DC-Build-Header: dolfin 2018.1.0.post1-13 / 2019-01-09 18:55:14 +0000 DC-Task: type:rebuild-binarch-only source:dolfin version:2018.1.0.post1-13 chroot:unstable esttime: logfile:/tmp/dolfin_2018.1.0.post1-13_unstable_clang8.log modes:clang8:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang8 dolfin_2018.1.0.post1-13' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-12-253.eu-central-1.compute.internal +==============================================================================+ | dolfin 2018.1.0.post1-13 (amd64) Wed, 09 Jan 2019 18:55:14 +0000 | +==============================================================================+ Package: dolfin Version: 2018.1.0.post1-13 Source Version: 2018.1.0.post1-13 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-c6429cee-e68d-4e98-8d30-f5362e9b1906' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang8 ----------- + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=8 + echo 'Install of clang-8' Install of clang-8 + echo deb http://127.0.0.1:9999/debian experimental main + apt-get update Get:1 http://127.0.0.1:9999/debian sid InRelease [238 kB] Get:2 http://127.0.0.1:9999/debian experimental InRelease [101 kB] Get:3 http://127.0.0.1:9999/debian sid/main Sources.diff/Index [27.9 kB] Get:4 http://127.0.0.1:9999/debian sid/main amd64 Packages.diff/Index [27.9 kB] Get:5 http://127.0.0.1:9999/debian sid/main Sources 2019-01-09-1430.36.pdiff [24.1 kB] Get:5 http://127.0.0.1:9999/debian sid/main Sources 2019-01-09-1430.36.pdiff [24.1 kB] Get:6 http://127.0.0.1:9999/debian sid/main amd64 Packages 2019-01-09-1430.36.pdiff [40.9 kB] Get:6 http://127.0.0.1:9999/debian sid/main amd64 Packages 2019-01-09-1430.36.pdiff [40.9 kB] Get:7 http://127.0.0.1:9999/debian sid/main Translation-en [6275 kB] Get:8 http://127.0.0.1:9999/debian experimental/main amd64 Packages [245 kB] Get:9 http://127.0.0.1:9999/debian experimental/main Translation-en [173 kB] Fetched 7153 kB in 2s (3375 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-8 libomp-8-dev libobjc-8-dev Reading package lists... Building dependency tree... The following additional packages will be installed: lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-8-dev libclang1-8 libedit2 libgc1c2 libllvm8 libobjc4 libomp5-8 Suggested packages: clang-8-doc libomp-8-doc Recommended packages: llvm-8-dev python The following NEW packages will be installed: clang-8 lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-8-dev libclang1-8 libedit2 libgc1c2 libllvm8 libobjc-8-dev libobjc4 libomp-8-dev libomp5-8 0 upgraded, 14 newly installed, 0 to remove and 5 not upgraded. Need to get 35.8 MB of archives. After this operation, 191 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian sid/main amd64 libbsd0 amd64 0.9.1-1 [99.3 kB] Get:2 http://127.0.0.1:9999/debian sid/main amd64 libedit2 amd64 3.1-20181209-1 [94.0 kB] Get:3 http://127.0.0.1:9999/debian experimental/main amd64 libllvm8 amd64 1:8~svn350193-1~exp1 [13.8 MB] Get:4 http://127.0.0.1:9999/debian sid/main amd64 libgc1c2 amd64 1:7.6.4-0.4 [224 kB] Get:5 http://127.0.0.1:9999/debian sid/main amd64 libobjc4 amd64 8.2.0-14 [50.4 kB] Get:6 http://127.0.0.1:9999/debian sid/main amd64 libobjc-8-dev amd64 8.2.0-14 [225 kB] Get:7 http://127.0.0.1:9999/debian sid/main amd64 libc6-i386 amd64 2.28-4 [2873 kB] Get:8 http://127.0.0.1:9999/debian sid/main amd64 lib32gcc1 amd64 1:8.2.0-14 [47.9 kB] Get:9 http://127.0.0.1:9999/debian sid/main amd64 lib32stdc++6 amd64 8.2.0-14 [406 kB] Get:10 http://127.0.0.1:9999/debian experimental/main amd64 libclang-common-8-dev amd64 1:8~svn350193-1~exp1 [3350 kB] Get:11 http://127.0.0.1:9999/debian experimental/main amd64 libclang1-8 amd64 1:8~svn350193-1~exp1 [6255 kB] Get:12 http://127.0.0.1:9999/debian experimental/main amd64 clang-8 amd64 1:8~svn350193-1~exp1 [8025 kB] Get:13 http://127.0.0.1:9999/debian experimental/main amd64 libomp5-8 amd64 1:8~svn350193-1~exp1 [328 kB] Get:14 http://127.0.0.1:9999/debian experimental/main amd64 libomp-8-dev amd64 1:8~svn350193-1~exp1 [58.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 35.8 MB in 0s (117 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11802 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../01-libedit2_3.1-20181209-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20181209-1) ... Selecting previously unselected package libllvm8:amd64. Preparing to unpack .../02-libllvm8_1%3a8~svn350193-1~exp1_amd64.deb ... Unpacking libllvm8:amd64 (1:8~svn350193-1~exp1) ... Selecting previously unselected package libgc1c2:amd64. Preparing to unpack .../03-libgc1c2_1%3a7.6.4-0.4_amd64.deb ... Unpacking libgc1c2:amd64 (1:7.6.4-0.4) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../04-libobjc4_8.2.0-14_amd64.deb ... Unpacking libobjc4:amd64 (8.2.0-14) ... Selecting previously unselected package libobjc-8-dev:amd64. Preparing to unpack .../05-libobjc-8-dev_8.2.0-14_amd64.deb ... Unpacking libobjc-8-dev:amd64 (8.2.0-14) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../06-libc6-i386_2.28-4_amd64.deb ... Unpacking libc6-i386 (2.28-4) ... Selecting previously unselected package lib32gcc1. Preparing to unpack .../07-lib32gcc1_1%3a8.2.0-14_amd64.deb ... Unpacking lib32gcc1 (1:8.2.0-14) ... Selecting previously unselected package lib32stdc++6. Preparing to unpack .../08-lib32stdc++6_8.2.0-14_amd64.deb ... Unpacking lib32stdc++6 (8.2.0-14) ... Selecting previously unselected package libclang-common-8-dev. Preparing to unpack .../09-libclang-common-8-dev_1%3a8~svn350193-1~exp1_amd64.deb ... Unpacking libclang-common-8-dev (1:8~svn350193-1~exp1) ... Selecting previously unselected package libclang1-8:amd64. Preparing to unpack .../10-libclang1-8_1%3a8~svn350193-1~exp1_amd64.deb ... Unpacking libclang1-8:amd64 (1:8~svn350193-1~exp1) ... Selecting previously unselected package clang-8. Preparing to unpack .../11-clang-8_1%3a8~svn350193-1~exp1_amd64.deb ... Unpacking clang-8 (1:8~svn350193-1~exp1) ... Selecting previously unselected package libomp5-8:amd64. Preparing to unpack .../12-libomp5-8_1%3a8~svn350193-1~exp1_amd64.deb ... Unpacking libomp5-8:amd64 (1:8~svn350193-1~exp1) ... Selecting previously unselected package libomp-8-dev. Preparing to unpack .../13-libomp-8-dev_1%3a8~svn350193-1~exp1_amd64.deb ... Unpacking libomp-8-dev (1:8~svn350193-1~exp1) ... Setting up libomp5-8:amd64 (1:8~svn350193-1~exp1) ... Setting up libgc1c2:amd64 (1:7.6.4-0.4) ... Setting up libc6-i386 (2.28-4) ... Setting up libbsd0:amd64 (0.9.1-1) ... Setting up libomp-8-dev (1:8~svn350193-1~exp1) ... Processing triggers for libc-bin (2.28-4) ... Setting up lib32gcc1 (1:8.2.0-14) ... Setting up libedit2:amd64 (3.1-20181209-1) ... Setting up libobjc4:amd64 (8.2.0-14) ... Setting up libobjc-8-dev:amd64 (8.2.0-14) ... Setting up libllvm8:amd64 (1:8~svn350193-1~exp1) ... Setting up libclang1-8:amd64 (1:8~svn350193-1~exp1) ... Setting up lib32stdc++6 (8.2.0-14) ... Setting up libclang-common-8-dev (1:8~svn350193-1~exp1) ... Setting up clang-8 (1:8~svn350193-1~exp1) ... Processing triggers for libc-bin (2.28-4) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-8 g++-4.6 + ln -s clang-8 gcc-4.6 + ln -s clang-8 cpp-4.6 + ln -s clang-8 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-8 g++-4.7 + ln -s clang-8 gcc-4.7 + ln -s clang-8 cpp-4.7 + ln -s clang-8 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-8 g++-4.8 + ln -s clang-8 gcc-4.8 + ln -s clang-8 cpp-4.8 + ln -s clang-8 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-8 g++-4.9 + ln -s clang-8 gcc-4.9 + ln -s clang-8 cpp-4.9 + ln -s clang-8 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-8 g++-5 + ln -s clang-8 gcc-5 + ln -s clang-8 cpp-5 + ln -s clang-8 gcc + echo 'gcc-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-8 g++-6 + ln -s clang-8 gcc-6 + ln -s clang-8 cpp-6 + ln -s clang-8 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-8 g++-7 + ln -s clang-8 gcc-7 + ln -s clang-8 cpp-7 + ln -s clang-8 gcc + echo 'gcc-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-8 g++-8 + ln -s clang-8 gcc-8 + ln -s clang-8 cpp-8 + ln -s clang-8 gcc + echo 'gcc-8 hold' + dpkg --set-selections + echo 'g++-8 hold' + dpkg --set-selections + cd - /build/dolfin-M8eCJs + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang8'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian sid InRelease Hit:2 http://127.0.0.1:9999/debian experimental InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libmpfr6 libpam-modules libpam-modules-bin libpam-runtime libpam0g 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1519 kB of archives. After this operation, 7168 B of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian sid/main amd64 libpam0g amd64 1.1.8-4 [124 kB] Get:2 http://127.0.0.1:9999/debian sid/main amd64 libpam-modules-bin amd64 1.1.8-4 [106 kB] Get:3 http://127.0.0.1:9999/debian sid/main amd64 libpam-modules amd64 1.1.8-4 [305 kB] Get:4 http://127.0.0.1:9999/debian sid/main amd64 libpam-runtime all 1.1.8-4 [211 kB] Get:5 http://127.0.0.1:9999/debian sid/main amd64 libmpfr6 amd64 4.0.2~rc1-1 [773 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1519 kB in 0s (27.8 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12592 files and directories currently installed.) Preparing to unpack .../libpam0g_1.1.8-4_amd64.deb ... Unpacking libpam0g:amd64 (1.1.8-4) over (1.1.8-3.8) ... Setting up libpam0g:amd64 (1.1.8-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12592 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.1.8-4_amd64.deb ... Unpacking libpam-modules-bin (1.1.8-4) over (1.1.8-3.8) ... Setting up libpam-modules-bin (1.1.8-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12592 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.1.8-4_amd64.deb ... Unpacking libpam-modules:amd64 (1.1.8-4) over (1.1.8-3.8) ... Setting up libpam-modules:amd64 (1.1.8-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12592 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.1.8-4_all.deb ... Unpacking libpam-runtime (1.1.8-4) over (1.1.8-3.8) ... Setting up libpam-runtime (1.1.8-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12592 files and directories currently installed.) Preparing to unpack .../libmpfr6_4.0.2~rc1-1_amd64.deb ... Unpacking libmpfr6:amd64 (4.0.2~rc1-1) over (4.0.1-2) ... Setting up libmpfr6:amd64 (4.0.2~rc1-1) ... Processing triggers for libc-bin (2.28-4) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'dolfin' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/fenics/dolfin.git Please use: git clone https://salsa.debian.org/science-team/fenics/dolfin.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 9092 kB of source archives. Get:1 http://127.0.0.1:9999/debian sid/main dolfin 2018.1.0.post1-13 (dsc) [3381 B] Get:2 http://127.0.0.1:9999/debian sid/main dolfin 2018.1.0.post1-13 (tar) [9063 kB] Get:3 http://127.0.0.1:9999/debian sid/main dolfin 2018.1.0.post1-13 (asc) [488 B] Get:4 http://127.0.0.1:9999/debian sid/main dolfin 2018.1.0.post1-13 (diff) [24.9 kB] Fetched 9092 kB in 1s (10.2 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/dolfin-M8eCJs/dolfin-2018.1.0.post1' with '<>' I: NOTICE: Log filtering will replace 'build/dolfin-M8eCJs' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-MqQGKP/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-MqQGKP/apt_archive ./ InRelease Get:2 copy:/<>/resolver-MqQGKP/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-MqQGKP/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-MqQGKP/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-MqQGKP/apt_archive ./ Packages [434 B] Fetched 1740 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-MqQGKP/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12592 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: cmake (>= 3.5), debhelper (>= 11), dh-python, gfortran, chrpath, libboost-chrono-dev, libboost-dev (>= 1.56), libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libeigen3-dev (>= 3.2.90), libhdf5-mpi-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, mpi-default-dev, petsc-dev (>= 3.7), slepc-dev (>= 3.7), pybind11-dev (>= 2.2.0), python3-setuptools, python3-petsc4py, python3-slepc4py, pkg-config, python3-all-dev, python3-pkg-resources, python3-ffc (>= 2018.1), python3-ffc (<< 2018.2), python3-dijitso (>= 2018.1), python3-dijitso (<< 2018.2), python3-numpy, python3-ply Filtered Build-Depends: cmake (>= 3.5), debhelper (>= 11), dh-python, gfortran, chrpath, libboost-chrono-dev, libboost-dev (>= 1.56), libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libeigen3-dev (>= 3.2.90), libhdf5-mpi-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, mpi-default-dev, petsc-dev (>= 3.7), slepc-dev (>= 3.7), pybind11-dev (>= 2.2.0), python3-setuptools, python3-petsc4py, python3-slepc4py, pkg-config, python3-all-dev, python3-pkg-resources, python3-ffc (>= 2018.1), python3-ffc (<< 2018.2), python3-dijitso (>= 2018.1), python3-dijitso (<< 2018.2), python3-numpy, python3-ply dpkg-deb: building package 'sbuild-build-depends-dolfin-dummy' in '/<>/resolver-MqQGKP/apt_archive/sbuild-build-depends-dolfin-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-dolfin-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-MqQGKP/apt_archive ./ InRelease Get:2 copy:/<>/resolver-MqQGKP/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-MqQGKP/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-MqQGKP/apt_archive ./ Sources [752 B] Get:5 copy:/<>/resolver-MqQGKP/apt_archive ./ Packages [829 B] Fetched 2544 B in 0s (0 B/s) Reading package lists... Reading package lists... Install dolfin build dependencies (apt-based resolver) ------------------------------------------------------ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils chrpath cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-mathjax gettext gettext-base gfortran gfortran-8 groff-base ibverbs-providers icu-devtools intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarchive13 libarpack2 libarpack2-dev libblas-dev libblas3 libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-system1.67-dev libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost1.67-dev libbtf1 libcamd2 libccolamd2 libcholmod3 libcolamd2 libcombblas1.16.0 libcroco3 libcurl4 libcxsparse3 libeigen3-dev libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgfortran-8-dev libgfortran5 libglib2.0-0 libgraphblas2 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libhwloc-dev libhwloc-plugins libhwloc5 libhypre-2.15.1 libhypre-dev libibverbs-dev libibverbs1 libicu-dev libicu63 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjs-mathjax libjsoncpp1 libk5crypto3 libkeyutils1 libklu1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libldl2 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmetis5 libmongoose2 libmpdec2 libmumps-5.1.2 libmumps-dev libncurses6 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libparpack2 libparpack2-dev libpciaccess0 libpetsc-real3.10 libpetsc-real3.10-dev libpetsc3.10-dev-common libpipeline1 libpmix2 libprocps7 libpsl5 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libptscotch-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librbio2 librdmacm1 libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.0 libscotch-6.0 libscotch-dev libsigsegv2 libslepc-real3.10 libslepc-real3.10-dev libspqr2 libsqlite3-0 libssh2-1 libssl-dev libssl1.1 libsuitesparse-dev libsuitesparseconfig5 libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist6 libsuperlu5 libsz2 libtool libuchardet0 libumfpack5 libuv1 libxml2 libxml2-dev lsb-base m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client petsc-dev pkg-config po-debconf procps pybind11-dev python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-all python3-all-dev python3-dev python3-dijitso python3-distutils python3-ffc python3-fiat python3-lib2to3 python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-petsc4py python3-petsc4py-real python3-pkg-resources python3-ply python3-setuptools python3-slepc4py python3-slepc4py-real python3-sympy python3-ufl python3.7 python3.7-dev python3.7-minimal readline-common sensible-utils slepc-dev swig swig3.0 zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-8-multilib gfortran-8-doc libgfortran5-dbg libcoarrays-dev groff lrzip liblapack-doc libboost-doc libboost-graph1.67-dev libboost1.67-doc libboost-container1.67-dev libboost-context1.67-dev libboost-coroutine1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-graph-parallel1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-test1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev libeigen3-doc libfftw3-doc krb5-doc krb5-user libhdf5-doc libhwloc-contrib-plugins icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc libtool-doc openmpi-doc pciutils libpetsc-real3.10-dbg petsc3.10-doc libluminate-dev scalapack-doc libslepc3.10-dev-examples slepc3.10-doc libssl-doc libsuperlu-doc gcj-jdk m4-doc apparmor less www-browser opencl-icd keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl pybind11-doc python-doc python-tk python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python-dijitso-doc python3-gmpy2 python3-matplotlib python-mpmath-doc python-numpy-doc python3-pytest python3-numpy-dbg python-ply-doc python-setuptools-doc python-slepc4py-docs texlive-fonts-extra dvipng python-sympy-doc python-ufl-doc python3.7-venv python3.7-doc readline-doc swig-doc swig-examples swig3.0-examples swig3.0-doc Recommended packages: curl | wget | lynx ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common krb5-locales libgpm2 libcoarrays-openmpi-dev libpetsc3.10-dev-examples ksh | mksh | pdksh | zsh publicsuffix libsasl2-modules xauth libmail-sendmail-perl psmisc python-petsc4py-docs python-slepc4py-docs python3-pil ipython3 The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils chrpath cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-mathjax gettext gettext-base gfortran gfortran-8 groff-base ibverbs-providers icu-devtools intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarchive13 libarpack2 libarpack2-dev libblas-dev libblas3 libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-system1.67-dev libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost1.67-dev libbtf1 libcamd2 libccolamd2 libcholmod3 libcolamd2 libcombblas1.16.0 libcroco3 libcurl4 libcxsparse3 libeigen3-dev libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgfortran-8-dev libgfortran5 libglib2.0-0 libgraphblas2 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libhwloc-dev libhwloc-plugins libhwloc5 libhypre-2.15.1 libhypre-dev libibverbs-dev libibverbs1 libicu-dev libicu63 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjs-mathjax libjsoncpp1 libk5crypto3 libkeyutils1 libklu1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libldl2 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmetis5 libmongoose2 libmpdec2 libmumps-5.1.2 libmumps-dev libncurses6 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libparpack2 libparpack2-dev libpciaccess0 libpetsc-real3.10 libpetsc-real3.10-dev libpetsc3.10-dev-common libpipeline1 libpmix2 libprocps7 libpsl5 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libptscotch-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librbio2 librdmacm1 libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.0 libscotch-6.0 libscotch-dev libsigsegv2 libslepc-real3.10 libslepc-real3.10-dev libspqr2 libsqlite3-0 libssh2-1 libssl-dev libssl1.1 libsuitesparse-dev libsuitesparseconfig5 libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist6 libsuperlu5 libsz2 libtool libuchardet0 libumfpack5 libuv1 libxml2 libxml2-dev lsb-base m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client petsc-dev pkg-config po-debconf procps pybind11-dev python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-all python3-all-dev python3-dev python3-dijitso python3-distutils python3-ffc python3-fiat python3-lib2to3 python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-petsc4py python3-petsc4py-real python3-pkg-resources python3-ply python3-setuptools python3-slepc4py python3-slepc4py-real python3-sympy python3-ufl python3.7 python3.7-dev python3.7-minimal readline-common sbuild-build-depends-dolfin-dummy sensible-utils slepc-dev swig swig3.0 zlib1g-dev 0 upgraded, 259 newly installed, 0 to remove and 0 not upgraded. Need to get 207 MB of archives. After this operation, 957 MB of additional disk space will be used. Get:1 copy:/<>/resolver-MqQGKP/apt_archive ./ sbuild-build-depends-dolfin-dummy 0.invalid.0 [1116 B] Get:2 http://127.0.0.1:9999/debian sid/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:3 http://127.0.0.1:9999/debian sid/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:4 http://127.0.0.1:9999/debian sid/main amd64 groff-base amd64 1.22.4-2 [917 kB] Get:5 http://127.0.0.1:9999/debian sid/main amd64 libpipeline1 amd64 1.5.0-2 [29.5 kB] Get:6 http://127.0.0.1:9999/debian sid/main amd64 man-db amd64 2.8.5-1 [1274 kB] Get:7 http://127.0.0.1:9999/debian sid/main amd64 libpython2.7-minimal amd64 2.7.15-5 [394 kB] Get:8 http://127.0.0.1:9999/debian sid/main amd64 python2.7-minimal amd64 2.7.15-5 [1365 kB] Get:9 http://127.0.0.1:9999/debian sid/main amd64 python2-minimal amd64 2.7.15-3 [41.3 kB] Get:10 http://127.0.0.1:9999/debian sid/main amd64 python-minimal amd64 2.7.15-3 [20.9 kB] Get:11 http://127.0.0.1:9999/debian sid/main amd64 mime-support all 3.61 [37.1 kB] Get:12 http://127.0.0.1:9999/debian sid/main amd64 libexpat1 amd64 2.2.6-1 [105 kB] Get:13 http://127.0.0.1:9999/debian sid/main amd64 readline-common all 7.0-5 [70.6 kB] Get:14 http://127.0.0.1:9999/debian sid/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:15 http://127.0.0.1:9999/debian sid/main amd64 libsqlite3-0 amd64 3.26.0+fossilbc891ac6b-1 [634 kB] Get:16 http://127.0.0.1:9999/debian sid/main amd64 libssl1.1 amd64 1.1.1a-1 [1527 kB] Get:17 http://127.0.0.1:9999/debian sid/main amd64 libpython2.7-stdlib amd64 2.7.15-5 [1909 kB] Get:18 http://127.0.0.1:9999/debian sid/main amd64 python2.7 amd64 2.7.15-5 [299 kB] Get:19 http://127.0.0.1:9999/debian sid/main amd64 libpython2-stdlib amd64 2.7.15-3 [20.7 kB] Get:20 http://127.0.0.1:9999/debian sid/main amd64 libpython-stdlib amd64 2.7.15-3 [20.7 kB] Get:21 http://127.0.0.1:9999/debian sid/main amd64 python2 amd64 2.7.15-3 [41.5 kB] Get:22 http://127.0.0.1:9999/debian sid/main amd64 python amd64 2.7.15-3 [22.7 kB] Get:23 http://127.0.0.1:9999/debian sid/main amd64 libpython3.7-minimal amd64 3.7.2-1 [588 kB] Get:24 http://127.0.0.1:9999/debian sid/main amd64 python3.7-minimal amd64 3.7.2-1 [1732 kB] Get:25 http://127.0.0.1:9999/debian sid/main amd64 python3-minimal amd64 3.7.1-3 [36.5 kB] Get:26 http://127.0.0.1:9999/debian sid/main amd64 libmpdec2 amd64 2.4.2-2 [87.2 kB] Get:27 http://127.0.0.1:9999/debian sid/main amd64 libpython3.7-stdlib amd64 3.7.2-1 [1733 kB] Get:28 http://127.0.0.1:9999/debian sid/main amd64 python3.7 amd64 3.7.2-1 [323 kB] Get:29 http://127.0.0.1:9999/debian sid/main amd64 libpython3-stdlib amd64 3.7.1-3 [20.0 kB] Get:30 http://127.0.0.1:9999/debian sid/main amd64 python3 amd64 3.7.1-3 [61.5 kB] Get:31 http://127.0.0.1:9999/debian sid/main amd64 libncurses6 amd64 6.1+20181013-1 [102 kB] Get:32 http://127.0.0.1:9999/debian sid/main amd64 libprocps7 amd64 2:3.3.15-2 [61.7 kB] Get:33 http://127.0.0.1:9999/debian sid/main amd64 lsb-base all 10.2018112800 [28.3 kB] Get:34 http://127.0.0.1:9999/debian sid/main amd64 procps amd64 2:3.3.15-2 [259 kB] Get:35 http://127.0.0.1:9999/debian sid/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:36 http://127.0.0.1:9999/debian sid/main amd64 libmagic-mgc amd64 1:5.34-2 [239 kB] Get:37 http://127.0.0.1:9999/debian sid/main amd64 libmagic1 amd64 1:5.34-2 [116 kB] Get:38 http://127.0.0.1:9999/debian sid/main amd64 file amd64 1:5.34-2 [65.8 kB] Get:39 http://127.0.0.1:9999/debian sid/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:40 http://127.0.0.1:9999/debian sid/main amd64 libkeyutils1 amd64 1.5.9-9.3 [13.0 kB] Get:41 http://127.0.0.1:9999/debian sid/main amd64 libkrb5support0 amd64 1.16.2-1 [63.3 kB] Get:42 http://127.0.0.1:9999/debian sid/main amd64 libk5crypto3 amd64 1.16.2-1 [121 kB] Get:43 http://127.0.0.1:9999/debian sid/main amd64 libkrb5-3 amd64 1.16.2-1 [320 kB] Get:44 http://127.0.0.1:9999/debian sid/main amd64 libgssapi-krb5-2 amd64 1.16.2-1 [158 kB] Get:45 http://127.0.0.1:9999/debian sid/main amd64 openssh-client amd64 1:7.9p1-4 [797 kB] Get:46 http://127.0.0.1:9999/debian sid/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:47 http://127.0.0.1:9999/debian sid/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:48 http://127.0.0.1:9999/debian sid/main amd64 autoconf all 2.69-11 [341 kB] Get:49 http://127.0.0.1:9999/debian sid/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:50 http://127.0.0.1:9999/debian sid/main amd64 automake all 1:1.16.1-4 [771 kB] Get:51 http://127.0.0.1:9999/debian sid/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:52 http://127.0.0.1:9999/debian sid/main amd64 chrpath amd64 0.16-2+b1 [17.1 kB] Get:53 http://127.0.0.1:9999/debian sid/main amd64 cmake-data all 3.13.2-1 [1476 kB] Get:54 http://127.0.0.1:9999/debian sid/main amd64 libicu63 amd64 63.1-5 [8293 kB] Get:55 http://127.0.0.1:9999/debian sid/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:56 http://127.0.0.1:9999/debian sid/main amd64 libarchive13 amd64 3.3.3-3 [313 kB] Get:57 http://127.0.0.1:9999/debian sid/main amd64 libsasl2-modules-db amd64 2.1.27~rc8-1 [68.4 kB] Get:58 http://127.0.0.1:9999/debian sid/main amd64 libsasl2-2 amd64 2.1.27~rc8-1 [105 kB] Get:59 http://127.0.0.1:9999/debian sid/main amd64 libldap-common all 2.4.47+dfsg-1 [88.8 kB] Get:60 http://127.0.0.1:9999/debian sid/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-1 [224 kB] Get:61 http://127.0.0.1:9999/debian sid/main amd64 libnghttp2-14 amd64 1.35.1-1+b1 [82.4 kB] Get:62 http://127.0.0.1:9999/debian sid/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get:63 http://127.0.0.1:9999/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2 [60.5 kB] Get:64 http://127.0.0.1:9999/debian sid/main amd64 libssh2-1 amd64 1.8.0-2 [138 kB] Get:65 http://127.0.0.1:9999/debian sid/main amd64 libcurl4 amd64 7.62.0-1 [324 kB] Get:66 http://127.0.0.1:9999/debian sid/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:67 http://127.0.0.1:9999/debian sid/main amd64 librhash0 amd64 1.3.7-1 [104 kB] Get:68 http://127.0.0.1:9999/debian sid/main amd64 libuv1 amd64 1.24.0-1 [109 kB] Get:69 http://127.0.0.1:9999/debian sid/main amd64 cmake amd64 3.13.2-1 [3485 kB] Get:70 http://127.0.0.1:9999/debian sid/main amd64 libtool all 2.4.6-6 [547 kB] Get:71 http://127.0.0.1:9999/debian sid/main amd64 dh-autoreconf all 19 [16.9 kB] Get:72 http://127.0.0.1:9999/debian sid/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:73 http://127.0.0.1:9999/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.0.0-1 [19.5 kB] Get:74 http://127.0.0.1:9999/debian sid/main amd64 dh-strip-nondeterminism all 1.0.0-1 [12.5 kB] Get:75 http://127.0.0.1:9999/debian sid/main amd64 libelf1 amd64 0.175-2 [160 kB] Get:76 http://127.0.0.1:9999/debian sid/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:77 http://127.0.0.1:9999/debian sid/main amd64 libglib2.0-0 amd64 2.58.2-3 [1257 kB] Get:78 http://127.0.0.1:9999/debian sid/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:79 http://127.0.0.1:9999/debian sid/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:80 http://127.0.0.1:9999/debian sid/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:81 http://127.0.0.1:9999/debian sid/main amd64 po-debconf all 1.0.21 [248 kB] Get:82 http://127.0.0.1:9999/debian sid/main amd64 debhelper all 12 [1002 kB] Get:83 http://127.0.0.1:9999/debian sid/main amd64 python3-lib2to3 all 3.7.2-2 [76.6 kB] Get:84 http://127.0.0.1:9999/debian sid/main amd64 python3-distutils all 3.7.2-2 [142 kB] Get:85 http://127.0.0.1:9999/debian sid/main amd64 dh-python all 3.20180927 [95.8 kB] Get:86 http://127.0.0.1:9999/debian sid/main amd64 fonts-mathjax all 2.7.4+dfsg-1 [2209 kB] Get:87 http://127.0.0.1:9999/debian sid/main amd64 libgfortran5 amd64 8.2.0-14 [581 kB] Get:88 http://127.0.0.1:9999/debian sid/main amd64 libgfortran-8-dev amd64 8.2.0-14 [616 kB] Get:89 http://127.0.0.1:9999/debian sid/main amd64 gfortran-8 amd64 8.2.0-14 [7607 kB] Get:90 http://127.0.0.1:9999/debian sid/main amd64 gfortran amd64 4:8.2.0-2 [1432 B] Get:91 http://127.0.0.1:9999/debian sid/main amd64 libnl-3-200 amd64 3.4.0-1 [63.0 kB] Get:92 http://127.0.0.1:9999/debian sid/main amd64 libnl-route-3-200 amd64 3.4.0-1 [162 kB] Get:93 http://127.0.0.1:9999/debian sid/main amd64 libibverbs1 amd64 21.0-1 [50.8 kB] Get:94 http://127.0.0.1:9999/debian sid/main amd64 ibverbs-providers amd64 21.0-1 [186 kB] Get:95 http://127.0.0.1:9999/debian sid/main amd64 icu-devtools amd64 63.1-5 [191 kB] Get:96 http://127.0.0.1:9999/debian sid/main amd64 libaec0 amd64 1.0.2-1 [20.1 kB] Get:97 http://127.0.0.1:9999/debian sid/main amd64 libsz2 amd64 1.0.2-1 [6676 B] Get:98 http://127.0.0.1:9999/debian sid/main amd64 libaec-dev amd64 1.0.2-1 [18.4 kB] Get:99 http://127.0.0.1:9999/debian sid/main amd64 libsuitesparseconfig5 amd64 1:5.4.0+dfsg-1 [20.9 kB] Get:100 http://127.0.0.1:9999/debian sid/main amd64 libamd2 amd64 1:5.4.0+dfsg-1 [33.4 kB] Get:101 http://127.0.0.1:9999/debian sid/main amd64 libblas3 amd64 3.8.0-2 [148 kB] Get:102 http://127.0.0.1:9999/debian sid/main amd64 liblapack3 amd64 3.8.0-2 [2110 kB] Get:103 http://127.0.0.1:9999/debian sid/main amd64 libarpack2 amd64 3.6.3-1 [99.7 kB] Get:104 http://127.0.0.1:9999/debian sid/main amd64 libblas-dev amd64 3.8.0-2 [154 kB] Get:105 http://127.0.0.1:9999/debian sid/main amd64 liblapack-dev amd64 3.8.0-2 [2140 kB] Get:106 http://127.0.0.1:9999/debian sid/main amd64 libarpack2-dev amd64 3.6.3-1 [108 kB] Get:107 http://127.0.0.1:9999/debian sid/main amd64 libboost1.67-dev amd64 1.67.0-11 [8386 kB] Get:108 http://127.0.0.1:9999/debian sid/main amd64 libboost-atomic1.67.0 amd64 1.67.0-11 [226 kB] Get:109 http://127.0.0.1:9999/debian sid/main amd64 libboost-atomic1.67-dev amd64 1.67.0-11 [224 kB] Get:110 http://127.0.0.1:9999/debian sid/main amd64 libboost-system1.67.0 amd64 1.67.0-11 [229 kB] Get:111 http://127.0.0.1:9999/debian sid/main amd64 libboost-chrono1.67.0 amd64 1.67.0-11 [233 kB] Get:112 http://127.0.0.1:9999/debian sid/main amd64 libboost-chrono1.67-dev amd64 1.67.0-11 [236 kB] Get:113 http://127.0.0.1:9999/debian sid/main amd64 libboost-chrono-dev amd64 1.67.0.1 [4268 B] Get:114 http://127.0.0.1:9999/debian sid/main amd64 libboost-date-time1.67.0 amd64 1.67.0-11 [238 kB] Get:115 http://127.0.0.1:9999/debian sid/main amd64 libboost-serialization1.67.0 amd64 1.67.0-11 [319 kB] Get:116 http://127.0.0.1:9999/debian sid/main amd64 libboost-serialization1.67-dev amd64 1.67.0-11 [359 kB] Get:117 http://127.0.0.1:9999/debian sid/main amd64 libboost-date-time1.67-dev amd64 1.67.0-11 [247 kB] Get:118 http://127.0.0.1:9999/debian sid/main amd64 libboost-dev amd64 1.67.0.1 [3864 B] Get:119 http://127.0.0.1:9999/debian sid/main amd64 libboost-filesystem1.67.0 amd64 1.67.0-11 [261 kB] Get:120 http://127.0.0.1:9999/debian sid/main amd64 libboost-system1.67-dev amd64 1.67.0-11 [231 kB] Get:121 http://127.0.0.1:9999/debian sid/main amd64 libboost-filesystem1.67-dev amd64 1.67.0-11 [268 kB] Get:122 http://127.0.0.1:9999/debian sid/main amd64 libboost-filesystem-dev amd64 1.67.0.1 [3684 B] Get:123 http://127.0.0.1:9999/debian sid/main amd64 libboost-regex1.67.0 amd64 1.67.0-11 [484 kB] Get:124 http://127.0.0.1:9999/debian sid/main amd64 libicu-dev amd64 63.1-5 [9188 kB] Get:125 http://127.0.0.1:9999/debian sid/main amd64 libboost-regex1.67-dev amd64 1.67.0-11 [537 kB] Get:126 http://127.0.0.1:9999/debian sid/main amd64 libboost-iostreams1.67.0 amd64 1.67.0-11 [249 kB] Get:127 http://127.0.0.1:9999/debian sid/main amd64 libboost-iostreams1.67-dev amd64 1.67.0-11 [255 kB] Get:128 http://127.0.0.1:9999/debian sid/main amd64 libboost-iostreams-dev amd64 1.67.0.1 [3632 B] Get:129 http://127.0.0.1:9999/debian sid/main amd64 libboost-math1.67.0 amd64 1.67.0-11 [461 kB] Get:130 http://127.0.0.1:9999/debian sid/main amd64 libboost-math1.67-dev amd64 1.67.0-11 [741 kB] Get:131 http://127.0.0.1:9999/debian sid/main amd64 libboost-math-dev amd64 1.67.0.1 [3848 B] Get:132 http://127.0.0.1:9999/debian sid/main amd64 libevent-2.1-6 amd64 2.1.8-stable-4 [177 kB] Get:133 http://127.0.0.1:9999/debian sid/main amd64 libevent-core-2.1-6 amd64 2.1.8-stable-4 [129 kB] Get:134 http://127.0.0.1:9999/debian sid/main amd64 libevent-pthreads-2.1-6 amd64 2.1.8-stable-4 [47.9 kB] Get:135 http://127.0.0.1:9999/debian sid/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6 [168 kB] Get:136 http://127.0.0.1:9999/debian sid/main amd64 libnuma1 amd64 2.0.12-1 [26.2 kB] Get:137 http://127.0.0.1:9999/debian sid/main amd64 libpsm2-2 amd64 11.2.68-4 [177 kB] Get:138 http://127.0.0.1:9999/debian sid/main amd64 librdmacm1 amd64 21.0-1 [65.0 kB] Get:139 http://127.0.0.1:9999/debian sid/main amd64 libfabric1 amd64 1.6.1-5 [392 kB] Get:140 http://127.0.0.1:9999/debian sid/main amd64 libltdl7 amd64 2.4.6-6 [390 kB] Get:141 http://127.0.0.1:9999/debian sid/main amd64 libhwloc5 amd64 1.11.12-1 [111 kB] Get:142 http://127.0.0.1:9999/debian sid/main amd64 libpciaccess0 amd64 0.14-1 [53.5 kB] Get:143 http://127.0.0.1:9999/debian sid/main amd64 ocl-icd-libopencl1 amd64 2.2.12-2 [37.5 kB] Get:144 http://127.0.0.1:9999/debian sid/main amd64 libhwloc-plugins amd64 1.11.12-1 [17.3 kB] Get:145 http://127.0.0.1:9999/debian sid/main amd64 libpmix2 amd64 3.1.0~rc2-3 [421 kB] Get:146 http://127.0.0.1:9999/debian sid/main amd64 libopenmpi3 amd64 3.1.3-9 [2174 kB] Get:147 http://127.0.0.1:9999/debian sid/main amd64 libboost-mpi1.67.0 amd64 1.67.0-11 [272 kB] Get:148 http://127.0.0.1:9999/debian sid/main amd64 openmpi-common all 3.1.3-9 [165 kB] Get:149 http://127.0.0.1:9999/debian sid/main amd64 libnl-3-dev amd64 3.4.0-1 [102 kB] Get:150 http://127.0.0.1:9999/debian sid/main amd64 libnl-route-3-dev amd64 3.4.0-1 [177 kB] Get:151 http://127.0.0.1:9999/debian sid/main amd64 libibverbs-dev amd64 21.0-1 [355 kB] Get:152 http://127.0.0.1:9999/debian sid/main amd64 libnuma-dev amd64 2.0.12-1 [39.2 kB] Get:153 http://127.0.0.1:9999/debian sid/main amd64 libltdl-dev amd64 2.4.6-6 [162 kB] Get:154 http://127.0.0.1:9999/debian sid/main amd64 libhwloc-dev amd64 1.11.12-1 [175 kB] Get:155 http://127.0.0.1:9999/debian sid/main amd64 openmpi-bin amd64 3.1.3-9 [200 kB] Get:156 http://127.0.0.1:9999/debian sid/main amd64 libopenmpi-dev amd64 3.1.3-9 [974 kB] Get:157 http://127.0.0.1:9999/debian sid/main amd64 mpi-default-dev amd64 1.13 [5476 B] Get:158 http://127.0.0.1:9999/debian sid/main amd64 libboost-mpi1.67-dev amd64 1.67.0-11 [381 kB] Get:159 http://127.0.0.1:9999/debian sid/main amd64 libboost-mpi-dev amd64 1.67.0.1 [3732 B] Get:160 http://127.0.0.1:9999/debian sid/main amd64 libboost-program-options1.67.0 amd64 1.67.0-11 [354 kB] Get:161 http://127.0.0.1:9999/debian sid/main amd64 libboost-program-options1.67-dev amd64 1.67.0-11 [383 kB] Get:162 http://127.0.0.1:9999/debian sid/main amd64 libboost-program-options-dev amd64 1.67.0.1 [3656 B] Get:163 http://127.0.0.1:9999/debian sid/main amd64 libboost-serialization-dev amd64 1.67.0.1 [3876 B] Get:164 http://127.0.0.1:9999/debian sid/main amd64 libboost-thread1.67.0 amd64 1.67.0-11 [267 kB] Get:165 http://127.0.0.1:9999/debian sid/main amd64 libboost-thread1.67-dev amd64 1.67.0-11 [269 kB] Get:166 http://127.0.0.1:9999/debian sid/main amd64 libboost-thread-dev amd64 1.67.0.1 [3672 B] Get:167 http://127.0.0.1:9999/debian sid/main amd64 libboost-timer1.67.0 amd64 1.67.0-11 [231 kB] Get:168 http://127.0.0.1:9999/debian sid/main amd64 libboost-timer1.67-dev amd64 1.67.0-11 [230 kB] Get:169 http://127.0.0.1:9999/debian sid/main amd64 libboost-timer-dev amd64 1.67.0.1 [3772 B] Get:170 http://127.0.0.1:9999/debian sid/main amd64 libbtf1 amd64 1:5.4.0+dfsg-1 [22.7 kB] Get:171 http://127.0.0.1:9999/debian sid/main amd64 libcamd2 amd64 1:5.4.0+dfsg-1 [35.0 kB] Get:172 http://127.0.0.1:9999/debian sid/main amd64 libccolamd2 amd64 1:5.4.0+dfsg-1 [36.4 kB] Get:173 http://127.0.0.1:9999/debian sid/main amd64 libcolamd2 amd64 1:5.4.0+dfsg-1 [30.3 kB] Get:174 http://127.0.0.1:9999/debian sid/main amd64 libmetis5 amd64 5.1.0.dfsg-5+b2 [175 kB] Get:175 http://127.0.0.1:9999/debian sid/main amd64 libcholmod3 amd64 1:5.4.0+dfsg-1 [324 kB] Get:176 http://127.0.0.1:9999/debian sid/main amd64 libcombblas1.16.0 amd64 1.6.2-3 [283 kB] Get:177 http://127.0.0.1:9999/debian sid/main amd64 libcxsparse3 amd64 1:5.4.0+dfsg-1 [75.7 kB] Get:178 http://127.0.0.1:9999/debian sid/main amd64 pkg-config amd64 0.29-4+b1 [63.3 kB] Get:179 http://127.0.0.1:9999/debian sid/main amd64 libeigen3-dev all 3.3.7-1 [850 kB] Get:180 http://127.0.0.1:9999/debian sid/main amd64 libexpat1-dev amd64 2.2.6-1 [152 kB] Get:181 http://127.0.0.1:9999/debian sid/main amd64 libfftw3-double3 amd64 3.3.8-2 [733 kB] Get:182 http://127.0.0.1:9999/debian sid/main amd64 libfftw3-long3 amd64 3.3.8-2 [319 kB] Get:183 http://127.0.0.1:9999/debian sid/main amd64 libfftw3-quad3 amd64 3.3.8-2 [558 kB] Get:184 http://127.0.0.1:9999/debian sid/main amd64 libfftw3-single3 amd64 3.3.8-2 [762 kB] Get:185 http://127.0.0.1:9999/debian sid/main amd64 libfftw3-bin amd64 3.3.8-2 [50.7 kB] Get:186 http://127.0.0.1:9999/debian sid/main amd64 libfftw3-dev amd64 3.3.8-2 [2106 kB] Get:187 http://127.0.0.1:9999/debian sid/main amd64 libfftw3-mpi3 amd64 3.3.8-2 [66.4 kB] Get:188 http://127.0.0.1:9999/debian sid/main amd64 libfftw3-mpi-dev amd64 3.3.8-2 [66.6 kB] Get:189 http://127.0.0.1:9999/debian sid/main amd64 libgraphblas2 amd64 1:5.4.0+dfsg-1 [1664 kB] Get:190 http://127.0.0.1:9999/debian sid/main amd64 libhdf5-openmpi-103 amd64 1.10.4+repack-8 [1370 kB] Get:191 http://127.0.0.1:9999/debian sid/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-1 [214 kB] Get:192 http://127.0.0.1:9999/debian sid/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB] Get:193 http://127.0.0.1:9999/debian sid/main amd64 libjpeg62-turbo-dev amd64 1:1.5.2-2+b1 [208 kB] Get:194 http://127.0.0.1:9999/debian sid/main amd64 libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get:195 http://127.0.0.1:9999/debian sid/main amd64 libhdf5-openmpi-dev amd64 1.10.4+repack-8 [2509 kB] Get:196 http://127.0.0.1:9999/debian sid/main amd64 libhdf5-mpi-dev amd64 1.10.4+repack-8 [27.2 kB] Get:197 http://127.0.0.1:9999/debian sid/main amd64 libsuperlu-dist6 amd64 6.1.0+dfsg1-1 [404 kB] Get:198 http://127.0.0.1:9999/debian sid/main amd64 libsuperlu5 amd64 5.2.1+dfsg1-3 [164 kB] Get:199 http://127.0.0.1:9999/debian sid/main amd64 libhypre-2.15.1 amd64 2.15.1-4 [1822 kB] Get:200 http://127.0.0.1:9999/debian sid/main amd64 libsuperlu-dev amd64 5.2.1+dfsg1-3 [18.2 kB] Get:201 http://127.0.0.1:9999/debian sid/main amd64 libhypre-dev amd64 2.15.1-4 [171 kB] Get:202 http://127.0.0.1:9999/debian sid/main amd64 libjs-jquery all 3.2.1-1 [154 kB] Get:203 http://127.0.0.1:9999/debian sid/main amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:204 http://127.0.0.1:9999/debian sid/main amd64 libjs-mathjax all 2.7.4+dfsg-1 [5658 kB] Get:205 http://127.0.0.1:9999/debian sid/main amd64 libklu1 amd64 1:5.4.0+dfsg-1 [85.3 kB] Get:206 http://127.0.0.1:9999/debian sid/main amd64 libldl2 amd64 1:5.4.0+dfsg-1 [22.1 kB] Get:207 http://127.0.0.1:9999/debian sid/main amd64 libmongoose2 amd64 1:5.4.0+dfsg-1 [44.7 kB] Get:208 http://127.0.0.1:9999/debian sid/main amd64 mpi-default-bin amd64 1.13 [4672 B] Get:209 http://127.0.0.1:9999/debian sid/main amd64 libscalapack-openmpi2.0 amd64 2.0.2-7+b1 [1466 kB] Get:210 http://127.0.0.1:9999/debian sid/main amd64 libmumps-5.1.2 amd64 5.1.2-4+b2 [1125 kB] Get:211 http://127.0.0.1:9999/debian sid/main amd64 libscalapack-openmpi-dev amd64 2.0.2-7+b1 [12.9 kB] Get:212 http://127.0.0.1:9999/debian sid/main amd64 libscalapack-mpi-dev amd64 2.0.2-7+b1 [8880 B] Get:213 http://127.0.0.1:9999/debian sid/main amd64 libmumps-dev amd64 5.1.2-4+b2 [1004 kB] Get:214 http://127.0.0.1:9999/debian sid/main amd64 libparpack2 amd64 3.6.3-1 [95.7 kB] Get:215 http://127.0.0.1:9999/debian sid/main amd64 libparpack2-dev amd64 3.6.3-1 [103 kB] Get:216 http://127.0.0.1:9999/debian sid/main amd64 libscotch-6.0 amd64 6.0.6-2 [422 kB] Get:217 http://127.0.0.1:9999/debian sid/main amd64 libptscotch-6.0 amd64 6.0.6-2 [660 kB] Get:218 http://127.0.0.1:9999/debian sid/main amd64 libumfpack5 amd64 1:5.4.0+dfsg-1 [243 kB] Get:219 http://127.0.0.1:9999/debian sid/main amd64 libpetsc-real3.10 amd64 3.10.3+dfsg1-3 [4981 kB] Get:220 http://127.0.0.1:9999/debian sid/main amd64 libpetsc3.10-dev-common all 3.10.3+dfsg1-3 [178 kB] Get:221 http://127.0.0.1:9999/debian sid/main amd64 librbio2 amd64 1:5.4.0+dfsg-1 [37.8 kB] Get:222 http://127.0.0.1:9999/debian sid/main amd64 libspqr2 amd64 1:5.4.0+dfsg-1 [78.6 kB] Get:223 http://127.0.0.1:9999/debian sid/main amd64 libsuitesparse-dev amd64 1:5.4.0+dfsg-1 [2448 kB] Get:224 http://127.0.0.1:9999/debian sid/main amd64 libscotch-dev amd64 6.0.6-2 [2941 kB] Get:225 http://127.0.0.1:9999/debian sid/main amd64 libptscotch-dev amd64 6.0.6-2 [6547 kB] Get:226 http://127.0.0.1:9999/debian sid/main amd64 libssl-dev amd64 1.1.1a-1 [1788 kB] Get:227 http://127.0.0.1:9999/debian sid/main amd64 libsuperlu-dist-dev amd64 6.1.0+dfsg1-1 [251 kB] Get:228 http://127.0.0.1:9999/debian sid/main amd64 libpetsc-real3.10-dev amd64 3.10.3+dfsg1-3 [5833 kB] Get:229 http://127.0.0.1:9999/debian sid/main amd64 libpython3.7 amd64 3.7.2-1 [1494 kB] Get:230 http://127.0.0.1:9999/debian sid/main amd64 libpython3.7-dev amd64 3.7.2-1 [48.4 MB] Get:231 http://127.0.0.1:9999/debian sid/main amd64 libpython3-dev amd64 3.7.1-3 [20.1 kB] Get:232 http://127.0.0.1:9999/debian sid/main amd64 libpython3-all-dev amd64 3.7.1-3 [1068 B] Get:233 http://127.0.0.1:9999/debian sid/main amd64 libslepc-real3.10 amd64 3.10.1+dfsg1-3 [888 kB] Get:234 http://127.0.0.1:9999/debian sid/main amd64 libslepc-real3.10-dev amd64 3.10.1+dfsg1-3 [4226 kB] Get:235 http://127.0.0.1:9999/debian sid/main amd64 libxml2-dev amd64 2.9.4+dfsg1-7+b3 [783 kB] Get:236 http://127.0.0.1:9999/debian sid/main amd64 petsc-dev all 3.10.3+dfsg1-3 [24.7 kB] Get:237 http://127.0.0.1:9999/debian sid/main amd64 pybind11-dev all 2.2.4-2 [130 kB] Get:238 http://127.0.0.1:9999/debian sid/main amd64 python3-all amd64 3.7.1-3 [1064 B] Get:239 http://127.0.0.1:9999/debian sid/main amd64 python3.7-dev amd64 3.7.2-1 [509 kB] Get:240 http://127.0.0.1:9999/debian sid/main amd64 python3-dev amd64 3.7.1-3 [1260 B] Get:241 http://127.0.0.1:9999/debian sid/main amd64 python3-all-dev amd64 3.7.1-3 [1068 B] Get:242 http://127.0.0.1:9999/debian sid/main amd64 python3-pkg-resources all 40.6.2-1 [152 kB] Get:243 http://127.0.0.1:9999/debian sid/main amd64 python3-numpy amd64 1:1.16.0~rc2-1 [2119 kB] Get:244 http://127.0.0.1:9999/debian sid/main amd64 python3-mpi4py amd64 2.0.0-3+b2 [640 kB] Get:245 http://127.0.0.1:9999/debian sid/main amd64 python3-dijitso all 2018.1.0-5 [24.6 kB] Get:246 http://127.0.0.1:9999/debian sid/main amd64 python3-mpmath all 1.1.0-1 [416 kB] Get:247 http://127.0.0.1:9999/debian sid/main amd64 python3-sympy all 1.3-1 [3500 kB] Get:248 http://127.0.0.1:9999/debian sid/main amd64 python3-fiat all 2018.1.0-4 [55.7 kB] Get:249 http://127.0.0.1:9999/debian sid/main amd64 python3-ufl all 2018.1.0-3 [161 kB] Get:250 http://127.0.0.1:9999/debian sid/main amd64 python3-ffc all 2018.1.0-4 [233 kB] Get:251 http://127.0.0.1:9999/debian sid/main amd64 swig3.0 amd64 3.0.12-1.2 [1397 kB] Get:252 http://127.0.0.1:9999/debian sid/main amd64 swig amd64 3.0.12-1.2 [310 kB] Get:253 http://127.0.0.1:9999/debian sid/main amd64 python3-petsc4py-real amd64 3.10.0-5 [832 kB] Get:254 http://127.0.0.1:9999/debian sid/main amd64 python3-petsc4py all 3.10.0-5 [9244 B] Get:255 http://127.0.0.1:9999/debian sid/main amd64 python3-ply all 3.11-3 [65.1 kB] Get:256 http://127.0.0.1:9999/debian sid/main amd64 python3-setuptools all 40.6.2-1 [303 kB] Get:257 http://127.0.0.1:9999/debian sid/main amd64 python3-slepc4py-real amd64 3.10.0-2 [218 kB] Get:258 http://127.0.0.1:9999/debian sid/main amd64 python3-slepc4py all 3.10.0-2 [5228 B] Get:259 http://127.0.0.1:9999/debian sid/main amd64 slepc-dev all 3.10.1+dfsg1-3 [12.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 207 MB in 4s (57.6 MB/s) Selecting previously unselected package bsdmainutils. (Reading database ... 12592 files and directories currently installed.) Preparing to unpack .../00-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-2_amd64.deb ... Unpacking groff-base (1.22.4-2) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.0-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.0-2) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.8.5-1_amd64.deb ... Unpacking man-db (2.8.5-1) ... Selecting previously unselected package libpython2.7-minimal:amd64. Preparing to unpack .../05-libpython2.7-minimal_2.7.15-5_amd64.deb ... Unpacking libpython2.7-minimal:amd64 (2.7.15-5) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../06-python2.7-minimal_2.7.15-5_amd64.deb ... Unpacking python2.7-minimal (2.7.15-5) ... Selecting previously unselected package python2-minimal. Preparing to unpack .../07-python2-minimal_2.7.15-3_amd64.deb ... Unpacking python2-minimal (2.7.15-3) ... Selecting previously unselected package python-minimal. Preparing to unpack .../08-python-minimal_2.7.15-3_amd64.deb ... Unpacking python-minimal (2.7.15-3) ... Selecting previously unselected package mime-support. Preparing to unpack .../09-mime-support_3.61_all.deb ... Unpacking mime-support (3.61) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../10-libexpat1_2.2.6-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.6-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../11-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../12-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../13-libsqlite3-0_3.26.0+fossilbc891ac6b-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.26.0+fossilbc891ac6b-1) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../14-libssl1.1_1.1.1a-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1a-1) ... Selecting previously unselected package libpython2.7-stdlib:amd64. Preparing to unpack .../15-libpython2.7-stdlib_2.7.15-5_amd64.deb ... Unpacking libpython2.7-stdlib:amd64 (2.7.15-5) ... Selecting previously unselected package python2.7. Preparing to unpack .../16-python2.7_2.7.15-5_amd64.deb ... Unpacking python2.7 (2.7.15-5) ... Selecting previously unselected package libpython2-stdlib:amd64. Preparing to unpack .../17-libpython2-stdlib_2.7.15-3_amd64.deb ... Unpacking libpython2-stdlib:amd64 (2.7.15-3) ... Selecting previously unselected package libpython-stdlib:amd64. Preparing to unpack .../18-libpython-stdlib_2.7.15-3_amd64.deb ... Unpacking libpython-stdlib:amd64 (2.7.15-3) ... Setting up libpython2.7-minimal:amd64 (2.7.15-5) ... Setting up python2.7-minimal (2.7.15-5) ... Setting up python2-minimal (2.7.15-3) ... Selecting previously unselected package python2. (Reading database ... 14057 files and directories currently installed.) Preparing to unpack .../python2_2.7.15-3_amd64.deb ... Unpacking python2 (2.7.15-3) ... Setting up python-minimal (2.7.15-3) ... Selecting previously unselected package python. (Reading database ... 14090 files and directories currently installed.) Preparing to unpack .../python_2.7.15-3_amd64.deb ... Unpacking python (2.7.15-3) ... Selecting previously unselected package libpython3.7-minimal:amd64. Preparing to unpack .../libpython3.7-minimal_3.7.2-1_amd64.deb ... Unpacking libpython3.7-minimal:amd64 (3.7.2-1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../python3.7-minimal_3.7.2-1_amd64.deb ... Unpacking python3.7-minimal (3.7.2-1) ... Setting up libssl1.1:amd64 (1.1.1a-1) ... Setting up libpython3.7-minimal:amd64 (3.7.2-1) ... Setting up libexpat1:amd64 (2.2.6-1) ... Setting up python3.7-minimal (3.7.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 14344 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.7.1-3_amd64.deb ... Unpacking python3-minimal (3.7.1-3) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../libmpdec2_2.4.2-2_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.2-2) ... Selecting previously unselected package libpython3.7-stdlib:amd64. Preparing to unpack .../libpython3.7-stdlib_3.7.2-1_amd64.deb ... Unpacking libpython3.7-stdlib:amd64 (3.7.2-1) ... Selecting previously unselected package python3.7. Preparing to unpack .../python3.7_3.7.2-1_amd64.deb ... Unpacking python3.7 (3.7.2-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../libpython3-stdlib_3.7.1-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.7.1-3) ... Setting up python3-minimal (3.7.1-3) ... Selecting previously unselected package python3. (Reading database ... 14753 files and directories currently installed.) Preparing to unpack .../000-python3_3.7.1-3_amd64.deb ... Unpacking python3 (3.7.1-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../001-libncurses6_6.1+20181013-1_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-1) ... Selecting previously unselected package libprocps7:amd64. Preparing to unpack .../002-libprocps7_2%3a3.3.15-2_amd64.deb ... Unpacking libprocps7:amd64 (2:3.3.15-2) ... Selecting previously unselected package lsb-base. Preparing to unpack .../003-lsb-base_10.2018112800_all.deb ... Unpacking lsb-base (10.2018112800) ... Selecting previously unselected package procps. Preparing to unpack .../004-procps_2%3a3.3.15-2_amd64.deb ... Unpacking procps (2:3.3.15-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.34-2_amd64.deb ... Unpacking libmagic-mgc (1:5.34-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../007-libmagic1_1%3a5.34-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.34-2) ... Selecting previously unselected package file. Preparing to unpack .../008-file_1%3a5.34-2_amd64.deb ... Unpacking file (1:5.34-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../009-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../010-libkeyutils1_1.5.9-9.3_amd64.deb ... Unpacking libkeyutils1:amd64 (1.5.9-9.3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../011-libkrb5support0_1.16.2-1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.16.2-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../012-libk5crypto3_1.16.2-1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.16.2-1) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../013-libkrb5-3_1.16.2-1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.16.2-1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../014-libgssapi-krb5-2_1.16.2-1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.16.2-1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../015-openssh-client_1%3a7.9p1-4_amd64.deb ... Unpacking openssh-client (1:7.9p1-4) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../016-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../017-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../018-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../019-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../020-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../021-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package chrpath. Preparing to unpack .../022-chrpath_0.16-2+b1_amd64.deb ... Unpacking chrpath (0.16-2+b1) ... Selecting previously unselected package cmake-data. Preparing to unpack .../023-cmake-data_3.13.2-1_all.deb ... Unpacking cmake-data (3.13.2-1) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../024-libicu63_63.1-5_amd64.deb ... Unpacking libicu63:amd64 (63.1-5) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../025-libxml2_2.9.4+dfsg1-7+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libarchive13:amd64. Preparing to unpack .../026-libarchive13_3.3.3-3_amd64.deb ... Unpacking libarchive13:amd64 (3.3.3-3) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../027-libsasl2-modules-db_2.1.27~rc8-1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27~rc8-1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../028-libsasl2-2_2.1.27~rc8-1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27~rc8-1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../029-libldap-common_2.4.47+dfsg-1_all.deb ... Unpacking libldap-common (2.4.47+dfsg-1) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../030-libldap-2.4-2_2.4.47+dfsg-1_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.47+dfsg-1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../031-libnghttp2-14_1.35.1-1+b1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.35.1-1+b1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../032-libpsl5_0.20.2-2_amd64.deb ... Unpacking libpsl5:amd64 (0.20.2-2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../033-librtmp1_2.4+20151223.gitfa8646d.1-2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../034-libssh2-1_1.8.0-2_amd64.deb ... Unpacking libssh2-1:amd64 (1.8.0-2) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../035-libcurl4_7.62.0-1_amd64.deb ... Unpacking libcurl4:amd64 (7.62.0-1) ... Selecting previously unselected package libjsoncpp1:amd64. Preparing to unpack .../036-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package librhash0:amd64. Preparing to unpack .../037-librhash0_1.3.7-1_amd64.deb ... Unpacking librhash0:amd64 (1.3.7-1) ... Selecting previously unselected package libuv1:amd64. Preparing to unpack .../038-libuv1_1.24.0-1_amd64.deb ... Unpacking libuv1:amd64 (1.24.0-1) ... Selecting previously unselected package cmake. Preparing to unpack .../039-cmake_3.13.2-1_amd64.deb ... Unpacking cmake (3.13.2-1) ... Selecting previously unselected package libtool. Preparing to unpack .../040-libtool_2.4.6-6_all.deb ... Unpacking libtool (2.4.6-6) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../041-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../042-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../043-libfile-stripnondeterminism-perl_1.0.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.0.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../044-dh-strip-nondeterminism_1.0.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.0.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../045-libelf1_0.175-2_amd64.deb ... Unpacking libelf1:amd64 (0.175-2) ... Selecting previously unselected package dwz. Preparing to unpack .../046-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../047-libglib2.0-0_2.58.2-3_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.2-3) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../048-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package gettext. Preparing to unpack .../049-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../050-intltool-debian_0.35.0+20060710.4_all.deb ... Unpacking intltool-debian (0.35.0+20060710.4) ... Selecting previously unselected package po-debconf. Preparing to unpack .../051-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../052-debhelper_12_all.deb ... Unpacking debhelper (12) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../053-python3-lib2to3_3.7.2-2_all.deb ... Unpacking python3-lib2to3 (3.7.2-2) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../054-python3-distutils_3.7.2-2_all.deb ... Unpacking python3-distutils (3.7.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../055-dh-python_3.20180927_all.deb ... Unpacking dh-python (3.20180927) ... Selecting previously unselected package fonts-mathjax. Preparing to unpack .../056-fonts-mathjax_2.7.4+dfsg-1_all.deb ... Unpacking fonts-mathjax (2.7.4+dfsg-1) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../057-libgfortran5_8.2.0-14_amd64.deb ... Unpacking libgfortran5:amd64 (8.2.0-14) ... Selecting previously unselected package libgfortran-8-dev:amd64. Preparing to unpack .../058-libgfortran-8-dev_8.2.0-14_amd64.deb ... Unpacking libgfortran-8-dev:amd64 (8.2.0-14) ... Selecting previously unselected package gfortran-8. Preparing to unpack .../059-gfortran-8_8.2.0-14_amd64.deb ... Unpacking gfortran-8 (8.2.0-14) ... Selecting previously unselected package gfortran. Preparing to unpack .../060-gfortran_4%3a8.2.0-2_amd64.deb ... Unpacking gfortran (4:8.2.0-2) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../061-libnl-3-200_3.4.0-1_amd64.deb ... Unpacking libnl-3-200:amd64 (3.4.0-1) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../062-libnl-route-3-200_3.4.0-1_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.4.0-1) ... Selecting previously unselected package libibverbs1:amd64. Preparing to unpack .../063-libibverbs1_21.0-1_amd64.deb ... Unpacking libibverbs1:amd64 (21.0-1) ... Selecting previously unselected package ibverbs-providers:amd64. Preparing to unpack .../064-ibverbs-providers_21.0-1_amd64.deb ... Unpacking ibverbs-providers:amd64 (21.0-1) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../065-icu-devtools_63.1-5_amd64.deb ... Unpacking icu-devtools (63.1-5) ... Selecting previously unselected package libaec0:amd64. Preparing to unpack .../066-libaec0_1.0.2-1_amd64.deb ... Unpacking libaec0:amd64 (1.0.2-1) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../067-libsz2_1.0.2-1_amd64.deb ... Unpacking libsz2:amd64 (1.0.2-1) ... Selecting previously unselected package libaec-dev:amd64. Preparing to unpack .../068-libaec-dev_1.0.2-1_amd64.deb ... Unpacking libaec-dev:amd64 (1.0.2-1) ... Selecting previously unselected package libsuitesparseconfig5:amd64. Preparing to unpack .../069-libsuitesparseconfig5_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libsuitesparseconfig5:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libamd2:amd64. Preparing to unpack .../070-libamd2_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libamd2:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../071-libblas3_3.8.0-2_amd64.deb ... Unpacking libblas3:amd64 (3.8.0-2) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../072-liblapack3_3.8.0-2_amd64.deb ... Unpacking liblapack3:amd64 (3.8.0-2) ... Selecting previously unselected package libarpack2:amd64. Preparing to unpack .../073-libarpack2_3.6.3-1_amd64.deb ... Unpacking libarpack2:amd64 (3.6.3-1) ... Selecting previously unselected package libblas-dev:amd64. Preparing to unpack .../074-libblas-dev_3.8.0-2_amd64.deb ... Unpacking libblas-dev:amd64 (3.8.0-2) ... Selecting previously unselected package liblapack-dev:amd64. Preparing to unpack .../075-liblapack-dev_3.8.0-2_amd64.deb ... Unpacking liblapack-dev:amd64 (3.8.0-2) ... Selecting previously unselected package libarpack2-dev:amd64. Preparing to unpack .../076-libarpack2-dev_3.6.3-1_amd64.deb ... Unpacking libarpack2-dev:amd64 (3.6.3-1) ... Selecting previously unselected package libboost1.67-dev:amd64. Preparing to unpack .../077-libboost1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-atomic1.67.0:amd64. Preparing to unpack .../078-libboost-atomic1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-atomic1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-atomic1.67-dev:amd64. Preparing to unpack .../079-libboost-atomic1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-atomic1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-system1.67.0:amd64. Preparing to unpack .../080-libboost-system1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-system1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-chrono1.67.0:amd64. Preparing to unpack .../081-libboost-chrono1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-chrono1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-chrono1.67-dev:amd64. Preparing to unpack .../082-libboost-chrono1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-chrono1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-chrono-dev:amd64. Preparing to unpack .../083-libboost-chrono-dev_1.67.0.1_amd64.deb ... Unpacking libboost-chrono-dev:amd64 (1.67.0.1) ... Selecting previously unselected package libboost-date-time1.67.0:amd64. Preparing to unpack .../084-libboost-date-time1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-date-time1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-serialization1.67.0:amd64. Preparing to unpack .../085-libboost-serialization1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-serialization1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-serialization1.67-dev:amd64. Preparing to unpack .../086-libboost-serialization1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-serialization1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-date-time1.67-dev:amd64. Preparing to unpack .../087-libboost-date-time1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-date-time1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-dev:amd64. Preparing to unpack .../088-libboost-dev_1.67.0.1_amd64.deb ... Unpacking libboost-dev:amd64 (1.67.0.1) ... Selecting previously unselected package libboost-filesystem1.67.0:amd64. Preparing to unpack .../089-libboost-filesystem1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-filesystem1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-system1.67-dev:amd64. Preparing to unpack .../090-libboost-system1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-system1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-filesystem1.67-dev:amd64. Preparing to unpack .../091-libboost-filesystem1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-filesystem1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-filesystem-dev:amd64. Preparing to unpack .../092-libboost-filesystem-dev_1.67.0.1_amd64.deb ... Unpacking libboost-filesystem-dev:amd64 (1.67.0.1) ... Selecting previously unselected package libboost-regex1.67.0:amd64. Preparing to unpack .../093-libboost-regex1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-regex1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libicu-dev. Preparing to unpack .../094-libicu-dev_63.1-5_amd64.deb ... Unpacking libicu-dev (63.1-5) ... Selecting previously unselected package libboost-regex1.67-dev:amd64. Preparing to unpack .../095-libboost-regex1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-regex1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-iostreams1.67.0:amd64. Preparing to unpack .../096-libboost-iostreams1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-iostreams1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-iostreams1.67-dev:amd64. Preparing to unpack .../097-libboost-iostreams1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-iostreams1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-iostreams-dev:amd64. Preparing to unpack .../098-libboost-iostreams-dev_1.67.0.1_amd64.deb ... Unpacking libboost-iostreams-dev:amd64 (1.67.0.1) ... Selecting previously unselected package libboost-math1.67.0:amd64. Preparing to unpack .../099-libboost-math1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-math1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-math1.67-dev:amd64. Preparing to unpack .../100-libboost-math1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-math1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-math-dev:amd64. Preparing to unpack .../101-libboost-math-dev_1.67.0.1_amd64.deb ... Unpacking libboost-math-dev:amd64 (1.67.0.1) ... Selecting previously unselected package libevent-2.1-6:amd64. Preparing to unpack .../102-libevent-2.1-6_2.1.8-stable-4_amd64.deb ... Unpacking libevent-2.1-6:amd64 (2.1.8-stable-4) ... Selecting previously unselected package libevent-core-2.1-6:amd64. Preparing to unpack .../103-libevent-core-2.1-6_2.1.8-stable-4_amd64.deb ... Unpacking libevent-core-2.1-6:amd64 (2.1.8-stable-4) ... Selecting previously unselected package libevent-pthreads-2.1-6:amd64. Preparing to unpack .../104-libevent-pthreads-2.1-6_2.1.8-stable-4_amd64.deb ... Unpacking libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../105-libpsm-infinipath1_3.3+20.604758e7-6_amd64.deb ... Unpacking libpsm-infinipath1 (3.3+20.604758e7-6) ... Selecting previously unselected package libnuma1:amd64. Preparing to unpack .../106-libnuma1_2.0.12-1_amd64.deb ... Unpacking libnuma1:amd64 (2.0.12-1) ... Selecting previously unselected package libpsm2-2. Preparing to unpack .../107-libpsm2-2_11.2.68-4_amd64.deb ... Unpacking libpsm2-2 (11.2.68-4) ... Selecting previously unselected package librdmacm1:amd64. Preparing to unpack .../108-librdmacm1_21.0-1_amd64.deb ... Unpacking librdmacm1:amd64 (21.0-1) ... Selecting previously unselected package libfabric1. Preparing to unpack .../109-libfabric1_1.6.1-5_amd64.deb ... Unpacking libfabric1 (1.6.1-5) ... Selecting previously unselected package libltdl7:amd64. Preparing to unpack .../110-libltdl7_2.4.6-6_amd64.deb ... Unpacking libltdl7:amd64 (2.4.6-6) ... Selecting previously unselected package libhwloc5:amd64. Preparing to unpack .../111-libhwloc5_1.11.12-1_amd64.deb ... Unpacking libhwloc5:amd64 (1.11.12-1) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../112-libpciaccess0_0.14-1_amd64.deb ... Unpacking libpciaccess0:amd64 (0.14-1) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../113-ocl-icd-libopencl1_2.2.12-2_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.2.12-2) ... Selecting previously unselected package libhwloc-plugins:amd64. Preparing to unpack .../114-libhwloc-plugins_1.11.12-1_amd64.deb ... Unpacking libhwloc-plugins:amd64 (1.11.12-1) ... Selecting previously unselected package libpmix2:amd64. Preparing to unpack .../115-libpmix2_3.1.0~rc2-3_amd64.deb ... Unpacking libpmix2:amd64 (3.1.0~rc2-3) ... Selecting previously unselected package libopenmpi3:amd64. Preparing to unpack .../116-libopenmpi3_3.1.3-9_amd64.deb ... Unpacking libopenmpi3:amd64 (3.1.3-9) ... Selecting previously unselected package libboost-mpi1.67.0. Preparing to unpack .../117-libboost-mpi1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-mpi1.67.0 (1.67.0-11) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../118-openmpi-common_3.1.3-9_all.deb ... Unpacking openmpi-common (3.1.3-9) ... Selecting previously unselected package libnl-3-dev:amd64. Preparing to unpack .../119-libnl-3-dev_3.4.0-1_amd64.deb ... Unpacking libnl-3-dev:amd64 (3.4.0-1) ... Selecting previously unselected package libnl-route-3-dev:amd64. Preparing to unpack .../120-libnl-route-3-dev_3.4.0-1_amd64.deb ... Unpacking libnl-route-3-dev:amd64 (3.4.0-1) ... Selecting previously unselected package libibverbs-dev:amd64. Preparing to unpack .../121-libibverbs-dev_21.0-1_amd64.deb ... Unpacking libibverbs-dev:amd64 (21.0-1) ... Selecting previously unselected package libnuma-dev:amd64. Preparing to unpack .../122-libnuma-dev_2.0.12-1_amd64.deb ... Unpacking libnuma-dev:amd64 (2.0.12-1) ... Selecting previously unselected package libltdl-dev:amd64. Preparing to unpack .../123-libltdl-dev_2.4.6-6_amd64.deb ... Unpacking libltdl-dev:amd64 (2.4.6-6) ... Selecting previously unselected package libhwloc-dev:amd64. Preparing to unpack .../124-libhwloc-dev_1.11.12-1_amd64.deb ... Unpacking libhwloc-dev:amd64 (1.11.12-1) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../125-openmpi-bin_3.1.3-9_amd64.deb ... Unpacking openmpi-bin (3.1.3-9) ... Selecting previously unselected package libopenmpi-dev:amd64. Preparing to unpack .../126-libopenmpi-dev_3.1.3-9_amd64.deb ... Unpacking libopenmpi-dev:amd64 (3.1.3-9) ... Selecting previously unselected package mpi-default-dev. Preparing to unpack .../127-mpi-default-dev_1.13_amd64.deb ... Unpacking mpi-default-dev (1.13) ... Selecting previously unselected package libboost-mpi1.67-dev. Preparing to unpack .../128-libboost-mpi1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-mpi1.67-dev (1.67.0-11) ... Selecting previously unselected package libboost-mpi-dev. Preparing to unpack .../129-libboost-mpi-dev_1.67.0.1_amd64.deb ... Unpacking libboost-mpi-dev (1.67.0.1) ... Selecting previously unselected package libboost-program-options1.67.0:amd64. Preparing to unpack .../130-libboost-program-options1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-program-options1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-program-options1.67-dev:amd64. Preparing to unpack .../131-libboost-program-options1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-program-options1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-program-options-dev:amd64. Preparing to unpack .../132-libboost-program-options-dev_1.67.0.1_amd64.deb ... Unpacking libboost-program-options-dev:amd64 (1.67.0.1) ... Selecting previously unselected package libboost-serialization-dev:amd64. Preparing to unpack .../133-libboost-serialization-dev_1.67.0.1_amd64.deb ... Unpacking libboost-serialization-dev:amd64 (1.67.0.1) ... Selecting previously unselected package libboost-thread1.67.0:amd64. Preparing to unpack .../134-libboost-thread1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-thread1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-thread1.67-dev:amd64. Preparing to unpack .../135-libboost-thread1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-thread1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-thread-dev:amd64. Preparing to unpack .../136-libboost-thread-dev_1.67.0.1_amd64.deb ... Unpacking libboost-thread-dev:amd64 (1.67.0.1) ... Selecting previously unselected package libboost-timer1.67.0:amd64. Preparing to unpack .../137-libboost-timer1.67.0_1.67.0-11_amd64.deb ... Unpacking libboost-timer1.67.0:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-timer1.67-dev:amd64. Preparing to unpack .../138-libboost-timer1.67-dev_1.67.0-11_amd64.deb ... Unpacking libboost-timer1.67-dev:amd64 (1.67.0-11) ... Selecting previously unselected package libboost-timer-dev:amd64. Preparing to unpack .../139-libboost-timer-dev_1.67.0.1_amd64.deb ... Unpacking libboost-timer-dev:amd64 (1.67.0.1) ... Selecting previously unselected package libbtf1:amd64. Preparing to unpack .../140-libbtf1_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libbtf1:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libcamd2:amd64. Preparing to unpack .../141-libcamd2_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libcamd2:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libccolamd2:amd64. Preparing to unpack .../142-libccolamd2_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libccolamd2:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libcolamd2:amd64. Preparing to unpack .../143-libcolamd2_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libcolamd2:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libmetis5:amd64. Preparing to unpack .../144-libmetis5_5.1.0.dfsg-5+b2_amd64.deb ... Unpacking libmetis5:amd64 (5.1.0.dfsg-5+b2) ... Selecting previously unselected package libcholmod3:amd64. Preparing to unpack .../145-libcholmod3_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libcholmod3:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libcombblas1.16.0:amd64. Preparing to unpack .../146-libcombblas1.16.0_1.6.2-3_amd64.deb ... Unpacking libcombblas1.16.0:amd64 (1.6.2-3) ... Selecting previously unselected package libcxsparse3:amd64. Preparing to unpack .../147-libcxsparse3_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libcxsparse3:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package pkg-config. Preparing to unpack .../148-pkg-config_0.29-4+b1_amd64.deb ... Unpacking pkg-config (0.29-4+b1) ... Selecting previously unselected package libeigen3-dev. Preparing to unpack .../149-libeigen3-dev_3.3.7-1_all.deb ... Unpacking libeigen3-dev (3.3.7-1) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../150-libexpat1-dev_2.2.6-1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.2.6-1) ... Selecting previously unselected package libfftw3-double3:amd64. Preparing to unpack .../151-libfftw3-double3_3.3.8-2_amd64.deb ... Unpacking libfftw3-double3:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-long3:amd64. Preparing to unpack .../152-libfftw3-long3_3.3.8-2_amd64.deb ... Unpacking libfftw3-long3:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-quad3:amd64. Preparing to unpack .../153-libfftw3-quad3_3.3.8-2_amd64.deb ... Unpacking libfftw3-quad3:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-single3:amd64. Preparing to unpack .../154-libfftw3-single3_3.3.8-2_amd64.deb ... Unpacking libfftw3-single3:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-bin. Preparing to unpack .../155-libfftw3-bin_3.3.8-2_amd64.deb ... Unpacking libfftw3-bin (3.3.8-2) ... Selecting previously unselected package libfftw3-dev:amd64. Preparing to unpack .../156-libfftw3-dev_3.3.8-2_amd64.deb ... Unpacking libfftw3-dev:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-mpi3:amd64. Preparing to unpack .../157-libfftw3-mpi3_3.3.8-2_amd64.deb ... Unpacking libfftw3-mpi3:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-mpi-dev:amd64. Preparing to unpack .../158-libfftw3-mpi-dev_3.3.8-2_amd64.deb ... Unpacking libfftw3-mpi-dev:amd64 (3.3.8-2) ... Selecting previously unselected package libgraphblas2:amd64. Preparing to unpack .../159-libgraphblas2_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libgraphblas2:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libhdf5-openmpi-103:amd64. Preparing to unpack .../160-libhdf5-openmpi-103_1.10.4+repack-8_amd64.deb ... Unpacking libhdf5-openmpi-103:amd64 (1.10.4+repack-8) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../161-zlib1g-dev_1%3a1.2.11.dfsg-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.2.11.dfsg-1) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../162-libjpeg62-turbo_1%3a1.5.2-2+b1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Selecting previously unselected package libjpeg62-turbo-dev:amd64. Preparing to unpack .../163-libjpeg62-turbo-dev_1%3a1.5.2-2+b1_amd64.deb ... Unpacking libjpeg62-turbo-dev:amd64 (1:1.5.2-2+b1) ... Selecting previously unselected package libjpeg-dev. Preparing to unpack .../164-libjpeg-dev_1%3a1.5.2-2_all.deb ... Unpacking libjpeg-dev (1:1.5.2-2) ... Selecting previously unselected package libhdf5-openmpi-dev. Preparing to unpack .../165-libhdf5-openmpi-dev_1.10.4+repack-8_amd64.deb ... Unpacking libhdf5-openmpi-dev (1.10.4+repack-8) ... Selecting previously unselected package libhdf5-mpi-dev. Preparing to unpack .../166-libhdf5-mpi-dev_1.10.4+repack-8_amd64.deb ... Unpacking libhdf5-mpi-dev (1.10.4+repack-8) ... Selecting previously unselected package libsuperlu-dist6:amd64. Preparing to unpack .../167-libsuperlu-dist6_6.1.0+dfsg1-1_amd64.deb ... Unpacking libsuperlu-dist6:amd64 (6.1.0+dfsg1-1) ... Selecting previously unselected package libsuperlu5:amd64. Preparing to unpack .../168-libsuperlu5_5.2.1+dfsg1-3_amd64.deb ... Unpacking libsuperlu5:amd64 (5.2.1+dfsg1-3) ... Selecting previously unselected package libhypre-2.15.1:amd64. Preparing to unpack .../169-libhypre-2.15.1_2.15.1-4_amd64.deb ... Unpacking libhypre-2.15.1:amd64 (2.15.1-4) ... Selecting previously unselected package libsuperlu-dev:amd64. Preparing to unpack .../170-libsuperlu-dev_5.2.1+dfsg1-3_amd64.deb ... Unpacking libsuperlu-dev:amd64 (5.2.1+dfsg1-3) ... Selecting previously unselected package libhypre-dev:amd64. Preparing to unpack .../171-libhypre-dev_2.15.1-4_amd64.deb ... Unpacking libhypre-dev:amd64 (2.15.1-4) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../172-libjs-jquery_3.2.1-1_all.deb ... Unpacking libjs-jquery (3.2.1-1) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../173-libjs-jquery-ui_1.12.1+dfsg-5_all.deb ... Unpacking libjs-jquery-ui (1.12.1+dfsg-5) ... Selecting previously unselected package libjs-mathjax. Preparing to unpack .../174-libjs-mathjax_2.7.4+dfsg-1_all.deb ... Unpacking libjs-mathjax (2.7.4+dfsg-1) ... Selecting previously unselected package libklu1:amd64. Preparing to unpack .../175-libklu1_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libklu1:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libldl2:amd64. Preparing to unpack .../176-libldl2_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libldl2:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libmongoose2:amd64. Preparing to unpack .../177-libmongoose2_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libmongoose2:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package mpi-default-bin. Preparing to unpack .../178-mpi-default-bin_1.13_amd64.deb ... Unpacking mpi-default-bin (1.13) ... Selecting previously unselected package libscalapack-openmpi2.0. Preparing to unpack .../179-libscalapack-openmpi2.0_2.0.2-7+b1_amd64.deb ... Unpacking libscalapack-openmpi2.0 (2.0.2-7+b1) ... Selecting previously unselected package libmumps-5.1.2:amd64. Preparing to unpack .../180-libmumps-5.1.2_5.1.2-4+b2_amd64.deb ... Unpacking libmumps-5.1.2:amd64 (5.1.2-4+b2) ... Selecting previously unselected package libscalapack-openmpi-dev. Preparing to unpack .../181-libscalapack-openmpi-dev_2.0.2-7+b1_amd64.deb ... Unpacking libscalapack-openmpi-dev (2.0.2-7+b1) ... Selecting previously unselected package libscalapack-mpi-dev. Preparing to unpack .../182-libscalapack-mpi-dev_2.0.2-7+b1_amd64.deb ... Unpacking libscalapack-mpi-dev (2.0.2-7+b1) ... Selecting previously unselected package libmumps-dev:amd64. Preparing to unpack .../183-libmumps-dev_5.1.2-4+b2_amd64.deb ... Unpacking libmumps-dev:amd64 (5.1.2-4+b2) ... Selecting previously unselected package libparpack2:amd64. Preparing to unpack .../184-libparpack2_3.6.3-1_amd64.deb ... Unpacking libparpack2:amd64 (3.6.3-1) ... Selecting previously unselected package libparpack2-dev:amd64. Preparing to unpack .../185-libparpack2-dev_3.6.3-1_amd64.deb ... Unpacking libparpack2-dev:amd64 (3.6.3-1) ... Selecting previously unselected package libscotch-6.0. Preparing to unpack .../186-libscotch-6.0_6.0.6-2_amd64.deb ... Unpacking libscotch-6.0 (6.0.6-2) ... Selecting previously unselected package libptscotch-6.0. Preparing to unpack .../187-libptscotch-6.0_6.0.6-2_amd64.deb ... Unpacking libptscotch-6.0 (6.0.6-2) ... Selecting previously unselected package libumfpack5:amd64. Preparing to unpack .../188-libumfpack5_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libumfpack5:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libpetsc-real3.10:amd64. Preparing to unpack .../189-libpetsc-real3.10_3.10.3+dfsg1-3_amd64.deb ... Unpacking libpetsc-real3.10:amd64 (3.10.3+dfsg1-3) ... Selecting previously unselected package libpetsc3.10-dev-common. Preparing to unpack .../190-libpetsc3.10-dev-common_3.10.3+dfsg1-3_all.deb ... Unpacking libpetsc3.10-dev-common (3.10.3+dfsg1-3) ... Selecting previously unselected package librbio2:amd64. Preparing to unpack .../191-librbio2_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking librbio2:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libspqr2:amd64. Preparing to unpack .../192-libspqr2_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libspqr2:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libsuitesparse-dev:amd64. Preparing to unpack .../193-libsuitesparse-dev_1%3a5.4.0+dfsg-1_amd64.deb ... Unpacking libsuitesparse-dev:amd64 (1:5.4.0+dfsg-1) ... Selecting previously unselected package libscotch-dev. Preparing to unpack .../194-libscotch-dev_6.0.6-2_amd64.deb ... Unpacking libscotch-dev (6.0.6-2) ... Selecting previously unselected package libptscotch-dev. Preparing to unpack .../195-libptscotch-dev_6.0.6-2_amd64.deb ... Unpacking libptscotch-dev (6.0.6-2) ... Selecting previously unselected package libssl-dev:amd64. Preparing to unpack .../196-libssl-dev_1.1.1a-1_amd64.deb ... Unpacking libssl-dev:amd64 (1.1.1a-1) ... Selecting previously unselected package libsuperlu-dist-dev:amd64. Preparing to unpack .../197-libsuperlu-dist-dev_6.1.0+dfsg1-1_amd64.deb ... Unpacking libsuperlu-dist-dev:amd64 (6.1.0+dfsg1-1) ... Selecting previously unselected package libpetsc-real3.10-dev:amd64. Preparing to unpack .../198-libpetsc-real3.10-dev_3.10.3+dfsg1-3_amd64.deb ... Unpacking libpetsc-real3.10-dev:amd64 (3.10.3+dfsg1-3) ... Selecting previously unselected package libpython3.7:amd64. Preparing to unpack .../199-libpython3.7_3.7.2-1_amd64.deb ... Unpacking libpython3.7:amd64 (3.7.2-1) ... Selecting previously unselected package libpython3.7-dev:amd64. Preparing to unpack .../200-libpython3.7-dev_3.7.2-1_amd64.deb ... Unpacking libpython3.7-dev:amd64 (3.7.2-1) ... Selecting previously unselected package libpython3-dev:amd64. Preparing to unpack .../201-libpython3-dev_3.7.1-3_amd64.deb ... Unpacking libpython3-dev:amd64 (3.7.1-3) ... Selecting previously unselected package libpython3-all-dev:amd64. Preparing to unpack .../202-libpython3-all-dev_3.7.1-3_amd64.deb ... Unpacking libpython3-all-dev:amd64 (3.7.1-3) ... Selecting previously unselected package libslepc-real3.10. Preparing to unpack .../203-libslepc-real3.10_3.10.1+dfsg1-3_amd64.deb ... Unpacking libslepc-real3.10 (3.10.1+dfsg1-3) ... Selecting previously unselected package libslepc-real3.10-dev. Preparing to unpack .../204-libslepc-real3.10-dev_3.10.1+dfsg1-3_amd64.deb ... Unpacking libslepc-real3.10-dev (3.10.1+dfsg1-3) ... Selecting previously unselected package libxml2-dev:amd64. Preparing to unpack .../205-libxml2-dev_2.9.4+dfsg1-7+b3_amd64.deb ... Unpacking libxml2-dev:amd64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package petsc-dev. Preparing to unpack .../206-petsc-dev_3.10.3+dfsg1-3_all.deb ... Unpacking petsc-dev (3.10.3+dfsg1-3) ... Selecting previously unselected package pybind11-dev. Preparing to unpack .../207-pybind11-dev_2.2.4-2_all.deb ... Unpacking pybind11-dev (2.2.4-2) ... Selecting previously unselected package python3-all. Preparing to unpack .../208-python3-all_3.7.1-3_amd64.deb ... Unpacking python3-all (3.7.1-3) ... Selecting previously unselected package python3.7-dev. Preparing to unpack .../209-python3.7-dev_3.7.2-1_amd64.deb ... Unpacking python3.7-dev (3.7.2-1) ... Selecting previously unselected package python3-dev. Preparing to unpack .../210-python3-dev_3.7.1-3_amd64.deb ... Unpacking python3-dev (3.7.1-3) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../211-python3-all-dev_3.7.1-3_amd64.deb ... Unpacking python3-all-dev (3.7.1-3) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../212-python3-pkg-resources_40.6.2-1_all.deb ... Unpacking python3-pkg-resources (40.6.2-1) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../213-python3-numpy_1%3a1.16.0~rc2-1_amd64.deb ... Unpacking python3-numpy (1:1.16.0~rc2-1) ... Selecting previously unselected package python3-mpi4py. Preparing to unpack .../214-python3-mpi4py_2.0.0-3+b2_amd64.deb ... Unpacking python3-mpi4py (2.0.0-3+b2) ... Selecting previously unselected package python3-dijitso. Preparing to unpack .../215-python3-dijitso_2018.1.0-5_all.deb ... Unpacking python3-dijitso (2018.1.0-5) ... Selecting previously unselected package python3-mpmath. Preparing to unpack .../216-python3-mpmath_1.1.0-1_all.deb ... Unpacking python3-mpmath (1.1.0-1) ... Selecting previously unselected package python3-sympy. Preparing to unpack .../217-python3-sympy_1.3-1_all.deb ... Unpacking python3-sympy (1.3-1) ... Selecting previously unselected package python3-fiat. Preparing to unpack .../218-python3-fiat_2018.1.0-4_all.deb ... Unpacking python3-fiat (2018.1.0-4) ... Selecting previously unselected package python3-ufl. Preparing to unpack .../219-python3-ufl_2018.1.0-3_all.deb ... Unpacking python3-ufl (2018.1.0-3) ... Selecting previously unselected package python3-ffc. Preparing to unpack .../220-python3-ffc_2018.1.0-4_all.deb ... Unpacking python3-ffc (2018.1.0-4) ... Selecting previously unselected package swig3.0. Preparing to unpack .../221-swig3.0_3.0.12-1.2_amd64.deb ... Unpacking swig3.0 (3.0.12-1.2) ... Selecting previously unselected package swig. Preparing to unpack .../222-swig_3.0.12-1.2_amd64.deb ... Unpacking swig (3.0.12-1.2) ... Selecting previously unselected package python3-petsc4py-real. Preparing to unpack .../223-python3-petsc4py-real_3.10.0-5_amd64.deb ... Unpacking python3-petsc4py-real (3.10.0-5) ... Selecting previously unselected package python3-petsc4py. Preparing to unpack .../224-python3-petsc4py_3.10.0-5_all.deb ... Unpacking python3-petsc4py (3.10.0-5) ... Selecting previously unselected package python3-ply. Preparing to unpack .../225-python3-ply_3.11-3_all.deb ... Unpacking python3-ply (3.11-3) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../226-python3-setuptools_40.6.2-1_all.deb ... Unpacking python3-setuptools (40.6.2-1) ... Selecting previously unselected package python3-slepc4py-real. Preparing to unpack .../227-python3-slepc4py-real_3.10.0-2_amd64.deb ... Unpacking python3-slepc4py-real (3.10.0-2) ... Selecting previously unselected package python3-slepc4py. Preparing to unpack .../228-python3-slepc4py_3.10.0-2_all.deb ... Unpacking python3-slepc4py (3.10.0-2) ... Selecting previously unselected package slepc-dev. Preparing to unpack .../229-slepc-dev_3.10.1+dfsg1-3_all.deb ... Unpacking slepc-dev (3.10.1+dfsg1-3) ... Selecting previously unselected package sbuild-build-depends-dolfin-dummy. Preparing to unpack .../230-sbuild-build-depends-dolfin-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-dolfin-dummy (0.invalid.0) ... Setting up chrpath (0.16-2+b1) ... Setting up libjs-jquery (3.2.1-1) ... Setting up readline-common (7.0-5) ... Setting up fonts-mathjax (2.7.4+dfsg-1) ... Setting up libaec0:amd64 (1.0.2-1) ... Setting up libevent-2.1-6:amd64 (2.1.8-stable-4) ... Setting up libboost-iostreams1.67.0:amd64 (1.67.0-11) ... Setting up libevent-core-2.1-6:amd64 (2.1.8-stable-4) ... Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libnghttp2-14:amd64 (1.35.1-1+b1) ... Setting up swig3.0 (3.0.12-1.2) ... Setting up libprocps7:amd64 (2:3.3.15-2) ... Setting up mime-support (3.61) ... Setting up libjs-mathjax (2.7.4+dfsg-1) ... Setting up libicu63:amd64 (63.1-5) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libldap-common (2.4.47+dfsg-1) ... Setting up libuv1:amd64 (1.24.0-1) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libpsl5:amd64 (0.20.2-2) ... Setting up libnuma1:amd64 (2.0.12-1) ... Setting up libelf1:amd64 (0.175-2) ... Setting up libboost-atomic1.67.0:amd64 (1.67.0-11) ... Setting up libssl-dev:amd64 (1.1.1a-1) ... Setting up libglib2.0-0:amd64 (2.58.2-3) ... No schema files found: doing nothing. Setting up libboost-math1.67.0:amd64 (1.67.0-11) ... Setting up gettext-base (0.19.8.1-9) ... Setting up cmake-data (3.13.2-1) ... Setting up libgraphblas2:amd64 (1:5.4.0+dfsg-1) ... Setting up libpipeline1:amd64 (1.5.0-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2) ... Setting up m4 (1.4.18-2) ... Setting up libfftw3-double3:amd64 (3.3.8-2) ... Setting up libboost-program-options1.67.0:amd64 (1.67.0-11) ... Setting up libboost-date-time1.67.0:amd64 (1.67.0-11) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libmagic-mgc (1:5.34-2) ... Setting up libmagic1:amd64 (1:5.34-2) ... Setting up lsb-base (10.2018112800) ... Setting up librhash0:amd64 (1.3.7-1) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libfftw3-quad3:amd64 (3.3.8-2) ... Setting up pkg-config (0.29-4+b1) ... Setting up sensible-utils (0.0.12) ... Setting up libssh2-1:amd64 (1.8.0-2) ... Setting up libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4) ... Setting up openmpi-common (3.1.3-9) ... Processing triggers for libc-bin (2.28-4) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up libboost1.67-dev:amd64 (1.67.0-11) ... Setting up libsuitesparseconfig5:amd64 (1:5.4.0+dfsg-1) ... Setting up libmetis5:amd64 (5.1.0.dfsg-5+b2) ... Setting up pybind11-dev (2.2.4-2) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up libltdl7:amd64 (2.4.6-6) ... Setting up libsqlite3-0:amd64 (3.26.0+fossilbc891ac6b-1) ... Setting up libcolamd2:amd64 (1:5.4.0+dfsg-1) ... Setting up libexpat1-dev:amd64 (2.2.6-1) ... Setting up libpciaccess0:amd64 (0.14-1) ... Setting up libccolamd2:amd64 (1:5.4.0+dfsg-1) ... Setting up libfftw3-single3:amd64 (3.3.8-2) ... Setting up libboost-serialization1.67.0:amd64 (1.67.0-11) ... Setting up icu-devtools (63.1-5) ... Setting up libboost-dev:amd64 (1.67.0.1) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.5.2-2+b1) ... Setting up libnuma-dev:amd64 (2.0.12-1) ... Setting up ocl-icd-libopencl1:amd64 (2.2.12-2) ... Setting up libkeyutils1:amd64 (1.5.9-9.3) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libnl-3-200:amd64 (3.4.0-1) ... Setting up libboost-system1.67.0:amd64 (1.67.0-11) ... Setting up libfftw3-long3:amd64 (3.3.8-2) ... Setting up libmongoose2:amd64 (1:5.4.0+dfsg-1) ... Setting up libgfortran5:amd64 (8.2.0-14) ... Setting up libncurses6:amd64 (6.1+20181013-1) ... Setting up libboost-regex1.67.0:amd64 (1.67.0-11) ... Setting up libpython2.7-stdlib:amd64 (2.7.15-5) ... Setting up autopoint (0.19.8.1-9) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libsz2:amd64 (1.0.2-1) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-1) ... Setting up libfile-stripnondeterminism-perl (1.0.0-1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libbtf1:amd64 (1:5.4.0+dfsg-1) ... Setting up libldl2:amd64 (1:5.4.0+dfsg-1) ... Setting up libcxsparse3:amd64 (1:5.4.0+dfsg-1) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up swig (3.0.12-1.2) ... Setting up libpython3.7-stdlib:amd64 (3.7.2-1) ... Setting up libpsm2-2 (11.2.68-4) ... Setting up gettext (0.19.8.1-9) ... Setting up libboost-serialization1.67-dev:amd64 (1.67.0-11) ... Setting up libboost-math1.67-dev:amd64 (1.67.0-11) ... Setting up libarchive13:amd64 (3.3.3-3) ... Setting up libboost-filesystem1.67.0:amd64 (1.67.0-11) ... Setting up libeigen3-dev (3.3.7-1) ... Setting up groff-base (1.22.4-2) ... Setting up libboost-thread1.67.0:amd64 (1.67.0-11) ... Setting up librbio2:amd64 (1:5.4.0+dfsg-1) ... Setting up libcamd2:amd64 (1:5.4.0+dfsg-1) ... Setting up libnl-3-dev:amd64 (3.4.0-1) ... Setting up libaec-dev:amd64 (1.0.2-1) ... Setting up python2.7 (2.7.15-5) ... Setting up libnl-route-3-200:amd64 (3.4.0-1) ... Setting up python3.7 (3.7.2-1) ... Setting up autoconf (2.69-11) ... Setting up libicu-dev (63.1-5) ... Setting up file (1:5.34-2) ... Setting up libhwloc5:amd64 (1.11.12-1) ... Setting up libkrb5support0:amd64 (1.16.2-1) ... Setting up libxml2-dev:amd64 (2.9.4+dfsg1-7+b3) ... Setting up procps (2:3.3.15-2) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libhwloc-plugins:amd64 (1.11.12-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libboost-program-options1.67-dev:amd64 (1.67.0-11) ... Setting up libamd2:amd64 (1:5.4.0+dfsg-1) ... Setting up libboost-atomic1.67-dev:amd64 (1.67.0-11) ... Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg-dev (1:1.5.2-2) ... Setting up libpython3.7:amd64 (3.7.2-1) ... Setting up libboost-chrono1.67.0:amd64 (1.67.0-11) ... Setting up libfftw3-dev:amd64 (3.3.8-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpython3.7-dev:amd64 (3.7.2-1) ... Setting up libboost-system1.67-dev:amd64 (1.67.0-11) ... Setting up man-db (2.8.5-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2-stdlib:amd64 (2.7.15-3) ... Setting up libboost-chrono1.67-dev:amd64 (1.67.0-11) ... Setting up libboost-date-time1.67-dev:amd64 (1.67.0-11) ... Setting up libgfortran-8-dev:amd64 (8.2.0-14) ... Setting up libboost-math-dev:amd64 (1.67.0.1) ... Setting up libboost-program-options-dev:amd64 (1.67.0.1) ... Setting up libpython3-dev:amd64 (3.7.1-3) ... Setting up libtool (2.4.6-6) ... Setting up libpython3-stdlib:amd64 (3.7.1-3) ... Setting up libibverbs1:amd64 (21.0-1) ... Setting up libboost-serialization-dev:amd64 (1.67.0.1) ... Setting up libboost-filesystem1.67-dev:amd64 (1.67.0-11) ... Setting up libk5crypto3:amd64 (1.16.2-1) ... Setting up libboost-timer1.67.0:amd64 (1.67.0-11) ... Setting up libboost-timer1.67-dev:amd64 (1.67.0-11) ... Setting up libltdl-dev:amd64 (2.4.6-6) ... Setting up po-debconf (1.0.21) ... Setting up python3 (3.7.1-3) ... Setting up libboost-thread1.67-dev:amd64 (1.67.0-11) ... Setting up libhwloc-dev:amd64 (1.11.12-1) ... Setting up libblas-dev:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libboost-chrono-dev:amd64 (1.67.0.1) ... Setting up gfortran-8 (8.2.0-14) ... Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libboost-regex1.67-dev:amd64 (1.67.0-11) ... Setting up libklu1:amd64 (1:5.4.0+dfsg-1) ... Setting up libnl-route-3-dev:amd64 (3.4.0-1) ... Setting up libboost-timer-dev:amd64 (1.67.0.1) ... Setting up libpmix2:amd64 (3.1.0~rc2-3) ... Setting up librdmacm1:amd64 (21.0-1) ... Setting up python3-pkg-resources (40.6.2-1) ... Setting up python3.7-dev (3.7.2-1) ... Setting up libboost-filesystem-dev:amd64 (1.67.0.1) ... Setting up python3-mpmath (1.1.0-1) ... Setting up libsuperlu5:amd64 (5.2.1+dfsg1-3) ... Setting up python2 (2.7.15-3) ... Setting up libcholmod3:amd64 (1:5.4.0+dfsg-1) ... Setting up libpython-stdlib:amd64 (2.7.15-3) ... Setting up libsuperlu-dev:amd64 (5.2.1+dfsg1-3) ... Setting up libpython3-all-dev:amd64 (3.7.1-3) ... Setting up ibverbs-providers:amd64 (21.0-1) ... Setting up libarpack2:amd64 (3.6.3-1) ... Setting up python3-ply (3.11-3) ... Setting up libkrb5-3:amd64 (1.16.2-1) ... Setting up python3-sympy (1.3-1) ... Setting up python3-lib2to3 (3.7.2-2) ... Setting up libibverbs-dev:amd64 (21.0-1) ... Setting up python3-distutils (3.7.2-2) ... Setting up python (2.7.15-3) ... Setting up libspqr2:amd64 (1:5.4.0+dfsg-1) ... Setting up liblapack-dev:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up gfortran (4:8.2.0-2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libboost-thread-dev:amd64 (1.67.0.1) ... Setting up libfabric1 (1.6.1-5) ... Setting up libboost-iostreams1.67-dev:amd64 (1.67.0-11) ... Setting up python3-numpy (1:1.16.0~rc2-1) ... Setting up libumfpack5:amd64 (1:5.4.0+dfsg-1) ... Setting up python3-ufl (2018.1.0-3) ... Setting up libgssapi-krb5-2:amd64 (1.16.2-1) ... Setting up libpetsc3.10-dev-common (3.10.3+dfsg1-3) ... Setting up libboost-iostreams-dev:amd64 (1.67.0.1) ... Setting up libarpack2-dev:amd64 (3.6.3-1) ... Setting up libsuitesparse-dev:amd64 (1:5.4.0+dfsg-1) ... Setting up python3-setuptools (40.6.2-1) ... Setting up openssh-client (1:7.9p1-4) ... Setting up dh-python (3.20180927) ... Setting up python3-fiat (2018.1.0-4) ... Setting up libopenmpi3:amd64 (3.1.3-9) ... Setting up libcombblas1.16.0:amd64 (1.6.2-3) ... Setting up libsasl2-modules-db:amd64 (2.1.27~rc8-1) ... Setting up libsasl2-2:amd64 (2.1.27~rc8-1) ... Setting up libsuperlu-dist6:amd64 (6.1.0+dfsg1-1) ... Setting up libparpack2:amd64 (3.6.3-1) ... Setting up libfftw3-mpi3:amd64 (3.3.8-2) ... Setting up python3-dev (3.7.1-3) ... Setting up openmpi-bin (3.1.3-9) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-1) ... Setting up python3-all (3.7.1-3) ... Setting up libhypre-2.15.1:amd64 (2.15.1-4) ... Setting up libsuperlu-dist-dev:amd64 (6.1.0+dfsg1-1) ... Setting up python3-mpi4py (2.0.0-3+b2) ... Setting up libhdf5-openmpi-103:amd64 (1.10.4+repack-8) ... Setting up libboost-mpi1.67.0 (1.67.0-11) ... Setting up mpi-default-bin (1.13) ... Setting up libscotch-6.0 (6.0.6-2) ... Setting up libfftw3-mpi-dev:amd64 (3.3.8-2) ... Setting up libscalapack-openmpi2.0 (2.0.2-7+b1) ... Setting up python3-all-dev (3.7.1-3) ... Setting up libopenmpi-dev:amd64 (3.1.3-9) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libcurl4:amd64 (7.62.0-1) ... Setting up libptscotch-6.0 (6.0.6-2) ... Setting up python3-dijitso (2018.1.0-5) ... Setting up mpi-default-dev (1.13) ... Setting up libscalapack-openmpi-dev (2.0.2-7+b1) ... Setting up libhdf5-openmpi-dev (1.10.4+repack-8) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libscotch-dev (6.0.6-2) ... Setting up cmake (3.13.2-1) ... Setting up libboost-mpi1.67-dev (1.67.0-11) ... Setting up python3-ffc (2018.1.0-4) ... update-alternatives: using /usr/lib/python3/dist-packages/ffc/backends/ufc/ufc.h to provide /usr/include/ufc.h (ufc.h) in auto mode Setting up libparpack2-dev:amd64 (3.6.3-1) ... Setting up libmumps-5.1.2:amd64 (5.1.2-4+b2) ... Setting up libptscotch-dev (6.0.6-2) ... Setting up libhypre-dev:amd64 (2.15.1-4) ... Setting up libscalapack-mpi-dev (2.0.2-7+b1) ... Setting up libpetsc-real3.10:amd64 (3.10.3+dfsg1-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.10.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.10 (libpetsc.so.3.10) in auto mode Setting up libmumps-dev:amd64 (5.1.2-4+b2) ... Setting up libhdf5-mpi-dev (1.10.4+repack-8) ... Setting up libboost-mpi-dev (1.67.0.1) ... Setting up libslepc-real3.10 (3.10.1+dfsg1-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.10.1 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.10 (libslepc.so.3.10) in auto mode Setting up python3-petsc4py-real (3.10.0-5) ... update-alternatives: using /usr/lib/python3/dist-packages/petsc4py_real to provide /usr/lib/python3/dist-packages/petsc4py (petsc4py) in auto mode Setting up libpetsc-real3.10-dev:amd64 (3.10.3+dfsg1-3) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.10.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.10 (petsc3.10) in auto mode Setting up libslepc-real3.10-dev (3.10.1+dfsg1-3) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.10.1 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.10 (slepc3.10) in auto mode Setting up petsc-dev (3.10.3+dfsg1-3) ... Setting up python3-petsc4py (3.10.0-5) ... Setting up slepc-dev (3.10.1+dfsg1-3) ... Setting up python3-slepc4py-real (3.10.0-2) ... update-alternatives: using /usr/lib/python3/dist-packages/slepc4py_real to provide /usr/lib/python3/dist-packages/slepc4py (slepc4py) in auto mode Setting up python3-slepc4py (3.10.0-2) ... Setting up debhelper (12) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.0.0-1) ... Setting up sbuild-build-depends-dolfin-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-4) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-11 dpkg-dev_1.19.2 g++-8_8.2.0-14 gcc-8_8.2.0-14 libc6-dev_2.28-4 libstdc++-8-dev_8.2.0-14 libstdc++6_8.2.0-14 linux-libc-dev_4.19.13-1 Package versions: adduser_3.118 apt_1.8.0~alpha3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-11 binutils-common_2.31.1-11 binutils-x86-64-linux-gnu_2.31.1-11 bsdmainutils_11.1.2+b1 bsdutils_1:2.33-0.2 build-essential_12.5 bzip2_1.0.6-9 chrpath_0.16-2+b1 clang-8_1:8~svn350193-1~exp1 cmake_3.13.2-1 cmake-data_3.13.2-1 coreutils_8.30-1 cpp_4:8.2.0-2 cpp-8_8.2.0-14 dash_0.5.10.2-4 debconf_1.5.69 debhelper_12 debian-archive-keyring_2018.1 debianutils_4.8.6 dh-autoreconf_19 dh-python_3.20180927 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-3 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33-0.2 file_1:5.34-2 findutils_4.6.0+git+20181018-1 fonts-mathjax_2.7.4+dfsg-1 g++_4:8.2.0-2 g++-8_8.2.0-14 gcc_4:8.2.0-2 gcc-8_8.2.0-14 gcc-8-base_8.2.0-14 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:8.2.0-2 gfortran-8_8.2.0-14 gpgv_2.2.12-1 grep_3.3-1 groff-base_1.22.4-2 gzip_1.9-3 hostname_3.21 ibverbs-providers_21.0-1 icu-devtools_63.1-5 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.4 lib32gcc1_1:8.2.0-14 lib32stdc++6_8.2.0-14 libacl1_2.2.52-3+b1 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libamd2_1:5.4.0+dfsg-1 libapt-pkg5.0_1.8.0~alpha3 libarchive-zip-perl_1.64-1 libarchive13_3.3.3-3 libarpack2_3.6.3-1 libarpack2-dev_3.6.3-1 libasan5_8.2.0-14 libatomic1_8.2.0-14 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-11 libblas-dev_3.8.0-2 libblas3_3.8.0-2 libblkid1_2.33-0.2 libboost-atomic1.67-dev_1.67.0-11 libboost-atomic1.67.0_1.67.0-11 libboost-chrono-dev_1.67.0.1 libboost-chrono1.67-dev_1.67.0-11 libboost-chrono1.67.0_1.67.0-11 libboost-date-time1.67-dev_1.67.0-11 libboost-date-time1.67.0_1.67.0-11 libboost-dev_1.67.0.1 libboost-filesystem-dev_1.67.0.1 libboost-filesystem1.67-dev_1.67.0-11 libboost-filesystem1.67.0_1.67.0-11 libboost-iostreams-dev_1.67.0.1 libboost-iostreams1.67-dev_1.67.0-11 libboost-iostreams1.67.0_1.67.0-11 libboost-math-dev_1.67.0.1 libboost-math1.67-dev_1.67.0-11 libboost-math1.67.0_1.67.0-11 libboost-mpi-dev_1.67.0.1 libboost-mpi1.67-dev_1.67.0-11 libboost-mpi1.67.0_1.67.0-11 libboost-program-options-dev_1.67.0.1 libboost-program-options1.67-dev_1.67.0-11 libboost-program-options1.67.0_1.67.0-11 libboost-regex1.67-dev_1.67.0-11 libboost-regex1.67.0_1.67.0-11 libboost-serialization-dev_1.67.0.1 libboost-serialization1.67-dev_1.67.0-11 libboost-serialization1.67.0_1.67.0-11 libboost-system1.67-dev_1.67.0-11 libboost-system1.67.0_1.67.0-11 libboost-thread-dev_1.67.0.1 libboost-thread1.67-dev_1.67.0-11 libboost-thread1.67.0_1.67.0-11 libboost-timer-dev_1.67.0.1 libboost-timer1.67-dev_1.67.0-11 libboost-timer1.67.0_1.67.0-11 libboost1.67-dev_1.67.0-11 libbsd0_0.9.1-1 libbtf1_1:5.4.0+dfsg-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-4 libc-dev-bin_2.28-4 libc6_2.28-4 libc6-dev_2.28-4 libc6-i386_2.28-4 libcamd2_1:5.4.0+dfsg-1 libcap-ng0_0.7.9-1+b1 libcc1-0_8.2.0-14 libccolamd2_1:5.4.0+dfsg-1 libcholmod3_1:5.4.0+dfsg-1 libclang-common-8-dev_1:8~svn350193-1~exp1 libclang1-8_1:8~svn350193-1~exp1 libcolamd2_1:5.4.0+dfsg-1 libcom-err2_1.44.5-1 libcombblas1.16.0_1.6.2-3 libcroco3_0.6.12-3 libcurl4_7.62.0-1 libcxsparse3_1:5.4.0+dfsg-1 libdb5.3_5.3.28+dfsg1-0.2 libdebconfclient0_0.246 libdpkg-perl_1.19.2 libedit2_3.1-20181209-1 libeigen3-dev_3.3.7-1 libelf1_0.175-2 libevent-2.1-6_2.1.8-stable-4 libevent-core-2.1-6_2.1.8-stable-4 libevent-pthreads-2.1-6_2.1.8-stable-4 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.5-1 libfabric1_1.6.1-5 libfakeroot_1.23-1 libfdisk1_2.33-0.2 libffi6_3.2.1-9 libfftw3-bin_3.3.8-2 libfftw3-dev_3.3.8-2 libfftw3-double3_3.3.8-2 libfftw3-long3_3.3.8-2 libfftw3-mpi-dev_3.3.8-2 libfftw3-mpi3_3.3.8-2 libfftw3-quad3_3.3.8-2 libfftw3-single3_3.3.8-2 libfile-stripnondeterminism-perl_1.0.0-1 libgc1c2_1:7.6.4-0.4 libgcc-8-dev_8.2.0-14 libgcc1_1:8.2.0-14 libgcrypt20_1.8.4-4 libgdbm-compat4_1.18.1-2 libgdbm6_1.18.1-2 libgfortran-8-dev_8.2.0-14 libgfortran5_8.2.0-14 libglib2.0-0_2.58.2-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2 libgomp1_8.2.0-14 libgpg-error0_1.33-3 libgraphblas2_1:5.4.0+dfsg-1 libgssapi-krb5-2_1.16.2-1 libhdf5-mpi-dev_1.10.4+repack-8 libhdf5-openmpi-103_1.10.4+repack-8 libhdf5-openmpi-dev_1.10.4+repack-8 libhogweed4_3.4.1~rc1-1 libhwloc-dev_1.11.12-1 libhwloc-plugins_1.11.12-1 libhwloc5_1.11.12-1 libhypre-2.15.1_2.15.1-4 libhypre-dev_2.15.1-4 libibverbs-dev_21.0-1 libibverbs1_21.0-1 libicu-dev_63.1-5 libicu63_63.1-5 libidn2-0_2.0.5-1 libisl19_0.20-2 libitm1_8.2.0-14 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjs-jquery_3.2.1-1 libjs-jquery-ui_1.12.1+dfsg-5 libjs-mathjax_2.7.4+dfsg-1 libjsoncpp1_1.7.4-3 libk5crypto3_1.16.2-1 libkeyutils1_1.5.9-9.3 libklu1_1:5.4.0+dfsg-1 libkrb5-3_1.16.2-1 libkrb5support0_1.16.2-1 liblapack-dev_3.8.0-2 liblapack3_3.8.0-2 libldap-2.4-2_2.4.47+dfsg-1 libldap-common_2.4.47+dfsg-1 libldl2_1:5.4.0+dfsg-1 libllvm8_1:8~svn350193-1~exp1 liblsan0_8.2.0-14 libltdl-dev_2.4.6-6 libltdl7_2.4.6-6 liblz4-1_1.8.3-1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmetis5_5.1.0.dfsg-5+b2 libmongoose2_1:5.4.0+dfsg-1 libmount1_2.33-0.2 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2~rc1-1 libmpx2_8.2.0-14 libmumps-5.1.2_5.1.2-4+b2 libmumps-dev_5.1.2-4+b2 libncurses6_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1~rc1-1 libnghttp2-14_1.35.1-1+b1 libnl-3-200_3.4.0-1 libnl-3-dev_3.4.0-1 libnl-route-3-200_3.4.0-1 libnl-route-3-dev_3.4.0-1 libnuma-dev_2.0.12-1 libnuma1_2.0.12-1 libobjc-8-dev_8.2.0-14 libobjc4_8.2.0-14 libomp-8-dev_1:8~svn350193-1~exp1 libomp5-8_1:8~svn350193-1~exp1 libopenmpi-dev_3.1.3-9 libopenmpi3_3.1.3-9 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-4 libpam-modules-bin_1.1.8-4 libpam-runtime_1.1.8-4 libpam0g_1.1.8-4 libparpack2_3.6.3-1 libparpack2-dev_3.6.3-1 libpciaccess0_0.14-1 libpcre3_2:8.39-11 libperl5.28_5.28.1-3 libpetsc-real3.10_3.10.3+dfsg1-3 libpetsc-real3.10-dev_3.10.3+dfsg1-3 libpetsc3.10-dev-common_3.10.3+dfsg1-3 libpipeline1_1.5.0-2 libpmix2_3.1.0~rc2-3 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libpsm-infinipath1_3.3+20.604758e7-6 libpsm2-2_11.2.68-4 libptscotch-6.0_6.0.6-2 libptscotch-dev_6.0.6-2 libpython-stdlib_2.7.15-3 libpython2-stdlib_2.7.15-3 libpython2.7-minimal_2.7.15-5 libpython2.7-stdlib_2.7.15-5 libpython3-all-dev_3.7.1-3 libpython3-dev_3.7.1-3 libpython3-stdlib_3.7.1-3 libpython3.7_3.7.2-1 libpython3.7-dev_3.7.2-1 libpython3.7-minimal_3.7.2-1 libpython3.7-stdlib_3.7.2-1 libquadmath0_8.2.0-14 librbio2_1:5.4.0+dfsg-1 librdmacm1_21.0-1 libreadline7_7.0-5 librhash0_1.3.7-1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libscalapack-mpi-dev_2.0.2-7+b1 libscalapack-openmpi-dev_2.0.2-7+b1 libscalapack-openmpi2.0_2.0.2-7+b1 libscotch-6.0_6.0.6-2 libscotch-dev_6.0.6-2 libseccomp2_2.3.3-3 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslepc-real3.10_3.10.1+dfsg1-3 libslepc-real3.10-dev_3.10.1+dfsg1-3 libsmartcols1_2.33-0.2 libspqr2_1:5.4.0+dfsg-1 libsqlite3-0_3.26.0+fossilbc891ac6b-1 libss2_1.44.5-1 libssh2-1_1.8.0-2 libssl-dev_1.1.1a-1 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-14 libstdc++6_8.2.0-14 libsuitesparse-dev_1:5.4.0+dfsg-1 libsuitesparseconfig5_1:5.4.0+dfsg-1 libsuperlu-dev_5.2.1+dfsg1-3 libsuperlu-dist-dev_6.1.0+dfsg1-1 libsuperlu-dist6_6.1.0+dfsg1-1 libsuperlu5_5.2.1+dfsg1-3 libsystemd0_240-2 libsz2_1.0.2-1 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-1 libtool_2.4.6-6 libtsan0_8.2.0-14 libubsan1_8.2.0-14 libuchardet0_0.0.6-3 libudev1_240-2 libumfpack5_1:5.4.0+dfsg-1 libunistring2_0.9.10-1 libuuid1_2.33-0.2 libuv1_1.24.0-1 libxml2_2.9.4+dfsg1-7+b3 libxml2-dev_2.9.4+dfsg1-7+b3 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.13-1 login_1:4.5-1.1 lsb-base_10.2018112800 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-1 mawk_1.3.3-17+b3 mime-support_3.61 mount_2.33-0.2 mpi-default-bin_1.13 mpi-default-dev_1.13 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 ocl-icd-libopencl1_2.2.12-2 openmpi-bin_3.1.3-9 openmpi-common_3.1.3-9 openssh-client_1:7.9p1-4 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.28_5.28.1-3 petsc-dev_3.10.3+dfsg1-3 pkg-config_0.29-4+b1 po-debconf_1.0.21 procps_2:3.3.15-2 pybind11-dev_2.2.4-2 python_2.7.15-3 python-minimal_2.7.15-3 python2_2.7.15-3 python2-minimal_2.7.15-3 python2.7_2.7.15-5 python2.7-minimal_2.7.15-5 python3_3.7.1-3 python3-all_3.7.1-3 python3-all-dev_3.7.1-3 python3-dev_3.7.1-3 python3-dijitso_2018.1.0-5 python3-distutils_3.7.2-2 python3-ffc_2018.1.0-4 python3-fiat_2018.1.0-4 python3-lib2to3_3.7.2-2 python3-minimal_3.7.1-3 python3-mpi4py_2.0.0-3+b2 python3-mpmath_1.1.0-1 python3-numpy_1:1.16.0~rc2-1 python3-petsc4py_3.10.0-5 python3-petsc4py-real_3.10.0-5 python3-pkg-resources_40.6.2-1 python3-ply_3.11-3 python3-setuptools_40.6.2-1 python3-slepc4py_3.10.0-2 python3-slepc4py-real_3.10.0-2 python3-sympy_1.3-1 python3-ufl_2018.1.0-3 python3.7_3.7.2-1 python3.7-dev_3.7.2-1 python3.7-minimal_3.7.2-1 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-dolfin-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 slepc-dev_3.10.1+dfsg1-3 swig_3.0.12-1.2 swig3.0_3.0.12-1.2 sysvinit-utils_2.93-3 tar_1.30+dfsg-4 tzdata_2018i-1 util-linux_2.33-0.2 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Dec 26 09:41:07 2018 UTC gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./dolfin_2018.1.0.post1-13.dsc dpkg-source: info: extracting dolfin in /<> dpkg-source: info: unpacking dolfin_2018.1.0.post1.orig.tar.gz dpkg-source: info: unpacking dolfin_2018.1.0.post1-13.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying conditional-parmetis-in-cholmod.patch dpkg-source: info: applying test_mpi_oversubscribe.patch dpkg-source: info: applying mpi_prefer_mumps_not_superlu_dist.patch dpkg-source: info: applying skip_demo_hyperelasticity_mpi.patch dpkg-source: info: applying unittests_demos_include_dirs.patch dpkg-source: info: applying extra_CXXFLAGS.patch dpkg-source: info: applying PETSc_3.10_SNESTEST_removed.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=sid-amd64-sbuild-c6429cee-e68d-4e98-8d30-f5362e9b1906 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package dolfin dpkg-buildpackage: info: source version 2018.1.0.post1-13 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean py3versions: no X-Python3-Version in control file, using supported versions dh clean --buildsystem=cmake --with python3 debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions rm -rf installation-build build-tests dh_auto_clean make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build-arch py3versions: no X-Python3-Version in control file, using supported versions dh build-arch --buildsystem=cmake --with python3 dh_update_autotools_config -a -O--buildsystem=cmake dh_autoreconf -a -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions dh_auto_configure -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D PETSC_DIR:PATH=/usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real -D SLEPC_DIR:PATH=/usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real -D DOLFIN_ENABLE_TRILINOS:BOOL=OFF -D DOLFIN_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFIN_ENABLE_PARMETIS:BOOL=OFF -D DOLFIN_ENABLE_SCOTCH:BOOL=ON -D DOLFIN_ENABLE_DOCS:BOOL=OFF -D DOLFIN_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFIN_EXTRA_CXX_FLAGS:STRING="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" /<>/ cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D PETSC_DIR:PATH=/usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real -D SLEPC_DIR:PATH=/usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real -D DOLFIN_ENABLE_TRILINOS:BOOL=OFF -D DOLFIN_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFIN_ENABLE_PARMETIS:BOOL=OFF -D DOLFIN_ENABLE_SCOTCH:BOOL=ON -D DOLFIN_ENABLE_DOCS:BOOL=OFF -D DOLFIN_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFIN_EXTRA_CXX_FLAGS:STRING=-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" /<>/ .. -- The C compiler identification is Clang 8.0.0 -- The CXX compiler identification is Clang 8.0.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -- Boost version: 1.67.0 -- Found the following Boost libraries: -- timer -- filesystem -- program_options -- iostreams -- chrono -- system -- regex -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.2.90") -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.7.2", minimum required is "3") -- Found UFC: /usr/include (Required is at least version "2018.1") -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29") -- Checking for one of the modules 'craypetsc_real;PETSc' -- Test PETSC_TEST_RUNS with shared library linking - Success -- Looking for sys/types.h CMake Warning (dev) at /usr/share/cmake-3.13/Modules/CheckIncludeFile.cmake:70 (message): Policy CMP0075 is not set: Include file check macros honor CMAKE_REQUIRED_LIBRARIES. Run "cmake --help-policy CMP0075" for policy details. Use the cmake_policy command to set the policy and suppress this warning. CMAKE_REQUIRED_LIBRARIES is set to: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so For compatibility with CMake 3.11 and below this check is ignoring it. Call Stack (most recent call first): /usr/share/cmake-3.13/Modules/CheckTypeSize.cmake:225 (check_include_file) cmake/modules/FindPETSc.cmake:213 (check_type_size) CMakeLists.txt:301 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of PetscInt -- Check size of PetscInt - done -- Found PETSc: TRUE (found suitable version "3.10.3", minimum required is "3.7") -- Checking for one of the modules 'crayslepc_real;SLEPc' -- Test SLEPC_TEST_RUNS with shared library linking - Success -- Found SLEPc: TRUE (found suitable version "3.10.1", minimum required is "3.7") -- SUNDIALS could not be found/configured. (missing: SUNDIALS_LIBRARIES SUNDIALS_TEST_RUNS SUNDIALS_INCLUDE_DIRS SUNDIALS_VERSION SUNDIALS_VERSION_OK) (Required is at least version "3") -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 6.0.4) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'AMD' -- Looking for sgemm_ -- Looking for sgemm_ - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Checking for package 'UMFPACK' -- Checking for package 'AMD' -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- Found BLAS: /usr/lib/x86_64-linux-gnu/libblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Performing test CHOLMOD_TEST_RUNS - Success -- Performing test UMFPACK_TEST_RUNS - Success -- Found UMFPACK: /usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/gcc/x86_64-linux-gnu/8/libgfortran.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/gcc/x86_64-linux-gnu/8/libgfortran.so -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- Found BLAS: /usr/lib/x86_64-linux-gnu/libblas.so -- Performing test CHOLMOD_TEST_RUNS - Success -- Found CHOLMOD: /usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/gcc/x86_64-linux-gnu/8/libgfortran.so -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.4") found components: C -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFIN with shared libraries. * DOLFIN_AUTO_DETECT_MPI, Detect MPI automatically (turn this off to use the MPI compiler wrappers directly via setting CXX, CXX, FC). * DOLFIN_WITH_LIBRARY_VERSION, Build with library version information. * DOLFIN_ENABLE_MPI, Compile with support for MPI. * DOLFIN_ENABLE_PETSC, Compile with support for PETSc. * DOLFIN_ENABLE_SLEPC, Compile with support for SLEPc. * DOLFIN_ENABLE_UMFPACK, Compile with support for UMFPACK. * DOLFIN_ENABLE_CHOLMOD, Compile with support for CHOLMOD. * DOLFIN_ENABLE_SCOTCH, Compile with support for SCOTCH. * DOLFIN_ENABLE_SUNDIALS, Compile with support for SUNDIALS. * DOLFIN_ENABLE_ZLIB, Compile with support for zlib. * DOLFIN_ENABLE_HDF5, Compile with support for HDF5. -- The following OPTIONAL packages have been found: * MPI, Message Passing Interface (MPI) Enables DOLFIN to run in parallel with MPI * PETSc (required version >= 3.7), Portable, Extensible Toolkit for Scientific Computation, Enables the PETSc linear algebra backend * SLEPc (required version >= 3.7), Scalable Library for Eigenvalue Problem Computations, * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Enables parallel graph partitioning * UMFPACK, Sparse LU factorization library, * BLAS, Basic Linear Algebra Subprograms, * Threads * CHOLMOD, Sparse Cholesky factorization library for sparse matrices, * HDF5, Hierarchical Data Format 5 (HDF5), * ZLIB, Compression library, -- The following REQUIRED packages have been found: * Boost, Boost C++ libraries, * Eigen3 (required version >= 3.2.90), Lightweight C++ template library for linear algebra, * PythonInterp (required version >= 3), Interactive high-level object-oriented language, * UFC (required version >= 2018.1), Unified language for form-compilers (part of FFC), * PkgConfig -- The following features have been disabled: * CMAKE_USE_RELATIVE_PATHS, Use relative paths in makefiles and projects. * DOLFIN_ENABLE_CODE_COVERAGE, Enable code coverage. * DOLFIN_ENABLE_BENCHMARKS, Enable benchmark programs. * DOLFIN_ENABLE_DOCS, Enable generation of documentation. * DOLFIN_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * DOLFIN_DEPRECATION_ERROR, Turn deprecation warnings into errors. * DOLFIN_ENABLE_GEOMETRY_DEBUGGING, Enable geometry debugging. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. * DOLFIN_ENABLE_TRILINOS, Compile with support for Trilinos. * DOLFIN_ENABLE_PARMETIS, Compile with support for ParMETIS. -- The following OPTIONAL packages have not been found: * SUNDIALS (required version >= 3), SUite of Nonlinear and DIfferential/ALgebraic Equation Solvers, Provides robust time integrators and nonlinear solvers that can easily be incorporated into existing simulation codes. -- -- Generating demo source files from reStructuredText -- -------------------------------------------------- extract written to /<>/demo/documented/auto-adaptive-poisson/cpp/AdaptivePoisson.ufl extract written to /<>/demo/documented/auto-adaptive-poisson/cpp/main.cpp extract written to /<>/demo/documented/biharmonic/cpp/Biharmonic.ufl extract written to /<>/demo/documented/biharmonic/cpp/main.cpp extract written to /<>/demo/documented/built-in-meshes/cpp/main.cpp extract written to /<>/demo/documented/eigenvalue/cpp/StiffnessMatrix.ufl extract written to /<>/demo/documented/eigenvalue/cpp/main.cpp extract written to /<>/demo/documented/hyperelasticity/cpp/HyperElasticity.ufl extract written to /<>/demo/documented/hyperelasticity/cpp/main.cpp extract written to /<>/demo/documented/mixed-poisson/cpp/MixedPoisson.ufl extract written to /<>/demo/documented/mixed-poisson/cpp/main.cpp extract written to /<>/demo/documented/nonmatching-interpolation/cpp/P1.ufl extract written to /<>/demo/documented/nonmatching-interpolation/cpp/P3.ufl extract written to /<>/demo/documented/nonmatching-interpolation/cpp/main.cpp extract written to /<>/demo/documented/poisson/cpp/Poisson.ufl extract written to /<>/demo/documented/poisson/cpp/main.cpp -- -- Generating form files in demo, test and bench directories. May take some time... -- ---------------------------------------------------------------------------------------- -- -- Generating CMakeLists.txt files in demo, test and bench directories -- ------------------------------------------------------------------- -- -- Copying demo and test data to build directory. -- ---------------------------------------------- -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY PETSC_DIR SLEPC_DIR -- Build files have been written to: /<>/obj-x86_64-linux-gnu make[1]: Leaving directory '/<>' dh_auto_build -a -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles /<>/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/dolfin/ale /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/dolfin/ale /<>/obj-x86_64-linux-gnu/dolfin/ale/CMakeFiles/compile_ale_forms.dir/DependInfo.cmake --color= Scanning dependencies of target compile_ale_forms make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 0%] Compiling form Poisson1D.ufl cd /<>/obj-x86_64-linux-gnu/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /<>/obj-x86_64-linux-gnu /<>/dolfin/ale/Poisson1D.ufl [ 0%] Compiling form Poisson3D.ufl [ 0%] Compiling form Poisson2D.ufl cd /<>/obj-x86_64-linux-gnu/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /<>/obj-x86_64-linux-gnu /<>/dolfin/ale/Poisson3D.ufl cd /<>/obj-x86_64-linux-gnu/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /<>/obj-x86_64-linux-gnu /<>/dolfin/ale/Poisson2D.ufl /usr/lib/python3/dist-packages/ffc/uflacs/analysis/dependencies.py:61: FutureWarning: Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result. active[targets] = 1 /usr/lib/python3/dist-packages/ffc/uflacs/analysis/dependencies.py:61: FutureWarning: Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result. active[targets] = 1 /usr/lib/python3/dist-packages/ffc/uflacs/analysis/dependencies.py:61: FutureWarning: Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result. active[targets] = 1 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 0%] Built target compile_ale_forms make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/dolfin /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/dolfin /<>/obj-x86_64-linux-gnu/dolfin/CMakeFiles/dolfin.dir/DependInfo.cmake --color= Scanning dependencies of target dolfin make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o -c /<>/dolfin/adaptivity/adapt.cpp cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o -c /<>/dolfin/adaptivity/AdaptiveLinearVariationalSolver.cpp cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o -c /<>/dolfin/adaptivity/AdaptiveNonlinearVariationalSolver.cpp cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o -c /<>/dolfin/adaptivity/adaptivesolve.cpp [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o -c /<>/dolfin/adaptivity/ErrorControl.cpp [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o -c /<>/dolfin/adaptivity/Extrapolation.cpp [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o -c /<>/dolfin/adaptivity/GenericAdaptiveVariationalSolver.cpp [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o -c /<>/dolfin/adaptivity/GoalFunctional.cpp [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o -c /<>/dolfin/adaptivity/marking.cpp [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o -c /<>/dolfin/adaptivity/TimeSeries.cpp [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/ALE.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/ALE.cpp.o -c /<>/dolfin/ale/ALE.cpp [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -c /<>/dolfin/ale/HarmonicSmoothing.cpp [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o -c /<>/dolfin/ale/MeshDisplacement.cpp [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/defines.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -DDOLFIN_GIT_COMMIT_HASH=\"unknown\" -DUFC_SIGNATURE=\"1787c6a9a51ebb964350c957e727f7f916ef486d\" -o CMakeFiles/dolfin.dir/common/defines.cpp.o -c /<>/dolfin/common/defines.cpp [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/init.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/init.cpp.o -c /<>/dolfin/common/init.cpp [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/MPI.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/MPI.cpp.o -c /<>/dolfin/common/MPI.cpp [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o -c /<>/dolfin/common/SubSystemsManager.cpp [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/Timer.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/Timer.cpp.o -c /<>/dolfin/common/Timer.cpp [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/timing.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/timing.cpp.o -c /<>/dolfin/common/timing.cpp [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o -c /<>/dolfin/common/UniqueIdGenerator.cpp [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/utils.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/utils.cpp.o -c /<>/dolfin/common/utils.cpp [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/Variable.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/Variable.cpp.o -c /<>/dolfin/common/Variable.cpp [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/assemble.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/assemble.cpp.o -c /<>/dolfin/fem/assemble.cpp [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o -c /<>/dolfin/fem/assemble_local.cpp [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o -c /<>/dolfin/fem/AssemblerBase.cpp [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Assembler.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/Assembler.cpp.o -c /<>/dolfin/fem/Assembler.cpp [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o -c /<>/dolfin/fem/DirichletBC.cpp [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o -c /<>/dolfin/fem/DiscreteOperators.cpp [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o -c /<>/dolfin/fem/DofMapBuilder.cpp [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DofMap.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/DofMap.cpp.o -c /<>/dolfin/fem/DofMap.cpp [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Equation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/Equation.cpp.o -c /<>/dolfin/fem/Equation.cpp [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o -c /<>/dolfin/fem/fem_utils.cpp [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o -c /<>/dolfin/fem/FiniteElement.cpp [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Form.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/Form.cpp.o -c /<>/dolfin/fem/Form.cpp [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o -c /<>/dolfin/fem/LinearTimeDependentProblem.cpp [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o -c /<>/dolfin/fem/LinearVariationalProblem.cpp [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o -c /<>/dolfin/fem/LinearVariationalSolver.cpp [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o -c /<>/dolfin/fem/LocalAssembler.cpp [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o -c /<>/dolfin/fem/LocalSolver.cpp [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o -c /<>/dolfin/fem/MultiMeshAssembler.cpp [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o -c /<>/dolfin/fem/MultiMeshDirichletBC.cpp [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o -c /<>/dolfin/fem/MultiMeshDofMap.cpp [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o -c /<>/dolfin/fem/MultiMeshForm.cpp [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o -c /<>/dolfin/fem/NonlinearVariationalProblem.cpp [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o -c /<>/dolfin/fem/NonlinearVariationalSolver.cpp [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/PointSource.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/PointSource.cpp.o -c /<>/dolfin/fem/PointSource.cpp [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o -c /<>/dolfin/fem/PETScDMCollection.cpp [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/solve.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/solve.cpp.o -c /<>/dolfin/fem/solve.cpp [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o -c /<>/dolfin/fem/SparsityPatternBuilder.cpp [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o -c /<>/dolfin/fem/SystemAssembler.cpp [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/UFC.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/UFC.cpp.o -c /<>/dolfin/fem/UFC.cpp [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/assign.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/assign.cpp.o -c /<>/dolfin/function/assign.cpp [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o -c /<>/dolfin/function/CoefficientAssigner.cpp [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Constant.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/Constant.cpp.o -c /<>/dolfin/function/Constant.cpp [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Expression.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/Expression.cpp.o -c /<>/dolfin/function/Expression.cpp [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o -c /<>/dolfin/function/FunctionAssigner.cpp [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o -c /<>/dolfin/function/FunctionAXPY.cpp [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Function.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/Function.cpp.o -c /<>/dolfin/function/Function.cpp [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o -c /<>/dolfin/function/FunctionSpace.cpp [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o -c /<>/dolfin/function/GenericFunction.cpp [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o -c /<>/dolfin/function/LagrangeInterpolator.cpp [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o -c /<>/dolfin/function/MultiMeshCoefficientAssigner.cpp [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o -c /<>/dolfin/function/MultiMeshFunction.cpp [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o -c /<>/dolfin/function/MultiMeshFunctionSpace.cpp [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o -c /<>/dolfin/function/MultiMeshSubSpace.cpp [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o -c /<>/dolfin/function/SpecialFacetFunction.cpp [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/SpecialFunctions.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/SpecialFunctions.cpp.o -c /<>/dolfin/function/SpecialFunctions.cpp [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o -c /<>/dolfin/generation/BoxMesh.cpp [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o -c /<>/dolfin/generation/IntervalMesh.cpp [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o -c /<>/dolfin/generation/RectangleMesh.cpp [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o -c /<>/dolfin/generation/SphericalShellMesh.cpp [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o -c /<>/dolfin/generation/UnitDiscMesh.cpp [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o -c /<>/dolfin/generation/UnitTetrahedronMesh.cpp [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o -c /<>/dolfin/generation/UnitTriangleMesh.cpp [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o -c /<>/dolfin/geometry/BoundingBoxTree.cpp [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o -c /<>/dolfin/geometry/CollisionPredicates.cpp [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o -c /<>/dolfin/geometry/ConvexTriangulation.cpp [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o -c /<>/dolfin/geometry/GenericBoundingBoxTree.cpp [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o -c /<>/dolfin/geometry/GeometryDebugging.cpp [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o -c /<>/dolfin/geometry/GeometryPredicates.cpp [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/intersect.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/intersect.cpp.o -c /<>/dolfin/geometry/intersect.cpp [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o -c /<>/dolfin/geometry/IntersectionConstruction.cpp [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o -c /<>/dolfin/geometry/MeshPointIntersection.cpp [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/Point.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/Point.cpp.o -c /<>/dolfin/geometry/Point.cpp [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/predicates.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -c /<>/dolfin/geometry/predicates.cpp [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o -c /<>/dolfin/geometry/SimplexQuadrature.cpp [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o -c /<>/dolfin/graph/BoostGraphOrdering.cpp [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o -c /<>/dolfin/graph/GraphBuilder.cpp [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o -c /<>/dolfin/graph/GraphColoring.cpp [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o -c /<>/dolfin/graph/ParMETIS.cpp [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o -c /<>/dolfin/graph/SCOTCH.cpp [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o -c /<>/dolfin/graph/ZoltanInterface.cpp [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/base64.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/base64.cpp.o -c /<>/dolfin/io/base64.cpp [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/File.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/File.cpp.o -c /<>/dolfin/io/File.cpp [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/GenericFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/GenericFile.cpp.o -c /<>/dolfin/io/GenericFile.cpp [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o -c /<>/dolfin/io/HDF5Attribute.cpp [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5File.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/HDF5File.cpp.o -c /<>/dolfin/io/HDF5File.cpp [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o -c /<>/dolfin/io/HDF5Interface.cpp [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o -c /<>/dolfin/io/HDF5Utility.cpp [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/pugixml.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/pugixml.cpp.o -c /<>/dolfin/io/pugixml.cpp [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/RAWFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/RAWFile.cpp.o -c /<>/dolfin/io/RAWFile.cpp [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/SVGFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/SVGFile.cpp.o -c /<>/dolfin/io/SVGFile.cpp [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/VTKFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/VTKFile.cpp.o -c /<>/dolfin/io/VTKFile.cpp [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o -c /<>/dolfin/io/VTKWriter.cpp [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/X3DFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/X3DFile.cpp.o -c /<>/dolfin/io/X3DFile.cpp [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/X3DOM.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/X3DOM.cpp.o -c /<>/dolfin/io/X3DOM.cpp [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o -c /<>/dolfin/io/XDMFFile.cpp [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLFile.cpp.o -c /<>/dolfin/io/XMLFile.cpp [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o -c /<>/dolfin/io/XMLFunctionData.cpp [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o -c /<>/dolfin/io/XMLMesh.cpp [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o -c /<>/dolfin/io/XMLParameters.cpp [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLTable.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLTable.cpp.o -c /<>/dolfin/io/XMLTable.cpp [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/xmlutils.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/xmlutils.cpp.o -c /<>/dolfin/io/xmlutils.cpp [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLVector.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLVector.cpp.o -c /<>/dolfin/io/XMLVector.cpp [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XYZFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XYZFile.cpp.o -c /<>/dolfin/io/XYZFile.cpp [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o -c /<>/dolfin/la/Amesos2LUSolver.cpp [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o -c /<>/dolfin/la/BelosKrylovSolver.cpp [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o -c /<>/dolfin/la/BlockMatrix.cpp [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BlockVector.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/BlockVector.cpp.o -c /<>/dolfin/la/BlockVector.cpp [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o -c /<>/dolfin/la/CoordinateMatrix.cpp [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o -c /<>/dolfin/la/DefaultFactory.cpp [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o -c /<>/dolfin/la/EigenFactory.cpp [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o -c /<>/dolfin/la/EigenKrylovSolver.cpp [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o -c /<>/dolfin/la/EigenLUSolver.cpp [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o -c /<>/dolfin/la/EigenMatrix.cpp [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenVector.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenVector.cpp.o -c /<>/dolfin/la/EigenVector.cpp /<>/dolfin/la/EigenLUSolver.cpp:68:43: error: 'EigenLUImplBase' is a private member of 'dolfin::EigenLUSolver' class EigenLUImpl : public EigenLUSolver::EigenLUImplBase ^ /<>/dolfin/la/EigenLUSolver.h:88:11: note: declared private here class EigenLUImplBase; ^ In file included from /<>/dolfin/la/EigenLUSolver.cpp:49: In file included from /<>/dolfin/common/NoDeleter.h:26: In file included from /usr/bin/../lib/gcc/x86_64-linux-gnu/8/../../../../include/c++/8/memory:80: /usr/bin/../lib/gcc/x86_64-linux-gnu/8/../../../../include/c++/8/bits/unique_ptr.h:81:2: warning: delete called on 'dolfin::EigenLUSolver::EigenLUImplBase' that is abstract but has non-virtual destructor [-Wdelete-non-virtual-dtor] delete __ptr; ^ /usr/bin/../lib/gcc/x86_64-linux-gnu/8/../../../../include/c++/8/bits/unique_ptr.h:274:4: note: in instantiation of member function 'std::default_delete::operator()' requested here get_deleter()(__ptr); ^ /<>/dolfin/la/EigenLUSolver.cpp:148:16: note: in instantiation of member function 'std::unique_ptr >::~unique_ptr' requested here EigenLUSolver::EigenLUSolver(std::string method) ^ 1 warning and 1 error generated. make[3]: *** [dolfin/CMakeFiles/dolfin.dir/build.make:1665: dolfin/CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: *** [CMakeFiles/Makefile2:276: dolfin/CMakeFiles/dolfin.dir/all] Error 2 make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[1]: *** [Makefile:144: all] Error 2 make[1]: Leaving directory '/<>/obj-x86_64-linux-gnu' dh_auto_build: cd obj-x86_64-linux-gnu && make -j4 "INSTALL=install --strip-program=true" returned exit code 2 make: *** [debian/rules:157: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2019-01-09T18:59:20Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 284408 Build-Time: 180 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 50 Job: dolfin_2018.1.0.post1-13 Machine Architecture: amd64 Package: dolfin Package-Time: 246 Source-Version: 2018.1.0.post1-13 Space: 284408 Status: attempted Version: 2018.1.0.post1-13 -------------------------------------------------------------------------------- Finished at 2019-01-09T18:59:20Z Build needed 00:04:06, 284408k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 247.160963873s DC-Time-Estimation: 247.160963873 versus expected 1 (r/m: 246.160963873 ; m: 1.0)