DC-Build-Header: libghemical 3.0.0-4.3 / 2021-10-26 22:25:21 +0000 DC-Task: type:rebuild-binarch-only source:libghemical version:3.0.0-4.3 chroot:unstable esttime:139 logfile:/tmp/libghemical_3.0.0-4.3_unstable_clang12.log modes:clang12:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --no-run-lintian --chroot-setup-commands=/tmp/clang12 libghemical_3.0.0-4.3' sbuild (Debian sbuild) 0.78.1 (09 February 2019) on ip-172-31-4-209.eu-central-1.compute.internal +==============================================================================+ | libghemical 3.0.0-4.3 (amd64) Tue, 26 Oct 2021 22:25:21 +0000 | +==============================================================================+ Package: libghemical Version: 3.0.0-4.3 Source Version: 3.0.0-4.3 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-b15cc5d5-440e-4440-a7b2-e84acc5d7046' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang12 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=12 + echo 'Install of clang-12' Install of clang-12 + apt-get update Get:1 http://127.0.0.1:12990/debian sid InRelease [165 kB] Get:2 http://127.0.0.1:12990/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://127.0.0.1:12990/debian sid/main Sources T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [47.3 kB] Get:4 http://127.0.0.1:12990/debian sid/main Sources T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [47.3 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 Packages T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [55.9 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 Packages T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [55.9 kB] Get:6 http://127.0.0.1:12990/debian sid/main Translation-en [6586 kB] Fetched 6981 kB in 3s (2745 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-12 libomp-12-dev libobjc-9-dev Reading package lists... Building dependency tree... The following additional packages will be installed: lib32gcc-s1 lib32stdc++6 libasan5 libbsd0 libc6-i386 libclang-common-12-dev libclang-cpp12 libclang1-12 libedit2 libelf1 libgc1 libgcc-9-dev libicu67 libllvm12 libmd0 libobjc-11-dev libobjc4 libomp5-12 libunwind-12 libxml2 libz3-4 llvm-12-linker-tools Suggested packages: clang-12-doc libomp-12-doc Recommended packages: llvm-12-dev python3 The following NEW packages will be installed: clang-12 lib32gcc-s1 lib32stdc++6 libasan5 libbsd0 libc6-i386 libclang-common-12-dev libclang-cpp12 libclang1-12 libedit2 libelf1 libgc1 libgcc-9-dev libicu67 libllvm12 libmd0 libobjc-11-dev libobjc-9-dev libobjc4 libomp-12-dev libomp5-12 libunwind-12 libxml2 libz3-4 llvm-12-linker-tools 0 upgraded, 25 newly installed, 0 to remove and 0 not upgraded. Need to get 67.6 MB of archives. After this operation, 349 MB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 libmd0 amd64 1.0.4-1 [29.6 kB] Get:2 http://127.0.0.1:12990/debian sid/main amd64 libbsd0 amd64 0.11.3-1 [108 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libedit2 amd64 3.1-20210910-1 [97.5 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libxml2 amd64 2.9.12+dfsg-5 [696 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 libz3-4 amd64 4.8.12-1+b1 [6997 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 libllvm12 amd64 1:12.0.1-15 [19.4 MB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 libclang-cpp12 amd64 1:12.0.1-15 [9996 kB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 libgc1 amd64 1:8.0.4-3 [239 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 libobjc4 amd64 11.2.0-10 [43.2 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 libobjc-11-dev amd64 11.2.0-10 [170 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 libc6-i386 amd64 2.32-4 [2624 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 lib32gcc-s1 amd64 11.2.0-10 [49.9 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 lib32stdc++6 amd64 11.2.0-10 [601 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 libclang-common-12-dev amd64 1:12.0.1-15 [4819 kB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 llvm-12-linker-tools amd64 1:12.0.1-15 [1222 kB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 libclang1-12 amd64 1:12.0.1-15 [5644 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 clang-12 amd64 1:12.0.1-15 [117 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libasan5 amd64 9.4.0-3 [2734 kB] Get:20 http://127.0.0.1:12990/debian sid/main amd64 libelf1 amd64 0.185-2 [172 kB] Get:21 http://127.0.0.1:12990/debian sid/main amd64 libgcc-9-dev amd64 9.4.0-3 [2343 kB] Get:22 http://127.0.0.1:12990/debian sid/main amd64 libobjc-9-dev amd64 9.4.0-3 [219 kB] Get:23 http://127.0.0.1:12990/debian sid/main amd64 libunwind-12 amd64 1:12.0.1-15 [63.9 kB] Get:24 http://127.0.0.1:12990/debian sid/main amd64 libomp5-12 amd64 1:12.0.1-15 [405 kB] Get:25 http://127.0.0.1:12990/debian sid/main amd64 libomp-12-dev amd64 1:12.0.1-15 [104 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 67.6 MB in 0s (152 MB/s) Selecting previously unselected package libmd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12431 files and directories currently installed.) Preparing to unpack .../00-libmd0_1.0.4-1_amd64.deb ... Unpacking libmd0:amd64 (1.0.4-1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../01-libbsd0_0.11.3-1_amd64.deb ... Unpacking libbsd0:amd64 (0.11.3-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../02-libedit2_3.1-20210910-1_amd64.deb ... 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Setting up libc6-i386 (2.32-4) ... Setting up libbsd0:amd64 (0.11.3-1) ... Setting up libelf1:amd64 (0.185-2) ... Setting up libxml2:amd64 (2.9.12+dfsg-5) ... Setting up libedit2:amd64 (3.1-20210910-1) ... Setting up libobjc4:amd64 (11.2.0-10) ... Setting up libgcc-9-dev:amd64 (9.4.0-3) ... Setting up lib32gcc-s1 (11.2.0-10) ... Setting up lib32stdc++6 (11.2.0-10) ... Setting up libllvm12:amd64 (1:12.0.1-15) ... Setting up libobjc-9-dev:amd64 (9.4.0-3) ... Setting up libclang-common-12-dev (1:12.0.1-15) ... Setting up libomp5-12:amd64 (1:12.0.1-15) ... Setting up libobjc-11-dev:amd64 (11.2.0-10) ... Setting up llvm-12-linker-tools (1:12.0.1-15) ... Setting up libclang1-12 (1:12.0.1-15) ... Setting up libclang-cpp12 (1:12.0.1-15) ... Setting up libomp-12-dev (1:12.0.1-15) ... Setting up clang-12 (1:12.0.1-15) ... Processing triggers for libc-bin (2.32-4) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8 9 10 11' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-12 g++-4.6 + ln -s clang-12 gcc-4.6 + ln -s clang-12 cpp-4.6 + ln -s clang-12 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-12 g++-4.7 + ln -s clang-12 gcc-4.7 + ln -s clang-12 cpp-4.7 + ln -s clang-12 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-12 g++-4.8 + ln -s clang-12 gcc-4.8 + ln -s clang-12 cpp-4.8 + ln -s clang-12 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-12 g++-4.9 + ln -s clang-12 gcc-4.9 + ln -s clang-12 cpp-4.9 + ln -s clang-12 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-12 g++-5 + ln -s clang-12 gcc-5 + ln -s clang-12 cpp-5 + ln -s clang-12 gcc + echo 'gcc-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-12 g++-6 + ln -s clang-12 gcc-6 + ln -s clang-12 cpp-6 + ln -s clang-12 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-12 g++-7 + ln -s clang-12 gcc-7 + ln -s clang-12 cpp-7 + ln -s clang-12 gcc + echo 'gcc-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-12 g++-8 + ln -s clang-12 gcc-8 + ln -s clang-12 cpp-8 + ln -s clang-12 gcc + echo 'gcc-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-9 gcc-9 cpp-9 gcc + ln -s clang++-12 g++-9 + ln -s clang-12 gcc-9 + ln -s clang-12 cpp-9 + ln -s clang-12 gcc + echo 'gcc-9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-10 gcc-10 cpp-10 gcc + ln -s clang++-12 g++-10 + ln -s clang-12 gcc-10 + ln -s clang-12 cpp-10 + ln -s clang-12 gcc + echo 'gcc-10 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-10 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-10 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-10 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-11 gcc-11 cpp-11 gcc + ln -s clang++-12 g++-11 + ln -s clang-12 gcc-11 + ln -s clang-12 cpp-11 + ln -s clang-12 gcc + echo 'gcc-11 hold' + dpkg --set-selections + echo 'g++-11 hold' + dpkg --set-selections + cd - /build/libghemical-zyrEb5 + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang + cd /usr/bin/ + rm -f clang++ clang + ln -s clang-12 clang++ + ln -s clang-12 clang + clang++ --version Debian clang version 12.0.1-15 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + clang --version Debian clang version 12.0.1-15 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + cd - /build/libghemical-zyrEb5 + apt install --yes --no-install-recommends --force-yes qt5-qmake WARNING: apt does not have a stable CLI interface. Use with caution in scripts. Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: qt5-qmake-bin qtchooser The following NEW packages will be installed: qt5-qmake qt5-qmake-bin qtchooser 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 1322 kB of archives. After this operation, 4914 kB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake-bin amd64 5.15.2+dfsg-12 [1046 kB] Get:2 http://127.0.0.1:12990/debian sid/main amd64 qtchooser amd64 66-2 [26.3 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake amd64 5.15.2+dfsg-12 [249 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1322 kB in 0s (56.9 MB/s) Selecting previously unselected package qt5-qmake-bin. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13527 files and directories currently installed.) Preparing to unpack .../qt5-qmake-bin_5.15.2+dfsg-12_amd64.deb ... Unpacking qt5-qmake-bin (5.15.2+dfsg-12) ... Selecting previously unselected package qtchooser. Preparing to unpack .../qtchooser_66-2_amd64.deb ... Unpacking qtchooser (66-2) ... Selecting previously unselected package qt5-qmake:amd64. Preparing to unpack .../qt5-qmake_5.15.2+dfsg-12_amd64.deb ... Unpacking qt5-qmake:amd64 (5.15.2+dfsg-12) ... Setting up qt5-qmake-bin (5.15.2+dfsg-12) ... Setting up qtchooser (66-2) ... Setting up qt5-qmake:amd64 (5.15.2+dfsg-12) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + cp /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qmake.conf /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qplatformdefs.h /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ + ls -al /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ total 16 drwxr-xr-x 2 root root 4096 Oct 26 22:25 . drwxr-xr-x 76 root root 4096 Oct 26 22:25 .. -rw-r--r-- 1 root root 276 Oct 26 22:25 qmake.conf -rw-r--r-- 1 root root 3218 Oct 26 22:25 qplatformdefs.h + cat /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/qmake.conf # # qmake configuration for linux-clang # MAKEFILE_GENERATOR = UNIX CONFIG += incremental QMAKE_INCREMENTAL_STYLE = sublib include(../common/linux.conf) include(../common/gcc-base-unix.conf) include(../common/clang.conf) QMAKE_LFLAGS += -ccc-gcc-name g++ load(qt_config) + export QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + sed -i -e 's|compare_problem(2,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + sed -i -e 's|compare_problem(1,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + grep 'compare_problem(' /usr/bin/dpkg-gensymbols compare_problem(4, g_('new libraries appeared in the symbols file: %s'), "@libs"); compare_problem(3, g_('some libraries disappeared in the symbols file: %s'), "@libs"); compare_problem(0, g_('some new symbols appeared in the symbols file: %s'), compare_problem(0, g_('some symbols or patterns disappeared in the symbols file: %s'), I: Finished running '/tmp/clang12'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/libghemical-zyrEb5/resolver-8ik8pp' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:12990/debian sid InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libghemical' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org:/debichem-team/libghemical.git Please use: git clone https://salsa.debian.org:/debichem-team/libghemical.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 795 kB of source archives. Get:1 http://127.0.0.1:12990/debian sid/main libghemical 3.0.0-4.3 (dsc) [2290 B] Get:2 http://127.0.0.1:12990/debian sid/main libghemical 3.0.0-4.3 (tar) [788 kB] Get:3 http://127.0.0.1:12990/debian sid/main libghemical 3.0.0-4.3 (diff) [5248 B] Fetched 795 kB in 0s (9419 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libghemical-zyrEb5/libghemical-3.0.0' with '<>' I: NOTICE: Log filtering will replace 'build/libghemical-zyrEb5' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), gfortran | fortran-compiler, flex, intltool (>= 0.40.0), pkg-config (>= 0.9.0), libblas-dev, liblapack-dev, libmopac7-dev (>= 1.14), libsc-dev (>= 2.3.1-2), mesa-common-dev, libglib2.0-dev, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 12), gfortran, flex, intltool (>= 0.40.0), pkg-config (>= 0.9.0), libblas-dev, liblapack-dev, libmopac7-dev (>= 1.14), libsc-dev (>= 2.3.1-2), mesa-common-dev, libglib2.0-dev, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [463 B] Get:5 copy:/<>/apt_archive ./ Packages [540 B] Fetched 1960 B in 0s (194 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz file flex gettext gettext-base gfortran gfortran-11 groff-base ibverbs-providers intltool intltool-debian libarchive-zip-perl libblas-dev libblas3 libblkid-dev libcbor0.8 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libencode-locale-perl libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libexpat1 libfabric1 libffi-dev libfido2-1 libfile-listing-perl libfile-stripnondeterminism-perl libgfortran-11-dev libgfortran5 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libglvnd0 libglx-dev libglx-mesa0 libglx0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libint1 libio-html-perl libio-socket-ssl-perl libjs-jquery libjs-jquery-ui liblapack-dev liblapack3 libltdl-dev libltdl7 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libmopac7-1gf libmopac7-dev libmount-dev libmpdec3 libncursesw6 libnet-http-perl libnet-ssleay-perl libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpciaccess-dev libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpmix-dev libpmix2 libpsm-infinipath1 libpsm2-2 libpthread-stubs0-dev libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librdmacm1 libreadline8 libsc-data libsc-dev libsc7v5 libselinux1-dev libsensors-config libsensors5 libsepol1-dev libsigsegv2 libsqlite3-0 libsub-override-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 libucx0 liburi-perl libvulkan1 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxml-parser-perl libxnvctrl0 libxshmfence1 libxxf86vm1 m4 man-db media-types mesa-common-dev mpi-default-dev netbase ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssl perl-openssl-defaults pkg-config po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3.9 python3.9-minimal readline-common sensible-utils uuid-dev x11proto-dev xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make bison flex-doc gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-11-multilib gfortran-11-doc libcoarrays-dev groff liblapack-doc libgirepository1.0-dev libglib2.0-doc libgdk-pixbuf2.0-bin | libgdk-pixbuf2.0-dev libxml2-utils libdata-dump-perl libhwloc-contrib-plugins libjs-jquery-ui-docs libtool-doc libcrypt-ssleay-perl openmpi-doc pciutils libsc-doc lm-sensors gcj-jdk libauthen-ntlm-perl libx11-doc libxcb-doc m4-doc apparmor less www-browser opencl-icd keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl python3-doc python3-tk python3-venv python3.9-venv python3.9-doc binfmt-support readline-doc Recommended packages: libfl-dev curl | wget | lynx libarchive-cpio-perl shared-mime-info xdg-user-dirs libhtml-format-perl libclone-perl javascript-common libgpm2 libcoarrays-openmpi-dev mesa-vulkan-drivers | vulkan-icd libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl xauth libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz file flex gettext gettext-base gfortran gfortran-11 groff-base ibverbs-providers intltool intltool-debian libarchive-zip-perl libblas-dev libblas3 libblkid-dev libcbor0.8 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libencode-locale-perl libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libexpat1 libfabric1 libffi-dev libfido2-1 libfile-listing-perl libfile-stripnondeterminism-perl libgfortran-11-dev libgfortran5 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libglvnd0 libglx-dev libglx-mesa0 libglx0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libint1 libio-html-perl libio-socket-ssl-perl libjs-jquery libjs-jquery-ui liblapack-dev liblapack3 libltdl-dev libltdl7 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libmopac7-1gf libmopac7-dev libmount-dev libmpdec3 libncursesw6 libnet-http-perl libnet-ssleay-perl libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpciaccess-dev libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpmix-dev libpmix2 libpsm-infinipath1 libpsm2-2 libpthread-stubs0-dev libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librdmacm1 libreadline8 libsc-data libsc-dev libsc7v5 libselinux1-dev libsensors-config libsensors5 libsepol1-dev libsigsegv2 libsqlite3-0 libsub-override-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 libucx0 liburi-perl libvulkan1 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxml-parser-perl libxnvctrl0 libxshmfence1 libxxf86vm1 m4 man-db media-types mesa-common-dev mpi-default-dev netbase ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssl perl-openssl-defaults pkg-config po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3.9 python3.9-minimal readline-common sbuild-build-depends-main-dummy sensible-utils uuid-dev x11proto-dev xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 192 newly installed, 0 to remove and 0 not upgraded. Need to get 126 MB of archives. After this operation, 472 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [964 B] Get:2 http://127.0.0.1:12990/debian sid/main amd64 bsdextrautils amd64 2.37.2-4 [143 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 groff-base amd64 1.22.4-7 [935 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 flex amd64 2.6.4-8 [440 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 libpython3.9-minimal amd64 3.9.7-4 [804 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 libexpat1 amd64 2.4.1-3 [104 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 python3.9-minimal amd64 3.9.7-4 [1963 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 media-types all 4.0.0 [30.3 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 libncursesw6 amd64 6.2+20210905-1 [133 kB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 readline-common all 8.1-2 [73.8 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 libreadline8 amd64 8.1-2 [168 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libsqlite3-0 amd64 3.36.0-2 [815 kB] Get:20 http://127.0.0.1:12990/debian sid/main amd64 libpython3.9-stdlib amd64 3.9.7-4 [1688 kB] Get:21 http://127.0.0.1:12990/debian sid/main amd64 python3.9 amd64 3.9.7-4 [480 kB] Get:22 http://127.0.0.1:12990/debian sid/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get:23 http://127.0.0.1:12990/debian sid/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get:24 http://127.0.0.1:12990/debian sid/main amd64 netbase all 6.3 [19.9 kB] Get:25 http://127.0.0.1:12990/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:26 http://127.0.0.1:12990/debian sid/main amd64 openssl amd64 1.1.1l-1 [851 kB] Get:27 http://127.0.0.1:12990/debian sid/main amd64 ca-certificates all 20211016 [156 kB] Get:28 http://127.0.0.1:12990/debian sid/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:29 http://127.0.0.1:12990/debian sid/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:30 http://127.0.0.1:12990/debian sid/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:31 http://127.0.0.1:12990/debian sid/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:32 http://127.0.0.1:12990/debian sid/main amd64 libcbor0.8 amd64 0.8.0-1 [27.1 kB] Get:33 http://127.0.0.1:12990/debian sid/main amd64 libfido2-1 amd64 1.8.0-1+b1 [63.4 kB] Get:34 http://127.0.0.1:12990/debian sid/main amd64 openssh-client amd64 1:8.4p1-6 [929 kB] Get:35 http://127.0.0.1:12990/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:36 http://127.0.0.1:12990/debian sid/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:37 http://127.0.0.1:12990/debian sid/main amd64 automake all 1:1.16.5-1 [823 kB] Get:38 http://127.0.0.1:12990/debian sid/main amd64 autopoint all 0.21-4 [510 kB] Get:39 http://127.0.0.1:12990/debian sid/main amd64 libdebhelper-perl all 13.5.2 [192 kB] Get:40 http://127.0.0.1:12990/debian sid/main amd64 libtool all 2.4.6-15 [513 kB] Get:41 http://127.0.0.1:12990/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:42 http://127.0.0.1:12990/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:43 http://127.0.0.1:12990/debian sid/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:44 http://127.0.0.1:12990/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.12.0-2 [26.3 kB] Get:45 http://127.0.0.1:12990/debian sid/main amd64 dh-strip-nondeterminism all 1.12.0-2 [15.5 kB] Get:46 http://127.0.0.1:12990/debian sid/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:47 http://127.0.0.1:12990/debian sid/main amd64 gettext amd64 0.21-4 [1311 kB] Get:48 http://127.0.0.1:12990/debian sid/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:49 http://127.0.0.1:12990/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:50 http://127.0.0.1:12990/debian sid/main amd64 debhelper all 13.5.2 [1056 kB] Get:51 http://127.0.0.1:12990/debian sid/main amd64 libgfortran5 amd64 11.2.0-10 [710 kB] Get:52 http://127.0.0.1:12990/debian sid/main amd64 libgfortran-11-dev amd64 11.2.0-10 [749 kB] Get:53 http://127.0.0.1:12990/debian sid/main amd64 gfortran-11 amd64 11.2.0-10 [50.2 MB] Get:54 http://127.0.0.1:12990/debian sid/main amd64 gfortran amd64 4:11.2.0-2 [1428 B] Get:55 http://127.0.0.1:12990/debian sid/main amd64 libnl-3-200 amd64 3.4.0-1+b1 [63.6 kB] Get:56 http://127.0.0.1:12990/debian sid/main amd64 libnl-route-3-200 amd64 3.4.0-1+b1 [161 kB] Get:57 http://127.0.0.1:12990/debian sid/main amd64 libibverbs1 amd64 36.0-1 [60.3 kB] Get:58 http://127.0.0.1:12990/debian sid/main amd64 ibverbs-providers amd64 36.0-1 [275 kB] Get:59 http://127.0.0.1:12990/debian sid/main amd64 liburi-perl all 5.08-1 [90.6 kB] Get:60 http://127.0.0.1:12990/debian sid/main amd64 libencode-locale-perl all 1.05-1.1 [13.2 kB] Get:61 http://127.0.0.1:12990/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:62 http://127.0.0.1:12990/debian sid/main amd64 libhttp-date-perl all 6.05-1 [10.4 kB] Get:63 http://127.0.0.1:12990/debian sid/main amd64 libfile-listing-perl all 6.14-1 [12.4 kB] Get:64 http://127.0.0.1:12990/debian sid/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:65 http://127.0.0.1:12990/debian sid/main amd64 libhtml-parser-perl amd64 3.76-1 [105 kB] Get:66 http://127.0.0.1:12990/debian sid/main amd64 libhtml-tree-perl all 5.07-2 [213 kB] Get:67 http://127.0.0.1:12990/debian sid/main amd64 libio-html-perl all 1.004-2 [16.1 kB] Get:68 http://127.0.0.1:12990/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get:69 http://127.0.0.1:12990/debian sid/main amd64 libhttp-message-perl all 6.33-1 [80.1 kB] Get:70 http://127.0.0.1:12990/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:71 http://127.0.0.1:12990/debian sid/main amd64 libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get:72 http://127.0.0.1:12990/debian sid/main amd64 perl-openssl-defaults amd64 5 [7360 B] Get:73 http://127.0.0.1:12990/debian sid/main amd64 libnet-ssleay-perl amd64 1.88-3+b1 [321 kB] Get:74 http://127.0.0.1:12990/debian sid/main amd64 libio-socket-ssl-perl all 2.072-1 [221 kB] Get:75 http://127.0.0.1:12990/debian sid/main amd64 libnet-http-perl all 6.21-1 [25.3 kB] Get:76 http://127.0.0.1:12990/debian sid/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:77 http://127.0.0.1:12990/debian sid/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:78 http://127.0.0.1:12990/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:79 http://127.0.0.1:12990/debian sid/main amd64 libwww-perl all 6.57-1 [193 kB] Get:80 http://127.0.0.1:12990/debian sid/main amd64 libxml-parser-perl amd64 2.46-2 [206 kB] Get:81 http://127.0.0.1:12990/debian sid/main amd64 intltool all 0.51.0-6 [50.8 kB] Get:82 http://127.0.0.1:12990/debian sid/main amd64 libblas3 amd64 3.10.0-1 [156 kB] Get:83 http://127.0.0.1:12990/debian sid/main amd64 libblas-dev amd64 3.10.0-1 [164 kB] Get:84 http://127.0.0.1:12990/debian sid/main amd64 uuid-dev amd64 2.37.2-4 [95.8 kB] Get:85 http://127.0.0.1:12990/debian sid/main amd64 libblkid-dev amd64 2.37.2-4 [232 kB] Get:86 http://127.0.0.1:12990/debian sid/main amd64 libdrm-common all 2.4.107-8 [15.3 kB] Get:87 http://127.0.0.1:12990/debian sid/main amd64 libdrm2 amd64 2.4.107-8 [44.0 kB] Get:88 http://127.0.0.1:12990/debian sid/main amd64 libdrm-amdgpu1 amd64 2.4.107-8 [29.0 kB] Get:89 http://127.0.0.1:12990/debian sid/main amd64 libpciaccess0 amd64 0.16-1 [53.6 kB] Get:90 http://127.0.0.1:12990/debian sid/main amd64 libdrm-intel1 amd64 2.4.107-8 [72.5 kB] Get:91 http://127.0.0.1:12990/debian sid/main amd64 libdrm-radeon1 amd64 2.4.107-8 [30.6 kB] Get:92 http://127.0.0.1:12990/debian sid/main amd64 libdrm-nouveau2 amd64 2.4.107-8 [27.3 kB] Get:93 http://127.0.0.1:12990/debian sid/main amd64 libpciaccess-dev amd64 0.16-1 [56.9 kB] Get:94 http://127.0.0.1:12990/debian sid/main amd64 libdrm-dev amd64 2.4.107-8 [273 kB] Get:95 http://127.0.0.1:12990/debian sid/main amd64 libevent-2.1-7 amd64 2.1.12-stable-1 [188 kB] Get:96 http://127.0.0.1:12990/debian sid/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-1 [139 kB] Get:97 http://127.0.0.1:12990/debian sid/main amd64 libevent-extra-2.1-7 amd64 2.1.12-stable-1 [110 kB] Get:98 http://127.0.0.1:12990/debian sid/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-1 [57.1 kB] Get:99 http://127.0.0.1:12990/debian sid/main amd64 libevent-openssl-2.1-7 amd64 2.1.12-stable-1 [64.1 kB] Get:100 http://127.0.0.1:12990/debian sid/main amd64 libevent-dev amd64 2.1.12-stable-1 [311 kB] Get:101 http://127.0.0.1:12990/debian sid/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.1 [169 kB] Get:102 http://127.0.0.1:12990/debian sid/main amd64 libnuma1 amd64 2.0.14-3 [24.4 kB] Get:103 http://127.0.0.1:12990/debian sid/main amd64 libpsm2-2 amd64 11.2.185-1 [181 kB] Get:104 http://127.0.0.1:12990/debian sid/main amd64 librdmacm1 amd64 36.0-1 [69.1 kB] Get:105 http://127.0.0.1:12990/debian sid/main amd64 libfabric1 amd64 1.11.0-2 [521 kB] Get:106 http://127.0.0.1:12990/debian sid/main amd64 libffi-dev amd64 3.4.2-3 [60.4 kB] Get:107 http://127.0.0.1:12990/debian sid/main amd64 libglvnd0 amd64 1.3.4-2+b1 [51.7 kB] Get:108 http://127.0.0.1:12990/debian sid/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:109 http://127.0.0.1:12990/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:110 http://127.0.0.1:12990/debian sid/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get:111 http://127.0.0.1:12990/debian sid/main amd64 libx11-data all 2:1.7.2-2 [311 kB] Get:112 http://127.0.0.1:12990/debian sid/main amd64 libx11-6 amd64 2:1.7.2-2+b1 [772 kB] Get:113 http://127.0.0.1:12990/debian sid/main amd64 libglapi-mesa amd64 21.2.4-1 [74.9 kB] Get:114 http://127.0.0.1:12990/debian sid/main amd64 libx11-xcb1 amd64 2:1.7.2-2+b1 [203 kB] Get:115 http://127.0.0.1:12990/debian sid/main amd64 libxcb-dri2-0 amd64 1.14-3 [103 kB] Get:116 http://127.0.0.1:12990/debian sid/main amd64 libxcb-dri3-0 amd64 1.14-3 [102 kB] Get:117 http://127.0.0.1:12990/debian sid/main amd64 libxcb-glx0 amd64 1.14-3 [118 kB] Get:118 http://127.0.0.1:12990/debian sid/main amd64 libxcb-present0 amd64 1.14-3 [101 kB] Get:119 http://127.0.0.1:12990/debian sid/main amd64 libxcb-shm0 amd64 1.14-3 [101 kB] Get:120 http://127.0.0.1:12990/debian sid/main amd64 libxcb-sync1 amd64 1.14-3 [105 kB] Get:121 http://127.0.0.1:12990/debian sid/main amd64 libxcb-xfixes0 amd64 1.14-3 [105 kB] Get:122 http://127.0.0.1:12990/debian sid/main amd64 libxext6 amd64 2:1.3.4-1 [53.1 kB] Get:123 http://127.0.0.1:12990/debian sid/main amd64 libxfixes3 amd64 1:5.0.3-2 [22.1 kB] Get:124 http://127.0.0.1:12990/debian sid/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get:125 http://127.0.0.1:12990/debian sid/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:126 http://127.0.0.1:12990/debian sid/main amd64 libsensors-config all 1:3.6.0-7 [32.3 kB] Get:127 http://127.0.0.1:12990/debian sid/main amd64 libsensors5 amd64 1:3.6.0-7 [52.3 kB] Get:128 http://127.0.0.1:12990/debian sid/main amd64 libvulkan1 amd64 1.2.189.0-2 [104 kB] Get:129 http://127.0.0.1:12990/debian sid/main amd64 libgl1-mesa-dri amd64 21.2.4-1 [10.3 MB] Get:130 http://127.0.0.1:12990/debian sid/main amd64 libglx-mesa0 amd64 21.2.4-1 [184 kB] Get:131 http://127.0.0.1:12990/debian sid/main amd64 libglx0 amd64 1.3.4-2+b1 [36.5 kB] Get:132 http://127.0.0.1:12990/debian sid/main amd64 libgl1 amd64 1.3.4-2+b1 [89.6 kB] Get:133 http://127.0.0.1:12990/debian sid/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get:134 http://127.0.0.1:12990/debian sid/main amd64 x11proto-dev all 2021.5-1 [599 kB] Get:135 http://127.0.0.1:12990/debian sid/main amd64 libxau-dev amd64 1:1.0.9-1 [22.9 kB] Get:136 http://127.0.0.1:12990/debian sid/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [42.2 kB] Get:137 http://127.0.0.1:12990/debian sid/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get:138 http://127.0.0.1:12990/debian sid/main amd64 libpthread-stubs0-dev amd64 0.4-1 [5344 B] Get:139 http://127.0.0.1:12990/debian sid/main amd64 libxcb1-dev amd64 1.14-3 [176 kB] Get:140 http://127.0.0.1:12990/debian sid/main amd64 libx11-dev amd64 2:1.7.2-2+b1 [844 kB] Get:141 http://127.0.0.1:12990/debian sid/main amd64 libglx-dev amd64 1.3.4-2+b1 [16.9 kB] Get:142 http://127.0.0.1:12990/debian sid/main amd64 libgl-dev amd64 1.3.4-2+b1 [101 kB] Get:143 http://127.0.0.1:12990/debian sid/main amd64 libglib2.0-0 amd64 2.70.0-3 [1401 kB] Get:144 http://127.0.0.1:12990/debian sid/main amd64 libglib2.0-data all 2.70.0-3 [1189 kB] Get:145 http://127.0.0.1:12990/debian sid/main amd64 libglib2.0-bin amd64 2.70.0-3 [145 kB] Get:146 http://127.0.0.1:12990/debian sid/main amd64 python3-lib2to3 all 3.9.7-1 [79.4 kB] Get:147 http://127.0.0.1:12990/debian sid/main amd64 python3-distutils all 3.9.7-1 [146 kB] Get:148 http://127.0.0.1:12990/debian sid/main amd64 libglib2.0-dev-bin amd64 2.70.0-3 [183 kB] Get:149 http://127.0.0.1:12990/debian sid/main amd64 libsepol1-dev amd64 3.1-1 [338 kB] Get:150 http://127.0.0.1:12990/debian sid/main amd64 libpcre2-16-0 amd64 10.36-2 [231 kB] Get:151 http://127.0.0.1:12990/debian sid/main amd64 libpcre2-32-0 amd64 10.36-2 [220 kB] Get:152 http://127.0.0.1:12990/debian sid/main amd64 libpcre2-posix2 amd64 10.36-2 [49.1 kB] Get:153 http://127.0.0.1:12990/debian sid/main amd64 libpcre2-dev amd64 10.36-2 [731 kB] Get:154 http://127.0.0.1:12990/debian sid/main amd64 libselinux1-dev amd64 3.1-3 [168 kB] Get:155 http://127.0.0.1:12990/debian sid/main amd64 libmount-dev amd64 2.37.2-4 [79.0 kB] Get:156 http://127.0.0.1:12990/debian sid/main amd64 libpcre16-3 amd64 2:8.39-13 [259 kB] Get:157 http://127.0.0.1:12990/debian sid/main amd64 libpcre32-3 amd64 2:8.39-13 [250 kB] Get:158 http://127.0.0.1:12990/debian sid/main amd64 libpcrecpp0v5 amd64 2:8.39-13 [152 kB] Get:159 http://127.0.0.1:12990/debian sid/main amd64 libpcre3-dev amd64 2:8.39-13 [650 kB] Get:160 http://127.0.0.1:12990/debian sid/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:161 http://127.0.0.1:12990/debian sid/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2 [190 kB] Get:162 http://127.0.0.1:12990/debian sid/main amd64 libglib2.0-dev amd64 2.70.0-3 [1599 kB] Get:163 http://127.0.0.1:12990/debian sid/main amd64 libhwloc15 amd64 2.5.0+dfsg-2 [154 kB] Get:164 http://127.0.0.1:12990/debian sid/main amd64 libnuma-dev amd64 2.0.14-3 [37.8 kB] Get:165 http://127.0.0.1:12990/debian sid/main amd64 libltdl7 amd64 2.4.6-15 [391 kB] Get:166 http://127.0.0.1:12990/debian sid/main amd64 libltdl-dev amd64 2.4.6-15 [162 kB] Get:167 http://127.0.0.1:12990/debian sid/main amd64 libhwloc-dev amd64 2.5.0+dfsg-2 [239 kB] Get:168 http://127.0.0.1:12990/debian sid/main amd64 libxnvctrl0 amd64 470.57.02-2 [27.1 kB] Get:169 http://127.0.0.1:12990/debian sid/main amd64 ocl-icd-libopencl1 amd64 2.2.14-3 [42.6 kB] Get:170 http://127.0.0.1:12990/debian sid/main amd64 libhwloc-plugins amd64 2.5.0+dfsg-2 [21.6 kB] Get:171 http://127.0.0.1:12990/debian sid/main amd64 libnl-3-dev amd64 3.4.0-1+b1 [102 kB] Get:172 http://127.0.0.1:12990/debian sid/main amd64 libnl-route-3-dev amd64 3.4.0-1+b1 [176 kB] Get:173 http://127.0.0.1:12990/debian sid/main amd64 libibverbs-dev amd64 36.0-1 [533 kB] Get:174 http://127.0.0.1:12990/debian sid/main amd64 libint1 amd64 1.2.1-6 [7512 kB] Get:175 http://127.0.0.1:12990/debian sid/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-8 [315 kB] Get:176 http://127.0.0.1:12990/debian sid/main amd64 libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get:177 http://127.0.0.1:12990/debian sid/main amd64 liblapack3 amd64 3.10.0-1 [2213 kB] Get:178 http://127.0.0.1:12990/debian sid/main amd64 liblapack-dev amd64 3.10.0-1 [4328 kB] Get:179 http://127.0.0.1:12990/debian sid/main amd64 libmopac7-1gf amd64 1.15-6+b3 [470 kB] Get:180 http://127.0.0.1:12990/debian sid/main amd64 libmopac7-dev amd64 1.15-6+b3 [552 kB] Get:181 http://127.0.0.1:12990/debian sid/main amd64 libpmix2 amd64 4.1.1~rc4-1 [572 kB] Get:182 http://127.0.0.1:12990/debian sid/main amd64 libucx0 amd64 1.11.2-1 [765 kB] Get:183 http://127.0.0.1:12990/debian sid/main amd64 libopenmpi3 amd64 4.1.2~rc1-4 [2388 kB] Get:184 http://127.0.0.1:12990/debian sid/main amd64 openmpi-common all 4.1.2~rc1-4 [183 kB] Get:185 http://127.0.0.1:12990/debian sid/main amd64 libpmix-dev amd64 4.1.1~rc4-1 [715 kB] Get:186 http://127.0.0.1:12990/debian sid/main amd64 openmpi-bin amd64 4.1.2~rc1-4 [241 kB] Get:187 http://127.0.0.1:12990/debian sid/main amd64 libopenmpi-dev amd64 4.1.2~rc1-4 [986 kB] Get:188 http://127.0.0.1:12990/debian sid/main amd64 libsc-data all 2.3.1-21 [120 kB] Get:189 http://127.0.0.1:12990/debian sid/main amd64 libsc7v5 amd64 2.3.1-21 [2328 kB] Get:190 http://127.0.0.1:12990/debian sid/main amd64 mpi-default-dev amd64 1.14 [5548 B] Get:191 http://127.0.0.1:12990/debian sid/main amd64 libsc-dev amd64 2.3.1-21 [317 kB] Get:192 http://127.0.0.1:12990/debian sid/main amd64 mesa-common-dev amd64 21.2.4-1 [1544 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 126 MB in 1s (123 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 14272 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.37.2-4_amd64.deb ... Unpacking bsdextrautils (2.37.2-4) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-7_amd64.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../05-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. 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Preparing to unpack .../0-python3-minimal_3.9.2-3_amd64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../2-libmpdec3_2.5.1-2_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-2) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../3-libncursesw6_6.2+20210905-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.2+20210905-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.1-2_all.deb ... Unpacking readline-common (8.1-2) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../5-libreadline8_8.1-2_amd64.deb ... Unpacking libreadline8:amd64 (8.1-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../6-libsqlite3-0_3.36.0-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.36.0-2) ... Selecting previously unselected package libpython3.9-stdlib:amd64. Preparing to unpack .../7-libpython3.9-stdlib_3.9.7-4_amd64.deb ... Unpacking libpython3.9-stdlib:amd64 (3.9.7-4) ... Selecting previously unselected package python3.9. Preparing to unpack .../8-python3.9_3.9.7-4_amd64.deb ... Unpacking python3.9 (3.9.7-4) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../9-libpython3-stdlib_3.9.2-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... 15745 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_amd64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package netbase. Preparing to unpack .../001-netbase_6.3_all.deb ... Unpacking netbase (6.3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package openssl. Preparing to unpack .../003-openssl_1.1.1l-1_amd64.deb ... Unpacking openssl (1.1.1l-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../004-ca-certificates_20211016_all.deb ... Unpacking ca-certificates (20211016) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../006-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. 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Setting up libhtml-tagset-perl (3.20-4) ... Setting up libxcb-glx0:amd64 (1.14-3) ... Setting up libcbor0.8:amd64 (0.8.0-1) ... Setting up libdebhelper-perl (13.5.2) ... Setting up libsqlite3-0:amd64 (3.36.0-2) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up libsensors-config (1:3.6.0-7) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up libsepol1-dev:amd64 (3.1-1) ... Setting up perl-openssl-defaults:amd64 (5) ... Setting up gettext-base (0.21-4) ... Setting up libencode-locale-perl (1.05-1.1) ... Setting up libxcb-shm0:amd64 (1.14-3) ... Setting up libint1 (1.2.1-6) ... Setting up file (1:5.39-3) ... Setting up libffi-dev:amd64 (3.4.2-3) ... Setting up libpthread-stubs0-dev:amd64 (0.4-1) ... Setting up libpcre2-16-0:amd64 (10.36-2) ... Setting up libxcb-present0:amd64 (1.14-3) ... Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libpcre2-32-0:amd64 (10.36-2) ... Setting up libblas3:amd64 (3.10.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libglib2.0-data (2.70.0-3) ... Setting up libx11-data (2:1.7.2-2) ... Setting up libxcb-sync1:amd64 (1.14-3) ... Setting up uuid-dev:amd64 (2.37.2-4) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up libhwloc15:amd64 (2.5.0+dfsg-2) ... Setting up libpcre32-3:amd64 (2:8.39-13) ... Setting up libevent-core-2.1-7:amd64 (2.1.12-stable-1) ... Setting up libevent-2.1-7:amd64 (2.1.12-stable-1) ... Setting up libio-html-perl (1.004-2) ... Setting up autopoint (0.21-4) ... Setting up libsc-data (2.3.1-21) ... Setting up pkg-config (0.29.2-1) ... Setting up libpcre2-posix2:amd64 (10.36-2) ... Setting up libsensors5:amd64 (1:3.6.0-7) ... Setting up libncursesw6:amd64 (6.2+20210905-1) ... Setting up libltdl7:amd64 (2.4.6-15) ... Setting up libglapi-mesa:amd64 (21.2.4-1) ... 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Setting up libpsm-infinipath1 (3.3+20.604758e7-6.1) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-8) ... Setting up libfido2-1:amd64 (1.8.0-1+b1) ... Setting up openssl (1.1.1l-1) ... Setting up libdrm-common (2.4.107-8) ... Setting up readline-common (8.1-2) ... Setting up liburi-perl (5.08-1) ... Setting up libblas-dev:amd64 (3.10.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-1) ... Setting up libnet-ssleay-perl (1.88-3+b1) ... Setting up x11proto-dev (2021.5-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-2) ... Setting up libxcb-dri3-0:amd64 (1.14-3) ... Setting up libblkid-dev:amd64 (2.37.2-4) ... Setting up libx11-xcb1:amd64 (2:1.7.2-2+b1) ... Setting up libhttp-date-perl (6.05-1) ... Setting up libevent-extra-2.1-7:amd64 (2.1.12-stable-1) ... Setting up liblapack3:amd64 (3.10.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.21-4) ... Setting up libfile-listing-perl (6.14-1) ... Setting up libxau-dev:amd64 (1:1.0.9-1) ... Setting up libpcre2-dev:amd64 (10.36-2) ... Setting up libtool (2.4.6-15) ... Setting up libselinux1-dev:amd64 (3.1-3) ... Setting up libpcre3-dev:amd64 (2:8.39-13) ... Setting up libgfortran-11-dev:amd64 (11.2.0-10) ... Setting up openssh-client (1:8.4p1-6) ... Setting up libreadline8:amd64 (8.1-2) ... Setting up libxext6:amd64 (2:1.3.4-1) ... Setting up libevent-openssl-2.1-7:amd64 (2.1.12-stable-1) ... Setting up libglib2.0-bin (2.70.0-3) ... Setting up libnet-http-perl (6.21-1) ... Setting up m4 (1.4.18-5) ... Setting up libmopac7-1gf (1.15-6+b3) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libnuma-dev:amd64 (2.0.14-3) ... Setting up libnl-route-3-200:amd64 (3.4.0-1+b1) ... Setting up libxnvctrl0:amd64 (470.57.02-2) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libxdmcp-dev:amd64 (1:1.1.2-3) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8) ... Setting up libxfixes3:amd64 (1:5.0.3-2) ... Setting up libevent-dev (2.1.12-stable-1) ... Setting up liblapack-dev:amd64 (3.10.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up gfortran-11 (11.2.0-10) ... Setting up autoconf (2.71-2) ... Setting up dh-strip-nondeterminism (1.12.0-2) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdrm2:amd64 (2.4.107-8) ... Setting up libnl-3-dev:amd64 (3.4.0-1+b1) ... Setting up groff-base (1.22.4-7) ... Setting up libhtml-parser-perl:amd64 (3.76-1) ... Setting up libmount-dev:amd64 (2.37.2-4) ... Setting up libio-socket-ssl-perl (2.072-1) ... Setting up libpython3.9-stdlib:amd64 (3.9.7-4) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up libhttp-message-perl (6.33-1) ... Setting up libdrm-amdgpu1:amd64 (2.4.107-8) ... Setting up automake (1:1.16.5-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libibverbs1:amd64 (36.0-1) ... Setting up flex (2.6.4-8) ... Setting up libdrm-nouveau2:amd64 (2.4.107-8) ... Setting up libxcb1-dev:amd64 (1.14-3) ... Setting up ibverbs-providers:amd64 (36.0-1) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libdrm-radeon1:amd64 (2.4.107-8) ... Setting up libmopac7-dev (1.15-6+b3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libdrm-intel1:amd64 (2.4.107-8) ... Setting up libgl1-mesa-dri:amd64 (21.2.4-1) ... Setting up libx11-dev:amd64 (2:1.7.2-2+b1) ... Setting up libhwloc-plugins:amd64 (2.5.0+dfsg-2) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:11.2.0-2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up dh-autoreconf (20) ... Setting up libnl-route-3-dev:amd64 (3.4.0-1+b1) ... Setting up libltdl-dev:amd64 (2.4.6-15) ... Setting up libhwloc-dev:amd64 (2.5.0+dfsg-2) ... Setting up python3.9 (3.9.7-4) ... Setting up librdmacm1:amd64 (36.0-1) ... Setting up libucx0:amd64 (1.11.2-1) ... Setting up libdrm-dev:amd64 (2.4.107-8) ... Setting up libglx-mesa0:amd64 (21.2.4-1) ... Setting up libglx0:amd64 (1.3.4-2+b1) ... Setting up libpmix2:amd64 (4.1.1~rc4-1) ... Setting up debhelper (13.5.2) ... Setting up python3 (3.9.2-3) ... Setting up libibverbs-dev:amd64 (36.0-1) ... Setting up libgl1:amd64 (1.3.4-2+b1) ... Setting up libglx-dev:amd64 (1.3.4-2+b1) ... Setting up python3-lib2to3 (3.9.7-1) ... Setting up libgl-dev:amd64 (1.3.4-2+b1) ... Setting up libpmix-dev:amd64 (4.1.1~rc4-1) ... Setting up python3-distutils (3.9.7-1) ... Setting up libfabric1 (1.11.0-2) ... Setting up libglib2.0-dev-bin (2.70.0-3) ... Setting up libopenmpi3:amd64 (4.1.2~rc1-4) ... Setting up libglib2.0-dev:amd64 (2.70.0-3) ... Setting up libsc7v5 (2.3.1-21) ... Setting up mesa-common-dev:amd64 (21.2.4-1) ... Setting up openmpi-bin (4.1.2~rc1-4) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:amd64 (4.1.2~rc1-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up mpi-default-dev (1.14) ... Setting up libsc-dev (2.3.1-21) ... Setting up libwww-perl (6.57-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up libxml-parser-perl:amd64 (2.46-2) ... Setting up intltool (0.51.0-6) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-4) ... Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-cloud-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.37-7 dpkg-dev_1.20.9 g++-11_11.2.0-10 gcc-11_11.2.0-10 libc6-dev_2.32-4 libstdc++-11-dev_11.2.0-10 libstdc++6_11.2.0-10 linux-libc-dev_5.14.12-1 Package versions: adduser_3.118 apt_2.3.11 autoconf_2.71-2 automake_1:1.16.5-1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.52 bash_5.1-3+b2 binutils_2.37-7 binutils-common_2.37-7 binutils-x86-64-linux-gnu_2.37-7 bsdextrautils_2.37.2-4 bsdutils_1:2.37.2-4 build-essential_12.9 bzip2_1.0.8-4 ca-certificates_20211016 clang-12_1:12.0.1-15 coreutils_8.32-4+b1 cpp_4:11.2.0-2 cpp-11_11.2.0-10 dash_0.5.11+git20210120+802ebd4-2 debconf_1.5.78 debhelper_13.5.2 debian-archive-keyring_2021.1.1 debianutils_5.5-1 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-2 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.4-1 fakeroot_1.26-1 file_1:5.39-3 findutils_4.8.0-1 flex_2.6.4-8 g++_4:11.2.0-2 g++-11_11.2.0-10 gcc_4:11.2.0-2 gcc-10-base_10.3.0-11 gcc-11_11.2.0-10 gcc-11-base_11.2.0-10 gcc-9-base_9.4.0-3 gettext_0.21-4 gettext-base_0.21-4 gfortran_4:11.2.0-2 gfortran-11_11.2.0-10 gpgv_2.2.27-2 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4 hostname_3.23 ibverbs-providers_36.0-1 init-system-helpers_1.60 intltool_0.51.0-6 intltool-debian_0.35.0+20060710.5 lib32gcc-s1_11.2.0-10 lib32stdc++6_11.2.0-10 libacl1_2.3.1-1 libapt-pkg6.0_2.3.11 libarchive-zip-perl_1.68-1 libasan5_9.4.0-3 libasan6_11.2.0-10 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libx11-6_2:1.7.2-2+b1 libx11-data_2:1.7.2-2 libx11-dev_2:1.7.2-2+b1 libx11-xcb1_2:1.7.2-2+b1 libxau-dev_1:1.0.9-1 libxau6_1:1.0.9-1 libxcb-dri2-0_1.14-3 libxcb-dri3-0_1.14-3 libxcb-glx0_1.14-3 libxcb-present0_1.14-3 libxcb-shm0_1.14-3 libxcb-sync1_1.14-3 libxcb-xfixes0_1.14-3 libxcb1_1.14-3 libxcb1-dev_1.14-3 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxfixes3_1:5.0.3-2 libxml-parser-perl_2.46-2 libxml2_2.9.12+dfsg-5 libxnvctrl0_470.57.02-2 libxshmfence1_1.3-1 libxxf86vm1_1:1.1.4-1+b2 libxxhash0_0.8.0-2 libz3-4_4.8.12-1+b1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.14.12-1 llvm-12-linker-tools_1:12.0.1-15 login_1:4.8.1-1 logsave_1.46.4-1 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 media-types_4.0.0 mesa-common-dev_21.2.4-1 mount_2.37.2-4 mpi-default-dev_1.14 ncurses-base_6.2+20210905-1 ncurses-bin_6.2+20210905-1 netbase_6.3 ocl-icd-libopencl1_2.2.14-3 openmpi-bin_4.1.2~rc1-4 openmpi-common_4.1.2~rc1-4 openssh-client_1:8.4p1-6 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Source: libghemical Binary: libghemical-dev, libghemical5v5, libghemical-data Architecture: any all Version: 3.0.0-4.3 Maintainer: Debichem Team Uploaders: Michael Banck Homepage: http://bioinformatics.org/ghemical/ghemical/ Standards-Version: 4.5.0 Vcs-Browser: https:https://salsa.debian.org/debichem-team/libghemical Vcs-Git: https://salsa.debian.org:/debichem-team/libghemical.git Build-Depends: debhelper-compat (= 12), gfortran | fortran-compiler, flex, intltool (>= 0.40.0), pkg-config (>= 0.9.0), libblas-dev, liblapack-dev, libmopac7-dev (>= 1.14), libsc-dev (>= 2.3.1-2), mesa-common-dev, libglib2.0-dev Package-List: libghemical-data deb science optional arch=all libghemical-dev deb libdevel optional arch=any libghemical5v5 deb libs optional arch=any Checksums-Sha1: 330fd33968182ba383d0309e72a36f3c8bd02904 787947 libghemical_3.0.0.orig.tar.gz 54e2aba86bbbf3f132e97c1ee443166de66fc2b1 5248 libghemical_3.0.0-4.3.debian.tar.xz Checksums-Sha256: db8c3add0aa1f94c21016d60fa3f66fb194e56b8e9fceaa3860c603700efc3ac 787947 libghemical_3.0.0.orig.tar.gz 5164a94b9e336f68dd72af80608896dd9c7d80967adef0d3c9d2fbd848e0db60 5248 libghemical_3.0.0-4.3.debian.tar.xz Files: 1d5c9c19bb119470d2bb41a7e681eafd 787947 libghemical_3.0.0.orig.tar.gz c255917388fd13ea6fd0da58a0f779ea 5248 libghemical_3.0.0-4.3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEgjg86RZbNHx4cIGiy+a7Tl2a06UFAl7XlBYACgkQy+a7Tl2a 06W4/BAAgWhr9iEi+Usm+AfTSWQf1ufP8Z/6nlWxvv7LXdbt/CcBx3IrKadoYSqD jgpTIcZxQxgXLaTfPG+8zboEnVu+Qb0UqYXoJCyon60aIiakunTZeF6PZMeF++yO /F4/bWxiPPb/oApXPzXBI2DGG0e6Sthn6EEIqxQSdWJXjOEzRBSsSoTeA8cLgNYG 0TdxzxwNWAzYcPdLr1CXfHq9Lm2UuyswxV05xYDaBklLkPjfemL4hyoWAWFGpt43 eMYYAuM8vltrlpOpHN1iH9j8lMn1tDXYG6+cGnpVAFZ22Pt4rThlc/KJJuTvAQCh 7HBgTH9+rqIDVGpeNaOvCpKr+NspiMqosvxgoSR9DC5PHidmHe5js1JEUSu8x58j d47eTtLDVtoNiKNLcEoRyf7LdzSRWzyh/8Lyt7eGFwfPCwqtWFB2WQ29EULYIeYq gPpG7mRrgmM3AY9z7nYsG2urvvRsjJvOoHonxdG/wXdM+pV/rfRlQNChBVdKEf0a GoRV8IgS95N2Z38pH31+QwonvGi2iqnwr0M0ddwzaDxl+VK/kQDJDRIdVIzAOT2R Lk4t9NSuNC5rdTHAs7ugBNXu4pojxShVAJylkWtGYtlmcT+cUaNQvt46SUa/8fhO k67uA5Sjkp27G0Iq1UM0p/ckRxM4Lg9XLLrrcgChmHZRVnBSVpk= =4O5V -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.0IUUlPL7/trustedkeys.kbx': General error gpgv: Signature made Wed Jun 3 12:14:14 2020 UTC gpgv: using RSA key 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libghemical_3.0.0-4.3.dsc dpkg-source: info: extracting libghemical in /<> dpkg-source: info: unpacking libghemical_3.0.0.orig.tar.gz dpkg-source: info: unpacking libghemical_3.0.0-4.3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-underlinking.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=sid-amd64-sbuild-b15cc5d5-440e-4440-a7b2-e84acc5d7046 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -b -rfakeroot dpkg-buildpackage: info: source package libghemical dpkg-buildpackage: info: source version 3.0.0-4.3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alastair McKinstry dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --parallel --with autoreconf dh_clean debian/rules build dh build --parallel --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. configure.ac:26: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:26: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10785: AM_CONFIG_HEADER is expanded from... configure.ac:26: the top level configure.ac:32: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:32: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10785: AM_CONFIG_HEADER is expanded from... configure.ac:32: the top level configure.ac:91: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:91: You should run autoupdate. aclocal.m4:798: AC_PROG_LIBTOOL is expanded from... configure.ac:91: the top level configure.ac:105: warning: The macro `GLIB_GNU_GETTEXT' is obsolete. configure.ac:105: You should run autoupdate. aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... aclocal.m4:73: GLIB_LC_MESSAGES is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_OUTPUT_COMMANDS' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/status.m4:1025: AC_OUTPUT_COMMANDS is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:126: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:126: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:164: warning: The macro `AC_PROG_CC_STDC' is obsolete. configure.ac:164: You should run autoupdate. ./lib/autoconf/c.m4:1666: AC_PROG_CC_STDC is expanded from... configure.ac:164: the top level configure.ac:176: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:176: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:176: the top level configure.ac:86: installing './compile' configure.ac:42: installing './missing' /usr/share/automake-1.16/am/ltlibrary.am: warning: 'libghemical.la': linking libtool libraries using a non-POSIX /usr/share/automake-1.16/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac' src/Makefile.am:1: while processing Libtool library 'libghemical.la' src/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --enable-mpqc --enable-mopac7 --disable-sctest ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-mpqc --enable-mopac7 --disable-sctest checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ar... /usr/bin/ar checking for sh... /bin/bash checking whether make sets $(MAKE)... (cached) yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking whether NLS is requested... yes checking for intltool >= 0.40.0... 0.51.0 found checking for intltool-update... /usr/bin/intltool-update checking for intltool-merge... /usr/bin/intltool-merge checking for intltool-extract... /usr/bin/intltool-extract checking for xgettext... /usr/bin/xgettext checking for msgmerge... /usr/bin/msgmerge checking for msgfmt... /usr/bin/msgfmt checking for gmsgfmt... /usr/bin/msgfmt checking for perl... /usr/bin/perl checking for perl >= 5.8.1... 5.32.1 checking for XML::Parser... ok checking for locale.h... yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for libintl.h... yes checking for ngettext in libc... yes checking for dgettext in libc... yes checking for bind_textdomain_codeset... yes checking for msgfmt... (cached) /usr/bin/msgfmt checking for dcgettext... yes checking if msgfmt accepts -c... yes checking for gmsgfmt... (cached) /usr/bin/msgfmt checking for xgettext... (cached) /usr/bin/xgettext checking whether build environment is sane... yes checking for acos in -lm... yes checking for main in -lblas... yes checking for main in -llapack... yes checking for sc-config... /usr/bin/sc-config checking SC - version... yes checking for libmopac7 >= 1.13... yes checking for GL/gl.h... yes checking for inline... inline checking for an ANSI C-conforming const... yes checking for egrep... (cached) /bin/grep -E configure: build options: ^^^^^^^^^^^^^^ enable MPQC : yes enable MOPAC7 : yes checking that generated files are newer than configure... done checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating libghemical.pc config.status: creating Makefile config.status: creating bin/Makefile config.status: creating bin/amber/Makefile config.status: creating bin/builder/Makefile config.status: creating bin/param_mm/Makefile config.status: creating bin/param_mm/default/Makefile config.status: creating bin/param_mm/prmfit/Makefile config.status: creating bin/param_mm/tripos52/Makefile config.status: creating bin/param_sf/Makefile config.status: creating bin/param_sf/default/Makefile config.status: creating po/Makefile.in config.status: creating src/Makefile config.status: creating src/libghemicalconfig.h config.status: creating src/libghemical-features.h config.status: executing src/libghemicalconfig2.h commands config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing stamp.h commands config.status: executing po/stamp-it commands make[1]: Leaving directory '/<>' dh_auto_build make -j4 make[1]: Entering directory '/<>' Making all in src make[2]: Entering directory '/<>/src' make all-am make[3]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o atom.lo atom.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o bond.lo bond.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o constraint.lo constraint.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o model.lo model.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c atom.cpp -fPIC -DPIC -o .libs/atom.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c model.cpp -fPIC -DPIC -o .libs/model.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bond.cpp -fPIC -DPIC -o .libs/bond.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c constraint.cpp -fPIC -DPIC -o .libs/constraint.o atom.cpp:33:44: warning: ISO C++11 does not allow conversion from string literal to 'char *' [-Wwritable-strings] element element::current_element = element("C"); ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c constraint.cpp -o constraint.o >/dev/null 2>&1 In file included from model.cpp:31: ./eng1_qm.h:128:148: warning: non-void function does not return a value [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ ./eng1_qm.h:129:135: warning: non-void function does not return a value [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ 1 warning generated. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c atom.cpp -o atom.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bond.cpp -o bond.o >/dev/null 2>&1 In file included from model.cpp:35: ./eng2_qm_mm.h:90:148: warning: non-void function does not return a value [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ ./eng2_qm_mm.h:91:135: warning: non-void function does not return a value [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ ./eng2_qm_mm.h:127:148: warning: non-void function does not return a value [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ ./eng2_qm_mm.h:128:135: warning: non-void function does not return a value [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ In file included from model.cpp:46: In file included from ./local_i18n.h:38: ./libghemicalconfig.h:102:9: warning: 'PACKAGE_NAME' macro redefined [-Wmacro-redefined] #define PACKAGE_NAME "libghemical" ^ /usr/include/sc/scconfig.h:281:9: note: previous definition is here #define PACKAGE_NAME "" ^ In file included from model.cpp:46: In file included from ./local_i18n.h:38: ./libghemicalconfig.h:105:9: warning: 'PACKAGE_STRING' macro redefined [-Wmacro-redefined] #define PACKAGE_STRING "libghemical 3.0.0" ^ /usr/include/sc/scconfig.h:284:9: note: previous definition is here #define PACKAGE_STRING "" ^ In file included from model.cpp:46: In file included from ./local_i18n.h:38: ./libghemicalconfig.h:108:9: warning: 'PACKAGE_TARNAME' macro redefined [-Wmacro-redefined] #define PACKAGE_TARNAME "libghemical" ^ /usr/include/sc/scconfig.h:287:9: note: previous definition is here #define PACKAGE_TARNAME "" ^ In file included from model.cpp:46: In file included from ./local_i18n.h:38: ./libghemicalconfig.h:114:9: warning: 'PACKAGE_VERSION' macro redefined [-Wmacro-redefined] #define PACKAGE_VERSION "3.0.0" ^ /usr/include/sc/scconfig.h:293:9: note: previous definition is here #define PACKAGE_VERSION "" ^ model.cpp:320:1: warning: non-void function does not return a value in all control paths [-Wreturn-type] } ^ /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o engine.lo engine.cpp model.cpp:1755:31: warning: logical not is only applied to the left hand side of this bitwise operator [-Wlogical-not-parentheses] if (some_atoms_selected && (!(* it1).flags & ATOMFLAG_USER_SELECTED)) ^ ~ model.cpp:1755:31: note: add parentheses after the '!' to evaluate the bitwise operator first if (some_atoms_selected && (!(* it1).flags & ATOMFLAG_USER_SELECTED)) ^ ( ) model.cpp:1755:31: note: add parentheses around left hand side expression to silence this warning if (some_atoms_selected && (!(* it1).flags & ATOMFLAG_USER_SELECTED)) ^ ( ) libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c engine.cpp -fPIC -DPIC -o .libs/engine.o model.cpp:2566:20: error: non-constant-expression cannot be narrowed from type 'double' to 'fGL' (aka 'float') in initializer list [-Wc++11-narrowing] fGL crdH2[3] = { cos(angle)*0.095, sin(angle)*0.095, 0.0 }; ^~~~~~~~~~~~~~~~ model.cpp:2566:20: note: insert an explicit cast to silence this issue fGL crdH2[3] = { cos(angle)*0.095, sin(angle)*0.095, 0.0 }; ^~~~~~~~~~~~~~~~ static_cast( ) model.cpp:2566:38: error: non-constant-expression cannot be narrowed from type 'double' to 'fGL' (aka 'float') in initializer list [-Wc++11-narrowing] fGL crdH2[3] = { cos(angle)*0.095, sin(angle)*0.095, 0.0 }; ^~~~~~~~~~~~~~~~ model.cpp:2566:38: note: insert an explicit cast to silence this issue fGL crdH2[3] = { cos(angle)*0.095, sin(angle)*0.095, 0.0 }; ^~~~~~~~~~~~~~~~ static_cast( ) model.cpp:4441:82: warning: illegal character encoding in string literal [-Winvalid-source-encoding] txts << "displacement " << b_tab[ac] << " nm^2 = " << (b_tab[ac] * 100.0) << " ^2 "; ^~~~ /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o typerule.lo typerule.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c typerule.cpp -fPIC -DPIC -o .libs/typerule.o 13 warnings and 2 errors generated. make[3]: *** [Makefile:644: model.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... typerule.cpp:172:22: error: non-constant-expression cannot be narrowed from type 'size_t' (aka 'unsigned long') to 'i32s' (aka 'int') in initializer list [-Wc++11-narrowing] i32s tmp1[2] = { strlen(buffer), 0 }; ^~~~~~~~~~~~~~ typerule.cpp:172:22: note: insert an explicit cast to silence this issue i32s tmp1[2] = { strlen(buffer), 0 }; ^~~~~~~~~~~~~~ static_cast( ) 1 error generated. make[3]: *** [Makefile:644: typerule.lo] Error 1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c engine.cpp -o engine.o >/dev/null 2>&1 make[3]: Leaving directory '/<>/src' make[2]: *** [Makefile:484: all] Error 2 make[2]: Leaving directory '/<>/src' make[1]: *** [Makefile:485: all-recursive] Error 1 make[1]: Leaving directory '/<>' dh_auto_build: error: make -j4 returned exit code 2 make: *** [debian/rules:10: build] Error 25 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2021-10-26T22:26:28Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: 9748 Build-Time: 14 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 31 Job: libghemical_3.0.0-4.3 Machine Architecture: amd64 Package: libghemical Package-Time: 67 Source-Version: 3.0.0-4.3 Space: 9748 Status: attempted Version: 3.0.0-4.3 -------------------------------------------------------------------------------- Finished at 2021-10-26T22:26:28Z Build needed 00:01:07, 9748k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 68.067237327s DC-Time-Estimation: 68.067237327 versus expected 139 (r/m: 1.0420984523322696 ; m: 68.067237327)