DC-Build-Header: snap-aligner 1.0~beta.18+dfsg-4 / 2020-10-29 19:52:58 +0000 DC-Task: type:rebuild-binarch-only source:snap-aligner version:1.0~beta.18+dfsg-4 chroot:unstable esttime:92 logfile:/tmp/snap-aligner_1.0~beta.18+dfsg-4_unstable_clang11.log modes:clang11:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --no-run-lintian --chroot-setup-commands=/tmp/clang11 snap-aligner_1.0~beta.18+dfsg-4' sbuild (Debian sbuild) 0.78.1 (09 February 2019) on ip-172-31-14-224.eu-central-1.compute.internal +==============================================================================+ | snap-aligner 1.0~beta.18+dfsg-4 (amd64) Thu, 29 Oct 2020 19:52:58 +0000 | +==============================================================================+ Package: snap-aligner Version: 1.0~beta.18+dfsg-4 Source Version: 1.0~beta.18+dfsg-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-db9687d5-1cd1-4de2-aa7f-69b2665bf475' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang11 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=10 + echo 'Install of clang-10' Install of clang-10 + apt-get update Get:1 http://127.0.0.1:12990/debian sid InRelease [146 kB] Get:2 http://127.0.0.1:12990/debian sid/main Sources.diff/Index [734 B] Ign:2 http://127.0.0.1:12990/debian sid/main Sources.diff/Index Get:3 http://127.0.0.1:12990/debian sid/main amd64 Packages.diff/Index [734 B] Ign:3 http://127.0.0.1:12990/debian sid/main amd64 Packages.diff/Index Get:4 http://127.0.0.1:12990/debian sid/main Translation-en [6391 kB] Get:5 http://127.0.0.1:12990/debian sid/main Sources [8989 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 Packages [8492 kB] Fetched 24.0 MB in 3s (6997 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-10 libomp-10-dev libobjc-9-dev Reading package lists... Building dependency tree... The following additional packages will be installed: lib32gcc-s1 lib32stdc++6 libasan5 libbsd0 libc6-i386 libclang-common-10-dev libclang-cpp10 libclang1-10 libedit2 libgc1 libgcc-9-dev libllvm10 libobjc-10-dev libobjc4 libomp5-10 libz3-4 Suggested packages: clang-10-doc libomp-10-doc Recommended packages: llvm-10-dev python3 The following NEW packages will be installed: clang-10 lib32gcc-s1 lib32stdc++6 libasan5 libbsd0 libc6-i386 libclang-common-10-dev libclang-cpp10 libclang1-10 libedit2 libgc1 libgcc-9-dev libllvm10 libobjc-10-dev libobjc-9-dev libobjc4 libomp-10-dev libomp5-10 libz3-4 0 upgraded, 19 newly installed, 0 to remove and 1 not upgraded. Need to get 52.3 MB of archives. After this operation, 274 MB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:2 http://127.0.0.1:12990/debian sid/main amd64 libedit2 amd64 3.1-20191231-1 [95.4 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libz3-4 amd64 4.8.9-1 [6783 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 libllvm10 amd64 1:10.0.1-7 [16.6 MB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libclang-cpp10 amd64 1:10.0.1-7 [9069 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 libgc1 amd64 1:8.0.4-2.1 [239 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 libobjc4 amd64 10.2.0-15 [41.6 kB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 libobjc-10-dev amd64 10.2.0-15 [170 kB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 libc6-i386 amd64 2.31-4 [2815 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 lib32gcc-s1 amd64 10.2.0-15 [49.4 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 lib32stdc++6 amd64 10.2.0-15 [511 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 libclang-common-10-dev amd64 1:10.0.1-7 [5062 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 libclang1-10 amd64 1:10.0.1-7 [7293 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 clang-10 amd64 1:10.0.1-7 [106 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 libasan5 amd64 9.3.0-18 [390 kB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 libgcc-9-dev amd64 9.3.0-18 [2347 kB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 libobjc-9-dev amd64 9.3.0-18 [220 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 libomp5-10 amd64 1:10.0.1-7 [339 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libomp-10-dev amd64 1:10.0.1-7 [86.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 52.3 MB in 0s (142 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12312 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../01-libedit2_3.1-20191231-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20191231-1) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../02-libz3-4_4.8.9-1_amd64.deb ... Unpacking libz3-4:amd64 (4.8.9-1) ... Selecting previously unselected package libllvm10:amd64. Preparing to unpack .../03-libllvm10_1%3a10.0.1-7_amd64.deb ... Unpacking libllvm10:amd64 (1:10.0.1-7) ... Selecting previously unselected package libclang-cpp10. Preparing to unpack .../04-libclang-cpp10_1%3a10.0.1-7_amd64.deb ... Unpacking libclang-cpp10 (1:10.0.1-7) ... Selecting previously unselected package libgc1:amd64. Preparing to unpack .../05-libgc1_1%3a8.0.4-2.1_amd64.deb ... Unpacking libgc1:amd64 (1:8.0.4-2.1) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../06-libobjc4_10.2.0-15_amd64.deb ... Unpacking libobjc4:amd64 (10.2.0-15) ... Selecting previously unselected package libobjc-10-dev:amd64. Preparing to unpack .../07-libobjc-10-dev_10.2.0-15_amd64.deb ... Unpacking libobjc-10-dev:amd64 (10.2.0-15) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../08-libc6-i386_2.31-4_amd64.deb ... Unpacking libc6-i386 (2.31-4) ... Selecting previously unselected package lib32gcc-s1. Preparing to unpack .../09-lib32gcc-s1_10.2.0-15_amd64.deb ... Unpacking lib32gcc-s1 (10.2.0-15) ... Selecting previously unselected package lib32stdc++6. Preparing to unpack .../10-lib32stdc++6_10.2.0-15_amd64.deb ... Unpacking lib32stdc++6 (10.2.0-15) ... Selecting previously unselected package libclang-common-10-dev. Preparing to unpack .../11-libclang-common-10-dev_1%3a10.0.1-7_amd64.deb ... Unpacking libclang-common-10-dev (1:10.0.1-7) ... Selecting previously unselected package libclang1-10. Preparing to unpack .../12-libclang1-10_1%3a10.0.1-7_amd64.deb ... Unpacking libclang1-10 (1:10.0.1-7) ... Selecting previously unselected package clang-10. Preparing to unpack .../13-clang-10_1%3a10.0.1-7_amd64.deb ... Unpacking clang-10 (1:10.0.1-7) ... Selecting previously unselected package libasan5:amd64. Preparing to unpack .../14-libasan5_9.3.0-18_amd64.deb ... Unpacking libasan5:amd64 (9.3.0-18) ... Selecting previously unselected package libgcc-9-dev:amd64. Preparing to unpack .../15-libgcc-9-dev_9.3.0-18_amd64.deb ... Unpacking libgcc-9-dev:amd64 (9.3.0-18) ... Selecting previously unselected package libobjc-9-dev:amd64. Preparing to unpack .../16-libobjc-9-dev_9.3.0-18_amd64.deb ... Unpacking libobjc-9-dev:amd64 (9.3.0-18) ... Selecting previously unselected package libomp5-10:amd64. Preparing to unpack .../17-libomp5-10_1%3a10.0.1-7_amd64.deb ... Unpacking libomp5-10:amd64 (1:10.0.1-7) ... Selecting previously unselected package libomp-10-dev. Preparing to unpack .../18-libomp-10-dev_1%3a10.0.1-7_amd64.deb ... Unpacking libomp-10-dev (1:10.0.1-7) ... Setting up libasan5:amd64 (9.3.0-18) ... Setting up libz3-4:amd64 (4.8.9-1) ... Setting up libgc1:amd64 (1:8.0.4-2.1) ... Setting up libomp5-10:amd64 (1:10.0.1-7) ... Setting up libc6-i386 (2.31-4) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libomp-10-dev (1:10.0.1-7) ... Setting up libedit2:amd64 (3.1-20191231-1) ... Setting up libobjc4:amd64 (10.2.0-15) ... Setting up libllvm10:amd64 (1:10.0.1-7) ... Setting up libgcc-9-dev:amd64 (9.3.0-18) ... Setting up lib32gcc-s1 (10.2.0-15) ... Setting up lib32stdc++6 (10.2.0-15) ... Setting up libclang1-10 (1:10.0.1-7) ... Setting up libobjc-9-dev:amd64 (9.3.0-18) ... Setting up libobjc-10-dev:amd64 (10.2.0-15) ... Setting up libclang-common-10-dev (1:10.0.1-7) ... Setting up libclang-cpp10 (1:10.0.1-7) ... Setting up clang-10 (1:10.0.1-7) ... Processing triggers for libc-bin (2.31-4) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8 9 10' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-10 g++-4.6 + ln -s clang-10 gcc-4.6 + ln -s clang-10 cpp-4.6 + ln -s clang-10 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-10 g++-4.7 + ln -s clang-10 gcc-4.7 + ln -s clang-10 cpp-4.7 + ln -s clang-10 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-10 g++-4.8 + ln -s clang-10 gcc-4.8 + ln -s clang-10 cpp-4.8 + ln -s clang-10 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-10 g++-4.9 + ln -s clang-10 gcc-4.9 + ln -s clang-10 cpp-4.9 + ln -s clang-10 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-10 g++-5 + ln -s clang-10 gcc-5 + ln -s clang-10 cpp-5 + ln -s clang-10 gcc + echo 'gcc-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-10 g++-6 + ln -s clang-10 gcc-6 + ln -s clang-10 cpp-6 + ln -s clang-10 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-10 g++-7 + ln -s clang-10 gcc-7 + ln -s clang-10 cpp-7 + ln -s clang-10 gcc + echo 'gcc-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-10 g++-8 + ln -s clang-10 gcc-8 + ln -s clang-10 cpp-8 + ln -s clang-10 gcc + echo 'gcc-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-9 gcc-9 cpp-9 gcc + ln -s clang++-10 g++-9 + ln -s clang-10 gcc-9 + ln -s clang-10 cpp-9 + ln -s clang-10 gcc + echo 'gcc-9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-10 gcc-10 cpp-10 gcc + ln -s clang++-10 g++-10 + ln -s clang-10 gcc-10 + ln -s clang-10 cpp-10 + ln -s clang-10 gcc + echo 'gcc-10 hold' + dpkg --set-selections + echo 'g++-10 hold' + dpkg --set-selections + cd - /build/snap-aligner-pxfa27 + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang + cd /usr/bin/ + rm -f clang++ clang + ln -s clang-10 clang++ + ln -s clang-10 clang + clang++ --version Debian clang version 10.0.1-7 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + clang --version Debian clang version 10.0.1-7 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + cd - /build/snap-aligner-pxfa27 + apt install --yes --no-install-recommends --force-yes qt5-qmake WARNING: apt does not have a stable CLI interface. Use with caution in scripts. Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: qt5-qmake-bin qtchooser The following NEW packages will be installed: qt5-qmake qt5-qmake-bin qtchooser 0 upgraded, 3 newly installed, 0 to remove and 1 not upgraded. Need to get 1304 kB of archives. After this operation, 4865 kB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake-bin amd64 5.14.2+dfsg-6 [1035 kB] Get:2 http://127.0.0.1:12990/debian sid/main amd64 qtchooser amd64 66-2 [26.3 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake amd64 5.14.2+dfsg-6 [242 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1304 kB in 0s (21.1 MB/s) Selecting previously unselected package qt5-qmake-bin. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13315 files and directories currently installed.) Preparing to unpack .../qt5-qmake-bin_5.14.2+dfsg-6_amd64.deb ... Unpacking qt5-qmake-bin (5.14.2+dfsg-6) ... Selecting previously unselected package qtchooser. Preparing to unpack .../qtchooser_66-2_amd64.deb ... Unpacking qtchooser (66-2) ... Selecting previously unselected package qt5-qmake:amd64. Preparing to unpack .../qt5-qmake_5.14.2+dfsg-6_amd64.deb ... Unpacking qt5-qmake:amd64 (5.14.2+dfsg-6) ... Setting up qt5-qmake-bin (5.14.2+dfsg-6) ... Setting up qtchooser (66-2) ... Setting up qt5-qmake:amd64 (5.14.2+dfsg-6) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + cp /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qmake.conf /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qplatformdefs.h /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ + ls -al /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ total 16 drwxr-xr-x 2 root root 4096 Oct 29 19:53 . drwxr-xr-x 76 root root 4096 Oct 29 19:53 .. -rw-r--r-- 1 root root 276 Oct 29 19:53 qmake.conf -rw-r--r-- 1 root root 3218 Oct 29 19:53 qplatformdefs.h + cat /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/qmake.conf # # qmake configuration for linux-clang # MAKEFILE_GENERATOR = UNIX CONFIG += incremental QMAKE_INCREMENTAL_STYLE = sublib include(../common/linux.conf) include(../common/gcc-base-unix.conf) include(../common/clang.conf) QMAKE_LFLAGS += -ccc-gcc-name g++ load(qt_config) + export QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + sed -i -e 's|compare_problem(2,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + sed -i -e 's|compare_problem(1,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + grep 'compare_problem(' /usr/bin/dpkg-gensymbols compare_problem(4, g_('new libraries appeared in the symbols file: %s'), "@libs"); compare_problem(3, g_('some libraries disappeared in the symbols file: %s'), "@libs"); compare_problem(0, g_('some new symbols appeared in the symbols file: %s'), compare_problem(0, g_('some symbols or patterns disappeared in the symbols file: %s'), I: Finished running '/tmp/clang11'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/snap-aligner-pxfa27/resolver-4cEn2H' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:12990/debian sid InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libdebconfclient0 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 49.6 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 libdebconfclient0 amd64 0.255 [49.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 49.6 kB in 0s (3587 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14056 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.255_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.255) over (0.254) ... Setting up libdebconfclient0:amd64 (0.255) ... Processing triggers for libc-bin (2.31-4) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'snap-aligner' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/snap-aligner.git Please use: git clone https://salsa.debian.org/med-team/snap-aligner.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1987 kB of source archives. Get:1 http://127.0.0.1:12990/debian sid/main snap-aligner 1.0~beta.18+dfsg-4 (dsc) [2243 B] Get:2 http://127.0.0.1:12990/debian sid/main snap-aligner 1.0~beta.18+dfsg-4 (tar) [1976 kB] Get:3 http://127.0.0.1:12990/debian sid/main snap-aligner 1.0~beta.18+dfsg-4 (diff) [9572 B] Fetched 1987 kB in 0s (18.6 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/snap-aligner-pxfa27/snap-aligner-1.0~beta.18+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/snap-aligner-pxfa27' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [386 B] Get:5 copy:/<>/apt_archive ./ Packages [465 B] Fetched 1808 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf sensible-utils zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy sensible-utils zlib1g-dev 0 upgraded, 37 newly installed, 0 to remove and 0 not upgraded. Need to get 19.9 MB of archives. After this operation, 73.0 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [896 B] Get:2 http://127.0.0.1:12990/debian sid/main amd64 bsdextrautils amd64 2.36-3+b1 [140 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 autoconf all 2.69-11.1 [341 kB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 automake all 1:1.16.2-4 [801 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libtool all 2.4.6-14 [513 kB] Get:20 http://127.0.0.1:12990/debian sid/main amd64 dh-autoreconf all 19 [16.9 kB] Get:21 http://127.0.0.1:12990/debian sid/main amd64 libdebhelper-perl all 13.2.1 [188 kB] Get:22 http://127.0.0.1:12990/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:23 http://127.0.0.1:12990/debian sid/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:24 http://127.0.0.1:12990/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:25 http://127.0.0.1:12990/debian sid/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:26 http://127.0.0.1:12990/debian sid/main amd64 libelf1 amd64 0.181-1 [164 kB] Get:27 http://127.0.0.1:12990/debian sid/main amd64 dwz amd64 0.13-5 [151 kB] Get:28 http://127.0.0.1:12990/debian sid/main amd64 libglib2.0-0 amd64 2.66.1-2 [1362 kB] Get:29 http://127.0.0.1:12990/debian sid/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:30 http://127.0.0.1:12990/debian sid/main amd64 libxml2 amd64 2.9.10+dfsg-6.1 [692 kB] Get:31 http://127.0.0.1:12990/debian sid/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:32 http://127.0.0.1:12990/debian sid/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:33 http://127.0.0.1:12990/debian sid/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:34 http://127.0.0.1:12990/debian sid/main amd64 po-debconf all 1.0.21 [248 kB] Get:35 http://127.0.0.1:12990/debian sid/main amd64 debhelper all 13.2.1 [1007 kB] Get:36 http://127.0.0.1:12990/debian sid/main amd64 help2man amd64 1.47.16 [181 kB] Get:37 http://127.0.0.1:12990/debian sid/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2 [190 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 19.9 MB in 0s (139 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 14056 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36-3+b1_amd64.deb ... Unpacking bsdextrautils (2.36-3+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../05-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.38-5_amd64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../08-libmagic1_1%3a5.38-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../09-file_1%3a5.38-5_amd64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../10-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../11-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. 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Unpacking gettext (0.19.8.1-10) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../31-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../32-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../33-debhelper_13.2.1_all.deb ... Unpacking debhelper (13.2.1) ... Selecting previously unselected package help2man. Preparing to unpack .../34-help2man_1.47.16_amd64.deb ... Unpacking help2man (1.47.16) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../35-zlib1g-dev_1%3a1.2.11.dfsg-2_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.2.11.dfsg-2) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../36-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up bsdextrautils (2.36-3+b1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.66.1-2) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.2.1) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-5) ... Setting up autotools-dev (20180224.1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:amd64 (0.181-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.1) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up help2man (1.47.16) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up automake (1:1.16.2-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up debhelper (13.2.1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in amd64 arm64 mips64el ppc64el alpha kfreebsd-amd64 ppc64 sparc64) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-cloud-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.35.1-2 dpkg-dev_1.20.5 g++-10_10.2.0-15 gcc-10_10.2.0-15 libc6-dev_2.31-4 libstdc++-10-dev_10.2.0-15 libstdc++6_10.2.0-15 linux-libc-dev_5.9.1-1 Package versions: adduser_3.118 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.48 bash_5.1~rc1-2 binutils_2.35.1-2 binutils-common_2.35.1-2 binutils-x86-64-linux-gnu_2.35.1-2 bsdextrautils_2.36-3+b1 bsdutils_1:2.36-3+b1 build-essential_12.8 bzip2_1.0.8-4 clang-10_1:10.0.1-7 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.0-15 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1 debian-archive-keyring_2019.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 file_1:5.38-5 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1 g++-10_10.2.0-15 gcc_4:10.2.0-1 gcc-10_10.2.0-15 gcc-10-base_10.2.0-15 gcc-9-base_9.3.0-18 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 help2man_1.47.16 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 lib32gcc-s1_10.2.0-15 lib32stdc++6_10.2.0-15 libacl1_2.2.53-8 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libasan5_9.3.0-18 libasan6_10.2.0-15 libatomic1_10.2.0-15 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-2 libblkid1_2.36-3+b1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4 libc-bin_2.31-4 libc-dev-bin_2.31-4 libc6_2.31-4 libc6-dev_2.31-4 libc6-i386_2.31-4 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-15 libclang-common-10-dev_1:10.0.1-7 libclang-cpp10_1:10.0.1-7 libclang1-10_1:10.0.1-7 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-2 libctf0_2.35.1-2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdpkg-perl_1.20.5 libedit2_3.1-20191231-1 libelf1_0.181-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.9.0-1 libgc1_1:8.0.4-2.1 libgcc-10-dev_10.2.0-15 libgcc-9-dev_9.3.0-18 libgcc-s1_10.2.0-15 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.1-2 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-15 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libitm1_10.2.0-15 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 libllvm10_1:10.0.1-7 liblocale-gettext-perl_1.07-4 liblsan0_10.2.0-15 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3+b1 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libnettle8_3.6-2 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libobjc-10-dev_10.2.0-15 libobjc-9-dev_9.3.0-18 libobjc4_10.2.0-15 libomp-10-dev_1:10.0.1-7 libomp5-10_1:10.0.1-7 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libquadmath0_10.2.0-15 libseccomp2_2.4.4-1+b1 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36-3+b1 libss2_1.45.6-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-15 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+------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: snap-aligner Binary: snap-aligner Architecture: amd64 arm64 mips64el ppc64el alpha kfreebsd-amd64 ppc64 sparc64 Version: 1.0~beta.18+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Pranav Ballaney Homepage: http://snap.cs.berkeley.edu/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/snap-aligner Vcs-Git: https://salsa.debian.org/med-team/snap-aligner.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev Package-List: snap-aligner deb science optional arch=amd64,arm64,mips64el,ppc64el,alpha,kfreebsd-amd64,ppc64,sparc64 Checksums-Sha1: 619b4c4cc646a385e36c2b03fdf504bbca4c3c16 1975632 snap-aligner_1.0~beta.18+dfsg.orig.tar.xz 79c319d7f8cedd3c6ccdf33a3ec3d14032bef1ea 9572 snap-aligner_1.0~beta.18+dfsg-4.debian.tar.xz Checksums-Sha256: a5ed636903d9c37cf51f09973003b39d571882ba399d437c263fd7f755f55fdb 1975632 snap-aligner_1.0~beta.18+dfsg.orig.tar.xz 4e69e0888f2a8295a47eca0d7bff6ad1b929e7be0870ef6336fb224ba2891463 9572 snap-aligner_1.0~beta.18+dfsg-4.debian.tar.xz Files: a435cf84e55809d806f569778bf1ed45 1975632 snap-aligner_1.0~beta.18+dfsg.orig.tar.xz a9b34451ab50a270b042cd924a2d002f 9572 snap-aligner_1.0~beta.18+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl8G398ACgkQPCZ2P2xn 5uJsUQ/+O5AXsrgRN8rRgCyt/Rt3x+r6Cop0GCNCPtC28/OwOyasIjph2hRNY5mD xcQD+zKP3yEH36I2NA2MT7YnigAevAO00bEnwUSnf1yefqr+WaZ3jvu0gAvoSEoi yKfo8k5mlFXRtlYExlAxa4WFK9eFYRx5sBLl8/ZwqTPYgCg67+xhbpzE4+Soaofa NhC+xSy1mh9lGfSfEQirCfU9GMUMWU3n5rwLxW5JvqKs5L8QEQVU3QWtgBq7pl0Q Cys0ruYzc6wo2vT7RjCHmxk3qQPTFdUqzk/meD0x3zi+cPyMf8FzOYjh/vjet2mr 1Z44uiRoNV6dd3SiHy+IHTzBj2oRr+8Mu08tMylEHmTIvDqaHNXS67q5jsOD6hEF JgbROClbgvYZJ7eJ/H+eMSmEVnPBFZcCRh++rGzoiPZsP+QhT3mYpxOFur/HTvtI NypUwDisbsgF7SWuCXgj1cPIZhysS4zmyAjMzUSn7oBckP7SLSs5OyQxCHzvVPKW qQe7ibiL8h1o6p1TNAKXz6oL2e3kFUBwgIWNEa5R+tRvO0dcjLJgunA7KzTb5ldz O0u0+vDVA3adPU5t6pEIO+LLYwlQ3etdYhAnQcwIyl7kuQLBcGjTMNl3sA3ZzYPH gzPtOV84yTr/7+4GRlE+XlSqU7cyopVvAQLf4dN1/DyaLcJXU2c= =aWnf -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.4ySnQwCy/trustedkeys.kbx': General error gpgv: Signature made Thu Jul 9 09:14:07 2020 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./snap-aligner_1.0~beta.18+dfsg-4.dsc dpkg-source: info: extracting snap-aligner in /<> dpkg-source: info: unpacking snap-aligner_1.0~beta.18+dfsg.orig.tar.xz dpkg-source: info: unpacking snap-aligner_1.0~beta.18+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying non-x86-and-kfreebsd dpkg-source: info: applying drop-msse dpkg-source: info: applying spelling dpkg-source: info: applying finish-rename dpkg-source: info: applying hardening.patch dpkg-source: info: applying add_missing_return.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=sid-amd64-sbuild-db9687d5-1cd1-4de2-aa7f-69b2665bf475 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -b -rfakeroot dpkg-buildpackage: info: source package snap-aligner dpkg-buildpackage: info: source version 1.0~beta.18+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j4 clean make[2]: Entering directory '/<>' rm -f SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BiasTables.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/snap/Main.o apps/snap/stdafx.o tests/EventTest.o tests/LandauVishkinTest.o tests/ProbabilityDistanceTest.o tests/TestLib.o tests/main.o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o snap-aligner unit_tests SNAPCommand snap SNAP make[2]: Leaving directory '/<>' rm -f debian/*.1 rm -f */*.d */*/*.d make[1]: Leaving directory '/<>' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j4 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>' g++ -std=gnu++98 -MMD -ISNAPLib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerContext.o SNAPLib/AlignerContext.cpp g++ -std=gnu++98 -MMD -ISNAPLib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerOptions.o SNAPLib/AlignerOptions.cpp g++ -std=gnu++98 -MMD -ISNAPLib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerStats.o SNAPLib/AlignerStats.cpp g++ -std=gnu++98 -MMD -ISNAPLib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignmentResult.o SNAPLib/AlignmentResult.cpp In file included from SNAPLib/AlignmentResult.cpp:24: SNAPLib/GenomeIndex.h:193:12: warning: class member cannot be redeclared [-Wredeclared-class-member] struct OverflowBackpointer; ^ SNAPLib/GenomeIndex.h:119:12: note: previous declaration is here struct OverflowBackpointer { ^ In file included from SNAPLib/AlignerOptions.cpp:27: In file included from SNAPLib/AlignerOptions.h:30: SNAPLib/Read.h:315:31: warning: comparison of array 'other.localBuffer' equal to a null pointer is always false [-Wtautological-pointer-compare] if (NULL == other.localBuffer || other.data < other.localBuffer || other.data >= other.localBuffer + other.localBufferAllocationOffset - dataLength) { ~~~~ ~~~~~~^~~~~~~~~~~ In file included from SNAPLib/AlignerContext.cpp:29: In file included from SNAPLib/AlignerOptions.h:30: SNAPLib/Read.h:315:31: warning: comparison of array 'other.localBuffer' equal to a null pointer is always false [-Wtautological-pointer-compare] if (NULL == other.localBuffer || other.data < other.localBuffer || other.data >= other.localBuffer + other.localBufferAllocationOffset - dataLength) { ~~~~ ~~~~~~^~~~~~~~~~~ g++ -std=gnu++98 -MMD -ISNAPLib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ApproximateCounter.o SNAPLib/ApproximateCounter.cpp In file included from SNAPLib/AlignerContext.cpp:30: In file included from SNAPLib/AlignerContext.h:32: SNAPLib/GenomeIndex.h:193:12: warning: class member cannot be redeclared [-Wredeclared-class-member] struct OverflowBackpointer; ^ SNAPLib/GenomeIndex.h:119:12: note: previous declaration is here struct OverflowBackpointer { ^ 1 warning generated. g++ -std=gnu++98 -MMD -ISNAPLib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Bam.o SNAPLib/Bam.cpp In file included from SNAPLib/AlignerOptions.cpp:33: In file included from SNAPLib/BaseAligner.h:36: SNAPLib/GenomeIndex.h:193:12: warning: class member cannot be redeclared [-Wredeclared-class-member] struct OverflowBackpointer; ^ SNAPLib/GenomeIndex.h:119:12: note: previous declaration is here struct OverflowBackpointer { ^ SNAPLib/AlignerContext.cpp:275:9: warning: delete called on 'ReadWriterSupplier' that is abstract but has non-virtual destructor [-Wdelete-abstract-non-virtual-dtor] delete writerSupplier; ^ SNAPLib/AlignerContext.cpp:341:34: error: expected ')' FormatUIntWithCommas((unsigned _int64)(1000 * stats->totalReads / max(alignTime, (_int64)1)), readsPerSecond, strBufLen), // Aligntime is in ms ^ SNAPLib/AlignerContext.cpp:341:24: note: to match this '(' FormatUIntWithCommas((unsigned _int64)(1000 * stats->totalReads / max(alignTime, (_int64)1)), readsPerSecond, strBufLen), // Aligntime is in ms ^ SNAPLib/AlignerContext.cpp:352:17: warning: format specifies type 'double' but the argument has type '_int64' (aka 'long') [-Wformat] stats->lvCalls, ^~~~~~~~~~~~~~ SNAPLib/AlignerContext.cpp:353:5: warning: format specifies type 'long long' but the argument has type 'double' [-Wformat] 100.0 * stats->alignedAsPairs / stats->totalReads, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SNAPLib/AlignerContext.cpp:354:17: warning: format specifies type 'long long' but the argument has type '_int64' (aka 'long') [-Wformat] stats->totalReads, ^~~~~~~~~~~~~~~~~ 6 warnings and 1 error generated. make[2]: *** [: SNAPLib/AlignerContext.o] Error 1 make[2]: *** Waiting for unfinished jobs.... 2 warnings generated. In file included from SNAPLib/Bam.cpp:20: In file included from SNAPLib/SAM.h:24: In file included from SNAPLib/PairedEndAligner.h:28: SNAPLib/Read.h:315:31: warning: comparison of array 'other.localBuffer' equal to a null pointer is always false [-Wtautological-pointer-compare] if (NULL == other.localBuffer || other.data < other.localBuffer || other.data >= other.localBuffer + other.localBufferAllocationOffset - dataLength) { ~~~~ ~~~~~~^~~~~~~~~~~ In file included from SNAPLib/Bam.cpp:34: In file included from SNAPLib/PairedAligner.h:27: In file included from SNAPLib/AlignerContext.h:32: SNAPLib/GenomeIndex.h:193:12: warning: class member cannot be redeclared [-Wredeclared-class-member] struct OverflowBackpointer; ^ SNAPLib/GenomeIndex.h:119:12: note: previous declaration is here struct OverflowBackpointer { ^ 2 warnings generated. make[2]: Leaving directory '/<>' dh_auto_build: error: make -j4 "INSTALL=install --strip-program=true" returned exit code 2 make[1]: *** [debian/rules:21: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:12: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2020-10-29T19:53:25Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: 10200 Build-Time: 4 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 5 Job: snap-aligner_1.0~beta.18+dfsg-4 Machine Architecture: amd64 Package: snap-aligner Package-Time: 27 Source-Version: 1.0~beta.18+dfsg-4 Space: 10200 Status: attempted Version: 1.0~beta.18+dfsg-4 -------------------------------------------------------------------------------- Finished at 2020-10-29T19:53:25Z Build needed 00:00:27, 10200k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 27.644080791s DC-Time-Estimation: 27.644080791 versus expected 92 (r/m: 2.32801805549462 ; m: 27.644080791)