DC-Build-Header: librostlab-blast 1.0.1-10 / 2020-05-03 04:58:49 +0000 DC-Task: type:rebuild-binarch-only source:librostlab-blast version:1.0.1-10 chroot:unstable esttime:102 logfile:/tmp/librostlab-blast_1.0.1-10_unstable_clang10.log modes:clang10:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --no-run-lintian --chroot-setup-commands=/tmp/clang10 librostlab-blast_1.0.1-10' sbuild (Debian sbuild) 0.78.1 (09 February 2019) on ip-172-31-3-251.eu-central-1.compute.internal +==============================================================================+ | librostlab-blast 1.0.1-10 (amd64) Sun, 03 May 2020 04:58:49 +0000 | +==============================================================================+ Package: librostlab-blast Version: 1.0.1-10 Source Version: 1.0.1-10 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-9702b404-6976-4227-a7ef-fee742917f13' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang10 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=10 + echo 'Install of clang-10' Install of clang-10 + apt-get update Get:1 http://127.0.0.1:12990/debian sid InRelease [146 kB] Get:2 http://127.0.0.1:12990/debian sid/main Sources.diff/Index [27.9 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://127.0.0.1:12990/debian sid/main Sources 2020-05-02-0208.16.pdiff [3982 B] Get:5 http://127.0.0.1:12990/debian sid/main Sources 2020-05-02-0807.49.pdiff [10.9 kB] Get:6 http://127.0.0.1:12990/debian sid/main Sources 2020-05-02-1412.30.pdiff [12.9 kB] Get:7 http://127.0.0.1:12990/debian sid/main Sources 2020-05-02-2007.10.pdiff [13.4 kB] Get:8 http://127.0.0.1:12990/debian sid/main Sources 2020-05-03-0208.39.pdiff [9476 B] Get:8 http://127.0.0.1:12990/debian sid/main Sources 2020-05-03-0208.39.pdiff [9476 B] Get:9 http://127.0.0.1:12990/debian sid/main amd64 Packages 2020-05-02-0208.16.pdiff [2772 B] Get:10 http://127.0.0.1:12990/debian sid/main amd64 Packages 2020-05-02-0807.49.pdiff [3238 B] Get:11 http://127.0.0.1:12990/debian sid/main amd64 Packages 2020-05-02-1412.30.pdiff [7641 B] Get:12 http://127.0.0.1:12990/debian sid/main amd64 Packages 2020-05-02-2007.10.pdiff [10.5 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 Packages 2020-05-03-0208.39.pdiff [18.4 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 Packages 2020-05-03-0208.39.pdiff [18.4 kB] Get:14 http://127.0.0.1:12990/debian sid/main Translation-en [6185 kB] Fetched 6480 kB in 2s (3907 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-10 libomp-10-dev libobjc-9-dev Reading package lists... Building dependency tree... The following additional packages will be installed: gcc-10-base lib32gcc-s1 lib32gcc1 lib32stdc++6 libatomic1 libbsd0 libc6-i386 libcc1-0 libclang-common-10-dev libclang-cpp10 libclang1-10 libedit2 libgc1c2 libgcc-s1 libgomp1 libitm1 libllvm10 liblsan0 libobjc4 libomp5-10 libquadmath0 libstdc++6 libtsan0 libubsan1 libz3-4 Suggested packages: clang-10-doc libomp-10-doc Recommended packages: llvm-10-dev python3 The following NEW packages will be installed: clang-10 lib32gcc-s1 lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-10-dev libclang-cpp10 libclang1-10 libedit2 libgc1c2 libllvm10 libobjc-9-dev libobjc4 libomp-10-dev libomp5-10 libz3-4 The following packages will be upgraded: gcc-10-base libatomic1 libcc1-0 libgcc-s1 libgomp1 libitm1 liblsan0 libquadmath0 libstdc++6 libtsan0 libubsan1 11 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. Need to get 51.4 MB of archives. After this operation, 259 MB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 libatomic1 amd64 10-20200502-1 [9048 B] Get:2 http://127.0.0.1:12990/debian sid/main amd64 libubsan1 amd64 10-20200502-1 [134 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libtsan0 amd64 10-20200502-1 [313 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 gcc-10-base amd64 10-20200502-1 [197 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libstdc++6 amd64 10-20200502-1 [492 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 libquadmath0 amd64 10-20200502-1 [145 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 liblsan0 amd64 10-20200502-1 [141 kB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 libitm1 amd64 10-20200502-1 [25.7 kB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 libgomp1 amd64 10-20200502-1 [99.3 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 libcc1-0 amd64 10-20200502-1 [39.7 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 libgcc-s1 amd64 10-20200502-1 [41.2 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 libedit2 amd64 3.1-20191231-1 [95.4 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 libz3-4 amd64 4.8.7-4 [6790 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 libllvm10 amd64 1:10.0.0-4 [15.5 MB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 libclang-cpp10 amd64 1:10.0.0-4 [10.1 MB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 libgc1c2 amd64 1:7.6.4-0.4 [224 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 libobjc4 amd64 10-20200502-1 [41.6 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libobjc-9-dev amd64 9.3.0-11 [218 kB] Get:20 http://127.0.0.1:12990/debian sid/main amd64 libc6-i386 amd64 2.30-4 [2926 kB] Get:21 http://127.0.0.1:12990/debian sid/main amd64 lib32gcc-s1 amd64 10-20200502-1 [49.4 kB] Get:22 http://127.0.0.1:12990/debian sid/main amd64 lib32gcc1 amd64 1:10-20200502-1 [1100 B] Get:23 http://127.0.0.1:12990/debian sid/main amd64 lib32stdc++6 amd64 10-20200502-1 [510 kB] Get:24 http://127.0.0.1:12990/debian sid/main amd64 libclang-common-10-dev amd64 1:10.0.0-4 [5062 kB] Get:25 http://127.0.0.1:12990/debian sid/main amd64 libclang1-10 amd64 1:10.0.0-4 [7609 kB] Get:26 http://127.0.0.1:12990/debian sid/main amd64 clang-10 amd64 1:10.0.0-4 [105 kB] Get:27 http://127.0.0.1:12990/debian sid/main amd64 libomp5-10 amd64 1:10.0.0-4 [338 kB] Get:28 http://127.0.0.1:12990/debian sid/main amd64 libomp-10-dev amd64 1:10.0.0-4 [85.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 51.4 MB in 0s (138 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12123 files and directories currently installed.) Preparing to unpack .../libatomic1_10-20200502-1_amd64.deb ... Unpacking libatomic1:amd64 (10-20200502-1) over (10-20200418-1) ... Preparing to unpack .../libubsan1_10-20200502-1_amd64.deb ... Unpacking libubsan1:amd64 (10-20200502-1) over (10-20200418-1) ... Preparing to unpack .../libtsan0_10-20200502-1_amd64.deb ... Unpacking libtsan0:amd64 (10-20200502-1) over (10-20200418-1) ... Preparing to unpack .../gcc-10-base_10-20200502-1_amd64.deb ... Unpacking gcc-10-base:amd64 (10-20200502-1) over (10-20200418-1) ... Setting up gcc-10-base:amd64 (10-20200502-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12123 files and directories currently installed.) Preparing to unpack .../libstdc++6_10-20200502-1_amd64.deb ... Unpacking libstdc++6:amd64 (10-20200502-1) over (10-20200418-1) ... Setting up libstdc++6:amd64 (10-20200502-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12123 files and directories currently installed.) Preparing to unpack .../0-libquadmath0_10-20200502-1_amd64.deb ... Unpacking libquadmath0:amd64 (10-20200502-1) over (10-20200418-1) ... Preparing to unpack .../1-liblsan0_10-20200502-1_amd64.deb ... Unpacking liblsan0:amd64 (10-20200502-1) over (10-20200418-1) ... Preparing to unpack .../2-libitm1_10-20200502-1_amd64.deb ... Unpacking libitm1:amd64 (10-20200502-1) over (10-20200418-1) ... Preparing to unpack .../3-libgomp1_10-20200502-1_amd64.deb ... Unpacking libgomp1:amd64 (10-20200502-1) over (10-20200418-1) ... Preparing to unpack .../4-libcc1-0_10-20200502-1_amd64.deb ... Unpacking libcc1-0:amd64 (10-20200502-1) over (10-20200418-1) ... Preparing to unpack .../5-libgcc-s1_10-20200502-1_amd64.deb ... Unpacking libgcc-s1:amd64 (10-20200502-1) over (10-20200418-1) ... Setting up libgcc-s1:amd64 (10-20200502-1) ... Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12123 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../01-libedit2_3.1-20191231-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20191231-1) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../02-libz3-4_4.8.7-4_amd64.deb ... Unpacking libz3-4:amd64 (4.8.7-4) ... Selecting previously unselected package libllvm10:amd64. Preparing to unpack .../03-libllvm10_1%3a10.0.0-4_amd64.deb ... Unpacking libllvm10:amd64 (1:10.0.0-4) ... Selecting previously unselected package libclang-cpp10. Preparing to unpack .../04-libclang-cpp10_1%3a10.0.0-4_amd64.deb ... Unpacking libclang-cpp10 (1:10.0.0-4) ... Selecting previously unselected package libgc1c2:amd64. Preparing to unpack .../05-libgc1c2_1%3a7.6.4-0.4_amd64.deb ... Unpacking libgc1c2:amd64 (1:7.6.4-0.4) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../06-libobjc4_10-20200502-1_amd64.deb ... Unpacking libobjc4:amd64 (10-20200502-1) ... Selecting previously unselected package libobjc-9-dev:amd64. Preparing to unpack .../07-libobjc-9-dev_9.3.0-11_amd64.deb ... Unpacking libobjc-9-dev:amd64 (9.3.0-11) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../08-libc6-i386_2.30-4_amd64.deb ... Unpacking libc6-i386 (2.30-4) ... Selecting previously unselected package lib32gcc-s1. Preparing to unpack .../09-lib32gcc-s1_10-20200502-1_amd64.deb ... Unpacking lib32gcc-s1 (10-20200502-1) ... Selecting previously unselected package lib32gcc1. Preparing to unpack .../10-lib32gcc1_1%3a10-20200502-1_amd64.deb ... Unpacking lib32gcc1 (1:10-20200502-1) ... Selecting previously unselected package lib32stdc++6. Preparing to unpack .../11-lib32stdc++6_10-20200502-1_amd64.deb ... Unpacking lib32stdc++6 (10-20200502-1) ... Selecting previously unselected package libclang-common-10-dev. Preparing to unpack .../12-libclang-common-10-dev_1%3a10.0.0-4_amd64.deb ... Unpacking libclang-common-10-dev (1:10.0.0-4) ... Selecting previously unselected package libclang1-10. Preparing to unpack .../13-libclang1-10_1%3a10.0.0-4_amd64.deb ... Unpacking libclang1-10 (1:10.0.0-4) ... Selecting previously unselected package clang-10. Preparing to unpack .../14-clang-10_1%3a10.0.0-4_amd64.deb ... Unpacking clang-10 (1:10.0.0-4) ... Selecting previously unselected package libomp5-10:amd64. Preparing to unpack .../15-libomp5-10_1%3a10.0.0-4_amd64.deb ... Unpacking libomp5-10:amd64 (1:10.0.0-4) ... Selecting previously unselected package libomp-10-dev. Preparing to unpack .../16-libomp-10-dev_1%3a10.0.0-4_amd64.deb ... Unpacking libomp-10-dev (1:10.0.0-4) ... Setting up libgc1c2:amd64 (1:7.6.4-0.4) ... Setting up libobjc4:amd64 (10-20200502-1) ... Setting up libgomp1:amd64 (10-20200502-1) ... Setting up libz3-4:amd64 (4.8.7-4) ... Setting up libquadmath0:amd64 (10-20200502-1) ... Setting up libatomic1:amd64 (10-20200502-1) ... Setting up libobjc-9-dev:amd64 (9.3.0-11) ... Setting up libubsan1:amd64 (10-20200502-1) ... Setting up libomp5-10:amd64 (1:10.0.0-4) ... Setting up libc6-i386 (2.30-4) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libcc1-0:amd64 (10-20200502-1) ... Setting up liblsan0:amd64 (10-20200502-1) ... Setting up libitm1:amd64 (10-20200502-1) ... Setting up libtsan0:amd64 (10-20200502-1) ... Setting up libomp-10-dev (1:10.0.0-4) ... Setting up libedit2:amd64 (3.1-20191231-1) ... Setting up libllvm10:amd64 (1:10.0.0-4) ... Setting up lib32gcc-s1 (10-20200502-1) ... Setting up libclang1-10 (1:10.0.0-4) ... Setting up lib32gcc1 (1:10-20200502-1) ... Setting up libclang-cpp10 (1:10.0.0-4) ... Setting up lib32stdc++6 (10-20200502-1) ... Setting up libclang-common-10-dev (1:10.0.0-4) ... Setting up clang-10 (1:10.0.0-4) ... Processing triggers for libc-bin (2.30-4) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8 9 10' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-10 g++-4.6 + ln -s clang-10 gcc-4.6 + ln -s clang-10 cpp-4.6 + ln -s clang-10 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-10 g++-4.7 + ln -s clang-10 gcc-4.7 + ln -s clang-10 cpp-4.7 + ln -s clang-10 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-10 g++-4.8 + ln -s clang-10 gcc-4.8 + ln -s clang-10 cpp-4.8 + ln -s clang-10 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-10 g++-4.9 + ln -s clang-10 gcc-4.9 + ln -s clang-10 cpp-4.9 + ln -s clang-10 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-10 g++-5 + ln -s clang-10 gcc-5 + ln -s clang-10 cpp-5 + ln -s clang-10 gcc + echo 'gcc-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-10 g++-6 + ln -s clang-10 gcc-6 + ln -s clang-10 cpp-6 + ln -s clang-10 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-10 g++-7 + ln -s clang-10 gcc-7 + ln -s clang-10 cpp-7 + ln -s clang-10 gcc + echo 'gcc-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-10 g++-8 + ln -s clang-10 gcc-8 + ln -s clang-10 cpp-8 + ln -s clang-10 gcc + echo 'gcc-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-9 gcc-9 cpp-9 gcc + ln -s clang++-10 g++-9 + ln -s clang-10 gcc-9 + ln -s clang-10 cpp-9 + ln -s clang-10 gcc + echo 'gcc-9 hold' + dpkg --set-selections + echo 'g++-9 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-10 gcc-10 cpp-10 gcc + ln -s clang++-10 g++-10 + ln -s clang-10 gcc-10 + ln -s clang-10 cpp-10 + ln -s clang-10 gcc + echo 'gcc-10 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-10 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-10 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-10 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + cd - /build/librostlab-blast-0LFS3I + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang + cd /usr/bin/ + rm -f clang++ clang + ln -s clang-10 clang++ + ln -s clang-10 clang + clang++ --version clang version 10.0.0-4 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + clang --version clang version 10.0.0-4 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + cd - /build/librostlab-blast-0LFS3I + apt install --yes --no-install-recommends --force-yes qt5-qmake WARNING: apt does not have a stable CLI interface. Use with caution in scripts. Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: qt5-qmake-bin qtchooser The following NEW packages will be installed: qt5-qmake qt5-qmake-bin qtchooser 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 1270 kB of archives. After this operation, 4788 kB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake-bin amd64 5.12.5+dfsg-10 [1015 kB] Get:2 http://127.0.0.1:12990/debian sid/main amd64 qtchooser amd64 66-2 [26.3 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake amd64 5.12.5+dfsg-10 [229 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1270 kB in 0s (56.0 MB/s) Selecting previously unselected package qt5-qmake-bin. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12968 files and directories currently installed.) Preparing to unpack .../qt5-qmake-bin_5.12.5+dfsg-10_amd64.deb ... Unpacking qt5-qmake-bin (5.12.5+dfsg-10) ... Selecting previously unselected package qtchooser. Preparing to unpack .../qtchooser_66-2_amd64.deb ... Unpacking qtchooser (66-2) ... Selecting previously unselected package qt5-qmake:amd64. Preparing to unpack .../qt5-qmake_5.12.5+dfsg-10_amd64.deb ... Unpacking qt5-qmake:amd64 (5.12.5+dfsg-10) ... Setting up qt5-qmake-bin (5.12.5+dfsg-10) ... Setting up qtchooser (66-2) ... Setting up qt5-qmake:amd64 (5.12.5+dfsg-10) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + cp /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qmake.conf /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qplatformdefs.h /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ + ls -al /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ total 16 drwxr-xr-x 2 root root 4096 May 3 04:59 . drwxr-xr-x 75 root root 4096 May 3 04:59 .. -rw-r--r-- 1 root root 276 May 3 04:59 qmake.conf -rw-r--r-- 1 root root 3218 May 3 04:59 qplatformdefs.h + cat /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/qmake.conf # # qmake configuration for linux-clang # MAKEFILE_GENERATOR = UNIX CONFIG += incremental QMAKE_INCREMENTAL_STYLE = sublib include(../common/linux.conf) include(../common/gcc-base-unix.conf) include(../common/clang.conf) QMAKE_LFLAGS += -ccc-gcc-name g++ load(qt_config) + export QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + sed -i -e 's|compare_problem(2,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + sed -i -e 's|compare_problem(1,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + grep 'compare_problem(' /usr/bin/dpkg-gensymbols compare_problem(4, g_('new libraries appeared in the symbols file: %s'), "@libs"); compare_problem(3, g_('some libraries disappeared in the symbols file: %s'), "@libs"); compare_problem(0, g_('some new symbols appeared in the symbols file: %s'), compare_problem(0, g_('some symbols or patterns disappeared in the symbols file: %s'), I: Finished running '/tmp/clang10'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/librostlab-blast-0LFS3I/resolver-9YL4Qn' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:12990/debian sid InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'librostlab-blast' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/librostlab-blast.git Please use: git clone https://salsa.debian.org/med-team/librostlab-blast.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 392 kB of source archives. Get:1 http://127.0.0.1:12990/debian sid/main librostlab-blast 1.0.1-10 (dsc) [2389 B] Get:2 http://127.0.0.1:12990/debian sid/main librostlab-blast 1.0.1-10 (tar) [384 kB] Get:3 http://127.0.0.1:12990/debian sid/main librostlab-blast 1.0.1-10 (diff) [5280 B] Fetched 392 kB in 0s (4743 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/librostlab-blast-0LFS3I/librostlab-blast-1.0.1' with '<>' I: NOTICE: Log filtering will replace 'build/librostlab-blast-0LFS3I' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 11~), d-shlibs, bison, doxygen, flex, graphviz, texlive-latex-recommended, librostlab-dev, texlive-fonts-recommended, texlive-latex-extra, build-essential, fakeroot Filtered Build-Depends: debhelper (>= 11~), d-shlibs, bison, doxygen, flex, graphviz, texlive-latex-recommended, librostlab-dev, texlive-fonts-recommended, texlive-latex-extra, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [436 B] Get:5 copy:/<>/apt_archive ./ Packages [520 B] Fetched 1913 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file flex fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base graphviz groff-base intltool-debian libann0 libapache-pom-java libarchive-zip-perl libcairo2 libcdt5 libcgraph6 libclang1-9 libcommons-logging-java libcommons-parent-java libcroco3 libdatrie1 libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl libfontbox-java libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu63 libjbig0 libjpeg62-turbo libkpathsea6 liblab-gamut1 libllvm9 libltdl7 libmagic-mgc libmagic1 libmpdec2 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpdfbox-java libpipeline1 libpixman-1-0 libpng16-16 libptexenc1 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 librostlab3 librostlab3-dev libsigsegv2 libsm6 libsqlite3-0 libssl1.1 libsub-override-perl libsynctex2 libteckit0 libtexlua53 libtexluajit2 libthai-data libthai0 libtiff5 libtool libuchardet0 libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libzzip-0-13 m4 man-db mime-support po-debconf preview-latex-style python3 python3-minimal python3.8 python3.8-minimal readline-common sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui flex-doc gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff libavalon-framework-java libcommons-logging-java-doc libexcalibur-logkit-java liblog4j1.2-java libgd-tools librostlab-doc libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.8-venv python3.8-doc binfmt-support readline-doc ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-fonts-recommended-doc texlive-latex-base-doc python3-pygments icc-profiles libfile-which-perl libspreadsheet-parseexcel-perl texlive-latex-extra-doc texlive-latex-recommended-doc texlive-luatex texlive-pstricks dot2tex prerex ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex Recommended packages: libfl-dev curl | wget | lynx fonts-liberation libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin libltdl-dev libmail-sendmail-perl lmodern dvisvgm tex-gyre tipa texlive-plain-generic ruby | ruby-interpreter tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file flex fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base graphviz groff-base intltool-debian libann0 libapache-pom-java libarchive-zip-perl libcairo2 libcdt5 libcgraph6 libclang1-9 libcommons-logging-java libcommons-parent-java libcroco3 libdatrie1 libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl libfontbox-java libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu63 libjbig0 libjpeg62-turbo libkpathsea6 liblab-gamut1 libllvm9 libltdl7 libmagic-mgc libmagic1 libmpdec2 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpdfbox-java libpipeline1 libpixman-1-0 libpng16-16 libptexenc1 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 librostlab3 librostlab3-dev libsigsegv2 libsm6 libsqlite3-0 libssl1.1 libsub-override-perl libsynctex2 libteckit0 libtexlua53 libtexluajit2 libthai-data libthai0 libtiff5 libtool libuchardet0 libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libzzip-0-13 m4 man-db mime-support po-debconf preview-latex-style python3 python3-minimal python3.8 python3.8-minimal readline-common sbuild-build-depends-main-dummy sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils 0 upgraded, 133 newly installed, 0 to remove and 0 not upgraded. Need to get 154 MB of archives. After this operation, 571 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [948 B] Get:2 http://127.0.0.1:12990/debian sid/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 flex amd64 2.6.4-6.2 [456 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 libpython3.8-minimal amd64 3.8.3~rc1-1 [760 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 python3.8-minimal amd64 3.8.3~rc1-1 [1944 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 python3-minimal amd64 3.8.2-3 [37.6 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 mime-support all 3.64 [37.8 kB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 libmpdec2 amd64 2.4.2-3 [84.1 kB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 readline-common all 8.0-4 [72.5 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libsqlite3-0 amd64 3.31.1-5 [661 kB] Get:20 http://127.0.0.1:12990/debian sid/main amd64 libpython3.8-stdlib amd64 3.8.3~rc1-1 [1667 kB] Get:21 http://127.0.0.1:12990/debian sid/main amd64 python3.8 amd64 3.8.3~rc1-1 [415 kB] Get:22 http://127.0.0.1:12990/debian sid/main amd64 libpython3-stdlib amd64 3.8.2-3 [20.8 kB] Get:23 http://127.0.0.1:12990/debian sid/main amd64 python3 amd64 3.8.2-3 [63.7 kB] Get:24 http://127.0.0.1:12990/debian sid/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:25 http://127.0.0.1:12990/debian sid/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:26 http://127.0.0.1:12990/debian sid/main amd64 tex-common all 6.14 [53.3 kB] Get:27 http://127.0.0.1:12990/debian sid/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:28 http://127.0.0.1:12990/debian sid/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:29 http://127.0.0.1:12990/debian sid/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:30 http://127.0.0.1:12990/debian sid/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:31 http://127.0.0.1:12990/debian sid/main amd64 autoconf all 2.69-11.1 [341 kB] Get:32 http://127.0.0.1:12990/debian sid/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:33 http://127.0.0.1:12990/debian sid/main amd64 automake all 1:1.16.2-1 [775 kB] Get:34 http://127.0.0.1:12990/debian sid/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:35 http://127.0.0.1:12990/debian sid/main amd64 bison amd64 2:3.5.3+dfsg-1 [967 kB] Get:36 http://127.0.0.1:12990/debian sid/main amd64 d-shlibs all 0.91 [17.6 kB] Get:37 http://127.0.0.1:12990/debian sid/main amd64 libtool all 2.4.6-14 [513 kB] Get:38 http://127.0.0.1:12990/debian sid/main amd64 dh-autoreconf all 19 [16.9 kB] Get:39 http://127.0.0.1:12990/debian sid/main amd64 libdebhelper-perl all 13 [184 kB] Get:40 http://127.0.0.1:12990/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:41 http://127.0.0.1:12990/debian sid/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:42 http://127.0.0.1:12990/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.8.0-1 [24.2 kB] Get:43 http://127.0.0.1:12990/debian sid/main amd64 dh-strip-nondeterminism all 1.8.0-1 [14.8 kB] Get:44 http://127.0.0.1:12990/debian sid/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:45 http://127.0.0.1:12990/debian sid/main amd64 dwz amd64 0.13-5 [151 kB] Get:46 http://127.0.0.1:12990/debian sid/main amd64 libglib2.0-0 amd64 2.64.2-1 [1343 kB] Get:47 http://127.0.0.1:12990/debian sid/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:48 http://127.0.0.1:12990/debian sid/main amd64 libxml2 amd64 2.9.10+dfsg-5 [709 kB] Get:49 http://127.0.0.1:12990/debian sid/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:50 http://127.0.0.1:12990/debian sid/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:51 http://127.0.0.1:12990/debian sid/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:52 http://127.0.0.1:12990/debian sid/main amd64 po-debconf all 1.0.21 [248 kB] Get:53 http://127.0.0.1:12990/debian sid/main amd64 debhelper all 13 [1002 kB] Get:54 http://127.0.0.1:12990/debian sid/main amd64 libllvm9 amd64 1:9.0.1-12 [15.0 MB] Get:55 http://127.0.0.1:12990/debian sid/main amd64 libclang1-9 amd64 1:9.0.1-12 [6713 kB] Get:56 http://127.0.0.1:12990/debian sid/main amd64 libxapian30 amd64 1.4.15-1 [1085 kB] Get:57 http://127.0.0.1:12990/debian sid/main amd64 doxygen amd64 1.8.17-1 [9482 kB] Get:58 http://127.0.0.1:12990/debian sid/main amd64 libpng16-16 amd64 1.6.37-2 [292 kB] Get:59 http://127.0.0.1:12990/debian sid/main amd64 libfreetype6 amd64 2.10.1-2 [392 kB] Get:60 http://127.0.0.1:12990/debian sid/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:61 http://127.0.0.1:12990/debian sid/main amd64 fontconfig-config all 2.13.1-4 [281 kB] Get:62 http://127.0.0.1:12990/debian sid/main amd64 libfontconfig1 amd64 2.13.1-4 [347 kB] Get:63 http://127.0.0.1:12990/debian sid/main amd64 fontconfig amd64 2.13.1-4 [416 kB] Get:64 http://127.0.0.1:12990/debian sid/main amd64 fonts-lmodern all 2.004.5-6 [4539 kB] Get:65 http://127.0.0.1:12990/debian sid/main amd64 libann0 amd64 1.1.2+doc-7 [25.3 kB] Get:66 http://127.0.0.1:12990/debian sid/main amd64 libcdt5 amd64 2.42.2-4 [60.7 kB] Get:67 http://127.0.0.1:12990/debian sid/main amd64 libcgraph6 amd64 2.42.2-4 [85.0 kB] Get:68 http://127.0.0.1:12990/debian sid/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB] Get:69 http://127.0.0.1:12990/debian sid/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:70 http://127.0.0.1:12990/debian sid/main amd64 libwebp6 amd64 0.6.1-2+b1 [261 kB] Get:71 http://127.0.0.1:12990/debian sid/main amd64 libtiff5 amd64 4.1.0+git191117-2 [271 kB] Get:72 http://127.0.0.1:12990/debian sid/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:73 http://127.0.0.1:12990/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:74 http://127.0.0.1:12990/debian sid/main amd64 libxcb1 amd64 1.14-2 [139 kB] Get:75 http://127.0.0.1:12990/debian sid/main amd64 libx11-data all 2:1.6.9-2 [298 kB] Get:76 http://127.0.0.1:12990/debian sid/main amd64 libx11-6 amd64 2:1.6.9-2 [759 kB] Get:77 http://127.0.0.1:12990/debian sid/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:78 http://127.0.0.1:12990/debian sid/main amd64 libgd3 amd64 2.3.0-1 [137 kB] Get:79 http://127.0.0.1:12990/debian sid/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-4+b1 [158 kB] Get:80 http://127.0.0.1:12990/debian sid/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get:81 http://127.0.0.1:12990/debian sid/main amd64 libxcb-render0 amd64 1.14-2 [111 kB] Get:82 http://127.0.0.1:12990/debian sid/main amd64 libxcb-shm0 amd64 1.14-2 [101 kB] Get:83 http://127.0.0.1:12990/debian sid/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:84 http://127.0.0.1:12990/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:85 http://127.0.0.1:12990/debian sid/main amd64 libcairo2 amd64 1.16.0-4 [689 kB] Get:86 http://127.0.0.1:12990/debian sid/main amd64 libltdl7 amd64 2.4.6-14 [390 kB] Get:87 http://127.0.0.1:12990/debian sid/main amd64 libfribidi0 amd64 1.0.8-2 [64.8 kB] Get:88 http://127.0.0.1:12990/debian sid/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:89 http://127.0.0.1:12990/debian sid/main amd64 libharfbuzz0b amd64 2.6.4-1 [1360 kB] Get:90 http://127.0.0.1:12990/debian sid/main amd64 libthai-data all 0.1.28-3 [170 kB] Get:91 http://127.0.0.1:12990/debian sid/main amd64 libdatrie1 amd64 0.2.12-3 [39.5 kB] Get:92 http://127.0.0.1:12990/debian sid/main amd64 libthai0 amd64 0.1.28-3 [54.2 kB] Get:93 http://127.0.0.1:12990/debian sid/main amd64 libpango-1.0-0 amd64 1.44.7-4 [183 kB] Get:94 http://127.0.0.1:12990/debian sid/main amd64 libpangoft2-1.0-0 amd64 1.44.7-4 [59.0 kB] Get:95 http://127.0.0.1:12990/debian sid/main amd64 libpangocairo-1.0-0 amd64 1.44.7-4 [48.9 kB] Get:96 http://127.0.0.1:12990/debian sid/main amd64 libpathplan4 amd64 2.42.2-4 [63.9 kB] Get:97 http://127.0.0.1:12990/debian sid/main amd64 libgvc6 amd64 2.42.2-4 [691 kB] Get:98 http://127.0.0.1:12990/debian sid/main amd64 libgvpr2 amd64 2.42.2-4 [211 kB] Get:99 http://127.0.0.1:12990/debian sid/main amd64 liblab-gamut1 amd64 2.42.2-4 [221 kB] Get:100 http://127.0.0.1:12990/debian sid/main amd64 x11-common all 1:7.7+20 [252 kB] Get:101 http://127.0.0.1:12990/debian sid/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:102 http://127.0.0.1:12990/debian sid/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:103 http://127.0.0.1:12990/debian sid/main amd64 libxt6 amd64 1:1.1.5-1+b3 [190 kB] Get:104 http://127.0.0.1:12990/debian sid/main amd64 libxmu6 amd64 2:1.1.2-2+b3 [60.8 kB] Get:105 http://127.0.0.1:12990/debian sid/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get:106 http://127.0.0.1:12990/debian sid/main amd64 graphviz amd64 2.42.2-4 [630 kB] Get:107 http://127.0.0.1:12990/debian sid/main amd64 libapache-pom-java all 18-1 [4676 B] Get:108 http://127.0.0.1:12990/debian sid/main amd64 libcommons-parent-java all 43-1 [10.8 kB] Get:109 http://127.0.0.1:12990/debian sid/main amd64 libcommons-logging-java all 1.2-2 [62.2 kB] Get:110 http://127.0.0.1:12990/debian sid/main amd64 libfontbox-java all 1:1.8.16-2 [211 kB] Get:111 http://127.0.0.1:12990/debian sid/main amd64 libkpathsea6 amd64 2020.20200327.54578-4 [172 kB] Get:112 http://127.0.0.1:12990/debian sid/main amd64 libpaper1 amd64 1.1.28+b1 [21.6 kB] Get:113 http://127.0.0.1:12990/debian sid/main amd64 libpaper-utils amd64 1.1.28+b1 [18.3 kB] Get:114 http://127.0.0.1:12990/debian sid/main amd64 libpdfbox-java all 1:1.8.16-2 [5205 kB] Get:115 http://127.0.0.1:12990/debian sid/main amd64 libptexenc1 amd64 2020.20200327.54578-4 [63.5 kB] Get:116 http://127.0.0.1:12990/debian sid/main amd64 librostlab3 amd64 1.0.20-10 [6356 B] Get:117 http://127.0.0.1:12990/debian sid/main amd64 librostlab3-dev amd64 1.0.20-10 [14.0 kB] Get:118 http://127.0.0.1:12990/debian sid/main amd64 libsynctex2 amd64 2020.20200327.54578-4 [82.5 kB] Get:119 http://127.0.0.1:12990/debian sid/main amd64 libteckit0 amd64 2.5.8+ds2-5 [318 kB] Get:120 http://127.0.0.1:12990/debian sid/main amd64 libtexlua53 amd64 2020.20200327.54578-4 [128 kB] Get:121 http://127.0.0.1:12990/debian sid/main amd64 libtexluajit2 amd64 2020.20200327.54578-4 [258 kB] Get:122 http://127.0.0.1:12990/debian sid/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB] Get:123 http://127.0.0.1:12990/debian sid/main amd64 libzzip-0-13 amd64 0.13.62-3.2 [55.4 kB] Get:124 http://127.0.0.1:12990/debian sid/main amd64 preview-latex-style all 11.91-2 [201 kB] Get:125 http://127.0.0.1:12990/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:126 http://127.0.0.1:12990/debian sid/main amd64 texlive-binaries amd64 2020.20200327.54578-4 [9661 kB] Get:127 http://127.0.0.1:12990/debian sid/main amd64 xdg-utils all 1.1.3-2 [74.6 kB] Get:128 http://127.0.0.1:12990/debian sid/main amd64 texlive-base all 2020.20200417-1 [21.5 MB] Get:129 http://127.0.0.1:12990/debian sid/main amd64 texlive-fonts-recommended all 2020.20200417-1 [5002 kB] Get:130 http://127.0.0.1:12990/debian sid/main amd64 texlive-latex-base all 2020.20200417-1 [1058 kB] Get:131 http://127.0.0.1:12990/debian sid/main amd64 texlive-latex-recommended all 2020.20200417-1 [15.7 MB] Get:132 http://127.0.0.1:12990/debian sid/main amd64 texlive-pictures all 2020.20200417-1 [4516 kB] Get:133 http://127.0.0.1:12990/debian sid/main amd64 texlive-latex-extra all 2020.20200417-1 [12.9 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 154 MB in 1s (136 MB/s) Selecting previously unselected package bsdmainutils. (Reading database ... 13685 files and directories currently installed.) Preparing to unpack .../00-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../05-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../06-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package flex. Preparing to unpack .../07-flex_2.6.4-6.2_amd64.deb ... Unpacking flex (2.6.4-6.2) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../08-libssl1.1_1.1.1g-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1g-1) ... Selecting previously unselected package libpython3.8-minimal:amd64. Preparing to unpack .../09-libpython3.8-minimal_3.8.3~rc1-1_amd64.deb ... Unpacking libpython3.8-minimal:amd64 (3.8.3~rc1-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../10-libexpat1_2.2.9-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.9-1) ... Selecting previously unselected package python3.8-minimal. Preparing to unpack .../11-python3.8-minimal_3.8.3~rc1-1_amd64.deb ... Unpacking python3.8-minimal (3.8.3~rc1-1) ... Setting up libssl1.1:amd64 (1.1.1g-1) ... Setting up libpython3.8-minimal:amd64 (3.8.3~rc1-1) ... Setting up libexpat1:amd64 (2.2.9-1) ... Setting up python3.8-minimal (3.8.3~rc1-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 14801 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.8.2-3_amd64.deb ... Unpacking python3-minimal (3.8.2-3) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.64_all.deb ... Unpacking mime-support (3.64) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../2-libmpdec2_2.4.2-3_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.2-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../4-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../5-libsqlite3-0_3.31.1-5_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.31.1-5) ... Selecting previously unselected package libpython3.8-stdlib:amd64. Preparing to unpack .../6-libpython3.8-stdlib_3.8.3~rc1-1_amd64.deb ... Unpacking libpython3.8-stdlib:amd64 (3.8.3~rc1-1) ... Selecting previously unselected package python3.8. Preparing to unpack .../7-python3.8_3.8.3~rc1-1_amd64.deb ... Unpacking python3.8 (3.8.3~rc1-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../8-libpython3-stdlib_3.8.2-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.8.2-3) ... Setting up python3-minimal (3.8.2-3) ... Selecting previously unselected package python3. (Reading database ... 15235 files and directories currently installed.) Preparing to unpack .../000-python3_3.8.2-3_amd64.deb ... Unpacking python3 (3.8.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package ucf. Preparing to unpack .../002-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package tex-common. Preparing to unpack .../003-tex-common_6.14_all.deb ... Unpacking tex-common (6.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.38-4_amd64.deb ... Unpacking libmagic-mgc (1:5.38-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../005-libmagic1_1%3a5.38-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-4) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.38-4_amd64.deb ... Unpacking file (1:5.38-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package autoconf. Preparing to unpack .../008-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../009-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../010-automake_1%3a1.16.2-1_all.deb ... Unpacking automake (1:1.16.2-1) ... Selecting previously unselected package autopoint. Preparing to unpack .../011-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package bison. Preparing to unpack .../012-bison_2%3a3.5.3+dfsg-1_amd64.deb ... Unpacking bison (2:3.5.3+dfsg-1) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../013-d-shlibs_0.91_all.deb ... Unpacking d-shlibs (0.91) ... Selecting previously unselected package libtool. Preparing to unpack .../014-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../015-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../016-libdebhelper-perl_13_all.deb ... Unpacking libdebhelper-perl (13) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../017-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../018-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../019-libfile-stripnondeterminism-perl_1.8.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.8.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../020-dh-strip-nondeterminism_1.8.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.8.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../021-libelf1_0.176-1.1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../022-dwz_0.13-5_amd64.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../023-libglib2.0-0_2.64.2-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.64.2-1) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../024-libicu63_63.2-3_amd64.deb ... Unpacking libicu63:amd64 (63.2-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../025-libxml2_2.9.10+dfsg-5_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-5) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../026-libcroco3_0.6.13-1_amd64.deb ... Unpacking libcroco3:amd64 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../027-gettext_0.19.8.1-10_amd64.deb ... Unpacking gettext (0.19.8.1-10) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../028-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../029-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../030-debhelper_13_all.deb ... Unpacking debhelper (13) ... Selecting previously unselected package libllvm9:amd64. Preparing to unpack .../031-libllvm9_1%3a9.0.1-12_amd64.deb ... Unpacking libllvm9:amd64 (1:9.0.1-12) ... Selecting previously unselected package libclang1-9. Preparing to unpack .../032-libclang1-9_1%3a9.0.1-12_amd64.deb ... Unpacking libclang1-9 (1:9.0.1-12) ... Selecting previously unselected package libxapian30:amd64. Preparing to unpack .../033-libxapian30_1.4.15-1_amd64.deb ... Unpacking libxapian30:amd64 (1.4.15-1) ... Selecting previously unselected package doxygen. Preparing to unpack .../034-doxygen_1.8.17-1_amd64.deb ... Unpacking doxygen (1.8.17-1) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../035-libpng16-16_1.6.37-2_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.37-2) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../036-libfreetype6_2.10.1-2_amd64.deb ... Unpacking libfreetype6:amd64 (2.10.1-2) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../037-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../038-fontconfig-config_2.13.1-4_all.deb ... Unpacking fontconfig-config (2.13.1-4) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../039-libfontconfig1_2.13.1-4_amd64.deb ... Unpacking libfontconfig1:amd64 (2.13.1-4) ... Selecting previously unselected package fontconfig. Preparing to unpack .../040-fontconfig_2.13.1-4_amd64.deb ... Unpacking fontconfig (2.13.1-4) ... Selecting previously unselected package fonts-lmodern. Preparing to unpack .../041-fonts-lmodern_2.004.5-6_all.deb ... Unpacking fonts-lmodern (2.004.5-6) ... Selecting previously unselected package libann0. Preparing to unpack .../042-libann0_1.1.2+doc-7_amd64.deb ... Unpacking libann0 (1.1.2+doc-7) ... Selecting previously unselected package libcdt5:amd64. Preparing to unpack .../043-libcdt5_2.42.2-4_amd64.deb ... Unpacking libcdt5:amd64 (2.42.2-4) ... Selecting previously unselected package libcgraph6:amd64. Preparing to unpack .../044-libcgraph6_2.42.2-4_amd64.deb ... Unpacking libcgraph6:amd64 (2.42.2-4) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../045-libjpeg62-turbo_1%3a1.5.2-2+b1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../046-libjbig0_2.1-3.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1+b2) ... Selecting previously unselected package libwebp6:amd64. Preparing to unpack .../047-libwebp6_0.6.1-2+b1_amd64.deb ... Unpacking libwebp6:amd64 (0.6.1-2+b1) ... Selecting previously unselected package libtiff5:amd64. Preparing to unpack .../048-libtiff5_4.1.0+git191117-2_amd64.deb ... Unpacking libtiff5:amd64 (4.1.0+git191117-2) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../049-libxau6_1%3a1.0.8-1+b2_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.8-1+b2) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../050-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../051-libxcb1_1.14-2_amd64.deb ... Unpacking libxcb1:amd64 (1.14-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../052-libx11-data_2%3a1.6.9-2_all.deb ... Unpacking libx11-data (2:1.6.9-2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../053-libx11-6_2%3a1.6.9-2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.6.9-2) ... Selecting previously unselected package libxpm4:amd64. Preparing to unpack .../054-libxpm4_1%3a3.5.12-1_amd64.deb ... Unpacking libxpm4:amd64 (1:3.5.12-1) ... Selecting previously unselected package libgd3:amd64. Preparing to unpack .../055-libgd3_2.3.0-1_amd64.deb ... Unpacking libgd3:amd64 (2.3.0-1) ... Selecting previously unselected package libgts-0.7-5:amd64. Preparing to unpack .../056-libgts-0.7-5_0.7.6+darcs121130-4+b1_amd64.deb ... Unpacking libgts-0.7-5:amd64 (0.7.6+darcs121130-4+b1) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../057-libpixman-1-0_0.36.0-1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.36.0-1) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../058-libxcb-render0_1.14-2_amd64.deb ... Unpacking libxcb-render0:amd64 (1.14-2) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../059-libxcb-shm0_1.14-2_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.14-2) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../060-libxext6_2%3a1.3.3-1+b2_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.3-1+b2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../061-libxrender1_1%3a0.9.10-1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../062-libcairo2_1.16.0-4_amd64.deb ... Unpacking libcairo2:amd64 (1.16.0-4) ... Selecting previously unselected package libltdl7:amd64. Preparing to unpack .../063-libltdl7_2.4.6-14_amd64.deb ... Unpacking libltdl7:amd64 (2.4.6-14) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../064-libfribidi0_1.0.8-2_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.8-2) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../065-libgraphite2-3_1.3.14-1_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-1) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../066-libharfbuzz0b_2.6.4-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (2.6.4-1) ... Selecting previously unselected package libthai-data. Preparing to unpack .../067-libthai-data_0.1.28-3_all.deb ... Unpacking libthai-data (0.1.28-3) ... Selecting previously unselected package libdatrie1:amd64. Preparing to unpack .../068-libdatrie1_0.2.12-3_amd64.deb ... Unpacking libdatrie1:amd64 (0.2.12-3) ... Selecting previously unselected package libthai0:amd64. Preparing to unpack .../069-libthai0_0.1.28-3_amd64.deb ... Unpacking libthai0:amd64 (0.1.28-3) ... Selecting previously unselected package libpango-1.0-0:amd64. Preparing to unpack .../070-libpango-1.0-0_1.44.7-4_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.44.7-4) ... Selecting previously unselected package libpangoft2-1.0-0:amd64. Preparing to unpack .../071-libpangoft2-1.0-0_1.44.7-4_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.44.7-4) ... Selecting previously unselected package libpangocairo-1.0-0:amd64. Preparing to unpack .../072-libpangocairo-1.0-0_1.44.7-4_amd64.deb ... Unpacking libpangocairo-1.0-0:amd64 (1.44.7-4) ... Selecting previously unselected package libpathplan4:amd64. Preparing to unpack .../073-libpathplan4_2.42.2-4_amd64.deb ... Unpacking libpathplan4:amd64 (2.42.2-4) ... Selecting previously unselected package libgvc6. Preparing to unpack .../074-libgvc6_2.42.2-4_amd64.deb ... Unpacking libgvc6 (2.42.2-4) ... Selecting previously unselected package libgvpr2:amd64. Preparing to unpack .../075-libgvpr2_2.42.2-4_amd64.deb ... Unpacking libgvpr2:amd64 (2.42.2-4) ... Selecting previously unselected package liblab-gamut1:amd64. Preparing to unpack .../076-liblab-gamut1_2.42.2-4_amd64.deb ... Unpacking liblab-gamut1:amd64 (2.42.2-4) ... Selecting previously unselected package x11-common. Preparing to unpack .../077-x11-common_1%3a7.7+20_all.deb ... Unpacking x11-common (1:7.7+20) ... Selecting previously unselected package libice6:amd64. Preparing to unpack .../078-libice6_2%3a1.0.9-2_amd64.deb ... Unpacking libice6:amd64 (2:1.0.9-2) ... Selecting previously unselected package libsm6:amd64. Preparing to unpack .../079-libsm6_2%3a1.2.3-1_amd64.deb ... Unpacking libsm6:amd64 (2:1.2.3-1) ... Selecting previously unselected package libxt6:amd64. Preparing to unpack .../080-libxt6_1%3a1.1.5-1+b3_amd64.deb ... Unpacking libxt6:amd64 (1:1.1.5-1+b3) ... Selecting previously unselected package libxmu6:amd64. Preparing to unpack .../081-libxmu6_2%3a1.1.2-2+b3_amd64.deb ... Unpacking libxmu6:amd64 (2:1.1.2-2+b3) ... Selecting previously unselected package libxaw7:amd64. Preparing to unpack .../082-libxaw7_2%3a1.0.13-1+b2_amd64.deb ... Unpacking libxaw7:amd64 (2:1.0.13-1+b2) ... Selecting previously unselected package graphviz. Preparing to unpack .../083-graphviz_2.42.2-4_amd64.deb ... Unpacking graphviz (2.42.2-4) ... Selecting previously unselected package libapache-pom-java. Preparing to unpack .../084-libapache-pom-java_18-1_all.deb ... Unpacking libapache-pom-java (18-1) ... Selecting previously unselected package libcommons-parent-java. Preparing to unpack .../085-libcommons-parent-java_43-1_all.deb ... Unpacking libcommons-parent-java (43-1) ... Selecting previously unselected package libcommons-logging-java. Preparing to unpack .../086-libcommons-logging-java_1.2-2_all.deb ... Unpacking libcommons-logging-java (1.2-2) ... Selecting previously unselected package libfontbox-java. Preparing to unpack .../087-libfontbox-java_1%3a1.8.16-2_all.deb ... Unpacking libfontbox-java (1:1.8.16-2) ... Selecting previously unselected package libkpathsea6:amd64. Preparing to unpack .../088-libkpathsea6_2020.20200327.54578-4_amd64.deb ... Unpacking libkpathsea6:amd64 (2020.20200327.54578-4) ... Selecting previously unselected package libpaper1:amd64. Preparing to unpack .../089-libpaper1_1.1.28+b1_amd64.deb ... Unpacking libpaper1:amd64 (1.1.28+b1) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../090-libpaper-utils_1.1.28+b1_amd64.deb ... Unpacking libpaper-utils (1.1.28+b1) ... Selecting previously unselected package libpdfbox-java. Preparing to unpack .../091-libpdfbox-java_1%3a1.8.16-2_all.deb ... Unpacking libpdfbox-java (1:1.8.16-2) ... Selecting previously unselected package libptexenc1:amd64. Preparing to unpack .../092-libptexenc1_2020.20200327.54578-4_amd64.deb ... Unpacking libptexenc1:amd64 (2020.20200327.54578-4) ... Selecting previously unselected package librostlab3. Preparing to unpack .../093-librostlab3_1.0.20-10_amd64.deb ... Unpacking librostlab3 (1.0.20-10) ... Selecting previously unselected package librostlab3-dev. Preparing to unpack .../094-librostlab3-dev_1.0.20-10_amd64.deb ... Unpacking librostlab3-dev (1.0.20-10) ... Selecting previously unselected package libsynctex2:amd64. Preparing to unpack .../095-libsynctex2_2020.20200327.54578-4_amd64.deb ... Unpacking libsynctex2:amd64 (2020.20200327.54578-4) ... Selecting previously unselected package libteckit0:amd64. Preparing to unpack .../096-libteckit0_2.5.8+ds2-5_amd64.deb ... Unpacking libteckit0:amd64 (2.5.8+ds2-5) ... Selecting previously unselected package libtexlua53:amd64. Preparing to unpack .../097-libtexlua53_2020.20200327.54578-4_amd64.deb ... Unpacking libtexlua53:amd64 (2020.20200327.54578-4) ... Selecting previously unselected package libtexluajit2:amd64. Preparing to unpack .../098-libtexluajit2_2020.20200327.54578-4_amd64.deb ... Unpacking libtexluajit2:amd64 (2020.20200327.54578-4) ... Selecting previously unselected package libxi6:amd64. Preparing to unpack .../099-libxi6_2%3a1.7.9-1_amd64.deb ... Unpacking libxi6:amd64 (2:1.7.9-1) ... Selecting previously unselected package libzzip-0-13:amd64. Preparing to unpack .../100-libzzip-0-13_0.13.62-3.2_amd64.deb ... Unpacking libzzip-0-13:amd64 (0.13.62-3.2) ... Selecting previously unselected package preview-latex-style. Preparing to unpack .../101-preview-latex-style_11.91-2_all.deb ... Unpacking preview-latex-style (11.91-2) ... Selecting previously unselected package t1utils. Preparing to unpack .../102-t1utils_1.41-4_amd64.deb ... Unpacking t1utils (1.41-4) ... Selecting previously unselected package texlive-binaries. Preparing to unpack .../103-texlive-binaries_2020.20200327.54578-4_amd64.deb ... Unpacking texlive-binaries (2020.20200327.54578-4) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../104-xdg-utils_1.1.3-2_all.deb ... Unpacking xdg-utils (1.1.3-2) ... Selecting previously unselected package texlive-base. Preparing to unpack .../105-texlive-base_2020.20200417-1_all.deb ... Unpacking texlive-base (2020.20200417-1) ... Selecting previously unselected package texlive-fonts-recommended. Preparing to unpack .../106-texlive-fonts-recommended_2020.20200417-1_all.deb ... Unpacking texlive-fonts-recommended (2020.20200417-1) ... Selecting previously unselected package texlive-latex-base. Preparing to unpack .../107-texlive-latex-base_2020.20200417-1_all.deb ... Unpacking texlive-latex-base (2020.20200417-1) ... Selecting previously unselected package texlive-latex-recommended. Preparing to unpack .../108-texlive-latex-recommended_2020.20200417-1_all.deb ... Unpacking texlive-latex-recommended (2020.20200417-1) ... Selecting previously unselected package texlive-pictures. Preparing to unpack .../109-texlive-pictures_2020.20200417-1_all.deb ... Unpacking texlive-pictures (2020.20200417-1) ... Selecting previously unselected package texlive-latex-extra. Preparing to unpack .../110-texlive-latex-extra_2020.20200417-1_all.deb ... Unpacking texlive-latex-extra (2020.20200417-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../111-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up libgraphite2-3:amd64 (1.3.14-1) ... Setting up libpixman-1-0:amd64 (0.36.0-1) ... Setting up libxapian30:amd64 (1.4.15-1) ... Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.14-2) ... Setting up mime-support (3.64) ... Setting up libdatrie1:amd64 (0.2.12-3) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libtexlua53:amd64 (2020.20200327.54578-4) ... Setting up libxcb-render0:amd64 (1.14-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.64.2-1) ... No schema files found: doing nothing. Setting up libtexluajit2:amd64 (2020.20200327.54578-4) ... Setting up libdebhelper-perl (13) ... Setting up libfontbox-java (1:1.8.16-2) ... Setting up libsqlite3-0:amd64 (3.31.1-5) ... Setting up liblab-gamut1:amd64 (2.42.2-4) ... Setting up x11-common (1:7.7+20) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libmagic1:amd64 (1:5.38-4) ... Setting up gettext-base (0.19.8.1-10) ... Setting up libxcb-shm0:amd64 (1.14-2) ... Setting up libzzip-0-13:amd64 (0.13.62-3.2) ... Setting up file (1:5.38-4) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libicu63:amd64 (63.2-3) ... Setting up libgts-0.7-5:amd64 (0.7.6+darcs121130-4+b1) ... Setting up autotools-dev (20180224.1) ... Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Setting up libx11-data (2:1.6.9-2) ... Setting up libteckit0:amd64 (2.5.8+ds2-5) ... Setting up libpathplan4:amd64 (2.42.2-4) ... Setting up libapache-pom-java (18-1) ... Setting up libann0 (1.1.2+doc-7) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libfribidi0:amd64 (1.0.8-2) ... Setting up t1utils (1.41-4) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libpng16-16:amd64 (1.6.37-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up libwebp6:amd64 (0.6.1-2+b1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up d-shlibs (0.91) ... Setting up libltdl7:amd64 (2.4.6-14) ... Setting up libkpathsea6:amd64 (2020.20200327.54578-4) ... Setting up librostlab3 (1.0.20-10) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up fonts-lmodern (2.004.5-6) ... Setting up libsub-override-perl (0.09-2) ... Setting up libx11-6:amd64 (2:1.6.9-2) ... Setting up libthai-data (0.1.28-3) ... Setting up libcdt5:amd64 (2.42.2-4) ... Setting up libcgraph6:amd64 (2.42.2-4) ... Setting up libtiff5:amd64 (4.1.0+git191117-2) ... Setting up libmpdec2:amd64 (2.4.2-3) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up readline-common (8.0-4) ... Setting up libxml2:amd64 (2.9.10+dfsg-5) ... Setting up xdg-utils (1.1.3-2) ... Setting up libllvm9:amd64 (1:9.0.1-12) ... Setting up libsynctex2:amd64 (2020.20200327.54578-4) ... Setting up libfile-stripnondeterminism-perl (1.8.0-1) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libpdfbox-java (1:1.8.16-2) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libtool (2.4.6-14) ... Setting up libclang1-9 (1:9.0.1-12) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libcommons-parent-java (43-1) ... Setting up libcommons-logging-java (1.2-2) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up m4 (1.4.18-4) ... Setting up librostlab3-dev (1.0.20-10) ... Setting up libthai0:amd64 (0.1.28-3) ... Setting up doxygen (1.8.17-1) ... Setting up libptexenc1:amd64 (2020.20200327.54578-4) ... Setting up libfreetype6:amd64 (2.10.1-2) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.8.0-1) ... Setting up libgvpr2:amd64 (2.42.2-4) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up bison (2:3.5.3+dfsg-1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up libharfbuzz0b:amd64 (2.6.4-1) ... Setting up libpython3.8-stdlib:amd64 (3.8.3~rc1-1) ... Setting up python3.8 (3.8.3~rc1-1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libpython3-stdlib:amd64 (3.8.2-3) ... Setting up automake (1:1.16.2-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpaper1:amd64 (1.1.28+b1) ... Creating config file /etc/papersize with new version Setting up flex (2.6.4-6.2) ... Setting up gettext (0.19.8.1-10) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up fontconfig-config (2.13.1-4) ... Setting up python3 (3.8.2-3) ... Setting up libpaper-utils (1.1.28+b1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up tex-common (6.14) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libxt6:amd64 (1:1.1.5-1+b3) ... Setting up libfontconfig1:amd64 (2.13.1-4) ... Setting up fontconfig (2.13.1-4) ... Regenerating fonts cache... done. Setting up libxmu6:amd64 (2:1.1.2-2+b3) ... Setting up po-debconf (1.0.21) ... Setting up preview-latex-style (11.91-2) ... Setting up libpango-1.0-0:amd64 (1.44.7-4) ... Setting up libxaw7:amd64 (2:1.0.13-1+b2) ... Setting up libcairo2:amd64 (1.16.0-4) ... Setting up libgd3:amd64 (2.3.0-1) ... Setting up texlive-binaries (2020.20200327.54578-4) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libpangoft2-1.0-0:amd64 (1.44.7-4) ... Setting up texlive-base (2020.20200417-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex Setting up libpangocairo-1.0-0:amd64 (1.44.7-4) ... Setting up texlive-latex-base (2020.20200417-1) ... Setting up texlive-latex-recommended (2020.20200417-1) ... Setting up libgvc6 (2.42.2-4) ... Setting up texlive-pictures (2020.20200417-1) ... Setting up texlive-fonts-recommended (2020.20200417-1) ... Setting up graphviz (2.42.2-4) ... Setting up texlive-latex-extra (2020.20200417-1) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.30-4) ... Processing triggers for tex-common (6.14) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-cloud-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-6 dpkg-dev_1.19.7 g++-9_9.3.0-11 gcc-9_9.3.0-11 libc6-dev_2.30-4 libstdc++-9-dev_9.3.0-11 libstdc++6_10-20200502-1 linux-libc-dev_5.6.7-1 Package versions: adduser_3.118 apt_2.0.2 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-6 binutils-common_2.34-6 binutils-x86-64-linux-gnu_2.34-6 bison_2:3.5.3+dfsg-1 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 clang-10_1:10.0.0-4 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-9_9.3.0-11 d-shlibs_0.91 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.8.0-1 diffutils_1:3.7-3 doxygen_1.8.17-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 flex_2.6.4-6.2 fontconfig_2.13.1-4 fontconfig-config_2.13.1-4 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 g++_4:9.2.1-3.1 g++-9_9.3.0-11 gcc_4:9.2.1-3.1 gcc-10-base_10-20200502-1 gcc-9_9.3.0-11 gcc-9-base_9.3.0-11 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 graphviz_2.42.2-4 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 lib32gcc-s1_10-20200502-1 lib32gcc1_1:10-20200502-1 lib32stdc++6_10-20200502-1 libacl1_2.2.53-8 libann0_1.1.2+doc-7 libapache-pom-java_18-1 libapt-pkg6.0_2.0.2 libarchive-zip-perl_1.68-1 libasan5_9.3.0-11 libatomic1_10-20200502-1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.34-6 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-4 libc-dev-bin_2.30-4 libc6_2.30-4 libc6-dev_2.30-4 libc6-i386_2.30-4 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1+b2 libcc1-0_10-20200502-1 libcdt5_2.42.2-4 libcgraph6_2.42.2-4 libclang-common-10-dev_1:10.0.0-4 libclang-cpp10_1:10.0.0-4 libclang1-10_1:10.0.0-4 libclang1-9_1:9.0.1-12 libcom-err2_1.45.6-1 libcommons-logging-java_1.2-2 libcommons-parent-java_43-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-6 libctf0_2.34-6 libdatrie1_0.2.12-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_13 libdpkg-perl_1.19.7 libedit2_3.1-20191231-1 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.8.0-1 libfontbox-java_1:1.8.16-2 libfontconfig1_2.13.1-4 libfreetype6_2.10.1-2 libfribidi0_1.0.8-2 libgc1c2_1:7.6.4-0.4 libgcc-9-dev_9.3.0-11 libgcc-s1_10-20200502-1 libgcrypt20_1.8.5-5 libgd3_2.3.0-1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.2-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10-20200502-1 libgpg-error0_1.37-1 libgraphite2-3_1.3.14-1 libgts-0.7-5_0.7.6+darcs121130-4+b1 libgvc6_2.42.2-4 libgvpr2_2.42.2-4 libharfbuzz0b_2.6.4-1 libhogweed5_3.5.1+really3.5.1-2 libice6_2:1.0.9-2 libicu63_63.2-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libitm1_10-20200502-1 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:1.5.2-2+b1 libkpathsea6_2020.20200327.54578-4 liblab-gamut1_2.42.2-4 libllvm10_1:10.0.0-4 libllvm9_1:9.0.1-12 liblsan0_10-20200502-1 libltdl7_2.4.6-14 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libobjc-9-dev_9.3.0-11 libobjc4_10-20200502-1 libomp-10-dev_1:10.0.0-4 libomp5-10_1:10.0.0-4 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.44.7-4 libpangocairo-1.0-0_1.44.7-4 libpangoft2-1.0-0_1.44.7-4 libpaper-utils_1.1.28+b1 libpaper1_1.1.28+b1 libpathplan4_2.42.2-4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libpdfbox-java_1:1.8.16-2 libperl5.30_5.30.0-10 libpipeline1_1.5.2-2 libpixman-1-0_0.36.0-1 libpng16-16_1.6.37-2 libptexenc1_2020.20200327.54578-4 libpython3-stdlib_3.8.2-3 libpython3.8-minimal_3.8.3~rc1-1 libpython3.8-stdlib_3.8.3~rc1-1 libquadmath0_10-20200502-1 libreadline8_8.0-4 librostlab3_1.0.20-10 librostlab3-dev_1.0.20-10 libseccomp2_2.4.3-1+b1 libselinux1_3.0-1+b3 libsemanage-common_3.0-1 libsemanage1_3.0-1+b3 libsepol1_3.0-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1 libsqlite3-0_3.31.1-5 libss2_1.45.6-1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-11 libstdc++6_10-20200502-1 libsub-override-perl_0.09-2 libsynctex2_2020.20200327.54578-4 libsystemd0_245.5-2 libtasn1-6_4.16.0-2 libteckit0_2.5.8+ds2-5 libtexlua53_2020.20200327.54578-4 libtexluajit2_2020.20200327.54578-4 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10-20200502-1 libubsan1_10-20200502-1 libuchardet0_0.0.6-3 libudev1_245.5-2 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libwebp6_0.6.1-2+b1 libx11-6_2:1.6.9-2 libx11-data_2:1.6.9-2 libxapian30_1.4.15-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.14-2 libxcb-shm0_1.14-2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml2_2.9.10+dfsg-5 libxmu6_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1+b3 libz3-4_4.8.7-4 libzstd1_1.4.4+dfsg-3 libzzip-0-13_0.13.62-3.2 linux-libc-dev_5.6.7-1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.3 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.34-0.1 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-10 perl-base_5.30.0-10 perl-modules-5.30_5.30.0-10 po-debconf_1.0.21 preview-latex-style_11.91-2 python3_3.8.2-3 python3-minimal_3.8.2-3 python3.8_3.8.3~rc1-1 python3.8-minimal_3.8.3~rc1-1 qt5-qmake_5.12.5+dfsg-10 qt5-qmake-bin_5.12.5+dfsg-10 qtchooser_66-2 readline-common_8.0-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 t1utils_1.41-4 tar_1.30+dfsg-7 tex-common_6.14 texlive-base_2020.20200417-1 texlive-binaries_2020.20200327.54578-4 texlive-fonts-recommended_2020.20200417-1 texlive-latex-base_2020.20200417-1 texlive-latex-extra_2020.20200417-1 texlive-latex-recommended_2020.20200417-1 texlive-pictures_2020.20200417-1 tzdata_2020a-1 ucf_3.0038+nmu1 util-linux_2.34-0.1 x11-common_1:7.7+20 xdg-utils_1.1.3-2 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: librostlab-blast Binary: librostlab-blast0v5, librostlab-blast0-dev, librostlab-blast-doc Architecture: any all Version: 1.0.1-10 Maintainer: Debian Med Packaging Team Uploaders: Laszlo Kajan , Andreas Tille Homepage: http://rostlab.org/ Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/librostlab-blast Vcs-Git: https://salsa.debian.org/med-team/librostlab-blast.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper (>= 11~), d-shlibs, bison, doxygen, flex, graphviz, texlive-latex-recommended, librostlab-dev, texlive-fonts-recommended, texlive-latex-extra Package-List: librostlab-blast-doc deb doc optional arch=all librostlab-blast0-dev deb libdevel optional arch=any librostlab-blast0v5 deb libs optional arch=any Checksums-Sha1: 5b5cff416807dae2daad3d17540c7fa70bb8bc70 384023 librostlab-blast_1.0.1.orig.tar.gz eda1e2bc975447c0ce59dfc2daa4d64a4b72d381 5280 librostlab-blast_1.0.1-10.debian.tar.xz Checksums-Sha256: 7c0a0181253b3006585b7ffb755fb9720181e70d91dd25ec511b5d88bd6ece45 384023 librostlab-blast_1.0.1.orig.tar.gz fec96d3dff7a7e06db71fdd36f7b09514af5021b007dc836c8a5907504f97863 5280 librostlab-blast_1.0.1-10.debian.tar.xz Files: da93e9eed00ac33083748462b50f673f 384023 librostlab-blast_1.0.1.orig.tar.gz ed9392a2fb5727803cda565337b19b32 5280 librostlab-blast_1.0.1-10.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlyPalkRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGOHRAAlkZj1zdVkyK6gwi4kdnxhS4WIwR2yuJv qpw+NNfzhsYJwTFLz6g3zeGwenUJ8mNxnYxVCldbMJrvKYeqCr6Fr3jyZoyeVS2+ haMmmkAok431GoiZ4lGsmDHjIe/drZKVbRnJE74IWOGM6lO7ft923gOe4BvPW2db cG7Zbbt+Wkan5VirkG93SkCWP7cqBxycAYkdn0KU1kVTVB9eIKTVomdgyl5HPC48 rnJWDqJLUagjQlT1vcaGGutCGywOMfNxJ9+e1iUUZjh1FQ88DrDQaVg/oIWp0eyc mMrI8+kUEKo7Z5xw6zuY/XDYMFM24t5aZyBjOsrYW9AKfuplyFQX/Xsbyab5v0/J kw7ysBtQY03CzigYjAGIwx0B/3LTnaxYLd+jRun7Bs5U+lGPBPk8YZSJYVj5jrDc sZGTBGD3APY8jOJSzVbeYBDrU8d+OcItwrgwFCA9rn6265GZHDYvZU1L6rm5m9Dv C+gCBWEKxZTnWpf5+xOttCqNGTGyfbdRiVKmg6H2xl2PlVuND9YOIZKDsl+Xl8jZ bNL+lZnDwpxqU272Dz8CS65FnKlDYR1cuaer4+Qf6i85LYwNdmqTXfVHvdEmOZ5S gxk4W6KgHrcVr4VIrai2SN0rBkiy+7yJZnZ9Ayfn+ZmFPTSZtkwysDKgP0dIfVEW zJhoOvn6jWw= =1pcC -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Mar 18 09:52:25 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./librostlab-blast_1.0.1-10.dsc dpkg-source: info: extracting librostlab-blast in /<> dpkg-source: info: unpacking librostlab-blast_1.0.1.orig.tar.gz dpkg-source: info: unpacking librostlab-blast_1.0.1-10.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying reproducible.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=sid-amd64-sbuild-9702b404-6976-4227-a7ef-fee742917f13 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -b -rfakeroot dpkg-buildpackage: info: source package librostlab-blast dpkg-buildpackage: info: source version 1.0.1-10 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean rm -f lib/librostlab-blast.tag make[1]: Leaving directory '/<>' dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:7: installing './compile' configure.ac:5: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --enable-doxygen-dot --enable-doxygen-pdf=No ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-dot --enable-doxygen-pdf=No configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for bison... bison -y checking for flex... flex checking lex output file root... lex.yy checking lex library... none needed checking whether yytext is a pointer... no checking rostlab/aux_functions.h usability... yes checking rostlab/aux_functions.h presence... yes checking for rostlab/aux_functions.h... yes checking rostlab/rostlab_stdexcept.h usability... yes checking rostlab/rostlab_stdexcept.h presence... yes checking for rostlab/rostlab_stdexcept.h... yes checking for doxygen... /usr/bin/doxygen checking for perl... /usr/bin/perl checking for dot... /usr/bin/dot checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating lib/Doxyfile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j4 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in lib make[4]: Entering directory '/<>/lib' mkdir -p rostlab /bin/bash ../ylwrap blast-parser-scanner.lpp lex.yy.c blast-parser-scanner.cpp -- flex /bin/bash ../ylwrap blast-parser-parser.ypp y.tab.c blast-parser-parser.cpp y.tab.h rostlab/blast-parser-parser.h y.output blast-parser-parser.output stack.hh rostlab/blast-parser-stack.h location.hh rostlab/blast-parser-location.h position.hh rostlab/blast-parser-position.h -- bison -y /<>/lib/blast-parser-parser.ypp:1.1-9: warning: POSIX Yacc does not support %skeleton [-Wyacc] 1 | %skeleton "lalr1.cc" | ^~~~~~~~~ /<>/lib/blast-parser-parser.ypp:1.11-20: warning: POSIX Yacc does not support string literals [-Wyacc] 1 | %skeleton "lalr1.cc" | ^~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:20.1-8: warning: POSIX Yacc does not support %require [-Wyacc] 20 | %require "2.4.1" | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:20.10-16: warning: POSIX Yacc does not support string literals [-Wyacc] 20 | %require "2.4.1" | ^~~~~~~ /<>/lib/blast-parser-parser.ypp:21.1-8: warning: POSIX Yacc does not support %defines [-Wyacc] 21 | %defines | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:22.1-7: warning: POSIX Yacc does not support %define [-Wyacc] 22 | %define namespace "rostlab::blast" | ^~~~~~~ /<>/lib/blast-parser-parser.ypp:22.19-34: warning: POSIX Yacc does not support string literals [-Wyacc] 22 | %define namespace "rostlab::blast" | ^~~~~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:22.1-34: warning: deprecated directive: ‘%define namespace "rostlab::blast"’, use ‘%define api.namespace {rostlab::blast}’ [-Wdeprecated] 22 | %define namespace "rostlab::blast" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | %define api.namespace {rostlab::blast} /<>/lib/blast-parser-parser.ypp:24.1-5: warning: POSIX Yacc does not support %code [-Wyacc] 24 | %code requires { | ^~~~~ /<>/lib/blast-parser-parser.ypp:37.1-14: warning: POSIX Yacc does not support %error-verbose [-Wyacc] 37 | %error-verbose | ^~~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:37.1-14: warning: deprecated directive: ‘%error-verbose’, use ‘%define parse.error verbose’ [-Wdeprecated] 37 | %error-verbose | ^~~~~~~~~~~~~~ | %define parse.error verbose /<>/lib/blast-parser-parser.ypp:39.1-15: warning: POSIX Yacc does not support %initial-action [-Wyacc] 39 | %initial-action | ^~~~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:53.1-5: warning: POSIX Yacc does not support %code [-Wyacc] 53 | %code { | ^~~~~ /<>/lib/blast-parser-parser.ypp:59.29-41: warning: POSIX Yacc does not support string literals [-Wyacc] 59 | %token END 0 "end of file" | ^~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:72.29-36: warning: POSIX Yacc does not support string literals [-Wyacc] 72 | %token QUERYEQ "Query=" | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:73.29-39: warning: POSIX Yacc does not support string literals [-Wyacc] 73 | %token DATABASECOLON "Database:" | ^~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:74.29-48: warning: POSIX Yacc does not support string literals [-Wyacc] 74 | %token RESFROMROUND "Results from round" | ^~~~~~~~~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:75.29-37: warning: POSIX Yacc does not support string literals [-Wyacc] 75 | %token SCOREEQ "Score =" | ^~~~~~~~~ /<>/lib/blast-parser-parser.ypp:76.29-38: warning: POSIX Yacc does not support string literals [-Wyacc] 76 | %token EXPECTEQ "Expect =" | ^~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:77.29-37: warning: POSIX Yacc does not support string literals [-Wyacc] 77 | %token METHODCOLON "Method:" | ^~~~~~~~~ /<>/lib/blast-parser-parser.ypp:78.29-42: warning: POSIX Yacc does not support string literals [-Wyacc] 78 | %token IDENTITIESEQ "Identities =" | ^~~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:79.29-41: warning: POSIX Yacc does not support string literals [-Wyacc] 79 | %token POSITIVESEQ "Positives =" | ^~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:80.29-36: warning: POSIX Yacc does not support string literals [-Wyacc] 80 | %token GAPSEQ "Gaps =" | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:81.29-38: warning: POSIX Yacc does not support string literals [-Wyacc] 81 | %token STRANDEQ "Strand =" | ^~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:82.29-37: warning: POSIX Yacc does not support string literals [-Wyacc] 82 | %token FRAMEEQ "Frame =" | ^~~~~~~~~ /<>/lib/blast-parser-parser.ypp:83.29-36: warning: POSIX Yacc does not support string literals [-Wyacc] 83 | %token QUERYCOLON "Query:" | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:84.29-36: warning: POSIX Yacc does not support string literals [-Wyacc] 84 | %token SBJCTCOLON "Sbjct:" | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:88.1-11: warning: POSIX Yacc does not support %destructor [-Wyacc] 88 | %destructor { delete $$; } | ^~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:90.1-8: warning: POSIX Yacc does not support %printer [-Wyacc] 90 | %printer { debug_stream () << *$$; } | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:91.1-8: warning: POSIX Yacc does not support %printer [-Wyacc] 91 | %printer { debug_stream () << $$; } | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:109.9-16: warning: POSIX Yacc does not support string literals [-Wyacc] 109 | query: "Query=" STRING INT | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:122.11-21: warning: POSIX Yacc does not support string literals [-Wyacc] 122 | database: "Database:" STRING INT INT | ^~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:137.15-34: warning: POSIX Yacc does not support string literals [-Wyacc] 137 | | "Results from round" INT | ^~~~~~~~~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:201.19-27: warning: POSIX Yacc does not support string literals [-Wyacc] 201 | hsp_headerfield: "Score =" num INT | ^~~~~~~~~ /<>/lib/blast-parser-parser.ypp:203.19-28: warning: POSIX Yacc does not support string literals [-Wyacc] 203 | | "Expect =" num | ^~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:205.19-27: warning: POSIX Yacc does not support string literals [-Wyacc] 205 | | "Method:" STRING | ^~~~~~~~~ /<>/lib/blast-parser-parser.ypp:207.19-32: warning: POSIX Yacc does not support string literals [-Wyacc] 207 | | "Identities =" INT | ^~~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:209.19-31: warning: POSIX Yacc does not support string literals [-Wyacc] 209 | | "Positives =" INT | ^~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:211.19-26: warning: POSIX Yacc does not support string literals [-Wyacc] 211 | | "Gaps =" INT | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:213.19-28: warning: POSIX Yacc does not support string literals [-Wyacc] 213 | | "Strand =" STRING '/' STRING | ^~~~~~~~~~ /<>/lib/blast-parser-parser.ypp:215.19-27: warning: POSIX Yacc does not support string literals [-Wyacc] 215 | | "Frame =" INT '/' INT | ^~~~~~~~~ /<>/lib/blast-parser-parser.ypp:217.19-27: warning: POSIX Yacc does not support string literals [-Wyacc] 217 | | "Frame =" INT | ^~~~~~~~~ /<>/lib/blast-parser-parser.ypp:224.15-22: warning: POSIX Yacc does not support string literals [-Wyacc] 224 | alitriple: "Query:" INT STRING INT STRING "Sbjct:" INT STRING INT | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:224.46-53: warning: POSIX Yacc does not support string literals [-Wyacc] 224 | alitriple: "Query:" INT STRING INT STRING "Sbjct:" INT STRING INT | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:247.15-22: warning: POSIX Yacc does not support string literals [-Wyacc] 247 | | "Query:" '0' /* bug as far as I can tell */ | ^~~~~~~~ /<>/lib/blast-parser-parser.ypp:22.1-34: warning: %define variable 'api.namespace' requires '{...}' values [-Wdeprecated] 22 | %define namespace "rostlab::blast" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/lib/blast-parser-parser.ypp: warning: fix-its can be applied. Rerun with option '--update'. [-Wother] updating rostlab/blast-parser-location.h updating rostlab/blast-parser-position.h updating rostlab/blast-parser-stack.h updating rostlab/blast-parser-parser.h sed -i -e 's,\by.tab.h\b,rostlab/blast-parser-parser.h,g' blast-parser-parser.cpp sed -i -e 's,\bstack.hh\b,rostlab/blast-parser-stack.h,g;s,\blocation.hh\b,rostlab/blast-parser-location.h,g;' rostlab/blast-parser-parser.h sed -i -e 's,\bposition.hh\b,rostlab/blast-parser-position.h,g;' rostlab/blast-parser-location.h make all-am make[5]: Entering directory '/<>/lib' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-blast-parser-driver.lo `test -f 'blast-parser-driver.cpp' || echo './'`blast-parser-driver.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-blast-parser-parser.lo `test -f 'blast-parser-parser.cpp' || echo './'`blast-parser-parser.cpp \ \ /bin/bash ../ylwrap `test -f 'blast-parser-scanner.lpp' || echo './'`blast-parser-scanner.lpp lex.yy.c librostlab_blast_la-blast-parser-scanner.cpp -- flex -Cfe libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-driver.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-blast-parser-driver.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-parser.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-blast-parser-parser.o In file included from blast-parser-driver.cpp:19: ./rostlab/blast-parser-driver.h:61:12: warning: use of enumeration in a nested name specifier is a C++11 extension [-Wc++11-extensions] friend YY_DECL_FRIEND; ^ ./rostlab/blast-parser-driver.h:39:27: note: expanded from macro 'YY_DECL_FRIEND' rostlab::blast::parser::token_type \ ^ ./rostlab/blast-parser-driver.h:61:12: error: C++ requires a type specifier for all declarations friend YY_DECL_FRIEND; ~~~~~~ ^ ./rostlab/blast-parser-driver.h:40:5: note: expanded from macro 'YY_DECL_FRIEND' ::yylex( rostlab::blast::parser::semantic_type* __yylval, \ ^ In file included from blast-parser-parser.ypp:54: ./rostlab/blast-parser-driver.h:61:12: warning: use of enumeration in a nested name specifier is a C++11 extension [-Wc++11-extensions] friend YY_DECL_FRIEND; ^ ./rostlab/blast-parser-driver.h:39:27: note: expanded from macro 'YY_DECL_FRIEND' rostlab::blast::parser::token_type \ ^ ./rostlab/blast-parser-driver.h:61:12: error: C++ requires a type specifier for all declarations friend YY_DECL_FRIEND; ~~~~~~ ^ ./rostlab/blast-parser-driver.h:40:5: note: expanded from macro 'YY_DECL_FRIEND' ::yylex( rostlab::blast::parser::semantic_type* __yylval, \ ^ In file included from blast-parser-driver.cpp:19: In file included from ./rostlab/blast-parser-driver.h:26: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:237:90: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here __os << "n = " << __r.name << " d = " << __r.desc << " Length = " << __r.length << " " << __r.hsps; ^ ./rostlab/blast-result.h:224:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::hsp& __r ) ^ In file included from blast-parser-driver.cpp:19: In file included from ./rostlab/blast-parser-driver.h:26: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:245:87: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here __os << __r.blast_version << "\n\nreferences: " << __r.references << "\n\nrounds: " << __r.rounds << "\n\nn = " << __r.q_name << " d = " << __r.q_desc << " (" << __r.q_length << ^ ./rostlab/blast-result.h:208:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::round& __r ) ^ In file included from blast-parser-driver.cpp:19: In file included from ./rostlab/blast-parser-driver.h:26: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:246:143: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here " letters)\n\nDatabase: " << __r.db_name << " " << __r.db_nseq << " sequences; " << __r.db_nletter << " total letters\n\none-line desc: " << __r.onelines << "\n\n" << ^ ./rostlab/blast-result.h:216:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::oneline& __r ) ^ In file included from blast-parser-driver.cpp:19: In file included from ./rostlab/blast-parser-driver.h:26: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:247:59: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here ( __r.converged ? "CONVERGED!\n\n" : "" ) << "hits: " << __r.hits << "\n\n" << __r.tail; ^ ./rostlab/blast-result.h:235:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::hit& __r ) ^ 1 warning and 5 errors generated. In file included from blast-parser-parser.cpp:40: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:237:90: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here __os << "n = " << __r.name << " d = " << __r.desc << " Length = " << __r.length << " " << __r.hsps; ^ ./rostlab/blast-result.h:224:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::hsp& __r ) ^ make[5]: *** [Makefile:560: librostlab_blast_la-blast-parser-driver.lo] Error 1 make[5]: *** Waiting for unfinished jobs.... In file included from blast-parser-parser.cpp:40: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:245:87: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here __os << __r.blast_version << "\n\nreferences: " << __r.references << "\n\nrounds: " << __r.rounds << "\n\nn = " << __r.q_name << " d = " << __r.q_desc << " (" << __r.q_length << ^ ./rostlab/blast-result.h:208:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::round& __r ) ^ In file included from blast-parser-parser.cpp:40: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:246:143: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here " letters)\n\nDatabase: " << __r.db_name << " " << __r.db_nseq << " sequences; " << __r.db_nletter << " total letters\n\none-line desc: " << __r.onelines << "\n\n" << ^ ./rostlab/blast-result.h:216:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::oneline& __r ) ^ In file included from blast-parser-parser.cpp:40: In file included from blast-parser-parser.ypp:26: In file included from ./rostlab/blast-result.h:25: /usr/include/rostlab/aux_functions.h:186:43: error: call to function 'operator<<' that is neither visible in the template definition nor found by argument-dependent lookup { if( v_i != v.begin() ) os << ", "; os << *v_i; } ^ ./rostlab/blast-result.h:247:59: note: in instantiation of function template specialization 'rostlab::operator<< >' requested here ( __r.converged ? "CONVERGED!\n\n" : "" ) << "hits: " << __r.hits << "\n\n" << __r.tail; ^ ./rostlab/blast-result.h:235:19: note: 'operator<<' should be declared prior to the call site or in namespace 'rostlab::blast' std::ostream& operator<<( std::ostream& __os, const rostlab::blast::hit& __r ) ^ 1 warning and 5 errors generated. make[5]: *** [Makefile:567: librostlab_blast_la-blast-parser-parser.lo] Error 1 make[5]: Leaving directory '/<>/lib' make[4]: *** [Makefile:444: all] Error 2 make[4]: Leaving directory '/<>/lib' make[3]: *** [Makefile:482: all-recursive] Error 1 make[3]: Leaving directory '/<>' make[2]: *** [Makefile:393: all] Error 2 make[2]: Leaving directory '/<>' dh_auto_build: error: make -j4 returned exit code 2 make[1]: *** [debian/rules:25: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:11: build] Error 2 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2020-05-03T04:59:55Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: 9000 Build-Time: 12 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 39 Job: librostlab-blast_1.0.1-10 Machine Architecture: amd64 Package: librostlab-blast Package-Time: 66 Source-Version: 1.0.1-10 Space: 9000 Status: attempted Version: 1.0.1-10 -------------------------------------------------------------------------------- Finished at 2020-05-03T04:59:55Z Build needed 00:01:06, 9000k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 67.045127898s