholmod -Wl,-z,relro -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libpystf.la -rpath /<>/debian/tmp/usr/lib/stimfit libpystf_la-pystf.lo libpystf_la-pystf_wrap.lo ../libstimfit.la ../../libstfio/libstfio.la -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk2u_core-3.0 -lwx_gtk2u_adv-3.0 -lwx_gtk2u_aui-3.0 -lwx_baseu_net-3.0 ../../libbiosiglite/libbiosiglite.la ) clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument] libtool: install: /usr/bin/install -c .libs/libpystf.soT /<>/debian/tmp/usr/lib/stimfit/libpystf.so libtool: install: /usr/bin/install -c .libs/libpystf.lai /<>/debian/tmp/usr/lib/stimfit/libpystf.la libtool: install: /usr/bin/install -c .libs/libpystf.a /<>/debian/tmp/usr/lib/stimfit/libpystf.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/stimfit/libpystf.a libtool: install: ranlib /<>/debian/tmp/usr/lib/stimfit/libpystf.a libtool: finish: PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /<>/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /<>/debian/tmp/usr/lib/stimfit If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- /usr/bin/make install-exec-hook make[5]: Entering directory '/<>/src/stimfit/py' cd /<>/debian/tmp/usr/lib/stimfit && ln -sf libpystf.so _stf.so rm -f /<>/debian/tmp/usr/lib/stimfit/*.la rm -f /<>/debian/tmp/usr/lib/stimfit/*.a cp -p ./ivtools.py /<>/debian/tmp/usr/lib/stimfit cp -p ./mintools.py /<>/debian/tmp/usr/lib/stimfit cp -p ./natools.py /<>/debian/tmp/usr/lib/stimfit cp -p ./minidemo.py /<>/debian/tmp/usr/lib/stimfit cp -p ./charlie.py /<>/debian/tmp/usr/lib/stimfit cp -p ./hdf5tools.py /<>/debian/tmp/usr/lib/stimfit cp -p ./stf.py /<>/debian/tmp/usr/lib/stimfit cp -p ./spells.py /<>/debian/tmp/usr/lib/stimfit cp -p ./tdms.py /<>/debian/tmp/usr/lib/stimfit cp -p ./embedded_init.py /<>/debian/tmp/usr/lib/stimfit cp -p ./embedded_stf.py /<>/debian/tmp/usr/lib/stimfit cp -p ./embedded_mpl.py /<>/debian/tmp/usr/lib/stimfit cp -p ./embedded_ipython.py /<>/debian/tmp/usr/lib/stimfit cp -p ./heka.py /<>/debian/tmp/usr/lib/stimfit cp -p ./extensions.py /<>/debian/tmp/usr/lib/stimfit cp -p ./../../pystfio/stfio_plot.py /<>/debian/tmp/usr/lib/stimfit chmod -x /<>/debian/tmp/usr/lib/stimfit/*.py make[5]: Leaving directory '/<>/src/stimfit/py' make[4]: Leaving directory '/<>/src/stimfit/py' make[3]: Leaving directory '/<>/src/stimfit/py' make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ./libtool --mode=install /usr/bin/install -c stimfit '/<>/debian/tmp/usr/bin' libtool: warning: './src/stimfit/libstimfit.la' has not been installed in '/<>/debian/tmp/usr/lib/stimfit' libtool: warning: './src/libstfio/libstfio.la' has not been installed in '/<>/debian/tmp/usr/lib/stimfit' libtool: warning: './src/libstfnum/libstfnum.la' has not been installed in '/<>/debian/tmp/usr/lib/stimfit' libtool: warning: './src/libbiosiglite/libbiosiglite.la' has not been installed in '/<>/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/stimfit /<>/debian/tmp/usr/bin/stimfit /usr/bin/make install-exec-hook make[4]: Entering directory '/<>' /bin/bash ./libtool --finish /<>/debian/tmp/usr/lib/stimfit libtool: finish: PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /<>/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /<>/debian/tmp/usr/lib/stimfit If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- chrpath -r /usr/lib/stimfit /<>/debian/tmp/usr/bin/stimfit /<>/debian/tmp/usr/bin/stimfit: RUNPATH=/usr/lib/stimfit:/<>/debian/tmp/usr/lib/stimfit /<>/debian/tmp/usr/bin/stimfit: new RUNPATH: /usr/lib/stimfit chrpath -r /usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libpystf.so /<>/debian/tmp/usr/lib/stimfit/libpystf.so: RUNPATH=/<>/debian/tmp/usr/lib/stimfit:/usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libpystf.so: new RUNPATH: /usr/lib/stimfit chrpath -r /usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libstimfit.so /<>/debian/tmp/usr/lib/stimfit/libstimfit.so: RUNPATH=/<>/debian/tmp/usr/lib/stimfit:/usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libstimfit.so: new RUNPATH: /usr/lib/stimfit chrpath -r /usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libstfio.so /<>/debian/tmp/usr/lib/stimfit/libstfio.so: RUNPATH=/usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libstfio.so: new RUNPATH: /usr/lib/stimfit chrpath -r /usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libstfnum.so /<>/debian/tmp/usr/lib/stimfit/libstfnum.so: RUNPATH=/usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libstfnum.so: new RUNPATH: /usr/lib/stimfit chrpath -r /usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libbiosiglite.so /<>/debian/tmp/usr/lib/stimfit/libbiosiglite.so: RUNPATH=/usr/lib/stimfit /<>/debian/tmp/usr/lib/stimfit/libbiosiglite.so: new RUNPATH: /usr/lib/stimfit install -d /<>/debian/tmp/usr/share/pixmaps install -d /<>/debian/tmp/usr/share/applications install -m 644 ./src/stimfit/res/stimfit16x16.xpm /<>/debian/tmp/usr/share/pixmaps/stimfit16x16.xpm install -m 644 ./src/stimfit/res/stimfit32x32.xpm /<>/debian/tmp/usr/share/pixmaps/stimfit32x32.xpm install -m 644 ./dist/debian/stimfit.desktop /<>/debian/tmp/usr/share/applications/ make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' ./configure --enable-module --enable-debian --with-biosiglite --prefix=/<>/debian/tmp/usr checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... no checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C preprocessor... gcc -E checking for gawk... (cached) mawk checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for kernel... linux or similar checking for python... /usr/bin/python checking for a version of Python >= '2.1.0'... yes checking for the distutils Python package... yes checking for Python include path... -I/usr/include/python2.7 checking for Python library path... -L/usr/lib -lpython2.7 checking for prefixed Python site-packages path... /<>/debian/tmp/usr/lib/python2.7/dist-packages checking for prefixed Python dist-packages path... /<>/debian/tmp/usr/lib/python2.7/site-packages checking for unprefixed Python dist-packages path... /usr/lib/python2.7/dist-packages checking for numpy... yes checking for numpy include path... -I/usr/lib/python2.7/dist-packages/numpy/core/include checking python extra libraries... -L/usr/lib -lz -lpthread -ldl -lutil checking python extra linking flags... -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions checking consistency of all components of python development environment... yes checking for swig... /usr/bin/swig checking for SWIG version... 3.0.12 checking for kernel... checking for fftw_malloc in -lfftw3... yes checking for dgemm_ in -llapack... no checking for dgemm_ in -llapack3... no checking for dgemm_ in -llapack-3... no checking for dgemm_ in -lblas... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for HDF5... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5Fopen in -lhdf5... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/libstfio/Makefile config.status: creating src/libstfnum/Makefile config.status: creating src/libbiosiglite/Makefile config.status: creating src/pystfio/Makefile config.status: creating src/stimfit/Makefile config.status: creating src/stimfit/py/Makefile config.status: creating dist/macosx/stimfit.plist config.status: creating stfconf.h config.status: stfconf.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands /usr/bin/make make[1]: Entering directory '/<>' /usr/bin/make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' Making all in libbiosiglite make[4]: Entering directory '/<>/src/libbiosiglite' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/src/libbiosiglite' Making all in libstfio make[4]: Entering directory '/<>/src/libstfio' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/src/libstfio' Making all in libstfnum make[4]: Entering directory '/<>/src/libstfnum' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/src/libstfnum' Making all in pystfio make[4]: Entering directory '/<>/src/pystfio' /usr/bin/swig -c++ -python -o ../../src/pystfio/pystfio_wrap.cxx ../../src/pystfio/pystfio.i CXX libpystfio_la-pystfio.lo In file included from ../../src/pystfio/pystfio.cxx:20: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ../../src/pystfio/pystfio.cxx:20: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ ../../src/pystfio/pystfio.i:391: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. ../../src/pystfio/pystfio.i:391: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. ../../src/pystfio/pystfio.i:391: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. cat ../../src/stimfit/py/gccwarn ../../src/pystfio/pystfio_wrap.cxx > ../../src/pystfio/pystfio_wrap_tmp.cxx mv ../../src/pystfio/pystfio_wrap_tmp.cxx ../../src/pystfio/pystfio_wrap.cxx CXX libpystfio_la-pystfio_wrap.lo In file included from ../../src/pystfio/pystfio_wrap.cxx:177: In file included from /usr/include/python2.7/Python.h:88: /usr/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /usr/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from ../../src/pystfio/pystfio_wrap.cxx:177: In file included from /usr/include/python2.7/Python.h:97: /usr/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /usr/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ In file included from ../../src/pystfio/pystfio_wrap.cxx:3129: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from ../../src/pystfio/pystfio.cxx:44: In file included from ./pystfio.h:7: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18: In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1809: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ ../../src/pystfio/pystfio_wrap.cxx:3636:29: error: non-constant-expression cannot be narrowed from type 'size_t' (aka 'unsigned long') to 'npy_intp' (aka 'long') in initializer list [-Wc++11-narrowing] npy_intp dims[1] = {self->size()}; ^~~~~~~~~~~~ ../../src/pystfio/pystfio_wrap.cxx:3636:29: note: insert an explicit cast to silence this issue npy_intp dims[1] = {self->size()}; ^~~~~~~~~~~~ static_cast( ) 8 warnings and 1 error generated. 8 warnings generated. make[4]: *** [Makefile:691: libpystfio_la-pystfio_wrap.lo] Error 1 make[4]: *** Waiting for unfinished jobs.... make[4]: Leaving directory '/<>/src/pystfio' make[3]: *** [Makefile:400: all-recursive] Error 1 make[3]: Leaving directory '/<>/src' make[2]: *** [Makefile:1286: all-recursive] Error 1 make[2]: Leaving directory '/<>' make[1]: *** [Makefile:980: all] Error 2 make[1]: Leaving directory '/<>' make: *** [debian/rules:53: install] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2018-05-02T12:44:54Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 212864 Build-Time: 135 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 37 Job: stimfit_0.15.6-1 Machine Architecture: amd64 Package: stimfit Package-Time: 188 Source-Version: 0.15.6-1 Space: 212864 Status: attempted Version: 0.15.6-1 -------------------------------------------------------------------------------- Finished at 2018-05-02T12:44:54Z Build needed 00:03:08, 212864k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 189.429492503s DC-Time-Estimation: 189.429492503 versus expected 379 (r/m: 1.0007444194255959 ; m: 189.429492503)