DC-Build-Header: nifticlib 3.0.1-8 / 2021-10-26 22:42:40 +0000 DC-Task: type:rebuild-binarch-only source:nifticlib version:3.0.1-8 chroot:unstable esttime:103 logfile:/tmp/nifticlib_3.0.1-8_unstable_clang13.log modes:clang13:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --no-run-lintian --chroot-setup-commands=/tmp/clang13 nifticlib_3.0.1-8' sbuild (Debian sbuild) 0.78.1 (09 February 2019) on ip-172-31-6-254.eu-central-1.compute.internal +==============================================================================+ | nifticlib 3.0.1-8 (amd64) Tue, 26 Oct 2021 22:42:40 +0000 | +==============================================================================+ Package: nifticlib Version: 3.0.1-8 Source Version: 3.0.1-8 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-688090ad-c511-48d6-bea3-1058f4dd2f9f' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang13 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=13 + echo 'Install of clang-13' Install of clang-13 + apt-get update Get:1 http://127.0.0.1:12990/debian sid InRelease [165 kB] Get:2 http://127.0.0.1:12990/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://127.0.0.1:12990/debian sid/main Sources T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [47.3 kB] Get:4 http://127.0.0.1:12990/debian sid/main Sources T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [47.3 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 Packages T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [55.9 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 Packages T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [55.9 kB] Get:6 http://127.0.0.1:12990/debian sid/main Translation-en [6586 kB] Fetched 6981 kB in 3s (2746 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-13 libomp-13-dev libobjc-9-dev Reading package lists... Building dependency tree... The following additional packages will be installed: lib32gcc-s1 lib32stdc++6 libasan5 libbsd0 libc6-i386 libclang-common-13-dev libclang-cpp13 libclang1-13 libedit2 libgc1 libgcc-9-dev libicu67 libllvm13 libmd0 libobjc-11-dev libobjc4 libomp5-13 libxml2 libz3-4 Suggested packages: clang-13-doc libomp-13-doc Recommended packages: llvm-13-dev python3 The following NEW packages will be installed: clang-13 lib32gcc-s1 lib32stdc++6 libasan5 libbsd0 libc6-i386 libclang-common-13-dev libclang-cpp13 libclang1-13 libedit2 libgc1 libgcc-9-dev libicu67 libllvm13 libmd0 libobjc-11-dev libobjc-9-dev libobjc4 libomp-13-dev libomp5-13 libxml2 libz3-4 0 upgraded, 22 newly installed, 0 to remove and 0 not upgraded. Need to get 68.5 MB of archives. After this operation, 379 MB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 libmd0 amd64 1.0.4-1 [29.6 kB] Get:2 http://127.0.0.1:12990/debian sid/main amd64 libbsd0 amd64 0.11.3-1 [108 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libedit2 amd64 3.1-20210910-1 [97.5 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libxml2 amd64 2.9.12+dfsg-5 [696 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 libz3-4 amd64 4.8.12-1+b1 [6997 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 libllvm13 amd64 1:13.0.0-8 [19.7 MB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 libclang-cpp13 amd64 1:13.0.0-8 [10.5 MB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 libgc1 amd64 1:8.0.4-3 [239 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 libobjc4 amd64 11.2.0-10 [43.2 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 libobjc-11-dev amd64 11.2.0-10 [170 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 libc6-i386 amd64 2.32-4 [2624 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 lib32gcc-s1 amd64 11.2.0-10 [49.9 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 lib32stdc++6 amd64 11.2.0-10 [601 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 libclang-common-13-dev amd64 1:13.0.0-8 [5730 kB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 libclang1-13 amd64 1:13.0.0-8 [6093 kB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 clang-13 amd64 1:13.0.0-8 [119 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 libasan5 amd64 9.4.0-3 [2734 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libgcc-9-dev amd64 9.4.0-3 [2343 kB] Get:20 http://127.0.0.1:12990/debian sid/main amd64 libobjc-9-dev amd64 9.4.0-3 [219 kB] Get:21 http://127.0.0.1:12990/debian sid/main amd64 libomp5-13 amd64 1:13.0.0-8 [377 kB] Get:22 http://127.0.0.1:12990/debian sid/main amd64 libomp-13-dev amd64 1:13.0.0-8 [482 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 68.5 MB in 0s (145 MB/s) Selecting previously unselected package libmd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12431 files and directories currently installed.) Preparing to unpack .../00-libmd0_1.0.4-1_amd64.deb ... Unpacking libmd0:amd64 (1.0.4-1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../01-libbsd0_0.11.3-1_amd64.deb ... Unpacking libbsd0:amd64 (0.11.3-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../02-libedit2_3.1-20210910-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20210910-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../03-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../04-libxml2_2.9.12+dfsg-5_amd64.deb ... Unpacking libxml2:amd64 (2.9.12+dfsg-5) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../05-libz3-4_4.8.12-1+b1_amd64.deb ... Unpacking libz3-4:amd64 (4.8.12-1+b1) ... Selecting previously unselected package libllvm13:amd64. Preparing to unpack .../06-libllvm13_1%3a13.0.0-8_amd64.deb ... Unpacking libllvm13:amd64 (1:13.0.0-8) ... Selecting previously unselected package libclang-cpp13. Preparing to unpack .../07-libclang-cpp13_1%3a13.0.0-8_amd64.deb ... Unpacking libclang-cpp13 (1:13.0.0-8) ... Selecting previously unselected package libgc1:amd64. Preparing to unpack .../08-libgc1_1%3a8.0.4-3_amd64.deb ... Unpacking libgc1:amd64 (1:8.0.4-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../09-libobjc4_11.2.0-10_amd64.deb ... Unpacking libobjc4:amd64 (11.2.0-10) ... Selecting previously unselected package libobjc-11-dev:amd64. Preparing to unpack .../10-libobjc-11-dev_11.2.0-10_amd64.deb ... Unpacking libobjc-11-dev:amd64 (11.2.0-10) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../11-libc6-i386_2.32-4_amd64.deb ... Unpacking libc6-i386 (2.32-4) ... Selecting previously unselected package lib32gcc-s1. Preparing to unpack .../12-lib32gcc-s1_11.2.0-10_amd64.deb ... Unpacking lib32gcc-s1 (11.2.0-10) ... Selecting previously unselected package lib32stdc++6. Preparing to unpack .../13-lib32stdc++6_11.2.0-10_amd64.deb ... Unpacking lib32stdc++6 (11.2.0-10) ... Selecting previously unselected package libclang-common-13-dev. Preparing to unpack .../14-libclang-common-13-dev_1%3a13.0.0-8_amd64.deb ... Unpacking libclang-common-13-dev (1:13.0.0-8) ... Selecting previously unselected package libclang1-13. Preparing to unpack .../15-libclang1-13_1%3a13.0.0-8_amd64.deb ... Unpacking libclang1-13 (1:13.0.0-8) ... Selecting previously unselected package clang-13. Preparing to unpack .../16-clang-13_1%3a13.0.0-8_amd64.deb ... Unpacking clang-13 (1:13.0.0-8) ... Selecting previously unselected package libasan5:amd64. Preparing to unpack .../17-libasan5_9.4.0-3_amd64.deb ... Unpacking libasan5:amd64 (9.4.0-3) ... Selecting previously unselected package libgcc-9-dev:amd64. Preparing to unpack .../18-libgcc-9-dev_9.4.0-3_amd64.deb ... Unpacking libgcc-9-dev:amd64 (9.4.0-3) ... Selecting previously unselected package libobjc-9-dev:amd64. Preparing to unpack .../19-libobjc-9-dev_9.4.0-3_amd64.deb ... Unpacking libobjc-9-dev:amd64 (9.4.0-3) ... Selecting previously unselected package libomp5-13:amd64. Preparing to unpack .../20-libomp5-13_1%3a13.0.0-8_amd64.deb ... Unpacking libomp5-13:amd64 (1:13.0.0-8) ... Selecting previously unselected package libomp-13-dev. Preparing to unpack .../21-libomp-13-dev_1%3a13.0.0-8_amd64.deb ... Unpacking libomp-13-dev (1:13.0.0-8) ... Setting up libicu67:amd64 (67.1-7) ... Setting up libasan5:amd64 (9.4.0-3) ... Setting up libz3-4:amd64 (4.8.12-1+b1) ... Setting up libgc1:amd64 (1:8.0.4-3) ... Setting up libmd0:amd64 (1.0.4-1) ... Setting up libc6-i386 (2.32-4) ... Setting up libomp5-13:amd64 (1:13.0.0-8) ... Setting up libbsd0:amd64 (0.11.3-1) ... Setting up libxml2:amd64 (2.9.12+dfsg-5) ... Setting up libedit2:amd64 (3.1-20210910-1) ... Setting up libobjc4:amd64 (11.2.0-10) ... Setting up libgcc-9-dev:amd64 (9.4.0-3) ... Setting up lib32gcc-s1 (11.2.0-10) ... Setting up lib32stdc++6 (11.2.0-10) ... Setting up libllvm13:amd64 (1:13.0.0-8) ... Setting up libobjc-9-dev:amd64 (9.4.0-3) ... Setting up libclang-common-13-dev (1:13.0.0-8) ... Setting up libomp-13-dev (1:13.0.0-8) ... Setting up libobjc-11-dev:amd64 (11.2.0-10) ... Setting up libclang1-13 (1:13.0.0-8) ... Setting up libclang-cpp13 (1:13.0.0-8) ... Setting up clang-13 (1:13.0.0-8) ... Processing triggers for libc-bin (2.32-4) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8 9 10 11' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-13 g++-4.6 + ln -s clang-13 gcc-4.6 + ln -s clang-13 cpp-4.6 + ln -s clang-13 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-13 g++-4.7 + ln -s clang-13 gcc-4.7 + ln -s clang-13 cpp-4.7 + ln -s clang-13 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-13 g++-4.8 + ln -s clang-13 gcc-4.8 + ln -s clang-13 cpp-4.8 + ln -s clang-13 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-13 g++-4.9 + ln -s clang-13 gcc-4.9 + ln -s clang-13 cpp-4.9 + ln -s clang-13 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-13 g++-5 + ln -s clang-13 gcc-5 + ln -s clang-13 cpp-5 + ln -s clang-13 gcc + echo 'gcc-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-13 g++-6 + ln -s clang-13 gcc-6 + ln -s clang-13 cpp-6 + ln -s clang-13 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-13 g++-7 + ln -s clang-13 gcc-7 + ln -s clang-13 cpp-7 + ln -s clang-13 gcc + echo 'gcc-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-13 g++-8 + ln -s clang-13 gcc-8 + ln -s clang-13 cpp-8 + ln -s clang-13 gcc + echo 'gcc-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-9 gcc-9 cpp-9 gcc + ln -s clang++-13 g++-9 + ln -s clang-13 gcc-9 + ln -s clang-13 cpp-9 + ln -s clang-13 gcc + echo 'gcc-9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-10 gcc-10 cpp-10 gcc + ln -s clang++-13 g++-10 + ln -s clang-13 gcc-10 + ln -s clang-13 cpp-10 + ln -s clang-13 gcc + echo 'gcc-10 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-10 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-10 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-10 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-11 gcc-11 cpp-11 gcc + ln -s clang++-13 g++-11 + ln -s clang-13 gcc-11 + ln -s clang-13 cpp-11 + ln -s clang-13 gcc + echo 'gcc-11 hold' + dpkg --set-selections + echo 'g++-11 hold' + dpkg --set-selections + cd - /build/nifticlib-osTGwu + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang + cd /usr/bin/ + rm -f clang++ clang + ln -s clang-13 clang++ + ln -s clang-13 clang + clang++ --version Debian clang version 13.0.0-8 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + clang --version Debian clang version 13.0.0-8 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + cd - /build/nifticlib-osTGwu + apt install --yes --no-install-recommends --force-yes qt5-qmake WARNING: apt does not have a stable CLI interface. Use with caution in scripts. Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: qt5-qmake-bin qtchooser The following NEW packages will be installed: qt5-qmake qt5-qmake-bin qtchooser 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 1322 kB of archives. After this operation, 4914 kB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake-bin amd64 5.15.2+dfsg-12 [1046 kB] Get:2 http://127.0.0.1:12990/debian sid/main amd64 qtchooser amd64 66-2 [26.3 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake amd64 5.15.2+dfsg-12 [249 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1322 kB in 0s (57.8 MB/s) Selecting previously unselected package qt5-qmake-bin. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13528 files and directories currently installed.) Preparing to unpack .../qt5-qmake-bin_5.15.2+dfsg-12_amd64.deb ... Unpacking qt5-qmake-bin (5.15.2+dfsg-12) ... Selecting previously unselected package qtchooser. Preparing to unpack .../qtchooser_66-2_amd64.deb ... Unpacking qtchooser (66-2) ... Selecting previously unselected package qt5-qmake:amd64. Preparing to unpack .../qt5-qmake_5.15.2+dfsg-12_amd64.deb ... Unpacking qt5-qmake:amd64 (5.15.2+dfsg-12) ... Setting up qt5-qmake-bin (5.15.2+dfsg-12) ... Setting up qtchooser (66-2) ... Setting up qt5-qmake:amd64 (5.15.2+dfsg-12) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + cp /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qmake.conf /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qplatformdefs.h /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ + ls -al /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ total 16 drwxr-xr-x 2 root root 4096 Oct 26 22:42 . drwxr-xr-x 76 root root 4096 Oct 26 22:42 .. -rw-r--r-- 1 root root 276 Oct 26 22:43 qmake.conf -rw-r--r-- 1 root root 3218 Oct 26 22:43 qplatformdefs.h + cat /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/qmake.conf # # qmake configuration for linux-clang # MAKEFILE_GENERATOR = UNIX CONFIG += incremental QMAKE_INCREMENTAL_STYLE = sublib include(../common/linux.conf) include(../common/gcc-base-unix.conf) include(../common/clang.conf) QMAKE_LFLAGS += -ccc-gcc-name g++ load(qt_config) + export QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + sed -i -e 's|compare_problem(2,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + sed -i -e 's|compare_problem(1,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + grep 'compare_problem(' /usr/bin/dpkg-gensymbols compare_problem(4, g_('new libraries appeared in the symbols file: %s'), "@libs"); compare_problem(3, g_('some libraries disappeared in the symbols file: %s'), "@libs"); compare_problem(0, g_('some new symbols appeared in the symbols file: %s'), compare_problem(0, g_('some symbols or patterns disappeared in the symbols file: %s'), I: Finished running '/tmp/clang13'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/nifticlib-osTGwu/resolver-X2N5QA' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:12990/debian sid InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'nifticlib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/nifticlib.git Please use: git clone https://salsa.debian.org/med-team/nifticlib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 453 kB of source archives. Get:1 http://127.0.0.1:12990/debian sid/main nifticlib 3.0.1-8 (dsc) [2599 B] Get:2 http://127.0.0.1:12990/debian sid/main nifticlib 3.0.1-8 (tar) [439 kB] Get:3 http://127.0.0.1:12990/debian sid/main nifticlib 3.0.1-8 (diff) [11.8 kB] Fetched 453 kB in 0s (5435 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/nifticlib-osTGwu/nifticlib-3.0.1' with '<>' I: NOTICE: Log filtering will replace 'build/nifticlib-osTGwu' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, zlib1g-dev, doxygen, python3, graphviz, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, zlib1g-dev, doxygen, python3, graphviz, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [410 B] Get:5 copy:/<>/apt_archive ./ Packages [489 B] Fetched 1856 B in 0s (182 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-elpa-helper dh-strip-nondeterminism doxygen dwz emacsen-common file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base intltool-debian libann0 libarchive-zip-perl libarchive13 libbrotli1 libcairo2 libcdt5 libcgraph6 libclang-cpp11 libclang1-11 libcurl4 libdatrie1 libdebhelper-perl libdeflate0 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libjbig0 libjpeg62-turbo libjsoncpp24 liblab-gamut1 libldap-2.4-2 libllvm11 libltdl7 libmagic-mgc libmagic1 libmpdec3 libncurses6 libncursesw6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libprocps8 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libreadline8 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsqlite3-0 libssh2-1 libsub-override-perl libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db media-types po-debconf procps python3 python3-minimal python3.9 python3.9-minimal readline-common sensible-utils ucf x11-common zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc cmake-doc ninja-build dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff lrzip libgd-tools libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.9-venv python3.9-doc binfmt-support readline-doc Recommended packages: curl | wget | lynx fonts-liberation ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin libldap-common libgpm2 publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-elpa-helper dh-strip-nondeterminism doxygen dwz emacsen-common file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base intltool-debian libann0 libarchive-zip-perl libarchive13 libbrotli1 libcairo2 libcdt5 libcgraph6 libclang-cpp11 libclang1-11 libcurl4 libdatrie1 libdebhelper-perl libdeflate0 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libjbig0 libjpeg62-turbo libjsoncpp24 liblab-gamut1 libldap-2.4-2 libllvm11 libltdl7 libmagic-mgc libmagic1 libmpdec3 libncurses6 libncursesw6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libprocps8 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libreadline8 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsqlite3-0 libssh2-1 libsub-override-perl libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db media-types po-debconf procps python3 python3-minimal python3.9 python3.9-minimal readline-common sbuild-build-depends-main-dummy sensible-utils ucf x11-common zlib1g-dev 0 upgraded, 122 newly installed, 0 to remove and 0 not upgraded. Need to get 80.3 MB of archives. After this operation, 312 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 http://127.0.0.1:12990/debian sid/main amd64 bsdextrautils amd64 2.37.2-4 [143 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 groff-base amd64 1.22.4-7 [935 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 libpython3.9-minimal amd64 3.9.7-4 [804 kB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 libexpat1 amd64 2.4.1-3 [104 kB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 python3.9-minimal amd64 3.9.7-4 [1963 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 media-types all 4.0.0 [30.3 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 libncursesw6 amd64 6.2+20210905-1 [133 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 readline-common all 8.1-2 [73.8 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 libreadline8 amd64 8.1-2 [168 kB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 libsqlite3-0 amd64 3.36.0-2 [815 kB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 libpython3.9-stdlib amd64 3.9.7-4 [1688 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 python3.9 amd64 3.9.7-4 [480 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get:20 http://127.0.0.1:12990/debian sid/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get:21 http://127.0.0.1:12990/debian sid/main amd64 libncurses6 amd64 6.2+20210905-1 [102 kB] Get:22 http://127.0.0.1:12990/debian sid/main amd64 libprocps8 amd64 2:3.3.17-5 [63.9 kB] Get:23 http://127.0.0.1:12990/debian sid/main amd64 procps amd64 2:3.3.17-5 [502 kB] Get:24 http://127.0.0.1:12990/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:25 http://127.0.0.1:12990/debian sid/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:26 http://127.0.0.1:12990/debian sid/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:27 http://127.0.0.1:12990/debian sid/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:28 http://127.0.0.1:12990/debian sid/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:29 http://127.0.0.1:12990/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:30 http://127.0.0.1:12990/debian sid/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:31 http://127.0.0.1:12990/debian sid/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:32 http://127.0.0.1:12990/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:33 http://127.0.0.1:12990/debian sid/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:34 http://127.0.0.1:12990/debian sid/main amd64 automake all 1:1.16.5-1 [823 kB] Get:35 http://127.0.0.1:12990/debian sid/main amd64 autopoint all 0.21-4 [510 kB] Get:36 http://127.0.0.1:12990/debian sid/main amd64 libarchive13 amd64 3.4.3-2+b1 [343 kB] Get:37 http://127.0.0.1:12990/debian sid/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get:38 http://127.0.0.1:12990/debian sid/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1 [69.1 kB] Get:39 http://127.0.0.1:12990/debian sid/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1 [106 kB] Get:40 http://127.0.0.1:12990/debian sid/main amd64 libldap-2.4-2 amd64 2.4.59+dfsg-1 [232 kB] Get:41 http://127.0.0.1:12990/debian sid/main amd64 libnghttp2-14 amd64 1.43.0-1 [77.1 kB] Get:42 http://127.0.0.1:12990/debian sid/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:43 http://127.0.0.1:12990/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:44 http://127.0.0.1:12990/debian sid/main amd64 libssh2-1 amd64 1.10.0-2 [178 kB] Get:45 http://127.0.0.1:12990/debian sid/main amd64 libcurl4 amd64 7.74.0-1.3+b1 [341 kB] Get:46 http://127.0.0.1:12990/debian sid/main amd64 libjsoncpp24 amd64 1.9.4-5 [78.8 kB] Get:47 http://127.0.0.1:12990/debian sid/main amd64 librhash0 amd64 1.4.2-1 [129 kB] Get:48 http://127.0.0.1:12990/debian sid/main amd64 libuv1 amd64 1.42.0-1 [135 kB] Get:49 http://127.0.0.1:12990/debian sid/main amd64 dh-elpa-helper all 2.0.9 [11.2 kB] Get:50 http://127.0.0.1:12990/debian sid/main amd64 emacsen-common all 3.0.4 [19.3 kB] Get:51 http://127.0.0.1:12990/debian sid/main amd64 cmake-data all 3.21.3-5 [1878 kB] Get:52 http://127.0.0.1:12990/debian sid/main amd64 cmake amd64 3.21.3-5 [7907 kB] Get:53 http://127.0.0.1:12990/debian sid/main amd64 d-shlibs all 0.103 [18.2 kB] Get:54 http://127.0.0.1:12990/debian sid/main amd64 libdebhelper-perl all 13.5.2 [192 kB] Get:55 http://127.0.0.1:12990/debian sid/main amd64 libtool all 2.4.6-15 [513 kB] Get:56 http://127.0.0.1:12990/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:57 http://127.0.0.1:12990/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:58 http://127.0.0.1:12990/debian sid/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:59 http://127.0.0.1:12990/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.12.0-2 [26.3 kB] Get:60 http://127.0.0.1:12990/debian sid/main amd64 dh-strip-nondeterminism all 1.12.0-2 [15.5 kB] Get:61 http://127.0.0.1:12990/debian sid/main amd64 libelf1 amd64 0.185-2 [172 kB] Get:62 http://127.0.0.1:12990/debian sid/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:63 http://127.0.0.1:12990/debian sid/main amd64 gettext amd64 0.21-4 [1311 kB] Get:64 http://127.0.0.1:12990/debian sid/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:65 http://127.0.0.1:12990/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:66 http://127.0.0.1:12990/debian sid/main amd64 debhelper all 13.5.2 [1056 kB] Get:67 http://127.0.0.1:12990/debian sid/main amd64 libllvm11 amd64 1:11.1.0-4 [17.9 MB] Get:68 http://127.0.0.1:12990/debian sid/main amd64 libclang-cpp11 amd64 1:11.1.0-4 [9662 kB] Get:69 http://127.0.0.1:12990/debian sid/main amd64 libclang1-11 amd64 1:11.1.0-4 [5522 kB] Get:70 http://127.0.0.1:12990/debian sid/main amd64 libxapian30 amd64 1.4.18-3 [1089 kB] Get:71 http://127.0.0.1:12990/debian sid/main amd64 doxygen amd64 1.9.1-2 [4234 kB] Get:72 http://127.0.0.1:12990/debian sid/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get:73 http://127.0.0.1:12990/debian sid/main amd64 libfreetype6 amd64 2.11.0+dfsg-1 [453 kB] Get:74 http://127.0.0.1:12990/debian sid/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:75 http://127.0.0.1:12990/debian sid/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get:76 http://127.0.0.1:12990/debian sid/main amd64 libfontconfig1 amd64 2.13.1-4.2 [347 kB] Get:77 http://127.0.0.1:12990/debian sid/main amd64 fontconfig amd64 2.13.1-4.2 [417 kB] Get:78 http://127.0.0.1:12990/debian sid/main amd64 libann0 amd64 1.1.2+doc-7 [25.3 kB] Get:79 http://127.0.0.1:12990/debian sid/main amd64 libcdt5 amd64 2.42.2-5 [62.2 kB] Get:80 http://127.0.0.1:12990/debian sid/main amd64 libcgraph6 amd64 2.42.2-5 [85.5 kB] Get:81 http://127.0.0.1:12990/debian sid/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get:82 http://127.0.0.1:12990/debian sid/main amd64 libdeflate0 amd64 1.8-1 [53.1 kB] Get:83 http://127.0.0.1:12990/debian sid/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:84 http://127.0.0.1:12990/debian sid/main amd64 libwebp6 amd64 0.6.1-2.1 [258 kB] Get:85 http://127.0.0.1:12990/debian sid/main amd64 libtiff5 amd64 4.3.0-2 [294 kB] Get:86 http://127.0.0.1:12990/debian sid/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:87 http://127.0.0.1:12990/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:88 http://127.0.0.1:12990/debian sid/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get:89 http://127.0.0.1:12990/debian sid/main amd64 libx11-data all 2:1.7.2-2 [311 kB] Get:90 http://127.0.0.1:12990/debian sid/main amd64 libx11-6 amd64 2:1.7.2-2+b1 [772 kB] Get:91 http://127.0.0.1:12990/debian sid/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:92 http://127.0.0.1:12990/debian sid/main amd64 libgd3 amd64 2.3.0-2 [137 kB] Get:93 http://127.0.0.1:12990/debian sid/main amd64 libglib2.0-0 amd64 2.70.0-3 [1401 kB] Get:94 http://127.0.0.1:12990/debian sid/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-4+b1 [158 kB] Get:95 http://127.0.0.1:12990/debian sid/main amd64 libpixman-1-0 amd64 0.40.0-1 [543 kB] Get:96 http://127.0.0.1:12990/debian sid/main amd64 libxcb-render0 amd64 1.14-3 [111 kB] Get:97 http://127.0.0.1:12990/debian sid/main amd64 libxcb-shm0 amd64 1.14-3 [101 kB] Get:98 http://127.0.0.1:12990/debian sid/main amd64 libxext6 amd64 2:1.3.4-1 [53.1 kB] Get:99 http://127.0.0.1:12990/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:100 http://127.0.0.1:12990/debian sid/main amd64 libcairo2 amd64 1.16.0-5 [694 kB] Get:101 http://127.0.0.1:12990/debian sid/main amd64 libltdl7 amd64 2.4.6-15 [391 kB] Get:102 http://127.0.0.1:12990/debian sid/main amd64 libfribidi0 amd64 1.0.8-2 [64.8 kB] Get:103 http://127.0.0.1:12990/debian sid/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:104 http://127.0.0.1:12990/debian sid/main amd64 libharfbuzz0b amd64 2.7.4-1 [1471 kB] Get:105 http://127.0.0.1:12990/debian sid/main amd64 libthai-data all 0.1.28-4.1 [171 kB] Get:106 http://127.0.0.1:12990/debian sid/main amd64 libdatrie1 amd64 0.2.13-2 [43.0 kB] Get:107 http://127.0.0.1:12990/debian sid/main amd64 libthai0 amd64 0.1.28-4.1 [54.5 kB] Get:108 http://127.0.0.1:12990/debian sid/main amd64 libpango-1.0-0 amd64 1.48.10+ds1-1 [204 kB] Get:109 http://127.0.0.1:12990/debian sid/main amd64 libpangoft2-1.0-0 amd64 1.48.10+ds1-1 [73.3 kB] Get:110 http://127.0.0.1:12990/debian sid/main amd64 libpangocairo-1.0-0 amd64 1.48.10+ds1-1 [60.7 kB] Get:111 http://127.0.0.1:12990/debian sid/main amd64 libpathplan4 amd64 2.42.2-5 [64.3 kB] Get:112 http://127.0.0.1:12990/debian sid/main amd64 libgvc6 amd64 2.42.2-5 [695 kB] Get:113 http://127.0.0.1:12990/debian sid/main amd64 libgvpr2 amd64 2.42.2-5 [212 kB] Get:114 http://127.0.0.1:12990/debian sid/main amd64 liblab-gamut1 amd64 2.42.2-5 [221 kB] Get:115 http://127.0.0.1:12990/debian sid/main amd64 x11-common all 1:7.7+23 [252 kB] Get:116 http://127.0.0.1:12990/debian sid/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get:117 http://127.0.0.1:12990/debian sid/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:118 http://127.0.0.1:12990/debian sid/main amd64 libxt6 amd64 1:1.2.0-1 [189 kB] Get:119 http://127.0.0.1:12990/debian sid/main amd64 libxmu6 amd64 2:1.1.2-2+b3 [60.8 kB] Get:120 http://127.0.0.1:12990/debian sid/main amd64 libxaw7 amd64 2:1.0.13-1.1 [202 kB] Get:121 http://127.0.0.1:12990/debian sid/main amd64 graphviz amd64 2.42.2-5 [632 kB] Get:122 http://127.0.0.1:12990/debian sid/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2 [190 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 80.3 MB in 1s (146 MB/s) 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Setting up bsdextrautils (2.37.2-4) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libdatrie1:amd64 (0.2.13-2) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive13:amd64 (3.4.3-2+b1) ... Setting up libxcb-render0:amd64 (1.14-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.70.0-3) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.5.2) ... Setting up libbrotli1:amd64 (1.0.9-2+b2) ... Setting up libsqlite3-0:amd64 (3.36.0-2) ... Setting up liblab-gamut1:amd64 (2.42.2-5) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of restart. Setting up libnghttp2-14:amd64 (1.43.0-1) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up libdeflate0:amd64 (1.8-1) ... Setting up gettext-base (0.21-4) ... Setting up libxcb-shm0:amd64 (1.14-3) ... Setting up file (1:5.39-3) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1) ... Setting up libgts-0.7-5:amd64 (0.7.6+darcs121130-4+b1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libuv1:amd64 (1.42.0-1) ... Setting up libllvm11:amd64 (1:11.1.0-4) ... Setting up libjpeg62-turbo:amd64 (1:2.0.6-4) ... Setting up emacsen-common (3.0.4) ... Setting up libx11-data (2:1.7.2-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up dh-elpa-helper (2.0.9) ... Setting up libpathplan4:amd64 (2.42.2-5) ... Setting up libann0 (1.1.2+doc-7) ... Setting up libncurses6:amd64 (6.2+20210905-1) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up libfribidi0:amd64 (1.0.8-2) ... Setting up libpng16-16:amd64 (1.6.37-3) ... Setting up libclang1-11 (1:11.1.0-4) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:amd64 (0.6.1-2.1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up d-shlibs (0.103) ... Setting up libncursesw6:amd64 (6.2+20210905-1) ... Setting up libltdl7:amd64 (2.4.6-15) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2.1) ... Setting up libjsoncpp24:amd64 (1.9.4-5) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2) ... Setting up sensible-utils (0.0.17) ... Setting up librhash0:amd64 (1.4.2-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libmpdec3:amd64 (2.5.1-2) ... Setting up libsub-override-perl (0.09-2) ... Setting up libx11-6:amd64 (2:1.7.2-2+b1) ... Setting up libthai-data (0.1.28-4.1) ... Setting up libssh2-1:amd64 (1.10.0-2) ... Setting up cmake-data (3.21.3-5) ... Setting up libcdt5:amd64 (2.42.2-5) ... Setting up libcgraph6:amd64 (2.42.2-5) ... Setting up libtiff5:amd64 (4.3.0-2) ... Setting up libelf1:amd64 (0.185-2) ... Setting up readline-common (8.1-2) ... Setting up libprocps8:amd64 (2:3.3.17-5) ... Setting up libfile-stripnondeterminism-perl (1.12.0-2) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up gettext (0.21-4) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libtool (2.4.6-15) ... Setting up libreadline8:amd64 (8.1-2) ... Setting up libxext6:amd64 (2:1.3.4-1) ... Setting up libldap-2.4-2:amd64 (2.4.59+dfsg-1) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libclang-cpp11 (1:11.1.0-4) ... Setting up libthai0:amd64 (0.1.28-4.1) ... Setting up doxygen (1.9.1-2) ... Setting up libfreetype6:amd64 (2.11.0+dfsg-1) ... Setting up ucf (3.0043) ... Setting up autoconf (2.71-2) ... Setting up dh-strip-nondeterminism (1.12.0-2) ... Setting up libgvpr2:amd64 (2.42.2-5) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-7) ... Setting up procps (2:3.3.17-5) ... Setting up libcurl4:amd64 (7.74.0-1.3+b1) ... Setting up libharfbuzz0b:amd64 (2.7.4-1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libpython3.9-stdlib:amd64 (3.9.7-4) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up automake (1:1.16.5-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up libxt6:amd64 (1:1.2.0-1) ... Setting up cmake (3.21.3-5) ... Setting up libfontconfig1:amd64 (2.13.1-4.2) ... Setting up python3.9 (3.9.7-4) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libxmu6:amd64 (2:1.1.2-2+b3) ... Setting up libpango-1.0-0:amd64 (1.48.10+ds1-1) ... Setting up debhelper (13.5.2) ... Setting up python3 (3.9.2-3) ... Setting up libxaw7:amd64 (2:1.0.13-1.1) ... Setting up libcairo2:amd64 (1.16.0-5) ... Setting up libgd3:amd64 (2.3.0-2) ... Setting up libpangoft2-1.0-0:amd64 (1.48.10+ds1-1) ... Setting up libpangocairo-1.0-0:amd64 (1.48.10+ds1-1) ... Setting up libgvc6 (2.42.2-5) ... Setting up graphviz (2.42.2-5) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-cloud-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.37-7 dpkg-dev_1.20.9 g++-11_11.2.0-10 gcc-11_11.2.0-10 libc6-dev_2.32-4 libstdc++-11-dev_11.2.0-10 libstdc++6_11.2.0-10 linux-libc-dev_5.14.12-1 Package versions: adduser_3.118 apt_2.3.11 autoconf_2.71-2 automake_1:1.16.5-1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.52 bash_5.1-3+b2 binutils_2.37-7 binutils-common_2.37-7 binutils-x86-64-linux-gnu_2.37-7 bsdextrautils_2.37.2-4 bsdutils_1:2.37.2-4 build-essential_12.9 bzip2_1.0.8-4 clang-13_1:13.0.0-8 cmake_3.21.3-5 cmake-data_3.21.3-5 coreutils_8.32-4+b1 cpp_4:11.2.0-2 cpp-11_11.2.0-10 d-shlibs_0.103 dash_0.5.11+git20210120+802ebd4-2 debconf_1.5.78 debhelper_13.5.2 debian-archive-keyring_2021.1.1 debianutils_5.5-1 dh-autoreconf_20 dh-elpa-helper_2.0.9 dh-strip-nondeterminism_1.12.0-2 diffutils_1:3.7-5 doxygen_1.9.1-2 dpkg_1.20.9 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.4-1 emacsen-common_3.0.4 fakeroot_1.26-1 file_1:5.39-3 findutils_4.8.0-1 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 g++_4:11.2.0-2 g++-11_11.2.0-10 gcc_4:11.2.0-2 gcc-10-base_10.3.0-11 gcc-11_11.2.0-10 gcc-11-base_11.2.0-10 gcc-9-base_9.4.0-3 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 graphviz_2.42.2-5 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 lib32gcc-s1_11.2.0-10 lib32stdc++6_11.2.0-10 libacl1_2.3.1-1 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libffi8_3.4.2-3 libfile-stripnondeterminism-perl_1.12.0-2 libfontconfig1_2.13.1-4.2 libfreetype6_2.11.0+dfsg-1 libfribidi0_1.0.8-2 libgc1_1:8.0.4-3 libgcc-11-dev_11.2.0-10 libgcc-9-dev_9.4.0-3 libgcc-s1_11.2.0-10 libgcrypt20_1.9.4-3+b1 libgd3_2.3.0-2 libgdbm-compat4_1.22-1 libgdbm6_1.22-1 libglib2.0-0_2.70.0-3 libgmp10_2:6.2.1+dfsg-2 libgnutls30_3.7.2-2 libgomp1_11.2.0-10 libgpg-error0_1.42-3 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.18.3-7 libgts-0.7-5_0.7.6+darcs121130-4+b1 libgvc6_2.42.2-5 libgvpr2_2.42.2-5 libharfbuzz0b_2.7.4-1 libhogweed6_3.7.3-1 libice6_2:1.0.10-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.24-2 libitm1_11.2.0-10 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:2.0.6-4 libjsoncpp24_1.9.4-5 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 liblab-gamut1_2.42.2-5 libldap-2.4-2_2.4.59+dfsg-1 libllvm11_1:11.1.0-4 libllvm13_1:13.0.0-8 liblsan0_11.2.0-10 libltdl7_2.4.6-15 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 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+------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: nifticlib Binary: libnifti2-2, libnifti2-dev, libnifti-dev, libniftiio2, libniftiio-dev, libnifticdf2, libnifticdf-dev, libznz3, libznz-dev, nifti-bin, libnifti-doc Architecture: any all Version: 3.0.1-8 Maintainer: Debian Med Packaging Team Uploaders: Michael Hanke , Yaroslav Halchenko Homepage: https://github.com/NIFTI-Imaging/nifti_clib Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/nifticlib Vcs-Git: https://salsa.debian.org/med-team/nifticlib.git Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, zlib1g-dev, doxygen, python3, graphviz Package-List: libnifti-dev deb oldlibs optional arch=all libnifti-doc deb doc optional arch=all libnifti2-2 deb libs optional arch=any libnifti2-dev deb libdevel optional arch=any libnifticdf-dev deb libdevel optional arch=any libnifticdf2 deb libs optional arch=any libniftiio-dev deb libdevel optional arch=any libniftiio2 deb libs optional arch=any libznz-dev deb libdevel optional arch=any libznz3 deb libs optional arch=any nifti-bin deb science optional arch=any Checksums-Sha1: 0005c0b8dfbb2bd9e6ac0a768b36e8f35725a20e 438871 nifticlib_3.0.1.orig.tar.gz 47ea5031f6af5e9989bad63b6a9b247f72acbc92 11848 nifticlib_3.0.1-8.debian.tar.xz Checksums-Sha256: 868b611b5f8a3a73809436c9072db50db4975615905f0bd5fb7b1432e6d24b37 438871 nifticlib_3.0.1.orig.tar.gz d73d8a917be084885880d211a92b1db8da93d259c25fad5dd4204ac05d3d2664 11848 nifticlib_3.0.1-8.debian.tar.xz Files: 9fbfd9f113e941d0d983c453f6e49b35 438871 nifticlib_3.0.1.orig.tar.gz fdc4b6f4e4e29fa073d86c5bf2d28b7b 11848 nifticlib_3.0.1-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl/wll4ACgkQPCZ2P2xn 5uK8WA//VX0ddoOaYlJ6CxPrOThulvxSHOE+Zfpyoayx2gNkmwRW3Wc+P3MBMO3l GEpe5B2C5Dg/G+J1cIRNNyb8T0Eol4WS5FPCD6Z4EWpGu8YH8b5C3z4LNNwqVUrZ P1x5hjiuScOmHWqtzc55XRqL3NOWbFOHKosikl3hFb58AL00Z3mNNkoz6SRXO4hg UNkDFdWEa+dNobN8w7VDcLkmheKKBEbZuVjV3pwhULB8xy4uiLpQBR5Ea6Xnp/qQ 28esqkWPGzpWJkLnMbqi3DAKKPnTKo6eghp6Vg3acixujajhReUH6zMQFVJKWz1u WKSi07negmyWCj1KQHFOhILncRhO96z1ktQvY5FaKuVcfZoE0ow3cRw9xDKa01bH QVOw6JjuB/Oil7LD1YH5s/lOAd5eNdhwNdJFyuYZFE0A56B8cX/uVYb1YcSGpZ1I VyG8ApXNRGhnQryg4qPOplhNtTEBc+j/SZ+spyNX/D2/pqsObVYaTtriyRyrU9SS eTdB48Y4FSI+0O/O3jAeb0TEDtVlYVbJEHDCuhW6rldiGfSi+HowuhK8Z1qIWzmt ejBBIq5obE3yGT05Db/FFZXDKNGsiyoTKXHdVEPSity1/LYFqlmApiCUkB4Q0noG soj6L4uEe45upX+74/2cHsz6l3mErru++XZqm2PB0mlORDf8um0= =RPpQ -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.xDiTzlJU/trustedkeys.kbx': General error gpgv: Signature made Sat Jan 2 15:50:54 2021 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./nifticlib_3.0.1-8.dsc dpkg-source: info: extracting nifticlib in /<> dpkg-source: info: unpacking nifticlib_3.0.1.orig.tar.gz dpkg-source: info: unpacking nifticlib_3.0.1-8.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=sid-amd64-sbuild-688090ad-c511-48d6-bea3-1058f4dd2f9f SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -b -rfakeroot dpkg-buildpackage: info: source package nifticlib dpkg-buildpackage: info: source version 3.0.1-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=cmake debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -rf DEB_build_static DEB_build_shared rm -rf docs/html dh_clean make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure --builddir=DEB_build_static -- \ -DNIFTI_INSTALL_INCLUDE_DIR:PATH=include/nifti -DUSE_FSL_CODE:BOOL=OFF -DUSE_CIFTI_CODE=OFF -DNIFTI_BUILD_TESTING:BOOL=OFF \ -DBUILD_SHARED_LIBS:BOOL=OFF \ -DBUILD_TESTING:BOOL=ON cd DEB_build_static && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DNIFTI_INSTALL_INCLUDE_DIR:PATH=include/nifti -DUSE_FSL_CODE:BOOL=OFF -DUSE_CIFTI_CODE=OFF -DNIFTI_BUILD_TESTING:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=OFF -DBUILD_TESTING:BOOL=ON .. NOTEInvalid git tag does not match required regular expression, can not extract version information from '' -- The C compiler identification is Clang 13.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Setting 'NIFTI_PACKAGE_PREFIX' variable with default value '' -- Setting 'NIFTI_INSTALL_EXPORT_NAME' variable with default value 'NIFTITargets' -- Setting 'NIFTI_INSTALL_RUNTIME_DIR' variable with default value 'bin' -- Setting 'NIFTI_INSTALL_LIBRARY_DIR' variable with default value 'lib' -- Setting 'NIFTI_INSTALL_ARCHIVE_DIR' variable with default value 'lib' -- Setting 'NIFTI_INSTALL_MAN_DIR' variable with default value 'share/man/man1' -- Setting 'NIFTI_INSTALL_DOC_DIR' variable with default value 'share/doc/NIFTI' -- Setting 'NIFTI_ZLIB_LIBRARIES' variable with default value '' -- Setting 'ZNZ_COMPILE_DEF' variable with default value '' -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Setting 'NIFTI_INSTALL_NO_DOCS' variable with default value 'TRUE' -- Setting 'CMAKE_INSTALL_RPATH' variable with default value '$ORIGIN/../lib' nifti_installed_targets: znz;niftiio;nifti1_tool;nifticdf;nifti_stats;nifti2;nifti_tool -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /<>/DEB_build_static dh_auto_configure --builddir=DEB_build_shared -- \ -DNIFTI_INSTALL_INCLUDE_DIR:PATH=include/nifti -DUSE_FSL_CODE:BOOL=OFF -DUSE_CIFTI_CODE=OFF -DNIFTI_BUILD_TESTING:BOOL=OFF \ -DBUILD_SHARED_LIBS:BOOL=ON \ -DBUILD_TESTING:BOOL=OFF cd DEB_build_shared && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DNIFTI_INSTALL_INCLUDE_DIR:PATH=include/nifti -DUSE_FSL_CODE:BOOL=OFF -DUSE_CIFTI_CODE=OFF -DNIFTI_BUILD_TESTING:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF .. NOTEInvalid git tag does not match required regular expression, can not extract version information from '' -- The C compiler identification is Clang 13.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Setting 'NIFTI_PACKAGE_PREFIX' variable with default value '' -- Setting 'NIFTI_INSTALL_EXPORT_NAME' variable with default value 'NIFTITargets' -- Setting 'NIFTI_INSTALL_RUNTIME_DIR' variable with default value 'bin' -- Setting 'NIFTI_INSTALL_LIBRARY_DIR' variable with default value 'lib' -- Setting 'NIFTI_INSTALL_ARCHIVE_DIR' variable with default value 'lib' -- Setting 'NIFTI_INSTALL_MAN_DIR' variable with default value 'share/man/man1' -- Setting 'NIFTI_INSTALL_DOC_DIR' variable with default value 'share/doc/NIFTI' -- Setting 'NIFTI_ZLIB_LIBRARIES' variable with default value '' -- Setting 'ZNZ_COMPILE_DEF' variable with default value '' -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Setting 'NIFTI_INSTALL_NO_DOCS' variable with default value 'TRUE' -- Setting 'CMAKE_INSTALL_RPATH' variable with default value '$ORIGIN/../lib' nifti_installed_targets: znz;niftiio;nifti1_tool;nifticdf;nifti_stats;nifti2;nifti_tool -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /<>/DEB_build_shared make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' # build static libs cd DEB_build_static && /usr/bin/make VERBOSE=1 make[2]: Entering directory '/<>/DEB_build_static' /usr/bin/cmake -S/<> -B/<>/DEB_build_static --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/DEB_build_static/CMakeFiles /<>/DEB_build_static//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/DEB_build_static' /usr/bin/make -f znzlib/CMakeFiles/znz.dir/build.make znzlib/CMakeFiles/znz.dir/depend make[4]: Entering directory '/<>/DEB_build_static' cd /<>/DEB_build_static && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/znzlib /<>/DEB_build_static /<>/DEB_build_static/znzlib /<>/DEB_build_static/znzlib/CMakeFiles/znz.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_static' /usr/bin/make -f znzlib/CMakeFiles/znz.dir/build.make znzlib/CMakeFiles/znz.dir/build make[4]: Entering directory '/<>/DEB_build_static' [ 7%] Building C object znzlib/CMakeFiles/znz.dir/znzlib.c.o cd /<>/DEB_build_static/znzlib && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_static/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT znzlib/CMakeFiles/znz.dir/znzlib.c.o -MF CMakeFiles/znz.dir/znzlib.c.o.d -o CMakeFiles/znz.dir/znzlib.c.o -c /<>/znzlib/znzlib.c [ 14%] Linking C static library libznz.a cd /<>/DEB_build_static/znzlib && /usr/bin/cmake -P CMakeFiles/znz.dir/cmake_clean_target.cmake cd /<>/DEB_build_static/znzlib && /usr/bin/cmake -E cmake_link_script CMakeFiles/znz.dir/link.txt --verbose=1 /usr/bin/ar qc libznz.a CMakeFiles/znz.dir/znzlib.c.o /usr/bin/ranlib libznz.a make[4]: Leaving directory '/<>/DEB_build_static' [ 14%] Built target znz /usr/bin/make -f niftilib/CMakeFiles/niftiio.dir/build.make niftilib/CMakeFiles/niftiio.dir/depend make[4]: Entering directory '/<>/DEB_build_static' cd /<>/DEB_build_static && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/niftilib /<>/DEB_build_static /<>/DEB_build_static/niftilib /<>/DEB_build_static/niftilib/CMakeFiles/niftiio.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_static' /usr/bin/make -f niftilib/CMakeFiles/niftiio.dir/build.make niftilib/CMakeFiles/niftiio.dir/build make[4]: Entering directory '/<>/DEB_build_static' [ 21%] Building C object niftilib/CMakeFiles/niftiio.dir/nifti1_io.c.o cd /<>/DEB_build_static/niftilib && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_static/niftilib -I/<>/niftilib -I/<>/DEB_build_static/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT niftilib/CMakeFiles/niftiio.dir/nifti1_io.c.o -MF CMakeFiles/niftiio.dir/nifti1_io.c.o.d -o CMakeFiles/niftiio.dir/nifti1_io.c.o -c /<>/niftilib/nifti1_io.c /<>/niftilib/nifti1_io.c:471:45: warning: expansion of date or time macro is not reproducible [-Wdate-time] printf("%s, compiled %s\n", gni_version, __DATE__); ^ 1 warning generated. [ 28%] Linking C static library libniftiio.a cd /<>/DEB_build_static/niftilib && /usr/bin/cmake -P CMakeFiles/niftiio.dir/cmake_clean_target.cmake cd /<>/DEB_build_static/niftilib && /usr/bin/cmake -E cmake_link_script CMakeFiles/niftiio.dir/link.txt --verbose=1 /usr/bin/ar qc libniftiio.a CMakeFiles/niftiio.dir/nifti1_io.c.o /usr/bin/ranlib libniftiio.a make[4]: Leaving directory '/<>/DEB_build_static' [ 28%] Built target niftiio /usr/bin/make -f niftilib/CMakeFiles/nifti1_tool.dir/build.make niftilib/CMakeFiles/nifti1_tool.dir/depend make[4]: Entering directory '/<>/DEB_build_static' cd /<>/DEB_build_static && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/niftilib /<>/DEB_build_static /<>/DEB_build_static/niftilib /<>/DEB_build_static/niftilib/CMakeFiles/nifti1_tool.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_static' /usr/bin/make -f niftilib/CMakeFiles/nifti1_tool.dir/build.make niftilib/CMakeFiles/nifti1_tool.dir/build make[4]: Entering directory '/<>/DEB_build_static' [ 35%] Building C object niftilib/CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o cd /<>/DEB_build_static/niftilib && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_static/niftilib -I/<>/niftilib -I/<>/DEB_build_static/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT niftilib/CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o -MF CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o.d -o CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o -c /<>/niftilib/nifti1_tool.c /<>/niftilib/nifti1_tool.c:1732:4: warning: expansion of date or time macro is not reproducible [-Wdate-time] __DATE__, g_version ); ^ 1 warning generated. [ 42%] Linking C executable nifti1_tool cd /<>/DEB_build_static/niftilib && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifti1_tool.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o -o nifti1_tool -Wl,-rpath,:::::::::::::: libniftiio.a ../znzlib/libznz.a /usr/lib/x86_64-linux-gnu/libz.so -lm make[4]: Leaving directory '/<>/DEB_build_static' [ 42%] Built target nifti1_tool /usr/bin/make -f nifticdf/CMakeFiles/nifticdf.dir/build.make nifticdf/CMakeFiles/nifticdf.dir/depend make[4]: Entering directory '/<>/DEB_build_static' cd /<>/DEB_build_static && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/nifticdf /<>/DEB_build_static /<>/DEB_build_static/nifticdf /<>/DEB_build_static/nifticdf/CMakeFiles/nifticdf.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_static' /usr/bin/make -f nifticdf/CMakeFiles/nifticdf.dir/build.make nifticdf/CMakeFiles/nifticdf.dir/build make[4]: Entering directory '/<>/DEB_build_static' [ 50%] Building C object nifticdf/CMakeFiles/nifticdf.dir/nifticdf.c.o cd /<>/DEB_build_static/nifticdf && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_static/nifticdf -I/<>/nifticdf -I/<>/DEB_build_static/niftilib -I/<>/niftilib -I/<>/DEB_build_static/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D__COMPILE_UNUSED_FUNCTIONS__ -MD -MT nifticdf/CMakeFiles/nifticdf.dir/nifticdf.c.o -MF CMakeFiles/nifticdf.dir/nifticdf.c.o.d -o CMakeFiles/nifticdf.dir/nifticdf.c.o -c /<>/nifticdf/nifticdf.c [ 57%] Linking C static library libnifticdf.a cd /<>/DEB_build_static/nifticdf && /usr/bin/cmake -P CMakeFiles/nifticdf.dir/cmake_clean_target.cmake cd /<>/DEB_build_static/nifticdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifticdf.dir/link.txt --verbose=1 /usr/bin/ar qc libnifticdf.a CMakeFiles/nifticdf.dir/nifticdf.c.o /usr/bin/ranlib libnifticdf.a make[4]: Leaving directory '/<>/DEB_build_static' [ 57%] Built target nifticdf /usr/bin/make -f nifticdf/CMakeFiles/nifti_stats.dir/build.make nifticdf/CMakeFiles/nifti_stats.dir/depend make[4]: Entering directory '/<>/DEB_build_static' cd /<>/DEB_build_static && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/nifticdf /<>/DEB_build_static /<>/DEB_build_static/nifticdf /<>/DEB_build_static/nifticdf/CMakeFiles/nifti_stats.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_static' /usr/bin/make -f nifticdf/CMakeFiles/nifti_stats.dir/build.make nifticdf/CMakeFiles/nifti_stats.dir/build make[4]: Entering directory '/<>/DEB_build_static' [ 64%] Building C object nifticdf/CMakeFiles/nifti_stats.dir/nifti_stats.c.o cd /<>/DEB_build_static/nifticdf && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_static/nifticdf -I/<>/nifticdf -I/<>/DEB_build_static/niftilib -I/<>/niftilib -I/<>/DEB_build_static/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT nifticdf/CMakeFiles/nifti_stats.dir/nifti_stats.c.o -MF CMakeFiles/nifti_stats.dir/nifti_stats.c.o.d -o CMakeFiles/nifti_stats.dir/nifti_stats.c.o -c /<>/nifticdf/nifti_stats.c [ 71%] Linking C executable nifti_stats cd /<>/DEB_build_static/nifticdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifti_stats.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/nifti_stats.dir/nifti_stats.c.o -o nifti_stats -Wl,-rpath,:::::::::::::: ../niftilib/libniftiio.a libnifticdf.a ../niftilib/libniftiio.a ../znzlib/libznz.a /usr/lib/x86_64-linux-gnu/libz.so -lm make[4]: Leaving directory '/<>/DEB_build_static' [ 71%] Built target nifti_stats /usr/bin/make -f nifti2/CMakeFiles/nifti2.dir/build.make nifti2/CMakeFiles/nifti2.dir/depend make[4]: Entering directory '/<>/DEB_build_static' cd /<>/DEB_build_static && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/nifti2 /<>/DEB_build_static /<>/DEB_build_static/nifti2 /<>/DEB_build_static/nifti2/CMakeFiles/nifti2.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_static' /usr/bin/make -f nifti2/CMakeFiles/nifti2.dir/build.make nifti2/CMakeFiles/nifti2.dir/build make[4]: Entering directory '/<>/DEB_build_static' [ 78%] Building C object nifti2/CMakeFiles/nifti2.dir/nifti2_io.c.o cd /<>/DEB_build_static/nifti2 && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_static/nifti2 -I/<>/nifti2 -I/<>/DEB_build_static/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT nifti2/CMakeFiles/nifti2.dir/nifti2_io.c.o -MF CMakeFiles/nifti2.dir/nifti2_io.c.o.d -o CMakeFiles/nifti2.dir/nifti2_io.c.o -c /<>/nifti2/nifti2_io.c /<>/nifti2/nifti2_io.c:560:45: warning: expansion of date or time macro is not reproducible [-Wdate-time] printf("%s, compiled %s\n", gni_version, __DATE__); ^ 1 warning generated. [ 85%] Linking C static library libnifti2.a cd /<>/DEB_build_static/nifti2 && /usr/bin/cmake -P CMakeFiles/nifti2.dir/cmake_clean_target.cmake cd /<>/DEB_build_static/nifti2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifti2.dir/link.txt --verbose=1 /usr/bin/ar qc libnifti2.a CMakeFiles/nifti2.dir/nifti2_io.c.o /usr/bin/ranlib libnifti2.a make[4]: Leaving directory '/<>/DEB_build_static' [ 85%] Built target nifti2 /usr/bin/make -f nifti2/CMakeFiles/nifti_tool.dir/build.make nifti2/CMakeFiles/nifti_tool.dir/depend make[4]: Entering directory '/<>/DEB_build_static' cd /<>/DEB_build_static && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/nifti2 /<>/DEB_build_static /<>/DEB_build_static/nifti2 /<>/DEB_build_static/nifti2/CMakeFiles/nifti_tool.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_static' /usr/bin/make -f nifti2/CMakeFiles/nifti_tool.dir/build.make nifti2/CMakeFiles/nifti_tool.dir/build make[4]: Entering directory '/<>/DEB_build_static' [ 92%] Building C object nifti2/CMakeFiles/nifti_tool.dir/nifti_tool.c.o cd /<>/DEB_build_static/nifti2 && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_static/nifti2 -I/<>/nifti2 -I/<>/DEB_build_static/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT nifti2/CMakeFiles/nifti_tool.dir/nifti_tool.c.o -MF CMakeFiles/nifti_tool.dir/nifti_tool.c.o.d -o CMakeFiles/nifti_tool.dir/nifti_tool.c.o -c /<>/nifti2/nifti_tool.c /<>/nifti2/nifti_tool.c:2006:4: warning: expansion of date or time macro is not reproducible [-Wdate-time] __DATE__, g_version, g_version_date ); ^ 1 warning generated. [100%] Linking C executable nifti_tool cd /<>/DEB_build_static/nifti2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifti_tool.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/nifti_tool.dir/nifti_tool.c.o -o nifti_tool -Wl,-rpath,:::::::::::::: libnifti2.a ../znzlib/libznz.a /usr/lib/x86_64-linux-gnu/libz.so -lm make[4]: Leaving directory '/<>/DEB_build_static' [100%] Built target nifti_tool make[3]: Leaving directory '/<>/DEB_build_static' /usr/bin/cmake -E cmake_progress_start /<>/DEB_build_static/CMakeFiles 0 make[2]: Leaving directory '/<>/DEB_build_static' # build shared libs and binaries cd DEB_build_shared && /usr/bin/make VERBOSE=1 make[2]: Entering directory '/<>/DEB_build_shared' /usr/bin/cmake -S/<> -B/<>/DEB_build_shared --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/DEB_build_shared/CMakeFiles /<>/DEB_build_shared//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/DEB_build_shared' /usr/bin/make -f znzlib/CMakeFiles/znz.dir/build.make znzlib/CMakeFiles/znz.dir/depend make[4]: Entering directory '/<>/DEB_build_shared' cd /<>/DEB_build_shared && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/znzlib /<>/DEB_build_shared /<>/DEB_build_shared/znzlib /<>/DEB_build_shared/znzlib/CMakeFiles/znz.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_shared' /usr/bin/make -f znzlib/CMakeFiles/znz.dir/build.make znzlib/CMakeFiles/znz.dir/build make[4]: Entering directory '/<>/DEB_build_shared' [ 7%] Building C object znzlib/CMakeFiles/znz.dir/znzlib.c.o cd /<>/DEB_build_shared/znzlib && /usr/bin/cc -DHAVE_ZLIB -Dznz_EXPORTS -I/<>/DEB_build_shared/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT znzlib/CMakeFiles/znz.dir/znzlib.c.o -MF CMakeFiles/znz.dir/znzlib.c.o.d -o CMakeFiles/znz.dir/znzlib.c.o -c /<>/znzlib/znzlib.c [ 14%] Linking C shared library libznz.so cd /<>/DEB_build_shared/znzlib && /usr/bin/cmake -E cmake_link_script CMakeFiles/znz.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libznz.so.3 -o libznz.so.3.0.0 CMakeFiles/znz.dir/znzlib.c.o -Wl,-rpath,:::::::::::::: /usr/lib/x86_64-linux-gnu/libz.so cd /<>/DEB_build_shared/znzlib && /usr/bin/cmake -E cmake_symlink_library libznz.so.3.0.0 libznz.so.3 libznz.so make[4]: Leaving directory '/<>/DEB_build_shared' [ 14%] Built target znz /usr/bin/make -f niftilib/CMakeFiles/niftiio.dir/build.make niftilib/CMakeFiles/niftiio.dir/depend make[4]: Entering directory '/<>/DEB_build_shared' cd /<>/DEB_build_shared && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/niftilib /<>/DEB_build_shared /<>/DEB_build_shared/niftilib /<>/DEB_build_shared/niftilib/CMakeFiles/niftiio.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_shared' /usr/bin/make -f niftilib/CMakeFiles/niftiio.dir/build.make niftilib/CMakeFiles/niftiio.dir/build make[4]: Entering directory '/<>/DEB_build_shared' [ 21%] Building C object niftilib/CMakeFiles/niftiio.dir/nifti1_io.c.o cd /<>/DEB_build_shared/niftilib && /usr/bin/cc -DHAVE_ZLIB -Dniftiio_EXPORTS -I/<>/DEB_build_shared/niftilib -I/<>/niftilib -I/<>/DEB_build_shared/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT niftilib/CMakeFiles/niftiio.dir/nifti1_io.c.o -MF CMakeFiles/niftiio.dir/nifti1_io.c.o.d -o CMakeFiles/niftiio.dir/nifti1_io.c.o -c /<>/niftilib/nifti1_io.c /<>/niftilib/nifti1_io.c:471:45: warning: expansion of date or time macro is not reproducible [-Wdate-time] printf("%s, compiled %s\n", gni_version, __DATE__); ^ 1 warning generated. [ 28%] Linking C shared library libniftiio.so cd /<>/DEB_build_shared/niftilib && /usr/bin/cmake -E cmake_link_script CMakeFiles/niftiio.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libniftiio.so.2 -o libniftiio.so.2.1.0 CMakeFiles/niftiio.dir/nifti1_io.c.o -Wl,-rpath,/<>/DEB_build_shared/znzlib: ../znzlib/libznz.so.3.0.0 -lm /usr/lib/x86_64-linux-gnu/libz.so cd /<>/DEB_build_shared/niftilib && /usr/bin/cmake -E cmake_symlink_library libniftiio.so.2.1.0 libniftiio.so.2 libniftiio.so make[4]: Leaving directory '/<>/DEB_build_shared' [ 28%] Built target niftiio /usr/bin/make -f niftilib/CMakeFiles/nifti1_tool.dir/build.make niftilib/CMakeFiles/nifti1_tool.dir/depend make[4]: Entering directory '/<>/DEB_build_shared' cd /<>/DEB_build_shared && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/niftilib /<>/DEB_build_shared /<>/DEB_build_shared/niftilib /<>/DEB_build_shared/niftilib/CMakeFiles/nifti1_tool.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_shared' /usr/bin/make -f niftilib/CMakeFiles/nifti1_tool.dir/build.make niftilib/CMakeFiles/nifti1_tool.dir/build make[4]: Entering directory '/<>/DEB_build_shared' [ 35%] Building C object niftilib/CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o cd /<>/DEB_build_shared/niftilib && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_shared/niftilib -I/<>/niftilib -I/<>/DEB_build_shared/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT niftilib/CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o -MF CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o.d -o CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o -c /<>/niftilib/nifti1_tool.c /<>/niftilib/nifti1_tool.c:1732:4: warning: expansion of date or time macro is not reproducible [-Wdate-time] __DATE__, g_version ); ^ 1 warning generated. [ 42%] Linking C executable nifti1_tool cd /<>/DEB_build_shared/niftilib && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifti1_tool.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/nifti1_tool.dir/nifti1_tool.c.o -o nifti1_tool -Wl,-rpath,/<>/DEB_build_shared/niftilib:/<>/DEB_build_shared/znzlib: libniftiio.so.2.1.0 ../znzlib/libznz.so.3.0.0 /usr/lib/x86_64-linux-gnu/libz.so -lm make[4]: Leaving directory '/<>/DEB_build_shared' [ 42%] Built target nifti1_tool /usr/bin/make -f nifticdf/CMakeFiles/nifticdf.dir/build.make nifticdf/CMakeFiles/nifticdf.dir/depend make[4]: Entering directory '/<>/DEB_build_shared' cd /<>/DEB_build_shared && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/nifticdf /<>/DEB_build_shared /<>/DEB_build_shared/nifticdf /<>/DEB_build_shared/nifticdf/CMakeFiles/nifticdf.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_shared' /usr/bin/make -f nifticdf/CMakeFiles/nifticdf.dir/build.make nifticdf/CMakeFiles/nifticdf.dir/build make[4]: Entering directory '/<>/DEB_build_shared' [ 50%] Building C object nifticdf/CMakeFiles/nifticdf.dir/nifticdf.c.o cd /<>/DEB_build_shared/nifticdf && /usr/bin/cc -DHAVE_ZLIB -Dnifticdf_EXPORTS -I/<>/DEB_build_shared/nifticdf -I/<>/nifticdf -I/<>/DEB_build_shared/niftilib -I/<>/niftilib -I/<>/DEB_build_shared/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D__COMPILE_UNUSED_FUNCTIONS__ -MD -MT nifticdf/CMakeFiles/nifticdf.dir/nifticdf.c.o -MF CMakeFiles/nifticdf.dir/nifticdf.c.o.d -o CMakeFiles/nifticdf.dir/nifticdf.c.o -c /<>/nifticdf/nifticdf.c [ 57%] Linking C shared library libnifticdf.so cd /<>/DEB_build_shared/nifticdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifticdf.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libnifticdf.so.2 -o libnifticdf.so.2.1.0 CMakeFiles/nifticdf.dir/nifticdf.c.o -Wl,-rpath,/<>/DEB_build_shared/niftilib:/<>/DEB_build_shared/znzlib: ../niftilib/libniftiio.so.2.1.0 ../znzlib/libznz.so.3.0.0 /usr/lib/x86_64-linux-gnu/libz.so -lm cd /<>/DEB_build_shared/nifticdf && /usr/bin/cmake -E cmake_symlink_library libnifticdf.so.2.1.0 libnifticdf.so.2 libnifticdf.so make[4]: Leaving directory '/<>/DEB_build_shared' [ 57%] Built target nifticdf /usr/bin/make -f nifticdf/CMakeFiles/nifti_stats.dir/build.make nifticdf/CMakeFiles/nifti_stats.dir/depend make[4]: Entering directory '/<>/DEB_build_shared' cd /<>/DEB_build_shared && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/nifticdf /<>/DEB_build_shared /<>/DEB_build_shared/nifticdf /<>/DEB_build_shared/nifticdf/CMakeFiles/nifti_stats.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_shared' /usr/bin/make -f nifticdf/CMakeFiles/nifti_stats.dir/build.make nifticdf/CMakeFiles/nifti_stats.dir/build make[4]: Entering directory '/<>/DEB_build_shared' [ 64%] Building C object nifticdf/CMakeFiles/nifti_stats.dir/nifti_stats.c.o cd /<>/DEB_build_shared/nifticdf && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_shared/nifticdf -I/<>/nifticdf -I/<>/DEB_build_shared/niftilib -I/<>/niftilib -I/<>/DEB_build_shared/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT nifticdf/CMakeFiles/nifti_stats.dir/nifti_stats.c.o -MF CMakeFiles/nifti_stats.dir/nifti_stats.c.o.d -o CMakeFiles/nifti_stats.dir/nifti_stats.c.o -c /<>/nifticdf/nifti_stats.c [ 71%] Linking C executable nifti_stats cd /<>/DEB_build_shared/nifticdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifti_stats.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/nifti_stats.dir/nifti_stats.c.o -o nifti_stats -Wl,-rpath,/<>/DEB_build_shared/nifticdf:/<>/DEB_build_shared/niftilib:/<>/DEB_build_shared/znzlib: libnifticdf.so.2.1.0 ../niftilib/libniftiio.so.2.1.0 ../znzlib/libznz.so.3.0.0 /usr/lib/x86_64-linux-gnu/libz.so -lm make[4]: Leaving directory '/<>/DEB_build_shared' [ 71%] Built target nifti_stats /usr/bin/make -f nifti2/CMakeFiles/nifti2.dir/build.make nifti2/CMakeFiles/nifti2.dir/depend make[4]: Entering directory '/<>/DEB_build_shared' cd /<>/DEB_build_shared && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/nifti2 /<>/DEB_build_shared /<>/DEB_build_shared/nifti2 /<>/DEB_build_shared/nifti2/CMakeFiles/nifti2.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_shared' /usr/bin/make -f nifti2/CMakeFiles/nifti2.dir/build.make nifti2/CMakeFiles/nifti2.dir/build make[4]: Entering directory '/<>/DEB_build_shared' [ 78%] Building C object nifti2/CMakeFiles/nifti2.dir/nifti2_io.c.o cd /<>/DEB_build_shared/nifti2 && /usr/bin/cc -DHAVE_ZLIB -Dnifti2_EXPORTS -I/<>/DEB_build_shared/nifti2 -I/<>/nifti2 -I/<>/DEB_build_shared/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT nifti2/CMakeFiles/nifti2.dir/nifti2_io.c.o -MF CMakeFiles/nifti2.dir/nifti2_io.c.o.d -o CMakeFiles/nifti2.dir/nifti2_io.c.o -c /<>/nifti2/nifti2_io.c /<>/nifti2/nifti2_io.c:560:45: warning: expansion of date or time macro is not reproducible [-Wdate-time] printf("%s, compiled %s\n", gni_version, __DATE__); ^ 1 warning generated. [ 85%] Linking C shared library libnifti2.so cd /<>/DEB_build_shared/nifti2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifti2.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libnifti2.so.2 -o libnifti2.so.2.1.0 CMakeFiles/nifti2.dir/nifti2_io.c.o -Wl,-rpath,/<>/DEB_build_shared/znzlib: ../znzlib/libznz.so.3.0.0 -lm /usr/lib/x86_64-linux-gnu/libz.so cd /<>/DEB_build_shared/nifti2 && /usr/bin/cmake -E cmake_symlink_library libnifti2.so.2.1.0 libnifti2.so.2 libnifti2.so make[4]: Leaving directory '/<>/DEB_build_shared' [ 85%] Built target nifti2 /usr/bin/make -f nifti2/CMakeFiles/nifti_tool.dir/build.make nifti2/CMakeFiles/nifti_tool.dir/depend make[4]: Entering directory '/<>/DEB_build_shared' cd /<>/DEB_build_shared && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/nifti2 /<>/DEB_build_shared /<>/DEB_build_shared/nifti2 /<>/DEB_build_shared/nifti2/CMakeFiles/nifti_tool.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/DEB_build_shared' /usr/bin/make -f nifti2/CMakeFiles/nifti_tool.dir/build.make nifti2/CMakeFiles/nifti_tool.dir/build make[4]: Entering directory '/<>/DEB_build_shared' [ 92%] Building C object nifti2/CMakeFiles/nifti_tool.dir/nifti_tool.c.o cd /<>/DEB_build_shared/nifti2 && /usr/bin/cc -DHAVE_ZLIB -I/<>/DEB_build_shared/nifti2 -I/<>/nifti2 -I/<>/DEB_build_shared/znzlib -I/<>/znzlib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT nifti2/CMakeFiles/nifti_tool.dir/nifti_tool.c.o -MF CMakeFiles/nifti_tool.dir/nifti_tool.c.o.d -o CMakeFiles/nifti_tool.dir/nifti_tool.c.o -c /<>/nifti2/nifti_tool.c /<>/nifti2/nifti_tool.c:2006:4: warning: expansion of date or time macro is not reproducible [-Wdate-time] __DATE__, g_version, g_version_date ); ^ 1 warning generated. [100%] Linking C executable nifti_tool cd /<>/DEB_build_shared/nifti2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifti_tool.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/nifti_tool.dir/nifti_tool.c.o -o nifti_tool -Wl,-rpath,/<>/DEB_build_shared/nifti2:/<>/DEB_build_shared/znzlib: libnifti2.so.2.1.0 ../znzlib/libznz.so.3.0.0 /usr/lib/x86_64-linux-gnu/libz.so -lm make[4]: Leaving directory '/<>/DEB_build_shared' [100%] Built target nifti_tool make[3]: Leaving directory '/<>/DEB_build_shared' /usr/bin/cmake -E cmake_progress_start /<>/DEB_build_shared/CMakeFiles 0 make[2]: Leaving directory '/<>/DEB_build_shared' # build api reference cd docs && doxygen Doxy_nifti.txt /<>/fsliolib/fslio.h:100: warning: missing title after \defgroup FSL_TYPE /<>/fsliolib/fslio.h:271: warning: end of file while inside a group /<>/niftilib/nifti1.h:483: warning: missing title after \defgroup NIFTI1_DATATYPES /<>/niftilib/nifti1.h:524: warning: missing title after \defgroup NIFTI1_DATATYPE_ALIASES /<>/niftilib/nifti1.h:688: warning: missing title after \defgroup NIFTI1_INTENT_CODES /<>/niftilib/nifti1.h:1240: warning: missing title after \defgroup NIFTI1_XFORM_CODES /<>/niftilib/nifti1.h:1311: warning: missing title after \defgroup NIFTI1_UNITS /<>/niftilib/nifti1.h:1452: warning: missing title after \defgroup NIFTI1_SLICE_ORDER /<>/niftilib/nifti1.h:1529: warning: end of file while inside a group /<>/niftilib/nifti1_tool.c:2: warning: the name 'nifti_tool.c' supplied as the argument in the \file statement is not an input file /<>/fsliolib/dbh.h:96: warning: Compound COMPLEX is not documented. /<>/fsliolib/dbh.h:55: warning: Compound data_history is not documented. /<>/fsliolib/dbh.h:75: warning: Compound dsr is not documented. /<>/niftilib/nifti1_tool.h:80: warning: Compound field_s is not documented. /<>/fsliolib/dbh.h:16: warning: Compound header_key is not documented. /<>/fsliolib/dbh.h:27: warning: Compound image_dimension is not documented. /<>/niftilib/nifti1_tool.h:11: warning: Compound int_list is not documented. /<>/niftilib/nifti1_io.h:62: warning: Compound mat33 is not documented. /<>/niftilib/nifti1_io.h:58: warning: Compound mat44 is not documented. /<>/niftilib/nifti1_io.h:187: warning: Compound nifti_analyze75 is not documented. /<>/niftilib/nifti1_io.h:175: warning: Compound nifti_brick_list is not documented. /<>/niftilib/nifti1_io.h:491: warning: Compound nifti_global_options is not documented. /<>/niftilib/nifti1_io.h:497: warning: Compound nifti_type_ele is not documented. /<>/niftilib/nifti1_tool.h:16: warning: Compound nt_opts is not documented. /<>/niftilib/nifti1_tool.h:6: warning: Compound str_list is not documented. /<>/znzlib/znzlib.h:79: warning: Compound znzptr is not documented. /<>/niftilib/nifti1_io.h:68: warning: Documentation for undefined enum 'analyze_75_orient_code' found. Doxygen version used: 1.9.1 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /<>/fsliolib Searching for files in directory /<>/niftilib Searching for files in directory /<>/znzlib Reading and parsing tag files Parsing files Preprocessing /<>/fsliolib/dbh.h... Parsing file /<>/fsliolib/dbh.h... Preprocessing /<>/fsliolib/fslio.c... Parsing file /<>/fsliolib/fslio.c... Preprocessing /<>/fsliolib/fslio.h... Parsing file /<>/fsliolib/fslio.h... Preprocessing /<>/niftilib/nifti1.h... Parsing file /<>/niftilib/nifti1.h... Preprocessing /<>/niftilib/nifti1_io.c... Parsing file /<>/niftilib/nifti1_io.c... Preprocessing /<>/niftilib/nifti1_io.h... Parsing file /<>/niftilib/nifti1_io.h... Preprocessing /<>/niftilib/nifti1_io_version.h... Parsing file /<>/niftilib/nifti1_io_version.h... Preprocessing /<>/niftilib/nifti1_test.c... Parsing file /<>/niftilib/nifti1_test.c... Preprocessing /<>/niftilib/nifti1_tool.c... Parsing file /<>/niftilib/nifti1_tool.c... Preprocessing /<>/niftilib/nifti1_tool.h... Parsing file /<>/niftilib/nifti1_tool.h... Preprocessing /<>/niftilib/nifti_tester001.c... Parsing file /<>/niftilib/nifti_tester001.c... Preprocessing /<>/niftilib/nifti_tester002.c... Parsing file /<>/niftilib/nifti_tester002.c... Preprocessing /<>/znzlib/znzlib.c... Parsing file /<>/znzlib/znzlib.c... Preprocessing /<>/znzlib/znzlib.h... Parsing file /<>/znzlib/znzlib.h... Preprocessing /<>/znzlib/znzlib_version.h... Parsing file /<>/znzlib/znzlib_version.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Computing nesting relations for classes... Associating documentation with classes... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generati/<>/fsliolib/fslio.c:2107: warning: explicit link request to 'vol' could not be resolved /<>/fsliolib/fslio.c:2107: warning: explicit link request to 'vol' could not be resolved /<>/fsliolib/fslio.c:34: warning: Member FSLIOERR(x) (macro definition) of file fslio.c is not documented. /<>/fsliolib/fslio.c:59: warning: Member FslIsValidFileType(int filetype) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:72: warning: Member FslBaseFileType(int filetype) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:88: warning: Member FslGetFileType2(const FSLIO *fslio, int quiet) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:111: warning: Member FslGetFileType(const FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:118: warning: Member FslSetFileType(FSLIO *fslio, int filetype) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:135: warning: Member FslIsSingleFileType(int filetype) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:144: warning: Member FslIsCompressedFileType(int filetype) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:151: warning: Member FslGetWriteMode(const FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:158: warning: Member FslSetWriteMode(FSLIO *fslio, int mode) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:165: warning: Member FslGetEnvOutputType(void) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:193: warning: Member FslFileType(const char *fname) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:275: warning: Member FslFileExists(const char *filename) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:289: warning: Member FslMakeBaseName(const char *fname) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:305: warning: Member FslGetHdrImgNames(const char *filename, const FSLIO *fslio, char **hdrname, char **imgname) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:380: warning: Member FslSetInit(FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:392: warning: Member FslInit4Write(FSLIO *fslio, const char *filename, int ft) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:435: warning: Member FslInitHeader(FSLIO *fslio, short t, size_t x, size_t y, size_t z, size_t v, float vx, float vy, float vz, float tr, size_t dim) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:458: warning: Member FslCloneHeader(FSLIO *dest, const FSLIO *src) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:505: warning: Member fsl_fileexists(const char *fname) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:514: warning: Member FslCheckForMultipleFileNames(const char *filename) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:562: warning: Member check_for_multiple_filenames(const char *filename) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:1158: warning: Member FslSeekVolume(FSLIO *fslio, size_t vols) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1175: warning: Member FslGetVolSize(FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1189: warning: Member FslSetDim(FSLIO *fslio, short x, short y, short z, short v) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1228: warning: Member FslGetDim(FSLIO *fslio, short *x, short *y, short *z, short *v) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1243: warning: Member FslSetDimensionality(FSLIO *fslio, size_t dim) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1256: warning: Member FslGetDimensionality(FSLIO *fslio, size_t *dim) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1268: warning: Member FslSetVoxDim(FSLIO *fslio, float x, float y, float z, float tr) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1290: warning: Member FslGetVoxDim(FSLIO *fslio, float *x, float *y, float *z, float *tr) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1315: warning: Member FslGetCalMinMax(FSLIO *fslio, float *min, float *max) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1328: warning: Member FslSetCalMinMax(FSLIO *fslio, float min, float max) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1341: warning: Member FslGetAuxFile(FSLIO *fslio, char *aux_file) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1354: warning: Member FslSetAuxFile(FSLIO *fslio, const char *aux_file) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1366: warning: Member FslSetVoxUnits(FSLIO *fslio, const char *units) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:1386: warning: Member FslGetVoxUnits(FSLIO *fslio, char *units) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:1397: warning: Member FslSetTimeUnits(FSLIO *fslio, const char *units) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1425: warning: Member FslGetTimeUnits(FSLIO *fslio, char *units) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1437: warning: Member FslSetDataType(FSLIO *fslio, short t) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1451: warning: Member FslGetDataType(FSLIO *fslio, short *t) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1467: warning: Member FslGetMMCoord(mat44 stdmat, float voxx, float voxy, float voxz, float *mmx, float *mmy, float *mmz) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1479: warning: Member FslGetVoxCoord(mat44 stdmat, float mmx, float mmy, float mmz, float *voxx, float *voxy, float *voxz) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1494: warning: Member FslSetStdXform(FSLIO *fslio, short sform_code, mat44 stdmat) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1524: warning: Member FslGetStdXform(FSLIO *fslio, mat44 *stdmat) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1576: warning: Member FslSetRigidXform(FSLIO *fslio, short qform_code, mat44 rigidmat) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1613: warning: Member FslGetRigidXform(FSLIO *fslio, mat44 *rigidmat) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1664: warning: Member FslSetIntent(FSLIO *fslio, short intent_code, float p1, float p2, float p3) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1679: warning: Member FslGetIntent(FSLIO *fslio, short *intent_code, float *p1, float *p2, float *p3) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1700: warning: Member FslSetIntensityScaling(FSLIO *fslio, float slope, float intercept) (function) of file fslio.c is not documented. /<>/fsliolib/fslio.c:1713: warning: Member FslGetIntensityScaling(FSLIO *fslio, float *slope, float *intercept) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1739: warning: Member mat44_to_mat33(mat44 x) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1752: warning: Member FslGetLeftRightOrder(FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1782: warning: Member FslSetAnalyzeSform(FSLIO *fslio, const short *orig, float dx, float dy, float dz) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1864: warning: Member FslGetAnalyzeOrigin(FSLIO *fslio, short orig[5]) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:1993: warning: Member AvwSwapHeader(struct dsr *avw) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:2020: warning: Member FslReadRawHeader(void *buffer, const char *filename) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:2038: warning: Member FslSetOverrideOutputType(int type) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:2047: warning: Member FslGetOverrideOutputType(void) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:2052: warning: Member FslSetIgnoreMFQ(int flag) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:2059: warning: Member FslGetIgnoreMFQ(void) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:2107: warning: explicit link request to 'vol' could not be resolved /<>/fsliolib/fslio.h:104: warning: Member FSL_TYPE_ANALYZE (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:105: warning: Member FSL_TYPE_NIFTI (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:106: warning: Member FSL_TYPE_NIFTI_PAIR (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:107: warning: Member FSL_TYPE_MINC (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:108: warning: Member FSL_TYPE_ANALYZE_GZ (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:109: warning: Member FSL_TYPE_NIFTI_GZ (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:110: warning: Member FSL_TYPE_NIFTI_PAIR_GZ (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:111: warning: Member FSL_TYPE_MINC_GZ (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:114: warning: Member FSL_RADIOLOGICAL (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:115: warning: Member FSL_NEUROLOGICAL (macro definition) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:247: warning: Member THIS_UINT8 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:248: warning: Member THIS_INT8 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:249: warning: Member THIS_UINT16 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:250: warning: Member THIS_INT16 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:251: warning: Member THIS_UINT32 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:252: warning: Member THIS_INT32 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:253: warning: Member THIS_UINT64 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:254: warning: Member THIS_INT64 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:255: warning: Member THIS_FLOAT32 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:256: warning: Member THIS_FLOAT64 (typedef) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:142: warning: Member FslSeekVolume(FSLIO *fslio, size_t vols) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:157: warning: Member FslFileExists(const char *filename) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:158: warning: Member FslMakeBaseName(const char *fname) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:159: warning: Member FslCheckForMultipleFileNames(const char *filename) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:160: warning: Member FslGetEnvOutputType(void) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:162: warning: Member FslSetIgnoreMFQ(int flag) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:163: warning: Member FslGetIgnoreMFQ(void) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:164: warning: Member FslSetOverrideOutputType(int type) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:165: warning: Member FslGetOverrideOutputType(void) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:168: warning: Member FslGetFileType(const FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:169: warning: Member FslSetFileType(FSLIO *fslio, int filetype) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:170: warning: Member FslIsSingleFileType(int filetype) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:171: warning: Member FslIsCompressedFileType(int filetype) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:172: warning: Member FslBaseFileType(int filetype) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:175: warning: Member FslGetWriteMode(const FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:176: warning: Member FslSetWriteMode(FSLIO *fslio, int mode) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:178: warning: Member AvwSwapHeader(struct dsr *avw) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:179: warning: Member FslReadRawHeader(void *buffer, const char *filename) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:185: warning: Member FslInitHeader(FSLIO *fslio, short t, size_t x, size_t y, size_t z, size_t v, float vx, float vy, float vz, float tr, size_t dim) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:189: warning: Member FslSetInit(FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:190: warning: Member FslCloneHeader(FSLIO *dest, const FSLIO *src) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:195: warning: Member FslGetVolSize(FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:197: warning: Member FslSetDim(FSLIO *fslio, short x, short y, short z, short v) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:198: warning: Member FslGetDim(FSLIO *fslio, short *x, short *y, short *z, short *v) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:199: warning: Member FslSetDimensionality(FSLIO *fslio, size_t dim) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:200: warning: Member FslGetDimensionality(FSLIO *fslio, size_t *dim) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:201: warning: Member FslSetVoxDim(FSLIO *fslio, float x, float y, float z, float tr) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:202: warning: Member FslGetVoxDim(FSLIO *fslio, float *x, float *y, float *z, float *tr) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:203: warning: Member FslGetCalMinMax(FSLIO *fslio, float *min, float *max) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:204: warning: Member FslSetCalMinMax(FSLIO *fslio, float min, float max) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:205: warning: Member FslGetAuxFile(FSLIO *fslio, char *aux_file) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:206: warning: Member FslSetAuxFile(FSLIO *fslio, const char *aux_file) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:207: warning: Member FslSetTimeUnits(FSLIO *fslio, const char *units) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:208: warning: Member FslGetTimeUnits(FSLIO *fslio, char *units) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:209: warning: Member FslSetDataType(FSLIO *fslio, short t) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:210: warning: Member FslGetDataType(FSLIO *fslio, short *t) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:211: warning: Member FslGetIntensityScaling(FSLIO *fslio, float *slope, float *intercept) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:212: warning: Member FslSetIntent(FSLIO *fslio, short intent_code, float p1, float p2, float p3) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:213: warning: Member FslGetIntent(FSLIO *fslio, short *intent_code, float *p1, float *p2, float *p3) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:217: warning: Member FslGetStdXform(FSLIO *fslio, mat44 *stdmat) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:218: warning: Member FslSetStdXform(FSLIO *fslio, short sform_code, mat44 stdmat) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:219: warning: Member FslGetMMCoord(mat44 stdmat, float voxx, float voxy, float voxz, float *mmx, float *mmy, float *mmz) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:222: warning: Member FslGetVoxCoord(mat44 stdmat, float mmx, float mmy, float mmz, float *voxx, float *voxy, float *voxz) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:224: warning: Member FslGetRigidXform(FSLIO *fslio, mat44 *rigidmat) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:225: warning: Member FslSetRigidXform(FSLIO *fslio, short qform_code, mat44 rigidmat) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:226: warning: Member FslGetLeftRightOrder(FSLIO *fslio) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:230: warning: Member FslSetAnalyzeSform(FSLIO *fslio, const short *orig, float dx, float dy, float dz) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:232: warning: Member FslGetAnalyzeOrigin(FSLIO *fslio, short orig[5]) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.h:242: warning: Member mat44_to_mat33(mat44 x) (function) of group FSL_TYPE is not documented. /<>/fsliolib/fslio.c:2107: warning: explicit link request to 'vol' could not be resolved /<>/niftilib/nifti1.h:488: warning: Member DT_NONE (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:489: warning: Member DT_UNKNOWN (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:490: warning: Member DT_BINARY (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:491: warning: Member DT_UNSIGNED_CHAR (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:492: warning: Member DT_SIGNED_SHORT (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:493: warning: Member DT_SIGNED_INT (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:494: warning: Member DT_FLOAT (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:495: warning: Member DT_COMPLEX (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:496: warning: Member DT_DOUBLE (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:497: warning: Member DT_RGB (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:498: warning: Member DT_ALL (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:501: warning: Member DT_UINT8 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:502: warning: Member DT_INT16 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:503: warning: Member DT_INT32 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:504: warning: Member DT_FLOAT32 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:505: warning: Member DT_COMPLEX64 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:506: warning: Member DT_FLOAT64 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:507: warning: Member DT_RGB24 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:510: warning: Member DT_INT8 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:511: warning: Member DT_UINT16 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:512: warning: Member DT_UINT32 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:513: warning: Member DT_INT64 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:514: warning: Member DT_UINT64 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:515: warning: Member DT_FLOAT128 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:516: warning: Member DT_COMPLEX128 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:517: warning: Member DT_COMPLEX256 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:518: warning: Member DT_RGBA32 (macro definition) of group NIFTI1_DATATYPES is not documented. /<>/niftilib/nifti1.h:692: warning: Member NIFTI_INTENT_CORREL (macro definition) of group NIFTI1_INTENT_CODES is not documented. /<>/niftilib/nifti1.h:880: warning: Member NIFTI_INTENT_VECTOR (macro definition) of group NIFTI1_INTENT_CODES is not documented. /<>/niftilib/nifti1.h:970: warning: Member NIFTI_INTENT_FSL_CUBIC_SPLINE_COEFFICIENTS (macro definition) of group NIFTI1_INTENT_CODES is not documented. /<>/niftilib/nifti1.h:971: warning: Member NIFTI_INTENT_FSL_DCT_COEFFICIENTS (macro definition) of group NIFTI1_INTENT_CODES is not documented. /<>/niftilib/nifti1.h:972: warning: Member NIFTI_INTENT_FSL_QUADRATIC_SPLINE_COEFFICIENTS (macro definition) of group NIFTI1_INTENT_CODES is not documented. /<>/niftilib/nifti1.h:984: warning: Member NIFTI_INTENT_FSL_TOPUP_QUADRATIC_SPLINE_COEFFICIENTS (macro definition) of group NIFTI1_INTENT_CODES is not documented. /<>/niftilib/nifti1.h:985: warning: Member NIFTI_INTENT_FSL_TOPUP_FIELD (macro definition) of group NIFTI1_INTENT_CODES is not documented. /<>/niftilib/nifti1.h:1346: warning: Member XYZT_TO_SPACE(xyzt) (macro definition) of group NIFTI1_UNITS is not documented. /<>/niftilib/nifti1.h:1347: warning: Member XYZT_TO_TIME(xyzt) (macro definition) of group NIFTI1_UNITS is not documented. /<>/niftilib/nifti1.h:1350: warning: Member SPACE_TIME_TO_XYZT(ss, tt) (macro definition) of group NIFTI1_UNITS is not documented. /<>/niftilib/nifti1.h:1443: warning: Member DIM_INFO_TO_FREQ_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented. /<>/niftilib/nifti1.h:1444: warning: Member DIM_INFO_TO_PHASE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented. /<>/niftilib/nifti1.h:1445: warning: Member DIM_INFO_TO_SLICE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented. /<>/niftilib/nifti1.h:1448: warning: Member FPS_INTO_DIM_INFO(fd, pd, sd) (macro definition) of group NIFTI1_UNITS is not documented. /<>/niftilib/nifti1.h:1457: warning: Member NIFTI_SLICE_UNKNOWN (macro definition) of group NIFTI1_SLICE_ORDER is not documented. /<>/niftilib/nifti1.h:1458: warning: Member NIFTI_SLICE_SEQ_INC (macro definition) of group NIFTI1_SLICE_ORDER is not documented. /<>/niftilib/nifti1.h:1459: warning: Member NIFTI_SLICE_SEQ_DEC (macro definition) of group NIFTI1_SLICE_ORDER is not documented. /<>/niftilib/nifti1.h:1460: warning: Member NIFTI_SLICE_ALT_INC (macro definition) of group NIFTI1_SLICE_ORDER is not documented. /<>/niftilib/nifti1.h:1461: warning: Member NIFTI_SLICE_ALT_DEC (macro definition) of group NIFTI1_SLICE_ORDER is not documented. /<>/niftilib/nifti1.h:1462: warning: Member NIFTI_SLICE_ALT_INC2 (macro definition) of group NIFTI1_SLICE_ORDER is not documented. /<>/niftilib/nifti1.h:1463: warning: Member NIFTI_SLICE_ALT_DEC2 (macro definition) of group NIFTI1_SLICE_ORDER is not documented. /<>/niftilib/nifti1.h:1: warning: Member nifti_1_header (typedef) of file nifti1.h is not documented. /<>/niftilib/nifti1.h:1: warning: Member nifti1_extender (typedef) of file nifti1.h is not documented. /<>/niftilib/nifti1.h:1: warning: Member nifti1_extension (typedef) of file nifti1.h is not documented. /<>/niftilib/nifti1_io.c:1: warning: Member _NIFTI1_IO_C_ (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:2415: warning: Member USE_STAT (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:3605: warning: Member ERREX(msg) (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:3899: warning: Member ERREX(msg) (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:5687: warning: Member ERREX(msg) (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:5942: warning: Member CR (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:5943: warning: Member LF (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:6374: warning: Member QQNUM(n1, n2, tt) (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:6378: warning: Member QNUM(nam, tt) (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:6383: warning: Member QSTR(nam, ml) (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:7218: warning: Member ISEND(c) (macro definition) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:5119: warning: Member nifti_write_buffer(znzFile fp, const void *buffer, size_t numbytes) (function) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:5546: warning: Member nifti_copy_extensions(nifti_image *nim_dest, const nifti_image *nim_src) (function) of file nifti1_io.c is not documented. /<>/niftilib/nifti1_io.c:3451: warning: found at different nesting level (4) than expected (2) /<>/niftilib/nifti1_io.c:3452: warning: end of comment block while expecting command /<>/niftilib/nifti1_io.c:4479: warning: argument 'length' of command @param is not found in the argument list of nifti_add_extension(nifti_image *nim, const char *data, int len, int ecode) /<>/niftilib/nifti1_io.c:4495: warning: The following parameter of nifti_add_extension(nifti_image *nim, const char *data, int len, int ecode) is not documented: parameter 'len' /<>/niftilib/nifti1_io.c:2579: warning: Found unknown command '\caution' /<>/niftilib/nifti1_io.c:2908: warning: Found unknown command '\nifti_type' /<>/niftilib/nifti1_io.c:2841: warning: The following parameter of nifti_findimgname(const char *fname, int nifti_type) is not documented: parameter 'nifti_type' /<>/niftilib/nifti1_io.c:1671: warning: found at different nesting level (5) than expected (2) /<>/niftilib/nifti1_io.c:1672: warning: end of comment block while expecting command /<>/niftilib/nifti1_io.c:6887: warning: found at different nesting level (7) than expected (2) /<>/niftilib/nifti1_io.c:6891: warning: end of comment block while expecting command /<>/niftilib/nifti1_io.c:6876: warning: found tag without matching 
/<>/niftilib/nifti1_io.h:16: warning: Member DONT_INCLUDE_ANALYZE_STRUCT (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:374: warning: Member NIFTI_L2R (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:375: warning: Member NIFTI_R2L (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:376: warning: Member NIFTI_P2A (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:377: warning: Member NIFTI_A2P (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:378: warning: Member NIFTI_I2S (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:379: warning: Member NIFTI_S2I (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:429: warning: Member NIFTI_ECODE_IGNORE (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:431: warning: Member NIFTI_ECODE_DICOM (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:434: warning: Member NIFTI_ECODE_AFNI (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:436: warning: Member NIFTI_ECODE_COMMENT (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:441: warning: Member NIFTI_ECODE_XCEDE (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:445: warning: Member NIFTI_ECODE_JIMDIMINFO (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:450: warning: Member NIFTI_ECODE_WORKFLOW_FWDS (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:452: warning: Member NIFTI_ECODE_FREESURFER (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:456: warning: Member NIFTI_ECODE_PYPICKLE (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:459: warning: Member NIFTI_ECODE_MIND_IDENT (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:460: warning: Member NIFTI_ECODE_B_VALUE (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:461: warning: Member NIFTI_ECODE_SPHERICAL_DIRECTION (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:462: warning: Member NIFTI_ECODE_DT_COMPONENT (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:463: warning: Member NIFTI_ECODE_SHC_DEGREEORDER (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:465: warning: Member NIFTI_ECODE_VOXBO (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:470: warning: Member NIFTI_ECODE_CARET (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:472: warning: Member NIFTI_ECODE_CIFTI (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:474: warning: Member NIFTI_ECODE_VARIABLE_FRAME_TIMING (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:478: warning: Member NIFTI_ECODE_EVAL (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:481: warning: Member NIFTI_ECODE_MATLAB (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:485: warning: Member NIFTI_ECODE_QUANTIPHYSE (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:489: warning: Member NIFTI_ECODE_MRS (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:491: warning: Member NIFTI_MAX_ECODE (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:494: warning: Member NIFTI_FTYPE_ANALYZE (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:495: warning: Member NIFTI_FTYPE_NIFTI1_1 (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:496: warning: Member NIFTI_FTYPE_NIFTI1_2 (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:497: warning: Member NIFTI_FTYPE_ASCII (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:498: warning: Member NIFTI_MAX_FTYPE (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:519: warning: Member LNI_FERR(func, msg, file) (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:524: warning: Member swap_2(s) (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:525: warning: Member swap_4(v) (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:537: warning: Member IS_GOOD_FLOAT(x) (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:538: warning: Member FIXED_FLOAT(x) (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:542: warning: Member ASSIF(p, v) (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:547: warning: Member LSB_FIRST (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:548: warning: Member MSB_FIRST (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:549: warning: Member REVERSE_ORDER(x) (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:551: warning: Member LNI_MAX_NIA_EXT_LEN (macro definition) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:80: warning: Member analyze_75_orient_code (typedef) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:72: warning: Member _analyze75_orient_code (enumeration) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:347: warning: Member nifti_write_buffer(znzFile fp, const void *buffer, size_t numbytes) (function) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.h:417: warning: Member nifti_copy_extensions(nifti_image *nim_dest, const nifti_image *nim_src) (function) of file nifti1_io.h is not documented.
/<>/niftilib/nifti1_io.c:3451: warning: found
at different nesting level (4) than expected (2) /<>/niftilib/nifti1_io.c:3452: warning: end of comment block while expecting command /<>/niftilib/nifti1_io.c:4479: warning: argument 'length' of command @param is not found in the argument list of nifti_add_extension(nifti_image *nim, const char *data, int len, int ecode) /<>/niftilib/nifti1_io.h:414: warning: The following parameter of nifti_add_extension(nifti_image *nim, const char *data, int len, int ecode) is not documented: parameter 'len' /<>/niftilib/nifti1_io.c:2579: warning: Found unknown command '\caution' /<>/niftilib/nifti1_io.c:2908: warning: Found unknown command '\nifti_type' /<>/niftilib/nifti1_io.h:386: warning: The following parameter of nifti_findimgname(const char *fname, int nifti_type) is not documented: parameter 'nifti_type' /<>/niftilib/nifti1_io.c:1671: warning: found at different nesting level (5) than expected (2) /<>/niftilib/nifti1_io.c:1672: warning: end of comment block while expecting command /<>/niftilib/nifti1_io.c:6887: warning: found at different nesting level (7) than expected (2) /<>/niftilib/nifti1_io.c:6891: warning: end of comment block while expecting command /<>/niftilib/nifti1_io.c:6876: warning: found tag without matching 
/<>/znzlib/znzlib.c:131: warning: Member ZNZ_MAX_BLOCK_SIZE (macro definition) of file znzlib.c is not documented.
/<>/znzlib/znzlib.c:48: warning: Member znzopen(const char *path, const char *mode, int use_compression) (function) of file znzlib.c is not documented.
/<>/znzlib/znzlib.c:113: warning: Member Xznzclose(znzFile *file) (function) of file znzlib.c is not documented.
/<>/znzlib/znzlib.c:133: warning: Member znzread(void *buf, size_t size, size_t nmemb, znzFile file) (function) of file znzlib.c is not documented.
/<>/znzlib/znzlib.c:167: warning: Member znzwrite(const void *buf, size_t size, size_t nmemb, znzFile file) (function) of file znzlib.c is not documented.
/<>/znzlib/znzlib.c:201: warning: Member znzseek(znzFile file, znz_off_t offset, int whence) (function) of file znzlib.c is not documented.
/<>/znzlib/znzlib.c:210: warning: Member znzrewind(znzFile stream) (function) of file znzlib.c is not documented.
/<>/znzlib/znzlib.c:226: warning: Member znztell(znzFile file) (function) of file znzlib.c is not documented.
/<>/znzlib/znzlib.c:235: warning: Member znzputs(const char *str, znzFile file) (function) of file znzlib.c is not documented.
/<>/fsliolib/fslio.h:104: warning: Member FSL_TYPE_ANALYZE (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:105: warning: Member FSL_TYPE_NIFTI (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:106: warning: Member FSL_TYPE_NIFTI_PAIR (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:107: warning: Member FSL_TYPE_MINC (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:108: warning: Member FSL_TYPE_ANALYZE_GZ (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:109: warning: Member FSL_TYPE_NIFTI_GZ (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:110: warning: Member FSL_TYPE_NIFTI_PAIR_GZ (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:111: warning: Member FSL_TYPE_MINC_GZ (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:114: warning: Member FSL_RADIOLOGICAL (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:115: warning: Member FSL_NEUROLOGICAL (macro definition) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:247: warning: Member THIS_UINT8 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:248: warning: Member THIS_INT8 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:249: warning: Member THIS_UINT16 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:250: warning: Member THIS_INT16 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:251: warning: Member THIS_UINT32 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:252: warning: Member THIS_INT32 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:253: warning: Member THIS_UINT64 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:254: warning: Member THIS_INT64 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:255: warning: Member THIS_FLOAT32 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:256: warning: Member THIS_FLOAT64 (typedef) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:142: warning: Member FslSeekVolume(FSLIO *fslio, size_t vols) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:157: warning: Member FslFileExists(const char *filename) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:158: warning: Member FslMakeBaseName(const char *fname) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:159: warning: Member FslCheckForMultipleFileNames(const char *filename) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:160: warning: Member FslGetEnvOutputType(void) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:162: warning: Member FslSetIgnoreMFQ(int flag) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:163: warning: Member FslGetIgnoreMFQ(void) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:164: warning: Member FslSetOverrideOutputType(int type) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:165: warning: Member FslGetOverrideOutputType(void) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:168: warning: Member FslGetFileType(const FSLIO *fslio) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:169: warning: Member FslSetFileType(FSLIO *fslio, int filetype) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:170: warning: Member FslIsSingleFileType(int filetype) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:171: warning: Member FslIsCompressedFileType(int filetype) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:172: warning: Member FslBaseFileType(int filetype) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:175: warning: Member FslGetWriteMode(const FSLIO *fslio) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:176: warning: Member FslSetWriteMode(FSLIO *fslio, int mode) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:178: warning: Member AvwSwapHeader(struct dsr *avw) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:179: warning: Member FslReadRawHeader(void *buffer, const char *filename) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:185: warning: Member FslInitHeader(FSLIO *fslio, short t, size_t x, size_t y, size_t z, size_t v, float vx, float vy, float vz, float tr, size_t dim) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:189: warning: Member FslSetInit(FSLIO *fslio) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:190: warning: Member FslCloneHeader(FSLIO *dest, const FSLIO *src) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:195: warning: Member FslGetVolSize(FSLIO *fslio) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:197: warning: Member FslSetDim(FSLIO *fslio, short x, short y, short z, short v) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:198: warning: Member FslGetDim(FSLIO *fslio, short *x, short *y, short *z, short *v) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:199: warning: Member FslSetDimensionality(FSLIO *fslio, size_t dim) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:200: warning: Member FslGetDimensionality(FSLIO *fslio, size_t *dim) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:201: warning: Member FslSetVoxDim(FSLIO *fslio, float x, float y, float z, float tr) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:202: warning: Member FslGetVoxDim(FSLIO *fslio, float *x, float *y, float *z, float *tr) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:203: warning: Member FslGetCalMinMax(FSLIO *fslio, float *min, float *max) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:204: warning: Member FslSetCalMinMax(FSLIO *fslio, float min, float max) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:205: warning: Member FslGetAuxFile(FSLIO *fslio, char *aux_file) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:206: warning: Member FslSetAuxFile(FSLIO *fslio, const char *aux_file) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:207: warning: Member FslSetTimeUnits(FSLIO *fslio, const char *units) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:208: warning: Member FslGetTimeUnits(FSLIO *fslio, char *units) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:209: warning: Member FslSetDataType(FSLIO *fslio, short t) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:210: warning: Member FslGetDataType(FSLIO *fslio, short *t) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:211: warning: Member FslGetIntensityScaling(FSLIO *fslio, float *slope, float *intercept) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:212: warning: Member FslSetIntent(FSLIO *fslio, short intent_code, float p1, float p2, float p3) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:213: warning: Member FslGetIntent(FSLIO *fslio, short *intent_code, float *p1, float *p2, float *p3) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:217: warning: Member FslGetStdXform(FSLIO *fslio, mat44 *stdmat) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:218: warning: Member FslSetStdXform(FSLIO *fslio, short sform_code, mat44 stdmat) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:219: warning: Member FslGetMMCoord(mat44 stdmat, float voxx, float voxy, float voxz, float *mmx, float *mmy, float *mmz) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:222: warning: Member FslGetVoxCoord(mat44 stdmat, float mmx, float mmy, float mmz, float *voxx, float *voxy, float *voxz) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:224: warning: Member FslGetRigidXform(FSLIO *fslio, mat44 *rigidmat) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:225: warning: Member FslSetRigidXform(FSLIO *fslio, short qform_code, mat44 rigidmat) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:226: warning: Member FslGetLeftRightOrder(FSLIO *fslio) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:230: warning: Member FslSetAnalyzeSform(FSLIO *fslio, const short *orig, float dx, float dy, float dz) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:232: warning: Member FslGetAnalyzeOrigin(FSLIO *fslio, short orig[5]) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.h:242: warning: Member mat44_to_mat33(mat44 x) (function) of group FSL_TYPE is not documented.
/<>/fsliolib/fslio.c:2107: warning: explicit link request to 'vol' could not be resolved
/<>/fsliolib/fslio.h:125: warning: Member fileptr (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:126: warning: Member niftiptr (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:130: warning: Member mincptr (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:132: warning: Member file_mode (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:133: warning: Member write_mode (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:134: warning: Member written_hdr (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.c:2107: warning: explicit link request to 'vol' could not be resolved
/<>/niftilib/nifti1.h:488: warning: Member DT_NONE (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:489: warning: Member DT_UNKNOWN (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:490: warning: Member DT_BINARY (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:491: warning: Member DT_UNSIGNED_CHAR (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:492: warning: Member DT_SIGNED_SHORT (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:493: warning: Member DT_SIGNED_INT (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:494: warning: Member DT_FLOAT (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:495: warning: Member DT_COMPLEX (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:496: warning: Member DT_DOUBLE (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:497: warning: Member DT_RGB (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:498: warning: Member DT_ALL (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:501: warning: Member DT_UINT8 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:502: warning: Member DT_INT16 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:503: warning: Member DT_INT32 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:504: warning: Member DT_FLOAT32 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:505: warning: Member DT_COMPLEX64 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:506: warning: Member DT_FLOAT64 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:507: warning: Member DT_RGB24 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:510: warning: Member DT_INT8 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:511: warning: Member DT_UINT16 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:512: warning: Member DT_UINT32 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:513: warning: Member DT_INT64 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:514: warning: Member DT_UINT64 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:515: warning: Member DT_FLOAT128 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:516: warning: Member DT_COMPLEX128 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:517: warning: Member DT_COMPLEX256 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:518: warning: Member DT_RGBA32 (macro definition) of group NIFTI1_DATATYPES is not documented.
/<>/niftilib/nifti1.h:692: warning: Member NIFTI_INTENT_CORREL (macro definition) of group NIFTI1_INTENT_CODES is not documented.
/<>/niftilib/nifti1.h:880: warning: Member NIFTI_INTENT_VECTOR (macro definition) of group NIFTI1_INTENT_CODES is not documented.
/<>/niftilib/nifti1.h:970: warning: Member NIFTI_INTENT_FSL_CUBIC_SPLINE_COEFFICIENTS (macro definition) of group NIFTI1_INTENT_CODES is not documented.
/<>/niftilib/nifti1.h:971: warning: Member NIFTI_INTENT_FSL_DCT_COEFFICIENTS (macro definition) of group NIFTI1_INTENT_CODES is not documented.
/<>/niftilib/nifti1.h:972: warning: Member NIFTI_INTENT_FSL_QUADRATIC_SPLINE_COEFFICIENTS (macro definition) of group NIFTI1_INTENT_CODES is not documented.
/<>/niftilib/nifti1.h:984: warning: Member NIFTI_INTENT_FSL_TOPUP_QUADRATIC_SPLINE_COEFFICIENTS (macro definition) of group NIFTI1_INTENT_CODES is not documented.
/<>/niftilib/nifti1.h:985: warning: Member NIFTI_INTENT_FSL_TOPUP_FIELD (macro definition) of group NIFTI1_INTENT_CODES is not documented.
/<>/niftilib/nifti1.h:1346: warning: Member XYZT_TO_SPACE(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/<>/niftilib/nifti1.h:1347: warning: Member XYZT_TO_TIME(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/<>/niftilib/nifti1.h:1350: warning: Member SPACE_TIME_TO_XYZT(ss, tt) (macro definition) of group NIFTI1_UNITS is not documented.
/<>/niftilib/nifti1.h:1443: warning: Member DIM_INFO_TO_FREQ_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/<>/niftilib/nifti1.h:1444: warning: Member DIM_INFO_TO_PHASE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/<>/niftilib/nifti1.h:1445: warning: Member DIM_INFO_TO_SLICE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/<>/niftilib/nifti1.h:1448: warning: Member FPS_INTO_DIM_INFO(fd, pd, sd) (macro definition) of group NIFTI1_UNITS is not documented.
/<>/niftilib/nifti1.h:1457: warning: Member NIFTI_SLICE_UNKNOWN (macro definition) of group NIFTI1_SLICE_ORDER is not documented.
/<>/niftilib/nifti1.h:1458: warning: Member NIFTI_SLICE_SEQ_INC (macro definition) of group NIFTI1_SLICE_ORDER is not documented.
/<>/niftilib/nifti1.h:1459: warning: Member NIFTI_SLICE_SEQ_DEC (macro definition) of group NIFTI1_SLICE_ORDER is not documented.
/<>/niftilib/nifti1.h:1460: warning: Member NIFTI_SLICE_ALT_INC (macro definition) of group NIFTI1_SLICE_ORDER is not documented.
/<>/niftilib/nifti1.h:1461: warning: Member NIFTI_SLICE_ALT_DEC (macro definition) of group NIFTI1_SLICE_ORDER is not documented.
/<>/niftilib/nifti1.h:1462: warning: Member NIFTI_SLICE_ALT_INC2 (macro definition) of group NIFTI1_SLICE_ORDER is not documented.
/<>/niftilib/nifti1.h:1463: warning: Member NIFTI_SLICE_ALT_DEC2 (macro definition) of group NIFTI1_SLICE_ORDER is not documented.
/<>/niftilib/nifti1.h:291: warning: Member extension[4] (variable) of struct nifti1_extender is not documented.
/<>/fsliolib/dbh.h:98: warning: Member real (variable) of struct COMPLEX is not documented.
/<>/fsliolib/dbh.h:99: warning: Member imag (variable) of struct COMPLEX is not documented.
/<>/fsliolib/dbh.h:57: warning: Member descrip[80] (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:58: warning: Member aux_file[24] (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:59: warning: Member orient (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:60: warning: Member originator[10] (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:61: warning: Member generated[10] (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:62: warning: Member scannum[10] (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:63: warning: Member patient_id[10] (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:64: warning: Member exp_date[10] (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:65: warning: Member exp_time[10] (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:66: warning: Member hist_un0[3] (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:67: warning: Member views (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:68: warning: Member vols_added (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:69: warning: Member start_field (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:70: warning: Member field_skip (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:71: warning: Member omax (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:71: warning: Member omin (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:72: warning: Member smax (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:72: warning: Member smin (variable) of struct data_history is not documented.
/<>/fsliolib/dbh.h:72: warning: Member hk (variable) of struct dsr is not documented.
/<>/fsliolib/dbh.h:72: warning: Member dime (variable) of struct dsr is not documented.
/<>/fsliolib/dbh.h:72: warning: Member hist (variable) of struct dsr is not documented.
/<>/niftilib/nifti1_tool.h:81: warning: Member type (variable) of struct field_s is not documented.
/<>/niftilib/nifti1_tool.h:82: warning: Member offset (variable) of struct field_s is not documented.
/<>/niftilib/nifti1_tool.h:83: warning: Member size (variable) of struct field_s is not documented.
/<>/niftilib/nifti1_tool.h:84: warning: Member len (variable) of struct field_s is not documented.
/<>/niftilib/nifti1_tool.h:85: warning: Member name[NT_FIELD_NAME_LEN] (variable) of struct field_s is not documented.
/<>/fsliolib/fslio.h:125: warning: Member fileptr (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:126: warning: Member niftiptr (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:130: warning: Member mincptr (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:132: warning: Member file_mode (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:133: warning: Member write_mode (variable) of struct FSLIO is not documented.
/<>/fsliolib/fslio.h:134: warning: Member written_hdr (variable) of struct FSLIO is not documented.
/<>/fsliolib/dbh.h:18: warning: Member sizeof_hdr (variable) of struct header_key is not documented.
/<>/fsliolib/dbh.h:19: warning: Member data_type[10] (variable) of struct header_key is not documented.
/<>/fsliolib/dbh.h:20: warning: Member db_name[18] (variable) of struct header_key is not documented.
/<>/fsliolib/dbh.h:21: warning: Member extents (variable) of struct header_key is not documented.
/<>/fsliolib/dbh.h:22: warning: Member session_error (variable) of struct header_key is not documented.
/<>/fsliolib/dbh.h:23: warning: Member regular (variable) of struct header_key is not documented.
/<>/fsliolib/dbh.h:24: warning: Member hkey_un0 (variable) of struct header_key is not documented.
/<>/fsliolib/dbh.h:29: warning: Member dim[8] (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:30: warning: Member vox_units[4] (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:31: warning: Member cal_units[8] (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:32: warning: Member unused1 (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:33: warning: Member datatype (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:34: warning: Member bitpix (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:35: warning: Member dim_un0 (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:36: warning: Member pixdim[8] (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:44: warning: Member vox_offset (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:45: warning: Member funused1 (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:46: warning: Member funused2 (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:47: warning: Member funused3 (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:48: warning: Member cal_max (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:49: warning: Member cal_min (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:50: warning: Member compressed (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:51: warning: Member verified (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:52: warning: Member glmax (variable) of struct image_dimension is not documented.
/<>/fsliolib/dbh.h:52: warning: Member glmin (variable) of struct image_dimension is not documented.
/<>/niftilib/nifti1_tool.h:12: warning: Member len (variable) of struct int_list is not documented.
/<>/niftilib/nifti1_tool.h:13: warning: Member list (variable) of struct int_list is not documented.
/<>/niftilib/nifti1.h:291: warning: Member extension[4] (variable) of struct nifti1_extender is not documented.
/<>/niftilib/nifti1_io.h:190: warning: Member sizeof_hdr (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:191: warning: Member data_type[10] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:192: warning: Member db_name[18] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:193: warning: Member extents (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:194: warning: Member session_error (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:195: warning: Member regular (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:196: warning: Member hkey_un0 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:199: warning: Member dim[8] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:200: warning: Member unused8 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:201: warning: Member unused9 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:202: warning: Member unused10 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:203: warning: Member unused11 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:204: warning: Member unused12 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:205: warning: Member unused13 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:206: warning: Member unused14 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:207: warning: Member datatype (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:208: warning: Member bitpix (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:209: warning: Member dim_un0 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:210: warning: Member pixdim[8] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:212: warning: Member vox_offset (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:213: warning: Member funused1 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:214: warning: Member funused2 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:215: warning: Member funused3 (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:218: warning: Member cal_max (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:219: warning: Member cal_min (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:220: warning: Member compressed (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:221: warning: Member verified (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:222: warning: Member glmax (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:222: warning: Member glmin (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:225: warning: Member descrip[80] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:226: warning: Member aux_file[24] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:227: warning: Member orient (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:228: warning: Member originator[10] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:229: warning: Member generated[10] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:230: warning: Member scannum[10] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:231: warning: Member patient_id[10] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:232: warning: Member exp_date[10] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:233: warning: Member exp_time[10] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:234: warning: Member hist_un0[3] (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:235: warning: Member views (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:236: warning: Member vols_added (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:237: warning: Member start_field (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:238: warning: Member field_skip (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:239: warning: Member omax (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:239: warning: Member omin (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:240: warning: Member smax (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:240: warning: Member smin (variable) of struct nifti_analyze75 is not documented.
/<>/niftilib/nifti1_io.h:176: warning: Member nbricks (variable) of struct nifti_brick_list is not documented.
/<>/niftilib/nifti1_io.h:177: warning: Member bsize (variable) of struct nifti_brick_list is not documented.
/<>/niftilib/nifti1_io.h:178: warning: Member bricks (variable) of struct nifti_brick_list is not documented.
/<>/niftilib/nifti1_io.h:132: warning: Member quatern_c (variable) of struct nifti_image is not documented.
/<>/niftilib/nifti1_io.h:132: warning: Member quatern_d (variable) of struct nifti_image is not documented.
/<>/niftilib/nifti1_io.h:133: warning: Member qoffset_x (variable) of struct nifti_image is not documented.
/<>/niftilib/nifti1_io.h:133: warning: Member qoffset_y (variable) of struct nifti_image is not documented.
/<>/niftilib/nifti1_io.h:133: warning: Member qoffset_z (variable) of struct nifti_image is not documented.
/<>/niftilib/nifti1_io.h:134: warning: Member qfac (variable) of struct nifti_image is not documented.
/<>/niftilib/nifti1_io.h:498: warning: Member type (variable) of struct nifti_type_ele is not documented.
/<>/niftilib/nifti1_io.h:499: warning: Member nbyper (variable) of struct nifti_type_ele is not documented.
/<>/niftilib/nifti1_io.h:500: warning: Member swapsize (variable) of struct nifti_type_ele is not documented.
/<>/niftilib/nifti1_io.h:501: warning: Member name (variable) of struct nifti_type_ele is not documented.
/<>/niftilib/nifti1_tool.h:18: warning: Member check_hdr (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:18: warning: Member check_nim (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:19: warning: Member diff_hdr (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:19: warning: Member diff_nim (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:20: warning: Member disp_hdr (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:20: warning: Member disp_nim (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:20: warning: Member disp_ana (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:21: warning: Member disp_exts (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:21: warning: Member add_exts (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:21: warning: Member rm_exts (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:22: warning: Member mod_hdr (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:22: warning: Member mod_nim (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:23: warning: Member swap_hdr (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:23: warning: Member swap_ana (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:23: warning: Member swap_old (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:25: warning: Member strip (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:26: warning: Member cbl (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:26: warning: Member cci (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:27: warning: Member dts (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:27: warning: Member dci (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:27: warning: Member dci_lines (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:28: warning: Member make_im (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:29: warning: Member ci_dims[8] (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:30: warning: Member new_dim[8] (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:31: warning: Member new_datatype (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:32: warning: Member debug (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:32: warning: Member keep_hist (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:33: warning: Member overwrite (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:34: warning: Member prefix (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:35: warning: Member elist (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:36: warning: Member etypes (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:37: warning: Member flist (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:38: warning: Member vlist (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:39: warning: Member infiles (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:40: warning: Member command[NT_CMD_LEN] (variable) of struct nt_opts is not documented.
/<>/niftilib/nifti1_tool.h:7: warning: Member len (variable) of struct str_list is not documented.
/<>/niftilib/nifti1_tool.h:8: warning: Member list (variable) of struct str_list is not documented.
/<>/znzlib/znzlib.h:80: warning: Member withz (variable) of struct znzptr is not documented.
/<>/znzlib/znzlib.h:81: warning: Member nzfptr (variable) of struct znzptr is not documented.
ng disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file /<>/fsliolib/dbh.h...
Generating code for file /<>/fsliolib/fslio.h...
Generating code for file /<>/niftilib/nifti1.h...
Generating code for file /<>/niftilib/nifti1_io.h...
Generating code for file /<>/niftilib/nifti1_io_version.h...
Generating code for file /<>/niftilib/nifti1_tool.h...
Generating code for file /<>/znzlib/znzlib.h...
Generating code for file /<>/znzlib/znzlib_version.h...
Generating file documentation...
Generating docs for file /<>/fsliolib/fslio.c...
Generating docs for file /<>/fsliolib/fslio.h...
Generating docs for file /<>/niftilib/nifti1.h...
Generating docs for file /<>/niftilib/nifti1_io.c...
Generating docs for file /<>/niftilib/nifti1_io.h...
Generating docs for file /<>/znzlib/znzlib.c...
Generating page documentation...
Generating group documentation...
Generating dependency graph for group NIFTI1_DATATYPES
Generating dependency graph for group NIFTI1_DATATYPE_ALIASES
Generating dependency graph for group NIFTI1_INTENT_CODES
Generating dependency graph for group NIFTI1_XFORM_CODES
Generating dependency graph for group NIFTI1_UNITS
Generating dependency graph for group NIFTI1_SLICE_ORDER
Generating class documentation...
Generating docs for compound COMPLEX...
Generating docs for compound data_history...
Generating docs for compound dsr...
Generating docs for compound field_s...
Generating docs for compound FSLIO...
Generating docs for compound header_key...
Generating docs for compound image_dimension...
Generating docs for compound int_list...
Generating docs for compound mat33...
Generating docs for compound mat44...
Generating docs for compound nifti1_extender...
Generating docs for compound nifti1_extension...
Generating docs for compound nifti_1_header...
Generating docs for compound nifti_analyze75...
Generating docs for compound nifti_brick_list...
Generating docs for compound nifti_global_options...
Generating docs for compound nifti_image...
Generating docs for compound nifti_type_ele...
Generating docs for compound nt_opts...
Generating docs for compound str_list...
Generating docs for compound znzptr...
Generating namespace index...
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory /<>/fsliolib
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
Generating dot graphs using 5 parallel threads...
Running dot for graph 1/20
Running dot for graph 2/20
Running dot for graph 3/20
Running dot for graph 4/20
Running dot for graph 5/20
Running dot for graph 6/20
Running dot for graph 7/20
Running dot for graph 8/20
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Running dot for graph 10/20
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Running dot for graph 12/20
Running dot for graph 13/20
Running dot for graph 14/20
Running dot for graph 15/20
Running dot for graph 16/20
Running dot for graph 17/20
Running dot for graph 18/20
Running dot for graph 19/20
Running dot for graph 20/20
Patching output file 1/17
Patching output file 2/17
Patching output file 3/17
Patching output file 4/17
Patching output file 5/17
Patching output file 6/17
Patching output file 7/17
Patching output file 8/17
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Patching output file 10/17
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Patching output file 16/17
Patching output file 17/17
lookup cache used 702/65536 hits=2465 misses=727
finished...
# remove jquery (use from package dependency)
rm -f docs/html/jquery.js
make[1]: Leaving directory '/<>'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<>'
cd DEB_build_static && ctest
*********************************
No test configuration file found!
*********************************
Usage

  ctest [options]

make[1]: Leaving directory '/<>'
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=cmake
   dh_prep -O--buildsystem=cmake
   dh_installdirs -O--buildsystem=cmake
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<>'
# install binaries and shared libs
cd DEB_build_shared && /usr/bin/make install DESTDIR=/<>/debian/tmp
make[2]: Entering directory '/<>/DEB_build_shared'
/usr/bin/cmake -S/<> -B/<>/DEB_build_shared --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/<>/DEB_build_shared'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/<>/DEB_build_shared'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<>/debian/tmp/usr/lib/libznz.so.3.0.0
-- Installing: /<>/debian/tmp/usr/lib/libznz.so.3
-- Set runtime path of "/<>/debian/tmp/usr/lib/libznz.so.3.0.0" to "$ORIGIN/../lib"
-- Installing: /<>/debian/tmp/usr/lib/libznz.so
-- Installing: /<>/debian/tmp/usr/include/nifti/znzlib.h
-- Installing: /<>/debian/tmp/usr/lib/libniftiio.so.2.1.0
-- Installing: /<>/debian/tmp/usr/lib/libniftiio.so.2
-- Set runtime path of "/<>/debian/tmp/usr/lib/libniftiio.so.2.1.0" to "$ORIGIN/../lib"
-- Installing: /<>/debian/tmp/usr/lib/libniftiio.so
-- Installing: /<>/debian/tmp/usr/include/nifti/nifti1_io.h
-- Installing: /<>/debian/tmp/usr/include/nifti/nifti1.h
-- Installing: /<>/debian/tmp/usr/bin/nifti1_tool
-- Set runtime path of "/<>/debian/tmp/usr/bin/nifti1_tool" to "$ORIGIN/../lib"
-- Installing: /<>/debian/tmp/usr/lib/libnifticdf.so.2.1.0
-- Installing: /<>/debian/tmp/usr/lib/libnifticdf.so.2
-- Set runtime path of "/<>/debian/tmp/usr/lib/libnifticdf.so.2.1.0" to "$ORIGIN/../lib"
-- Installing: /<>/debian/tmp/usr/lib/libnifticdf.so
-- Installing: /<>/debian/tmp/usr/include/nifti/nifticdf.h
-- Installing: /<>/debian/tmp/usr/bin/nifti_stats
-- Set runtime path of "/<>/debian/tmp/usr/bin/nifti_stats" to "$ORIGIN/../lib"
-- Installing: /<>/debian/tmp/usr/lib/libnifti2.so.2.1.0
-- Installing: /<>/debian/tmp/usr/lib/libnifti2.so.2
-- Set runtime path of "/<>/debian/tmp/usr/lib/libnifti2.so.2.1.0" to "$ORIGIN/../lib"
-- Installing: /<>/debian/tmp/usr/lib/libnifti2.so
-- Up-to-date: /<>/debian/tmp/usr/include/nifti/nifti1.h
-- Installing: /<>/debian/tmp/usr/include/nifti/nifti2.h
-- Installing: /<>/debian/tmp/usr/include/nifti/nifti2_io.h
-- Installing: /<>/debian/tmp/usr/bin/nifti_tool
-- Set runtime path of "/<>/debian/tmp/usr/bin/nifti_tool" to "$ORIGIN/../lib"
-- Installing: /<>/debian/tmp/usr/share/cmake/NIFTI/NIFTITargets.cmake
-- Installing: /<>/debian/tmp/usr/share/cmake/NIFTI/NIFTITargets-none.cmake
-- Installing: /<>/debian/tmp/usr/share/cmake/NIFTI/NIFTIConfig.cmake
-- Installing: /<>/debian/tmp/usr/share/cmake/NIFTI/NIFTIConfigVersion.cmake
make[2]: Leaving directory '/<>/DEB_build_shared'
# install static libs
cd DEB_build_static/znzlib \
	&& /usr/bin/make install DESTDIR=/<>/debian/tmp
make[2]: Entering directory '/<>/DEB_build_static/znzlib'
cd /<>/DEB_build_static && /usr/bin/cmake -S/<> -B/<>/DEB_build_static --check-build-system CMakeFiles/Makefile.cmake 0
cd /<>/DEB_build_static && /usr/bin/make  -f CMakeFiles/Makefile2 znzlib/preinstall
make[3]: Entering directory '/<>/DEB_build_static'
make[3]: Nothing to be done for 'znzlib/preinstall'.
make[3]: Leaving directory '/<>/DEB_build_static'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
make[2]: Leaving directory '/<>/DEB_build_static/znzlib'
cd DEB_build_static/niftilib \
	&& /usr/bin/make	install DESTDIR=/<>/debian/tmp
make[2]: Entering directory '/<>/DEB_build_static/niftilib'
cd /<>/DEB_build_static && /usr/bin/cmake -S/<> -B/<>/DEB_build_static --check-build-system CMakeFiles/Makefile.cmake 0
cd /<>/DEB_build_static && /usr/bin/make  -f CMakeFiles/Makefile2 niftilib/preinstall
make[3]: Entering directory '/<>/DEB_build_static'
make[3]: Nothing to be done for 'niftilib/preinstall'.
make[3]: Leaving directory '/<>/DEB_build_static'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
make[2]: Leaving directory '/<>/DEB_build_static/niftilib'
cd DEB_build_static/nifticdf \
	&& /usr/bin/make	install DESTDIR=/<>/debian/tmp
make[2]: Entering directory '/<>/DEB_build_static/nifticdf'
cd /<>/DEB_build_static && /usr/bin/cmake -S/<> -B/<>/DEB_build_static --check-build-system CMakeFiles/Makefile.cmake 0
cd /<>/DEB_build_static && /usr/bin/make  -f CMakeFiles/Makefile2 nifticdf/preinstall
make[3]: Entering directory '/<>/DEB_build_static'
make[3]: Nothing to be done for 'nifticdf/preinstall'.
make[3]: Leaving directory '/<>/DEB_build_static'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
make[2]: Leaving directory '/<>/DEB_build_static/nifticdf'
cp -a DEB_build_static/*/lib*.a debian/tmp/usr/lib
# install manpage
DEB_build_static/utils/nifti_tool -help | \
	python3 debian/makeniftitoolmanpage.py > debian/tmp/nifti_tool.1
/bin/sh: 1: DEB_build_static/utils/nifti_tool: not found
# Remove unecessary header file
rm -f /<>/debian/tmp/usr/include/nifti/nifti_tool.h
d-shlibmove --commit \
	    --multiarch \
	    --devunversioned \
	    --exclude-la \
	    --override s/libznz[0-9.]*-dev/libznz-dev/ \
	    --movedev debian/tmp/usr/include/* usr/include \
	    debian/tmp/usr/lib/libnifti*.so
Library package automatic movement utility
 --> libznz-dev package from same source package.
 --> zlib1g-dev package exists.
set -e
install -d -m 755 debian/libnifti2-dev/usr/lib/x86_64-linux-gnu
install -d -m 755 debian/libnifti2-2/usr/lib/x86_64-linux-gnu
mv debian/tmp/usr/lib/libnifti2.a debian/libnifti2-dev/usr/lib/x86_64-linux-gnu
mv debian/tmp/usr/lib/libnifti2.so debian/libnifti2-dev/usr/lib/x86_64-linux-gnu
mv /<>/debian/tmp/usr/lib/libnifti2.so.2 debian/libnifti2-2/usr/lib/x86_64-linux-gnu
mv /<>/debian/tmp/usr/lib/libnifti2.so.2.1.0 debian/libnifti2-2/usr/lib/x86_64-linux-gnu
PKGDEV=libnifti2-dev
PKGSHL=libnifti2-2
install -d -m 755 debian/libnifti2-dev/usr/include
mv debian/tmp/usr/include/nifti debian/libnifti2-dev/usr/include
d-shlibmove --commit \
	    --multiarch \
	    --devunversioned \
	    --exclude-la \
	    --movedev debian/libnifti2-dev/usr/include/nifti/znzlib.h usr/include/nifti \
	    debian/tmp/usr/lib/libznz*.so
Library package automatic movement utility
 --> zlib1g-dev package exists.
set -e
install -d -m 755 debian/libznz-dev/usr/lib/x86_64-linux-gnu
install -d -m 755 debian/libznz3/usr/lib/x86_64-linux-gnu
mv debian/tmp/usr/lib/libznz.a debian/libznz-dev/usr/lib/x86_64-linux-gnu
mv debian/tmp/usr/lib/libznz.so debian/libznz-dev/usr/lib/x86_64-linux-gnu
mv /<>/debian/tmp/usr/lib/libznz.so.3 debian/libznz3/usr/lib/x86_64-linux-gnu
mv /<>/debian/tmp/usr/lib/libznz.so.3.0.0 debian/libznz3/usr/lib/x86_64-linux-gnu
PKGDEV=libznz-dev
PKGSHL=libznz3
install -d -m 755 debian/libznz-dev/usr/include/nifti
mv debian/libnifti2-dev/usr/include/nifti/znzlib.h debian/libznz-dev/usr/include/nifti
d-shlibmove --commit \
	    --multiarch \
	    --devunversioned \
	    --exclude-la \
	    --override s/libznz[0-9.]*-dev/libznz-dev/ \
	    --movedev debian/libnifti2-dev/usr/include/nifti/nifti1_io.h usr/include/nifti \
	    --movedev debian/libnifti2-dev/usr/include/nifti/nifti2_io.h usr/include/nifti \
	    debian/tmp/usr/lib/libniftiio*.so
Library package automatic movement utility
 --> libznz-dev package from same source package.
 --> zlib1g-dev package exists.
set -e
install -d -m 755 debian/libniftiio-dev/usr/lib/x86_64-linux-gnu
install -d -m 755 debian/libniftiio2/usr/lib/x86_64-linux-gnu
mv debian/tmp/usr/lib/libniftiio.a debian/libniftiio-dev/usr/lib/x86_64-linux-gnu
mv debian/tmp/usr/lib/libniftiio.so debian/libniftiio-dev/usr/lib/x86_64-linux-gnu
mv /<>/debian/tmp/usr/lib/libniftiio.so.2 debian/libniftiio2/usr/lib/x86_64-linux-gnu
mv /<>/debian/tmp/usr/lib/libniftiio.so.2.1.0 debian/libniftiio2/usr/lib/x86_64-linux-gnu
PKGDEV=libniftiio-dev
PKGSHL=libniftiio2
install -d -m 755 debian/libniftiio-dev/usr/include/nifti
mv debian/libnifti2-dev/usr/include/nifti/nifti1_io.h debian/libniftiio-dev/usr/include/nifti
install -d -m 755 debian/libniftiio-dev/usr/include/nifti
mv debian/libnifti2-dev/usr/include/nifti/nifti2_io.h debian/libniftiio-dev/usr/include/nifti
d-shlibmove --commit \
	    --multiarch \
	    --devunversioned \
	    --exclude-la \
	    --override s/libznz[0-9.]*-dev/libznz-dev/ \
	    --movedev debian/libnifti2-dev/usr/include/nifti/nifticdf.h usr/include/nifti \
	    debian/tmp/usr/lib/libnifticdf*.so
Library package automatic movement utility
devlibs error: There is no package matching [libniftiio2-dev] and noone provides it, please report bug to d-shlibs maintainer
 --> libznz-dev package from same source package.
 --> zlib1g-dev package exists.
make[1]: *** [debian/rules:71: override_dh_auto_install] Error 1
make[1]: Leaving directory '/<>'
make: *** [debian/rules:24: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2021-10-26T22:43:43Z

Finished
--------


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: amd64
Build Type: binary
Build-Space: 20312
Build-Time: 19
Distribution: unstable
Fail-Stage: build
Host Architecture: amd64
Install-Time: 23
Job: nifticlib_3.0.1-8
Machine Architecture: amd64
Package: nifticlib
Package-Time: 63
Source-Version: 3.0.1-8
Space: 20312
Status: attempted
Version: 3.0.1-8
--------------------------------------------------------------------------------
Finished at 2021-10-26T22:43:43Z
Build needed 00:01:03, 20312k disk space
E: Build failure (dpkg-buildpackage died)
DC-Status: Failed 63.961462236s