DC-Build-Header: plast 2.3.2+dfsg-7 / 2021-10-26 21:45:56 +0000 DC-Task: type:rebuild-binarch-only source:plast version:2.3.2+dfsg-7 chroot:unstable esttime:308 logfile:/tmp/plast_2.3.2+dfsg-7_unstable_clang13.log modes:clang13:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --no-run-lintian --chroot-setup-commands=/tmp/clang13 plast_2.3.2+dfsg-7' sbuild (Debian sbuild) 0.78.1 (09 February 2019) on ip-172-31-5-215.eu-central-1.compute.internal +==============================================================================+ | plast 2.3.2+dfsg-7 (amd64) Tue, 26 Oct 2021 21:45:56 +0000 | +==============================================================================+ Package: plast Version: 2.3.2+dfsg-7 Source Version: 2.3.2+dfsg-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-3f022f27-e4e2-4446-bc33-3a3713458719' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang13 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=13 + echo 'Install of clang-13' Install of clang-13 + apt-get update Get:1 http://127.0.0.1:12990/debian sid InRelease [165 kB] Get:2 http://127.0.0.1:12990/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://127.0.0.1:12990/debian sid/main Sources T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [47.3 kB] Get:4 http://127.0.0.1:12990/debian sid/main Sources T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [47.3 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 Packages T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [55.9 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 Packages T-2021-10-26-2004.40-F-2021-10-26-0202.15.pdiff [55.9 kB] Get:6 http://127.0.0.1:12990/debian sid/main Translation-en [6586 kB] Fetched 6981 kB in 3s (2765 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-13 libomp-13-dev libobjc-9-dev Reading package lists... Building dependency tree... The following additional packages will be installed: lib32gcc-s1 lib32stdc++6 libasan5 libbsd0 libc6-i386 libclang-common-13-dev libclang-cpp13 libclang1-13 libedit2 libgc1 libgcc-9-dev libicu67 libllvm13 libmd0 libobjc-11-dev libobjc4 libomp5-13 libxml2 libz3-4 Suggested packages: clang-13-doc libomp-13-doc Recommended packages: llvm-13-dev python3 The following NEW packages will be installed: clang-13 lib32gcc-s1 lib32stdc++6 libasan5 libbsd0 libc6-i386 libclang-common-13-dev libclang-cpp13 libclang1-13 libedit2 libgc1 libgcc-9-dev libicu67 libllvm13 libmd0 libobjc-11-dev libobjc-9-dev libobjc4 libomp-13-dev libomp5-13 libxml2 libz3-4 0 upgraded, 22 newly installed, 0 to remove and 0 not upgraded. Need to get 68.5 MB of archives. After this operation, 379 MB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 libmd0 amd64 1.0.4-1 [29.6 kB] Get:2 http://127.0.0.1:12990/debian sid/main amd64 libbsd0 amd64 0.11.3-1 [108 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libedit2 amd64 3.1-20210910-1 [97.5 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libxml2 amd64 2.9.12+dfsg-5 [696 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 libz3-4 amd64 4.8.12-1+b1 [6997 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 libllvm13 amd64 1:13.0.0-8 [19.7 MB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 libclang-cpp13 amd64 1:13.0.0-8 [10.5 MB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 libgc1 amd64 1:8.0.4-3 [239 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 libobjc4 amd64 11.2.0-10 [43.2 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 libobjc-11-dev amd64 11.2.0-10 [170 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 libc6-i386 amd64 2.32-4 [2624 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 lib32gcc-s1 amd64 11.2.0-10 [49.9 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 lib32stdc++6 amd64 11.2.0-10 [601 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 libclang-common-13-dev amd64 1:13.0.0-8 [5730 kB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 libclang1-13 amd64 1:13.0.0-8 [6093 kB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 clang-13 amd64 1:13.0.0-8 [119 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 libasan5 amd64 9.4.0-3 [2734 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libgcc-9-dev amd64 9.4.0-3 [2343 kB] Get:20 http://127.0.0.1:12990/debian sid/main amd64 libobjc-9-dev amd64 9.4.0-3 [219 kB] Get:21 http://127.0.0.1:12990/debian sid/main amd64 libomp5-13 amd64 1:13.0.0-8 [377 kB] Get:22 http://127.0.0.1:12990/debian sid/main amd64 libomp-13-dev amd64 1:13.0.0-8 [482 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 68.5 MB in 0s (149 MB/s) Selecting previously unselected package libmd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12431 files and directories currently installed.) Preparing to unpack .../00-libmd0_1.0.4-1_amd64.deb ... Unpacking libmd0:amd64 (1.0.4-1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../01-libbsd0_0.11.3-1_amd64.deb ... Unpacking libbsd0:amd64 (0.11.3-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../02-libedit2_3.1-20210910-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20210910-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../03-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../04-libxml2_2.9.12+dfsg-5_amd64.deb ... Unpacking libxml2:amd64 (2.9.12+dfsg-5) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../05-libz3-4_4.8.12-1+b1_amd64.deb ... Unpacking libz3-4:amd64 (4.8.12-1+b1) ... Selecting previously unselected package libllvm13:amd64. Preparing to unpack .../06-libllvm13_1%3a13.0.0-8_amd64.deb ... Unpacking libllvm13:amd64 (1:13.0.0-8) ... Selecting previously unselected package libclang-cpp13. Preparing to unpack .../07-libclang-cpp13_1%3a13.0.0-8_amd64.deb ... Unpacking libclang-cpp13 (1:13.0.0-8) ... Selecting previously unselected package libgc1:amd64. Preparing to unpack .../08-libgc1_1%3a8.0.4-3_amd64.deb ... Unpacking libgc1:amd64 (1:8.0.4-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../09-libobjc4_11.2.0-10_amd64.deb ... Unpacking libobjc4:amd64 (11.2.0-10) ... Selecting previously unselected package libobjc-11-dev:amd64. Preparing to unpack .../10-libobjc-11-dev_11.2.0-10_amd64.deb ... Unpacking libobjc-11-dev:amd64 (11.2.0-10) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../11-libc6-i386_2.32-4_amd64.deb ... Unpacking libc6-i386 (2.32-4) ... Selecting previously unselected package lib32gcc-s1. Preparing to unpack .../12-lib32gcc-s1_11.2.0-10_amd64.deb ... Unpacking lib32gcc-s1 (11.2.0-10) ... Selecting previously unselected package lib32stdc++6. Preparing to unpack .../13-lib32stdc++6_11.2.0-10_amd64.deb ... Unpacking lib32stdc++6 (11.2.0-10) ... Selecting previously unselected package libclang-common-13-dev. Preparing to unpack .../14-libclang-common-13-dev_1%3a13.0.0-8_amd64.deb ... Unpacking libclang-common-13-dev (1:13.0.0-8) ... Selecting previously unselected package libclang1-13. Preparing to unpack .../15-libclang1-13_1%3a13.0.0-8_amd64.deb ... Unpacking libclang1-13 (1:13.0.0-8) ... Selecting previously unselected package clang-13. Preparing to unpack .../16-clang-13_1%3a13.0.0-8_amd64.deb ... Unpacking clang-13 (1:13.0.0-8) ... Selecting previously unselected package libasan5:amd64. Preparing to unpack .../17-libasan5_9.4.0-3_amd64.deb ... Unpacking libasan5:amd64 (9.4.0-3) ... Selecting previously unselected package libgcc-9-dev:amd64. Preparing to unpack .../18-libgcc-9-dev_9.4.0-3_amd64.deb ... Unpacking libgcc-9-dev:amd64 (9.4.0-3) ... Selecting previously unselected package libobjc-9-dev:amd64. Preparing to unpack .../19-libobjc-9-dev_9.4.0-3_amd64.deb ... Unpacking libobjc-9-dev:amd64 (9.4.0-3) ... Selecting previously unselected package libomp5-13:amd64. Preparing to unpack .../20-libomp5-13_1%3a13.0.0-8_amd64.deb ... Unpacking libomp5-13:amd64 (1:13.0.0-8) ... Selecting previously unselected package libomp-13-dev. Preparing to unpack .../21-libomp-13-dev_1%3a13.0.0-8_amd64.deb ... Unpacking libomp-13-dev (1:13.0.0-8) ... Setting up libicu67:amd64 (67.1-7) ... Setting up libasan5:amd64 (9.4.0-3) ... Setting up libz3-4:amd64 (4.8.12-1+b1) ... Setting up libgc1:amd64 (1:8.0.4-3) ... Setting up libmd0:amd64 (1.0.4-1) ... Setting up libc6-i386 (2.32-4) ... Setting up libomp5-13:amd64 (1:13.0.0-8) ... Setting up libbsd0:amd64 (0.11.3-1) ... Setting up libxml2:amd64 (2.9.12+dfsg-5) ... Setting up libedit2:amd64 (3.1-20210910-1) ... Setting up libobjc4:amd64 (11.2.0-10) ... Setting up libgcc-9-dev:amd64 (9.4.0-3) ... Setting up lib32gcc-s1 (11.2.0-10) ... Setting up lib32stdc++6 (11.2.0-10) ... Setting up libllvm13:amd64 (1:13.0.0-8) ... Setting up libobjc-9-dev:amd64 (9.4.0-3) ... Setting up libclang-common-13-dev (1:13.0.0-8) ... Setting up libomp-13-dev (1:13.0.0-8) ... Setting up libobjc-11-dev:amd64 (11.2.0-10) ... Setting up libclang1-13 (1:13.0.0-8) ... Setting up libclang-cpp13 (1:13.0.0-8) ... Setting up clang-13 (1:13.0.0-8) ... Processing triggers for libc-bin (2.32-4) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8 9 10 11' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-13 g++-4.6 + ln -s clang-13 gcc-4.6 + ln -s clang-13 cpp-4.6 + ln -s clang-13 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-13 g++-4.7 + ln -s clang-13 gcc-4.7 + ln -s clang-13 cpp-4.7 + ln -s clang-13 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-13 g++-4.8 + ln -s clang-13 gcc-4.8 + ln -s clang-13 cpp-4.8 + ln -s clang-13 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-13 g++-4.9 + ln -s clang-13 gcc-4.9 + ln -s clang-13 cpp-4.9 + ln -s clang-13 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-13 g++-5 + ln -s clang-13 gcc-5 + ln -s clang-13 cpp-5 + ln -s clang-13 gcc + echo 'gcc-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-5 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-5 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-13 g++-6 + ln -s clang-13 gcc-6 + ln -s clang-13 cpp-6 + ln -s clang-13 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-13 g++-7 + ln -s clang-13 gcc-7 + ln -s clang-13 cpp-7 + ln -s clang-13 gcc + echo 'gcc-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-13 g++-8 + ln -s clang-13 gcc-8 + ln -s clang-13 cpp-8 + ln -s clang-13 gcc + echo 'gcc-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-9 gcc-9 cpp-9 gcc + ln -s clang++-13 g++-9 + ln -s clang-13 gcc-9 + ln -s clang-13 cpp-9 + ln -s clang-13 gcc + echo 'gcc-9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-10 gcc-10 cpp-10 gcc + ln -s clang++-13 g++-10 + ln -s clang-13 gcc-10 + ln -s clang-13 cpp-10 + ln -s clang-13 gcc + echo 'gcc-10 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-10 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-10 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-10 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-11 gcc-11 cpp-11 gcc + ln -s clang++-13 g++-11 + ln -s clang-13 gcc-11 + ln -s clang-13 cpp-11 + ln -s clang-13 gcc + echo 'gcc-11 hold' + dpkg --set-selections + echo 'g++-11 hold' + dpkg --set-selections + cd - /build/plast-kjrrU2 + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + gcc --version + grep clang + cpp --version + grep clang + g++ --version + grep clang + cd /usr/bin/ + rm -f clang++ clang + ln -s clang-13 clang++ + ln -s clang-13 clang + clang++ --version Debian clang version 13.0.0-8 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + clang --version Debian clang version 13.0.0-8 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin + cd - /build/plast-kjrrU2 + apt install --yes --no-install-recommends --force-yes qt5-qmake WARNING: apt does not have a stable CLI interface. Use with caution in scripts. Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: qt5-qmake-bin qtchooser The following NEW packages will be installed: qt5-qmake qt5-qmake-bin qtchooser 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 1322 kB of archives. After this operation, 4914 kB of additional disk space will be used. Get:1 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake-bin amd64 5.15.2+dfsg-12 [1046 kB] Get:2 http://127.0.0.1:12990/debian sid/main amd64 qtchooser amd64 66-2 [26.3 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 qt5-qmake amd64 5.15.2+dfsg-12 [249 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1322 kB in 0s (57.6 MB/s) Selecting previously unselected package qt5-qmake-bin. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13528 files and directories currently installed.) Preparing to unpack .../qt5-qmake-bin_5.15.2+dfsg-12_amd64.deb ... Unpacking qt5-qmake-bin (5.15.2+dfsg-12) ... Selecting previously unselected package qtchooser. Preparing to unpack .../qtchooser_66-2_amd64.deb ... Unpacking qtchooser (66-2) ... Selecting previously unselected package qt5-qmake:amd64. Preparing to unpack .../qt5-qmake_5.15.2+dfsg-12_amd64.deb ... Unpacking qt5-qmake:amd64 (5.15.2+dfsg-12) ... Setting up qt5-qmake-bin (5.15.2+dfsg-12) ... Setting up qtchooser (66-2) ... Setting up qt5-qmake:amd64 (5.15.2+dfsg-12) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + cp /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qmake.conf /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/qplatformdefs.h /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ + ls -al /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/ total 16 drwxr-xr-x 2 root root 4096 Oct 26 21:46 . drwxr-xr-x 76 root root 4096 Oct 26 21:46 .. -rw-r--r-- 1 root root 276 Oct 26 21:46 qmake.conf -rw-r--r-- 1 root root 3218 Oct 26 21:46 qplatformdefs.h + cat /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/qmake.conf # # qmake configuration for linux-clang # MAKEFILE_GENERATOR = UNIX CONFIG += incremental QMAKE_INCREMENTAL_STYLE = sublib include(../common/linux.conf) include(../common/gcc-base-unix.conf) include(../common/clang.conf) QMAKE_LFLAGS += -ccc-gcc-name g++ load(qt_config) + export QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + QMAKESPEC=/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-clang/ + sed -i -e 's|compare_problem(2,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + sed -i -e 's|compare_problem(1,|compare_problem(0,|g' /usr/bin/dpkg-gensymbols + grep 'compare_problem(' /usr/bin/dpkg-gensymbols compare_problem(4, g_('new libraries appeared in the symbols file: %s'), "@libs"); compare_problem(3, g_('some libraries disappeared in the symbols file: %s'), "@libs"); compare_problem(0, g_('some new symbols appeared in the symbols file: %s'), compare_problem(0, g_('some symbols or patterns disappeared in the symbols file: %s'), I: Finished running '/tmp/clang13'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/plast-kjrrU2/resolver-7cVqxJ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:12990/debian sid InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'plast' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/plast.git Please use: git clone https://salsa.debian.org/med-team/plast.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5749 kB of source archives. Get:1 http://127.0.0.1:12990/debian sid/main plast 2.3.2+dfsg-7 (dsc) [2043 B] Get:2 http://127.0.0.1:12990/debian sid/main plast 2.3.2+dfsg-7 (tar) [5726 kB] Get:3 http://127.0.0.1:12990/debian sid/main plast 2.3.2+dfsg-7 (diff) [20.1 kB] Fetched 5749 kB in 0s (55.4 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/plast-kjrrU2/plast-2.3.2+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/plast-kjrrU2' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, libpcre3-dev, default-jdk, libsimde-dev, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), cmake, libpcre3-dev, default-jdk, libsimde-dev, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [396 B] Get:5 copy:/<>/apt_archive ./ Packages [481 B] Fetched 1834 B in 0s (182 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates ca-certificates-java cmake cmake-data debhelper default-jdk default-jdk-headless default-jre default-jre-headless dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dwz emacsen-common file fontconfig-config fonts-dejavu-core gettext gettext-base groff-base intltool-debian java-common libarchive-zip-perl libarchive13 libasound2 libasound2-data libavahi-client3 libavahi-common-data libavahi-common3 libbrotli1 libcups2 libcurl4 libdbus-1-3 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libharfbuzz0b libjpeg62-turbo libjsoncpp24 liblcms2-2 libldap-2.4-2 libllvm12 libmagic-mgc libmagic1 libncurses6 libncursesw6 libnghttp2-14 libnspr4 libnss3 libpciaccess0 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpcsclite1 libpipeline1 libpng16-16 libprocps8 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsimde-dev libsqlite3-0 libssh2-1 libsub-override-perl libtool libuchardet0 libuv1 libvulkan1 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxfixes3 libxi6 libxrender1 libxshmfence1 libxtst6 libxxf86vm1 m4 man-db openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre openjdk-11-jre-headless openssl po-debconf procps sensible-utils ucf x11-common Suggested packages: autoconf-archive gnu-standards autoconf-doc cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libasound2-plugins alsa-utils cups-common liblcms2-utils pciutils pcscd lm-sensors libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser openjdk-11-demo openjdk-11-source visualvm libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic libmail-box-perl Recommended packages: curl | wget | lynx alsa-ucm-conf alsa-topology-conf dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libldap-common libgpm2 publicsuffix libsasl2-modules libltdl-dev mesa-vulkan-drivers | vulkan-icd libxt-dev libatk-wrapper-java-jni fonts-dejavu-extra libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates ca-certificates-java cmake cmake-data debhelper default-jdk default-jdk-headless default-jre default-jre-headless dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dwz emacsen-common file fontconfig-config fonts-dejavu-core gettext gettext-base groff-base intltool-debian java-common libarchive-zip-perl libarchive13 libasound2 libasound2-data libavahi-client3 libavahi-common-data libavahi-common3 libbrotli1 libcups2 libcurl4 libdbus-1-3 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libharfbuzz0b libjpeg62-turbo libjsoncpp24 liblcms2-2 libldap-2.4-2 libllvm12 libmagic-mgc libmagic1 libncurses6 libncursesw6 libnghttp2-14 libnspr4 libnss3 libpciaccess0 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpcsclite1 libpipeline1 libpng16-16 libprocps8 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsimde-dev libsqlite3-0 libssh2-1 libsub-override-perl libtool libuchardet0 libuv1 libvulkan1 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxfixes3 libxi6 libxrender1 libxshmfence1 libxtst6 libxxf86vm1 m4 man-db openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre openjdk-11-jre-headless openssl po-debconf procps sbuild-build-depends-main-dummy sensible-utils ucf x11-common 0 upgraded, 130 newly installed, 0 to remove and 0 not upgraded. Need to get 329 MB of archives. After this operation, 664 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [904 B] Get:2 http://127.0.0.1:12990/debian sid/main amd64 bsdextrautils amd64 2.37.2-4 [143 kB] Get:3 http://127.0.0.1:12990/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://127.0.0.1:12990/debian sid/main amd64 groff-base amd64 1.22.4-7 [935 kB] Get:5 http://127.0.0.1:12990/debian sid/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://127.0.0.1:12990/debian sid/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://127.0.0.1:12990/debian sid/main amd64 libncurses6 amd64 6.2+20210905-1 [102 kB] Get:8 http://127.0.0.1:12990/debian sid/main amd64 libncursesw6 amd64 6.2+20210905-1 [133 kB] Get:9 http://127.0.0.1:12990/debian sid/main amd64 libprocps8 amd64 2:3.3.17-5 [63.9 kB] Get:10 http://127.0.0.1:12990/debian sid/main amd64 procps amd64 2:3.3.17-5 [502 kB] Get:11 http://127.0.0.1:12990/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:12 http://127.0.0.1:12990/debian sid/main amd64 openssl amd64 1.1.1l-1 [851 kB] Get:13 http://127.0.0.1:12990/debian sid/main amd64 ca-certificates all 20211016 [156 kB] Get:14 http://127.0.0.1:12990/debian sid/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:15 http://127.0.0.1:12990/debian sid/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:16 http://127.0.0.1:12990/debian sid/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:17 http://127.0.0.1:12990/debian sid/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:18 http://127.0.0.1:12990/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:19 http://127.0.0.1:12990/debian sid/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:20 http://127.0.0.1:12990/debian sid/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:21 http://127.0.0.1:12990/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:22 http://127.0.0.1:12990/debian sid/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:23 http://127.0.0.1:12990/debian sid/main amd64 automake all 1:1.16.5-1 [823 kB] Get:24 http://127.0.0.1:12990/debian sid/main amd64 autopoint all 0.21-4 [510 kB] Get:25 http://127.0.0.1:12990/debian sid/main amd64 java-common all 0.72 [14.5 kB] Get:26 http://127.0.0.1:12990/debian sid/main amd64 libavahi-common-data amd64 0.8-5 [124 kB] Get:27 http://127.0.0.1:12990/debian sid/main amd64 libavahi-common3 amd64 0.8-5 [58.4 kB] Get:28 http://127.0.0.1:12990/debian sid/main amd64 libdbus-1-3 amd64 1.12.20-3 [219 kB] Get:29 http://127.0.0.1:12990/debian sid/main amd64 libavahi-client3 amd64 0.8-5 [62.1 kB] Get:30 http://127.0.0.1:12990/debian sid/main amd64 libcups2 amd64 2.3.3op2-7 [349 kB] Get:31 http://127.0.0.1:12990/debian sid/main amd64 liblcms2-2 amd64 2.12~rc1-2 [150 kB] Get:32 http://127.0.0.1:12990/debian sid/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get:33 http://127.0.0.1:12990/debian sid/main amd64 libexpat1 amd64 2.4.1-3 [104 kB] Get:34 http://127.0.0.1:12990/debian sid/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get:35 http://127.0.0.1:12990/debian sid/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get:36 http://127.0.0.1:12990/debian sid/main amd64 libfreetype6 amd64 2.11.0+dfsg-1 [453 kB] Get:37 http://127.0.0.1:12990/debian sid/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:38 http://127.0.0.1:12990/debian sid/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get:39 http://127.0.0.1:12990/debian sid/main amd64 libfontconfig1 amd64 2.13.1-4.2 [347 kB] Get:40 http://127.0.0.1:12990/debian sid/main amd64 libnspr4 amd64 2:4.32-1 [112 kB] Get:41 http://127.0.0.1:12990/debian sid/main amd64 libsqlite3-0 amd64 3.36.0-2 [815 kB] Get:42 http://127.0.0.1:12990/debian sid/main amd64 libnss3 amd64 2:3.70-1 [1319 kB] Get:43 http://127.0.0.1:12990/debian sid/main amd64 libasound2-data all 1.2.5.1-1 [38.6 kB] Get:44 http://127.0.0.1:12990/debian sid/main amd64 libasound2 amd64 1.2.5.1-1 [373 kB] Get:45 http://127.0.0.1:12990/debian sid/main amd64 libglib2.0-0 amd64 2.70.0-3 [1401 kB] Get:46 http://127.0.0.1:12990/debian sid/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:47 http://127.0.0.1:12990/debian sid/main amd64 libharfbuzz0b amd64 2.7.4-1 [1471 kB] Get:48 http://127.0.0.1:12990/debian sid/main amd64 libpcsclite1 amd64 1.9.4-1 [60.0 kB] Get:49 http://127.0.0.1:12990/debian sid/main amd64 openjdk-11-jre-headless amd64 11.0.13+8-1 [37.3 MB] Get:50 http://127.0.0.1:12990/debian sid/main amd64 default-jre-headless amd64 2:1.11-72 [10.9 kB] Get:51 http://127.0.0.1:12990/debian sid/main amd64 ca-certificates-java all 20190909 [15.7 kB] Get:52 http://127.0.0.1:12990/debian sid/main amd64 libarchive13 amd64 3.4.3-2+b1 [343 kB] Get:53 http://127.0.0.1:12990/debian sid/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1 [69.1 kB] Get:54 http://127.0.0.1:12990/debian sid/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1 [106 kB] Get:55 http://127.0.0.1:12990/debian sid/main amd64 libldap-2.4-2 amd64 2.4.59+dfsg-1 [232 kB] Get:56 http://127.0.0.1:12990/debian sid/main amd64 libnghttp2-14 amd64 1.43.0-1 [77.1 kB] Get:57 http://127.0.0.1:12990/debian sid/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:58 http://127.0.0.1:12990/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:59 http://127.0.0.1:12990/debian sid/main amd64 libssh2-1 amd64 1.10.0-2 [178 kB] Get:60 http://127.0.0.1:12990/debian sid/main amd64 libcurl4 amd64 7.74.0-1.3+b1 [341 kB] Get:61 http://127.0.0.1:12990/debian sid/main amd64 libjsoncpp24 amd64 1.9.4-5 [78.8 kB] Get:62 http://127.0.0.1:12990/debian sid/main amd64 librhash0 amd64 1.4.2-1 [129 kB] Get:63 http://127.0.0.1:12990/debian sid/main amd64 libuv1 amd64 1.42.0-1 [135 kB] Get:64 http://127.0.0.1:12990/debian sid/main amd64 dh-elpa-helper all 2.0.9 [11.2 kB] Get:65 http://127.0.0.1:12990/debian sid/main amd64 emacsen-common all 3.0.4 [19.3 kB] Get:66 http://127.0.0.1:12990/debian sid/main amd64 cmake-data all 3.21.3-5 [1878 kB] Get:67 http://127.0.0.1:12990/debian sid/main amd64 cmake amd64 3.21.3-5 [7907 kB] Get:68 http://127.0.0.1:12990/debian sid/main amd64 libdebhelper-perl all 13.5.2 [192 kB] Get:69 http://127.0.0.1:12990/debian sid/main amd64 libtool all 2.4.6-15 [513 kB] Get:70 http://127.0.0.1:12990/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:71 http://127.0.0.1:12990/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:72 http://127.0.0.1:12990/debian sid/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:73 http://127.0.0.1:12990/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.12.0-2 [26.3 kB] Get:74 http://127.0.0.1:12990/debian sid/main amd64 dh-strip-nondeterminism all 1.12.0-2 [15.5 kB] Get:75 http://127.0.0.1:12990/debian sid/main amd64 libelf1 amd64 0.185-2 [172 kB] Get:76 http://127.0.0.1:12990/debian sid/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:77 http://127.0.0.1:12990/debian sid/main amd64 gettext amd64 0.21-4 [1311 kB] Get:78 http://127.0.0.1:12990/debian sid/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:79 http://127.0.0.1:12990/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:80 http://127.0.0.1:12990/debian sid/main amd64 debhelper all 13.5.2 [1056 kB] Get:81 http://127.0.0.1:12990/debian sid/main amd64 libglvnd0 amd64 1.3.4-2+b1 [51.7 kB] Get:82 http://127.0.0.1:12990/debian sid/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:83 http://127.0.0.1:12990/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:84 http://127.0.0.1:12990/debian sid/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get:85 http://127.0.0.1:12990/debian sid/main amd64 libx11-data all 2:1.7.2-2 [311 kB] Get:86 http://127.0.0.1:12990/debian sid/main amd64 libx11-6 amd64 2:1.7.2-2+b1 [772 kB] Get:87 http://127.0.0.1:12990/debian sid/main amd64 libdrm-common all 2.4.107-8 [15.3 kB] Get:88 http://127.0.0.1:12990/debian sid/main amd64 libdrm2 amd64 2.4.107-8 [44.0 kB] Get:89 http://127.0.0.1:12990/debian sid/main amd64 libglapi-mesa amd64 21.2.4-1 [74.9 kB] Get:90 http://127.0.0.1:12990/debian sid/main amd64 libx11-xcb1 amd64 2:1.7.2-2+b1 [203 kB] Get:91 http://127.0.0.1:12990/debian sid/main amd64 libxcb-dri2-0 amd64 1.14-3 [103 kB] Get:92 http://127.0.0.1:12990/debian sid/main amd64 libxcb-dri3-0 amd64 1.14-3 [102 kB] Get:93 http://127.0.0.1:12990/debian sid/main amd64 libxcb-glx0 amd64 1.14-3 [118 kB] Get:94 http://127.0.0.1:12990/debian sid/main amd64 libxcb-present0 amd64 1.14-3 [101 kB] Get:95 http://127.0.0.1:12990/debian sid/main amd64 libxcb-shm0 amd64 1.14-3 [101 kB] Get:96 http://127.0.0.1:12990/debian sid/main amd64 libxcb-sync1 amd64 1.14-3 [105 kB] Get:97 http://127.0.0.1:12990/debian sid/main amd64 libxcb-xfixes0 amd64 1.14-3 [105 kB] Get:98 http://127.0.0.1:12990/debian sid/main amd64 libxext6 amd64 2:1.3.4-1 [53.1 kB] Get:99 http://127.0.0.1:12990/debian sid/main amd64 libxfixes3 amd64 1:5.0.3-2 [22.1 kB] Get:100 http://127.0.0.1:12990/debian sid/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get:101 http://127.0.0.1:12990/debian sid/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:102 http://127.0.0.1:12990/debian sid/main amd64 libdrm-amdgpu1 amd64 2.4.107-8 [29.0 kB] Get:103 http://127.0.0.1:12990/debian sid/main amd64 libpciaccess0 amd64 0.16-1 [53.6 kB] Get:104 http://127.0.0.1:12990/debian sid/main amd64 libdrm-intel1 amd64 2.4.107-8 [72.5 kB] Get:105 http://127.0.0.1:12990/debian sid/main amd64 libdrm-nouveau2 amd64 2.4.107-8 [27.3 kB] Get:106 http://127.0.0.1:12990/debian sid/main amd64 libdrm-radeon1 amd64 2.4.107-8 [30.6 kB] Get:107 http://127.0.0.1:12990/debian sid/main amd64 libllvm12 amd64 1:12.0.1-15 [19.4 MB] Get:108 http://127.0.0.1:12990/debian sid/main amd64 libsensors-config all 1:3.6.0-7 [32.3 kB] Get:109 http://127.0.0.1:12990/debian sid/main amd64 libsensors5 amd64 1:3.6.0-7 [52.3 kB] Get:110 http://127.0.0.1:12990/debian sid/main amd64 libvulkan1 amd64 1.2.189.0-2 [104 kB] Get:111 http://127.0.0.1:12990/debian sid/main amd64 libgl1-mesa-dri amd64 21.2.4-1 [10.3 MB] Get:112 http://127.0.0.1:12990/debian sid/main amd64 libglx-mesa0 amd64 21.2.4-1 [184 kB] Get:113 http://127.0.0.1:12990/debian sid/main amd64 libglx0 amd64 1.3.4-2+b1 [36.5 kB] Get:114 http://127.0.0.1:12990/debian sid/main amd64 libgl1 amd64 1.3.4-2+b1 [89.6 kB] Get:115 http://127.0.0.1:12990/debian sid/main amd64 libgif7 amd64 5.1.9-2 [45.1 kB] Get:116 http://127.0.0.1:12990/debian sid/main amd64 libxi6 amd64 2:1.8-1 [84.0 kB] Get:117 http://127.0.0.1:12990/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:118 http://127.0.0.1:12990/debian sid/main amd64 x11-common all 1:7.7+23 [252 kB] Get:119 http://127.0.0.1:12990/debian sid/main amd64 libxtst6 amd64 2:1.2.3-1 [27.8 kB] Get:120 http://127.0.0.1:12990/debian sid/main amd64 openjdk-11-jre amd64 11.0.13+8-1 [176 kB] Get:121 http://127.0.0.1:12990/debian sid/main amd64 default-jre amd64 2:1.11-72 [1044 B] Get:122 http://127.0.0.1:12990/debian sid/main amd64 openjdk-11-jdk-headless amd64 11.0.13+8-1 [217 MB] Get:123 http://127.0.0.1:12990/debian sid/main amd64 default-jdk-headless amd64 2:1.11-72 [1100 B] Get:124 http://127.0.0.1:12990/debian sid/main amd64 openjdk-11-jdk amd64 11.0.13+8-1 [7209 kB] Get:125 http://127.0.0.1:12990/debian sid/main amd64 default-jdk amd64 2:1.11-72 [1056 B] Get:126 http://127.0.0.1:12990/debian sid/main amd64 libpcre16-3 amd64 2:8.39-13 [259 kB] Get:127 http://127.0.0.1:12990/debian sid/main amd64 libpcre32-3 amd64 2:8.39-13 [250 kB] Get:128 http://127.0.0.1:12990/debian sid/main amd64 libpcrecpp0v5 amd64 2:8.39-13 [152 kB] Get:129 http://127.0.0.1:12990/debian sid/main amd64 libpcre3-dev amd64 2:8.39-13 [650 kB] Get:130 http://127.0.0.1:12990/debian sid/main amd64 libsimde-dev all 0.7.2-5 [259 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 329 MB in 3s (130 MB/s) Selecting previously unselected package bsdextrautils. 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Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../101-libpciaccess0_0.16-1_amd64.deb ... Unpacking libpciaccess0:amd64 (0.16-1) ... Selecting previously unselected package libdrm-intel1:amd64. Preparing to unpack .../102-libdrm-intel1_2.4.107-8_amd64.deb ... Unpacking libdrm-intel1:amd64 (2.4.107-8) ... Selecting previously unselected package libdrm-nouveau2:amd64. Preparing to unpack .../103-libdrm-nouveau2_2.4.107-8_amd64.deb ... Unpacking libdrm-nouveau2:amd64 (2.4.107-8) ... Selecting previously unselected package libdrm-radeon1:amd64. Preparing to unpack .../104-libdrm-radeon1_2.4.107-8_amd64.deb ... Unpacking libdrm-radeon1:amd64 (2.4.107-8) ... Selecting previously unselected package libllvm12:amd64. Preparing to unpack .../105-libllvm12_1%3a12.0.1-15_amd64.deb ... Unpacking libllvm12:amd64 (1:12.0.1-15) ... Selecting previously unselected package libsensors-config. Preparing to unpack .../106-libsensors-config_1%3a3.6.0-7_all.deb ... 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Unpacking libgl1:amd64 (1.3.4-2+b1) ... Selecting previously unselected package libgif7:amd64. Preparing to unpack .../113-libgif7_5.1.9-2_amd64.deb ... Unpacking libgif7:amd64 (5.1.9-2) ... Selecting previously unselected package libxi6:amd64. Preparing to unpack .../114-libxi6_2%3a1.8-1_amd64.deb ... Unpacking libxi6:amd64 (2:1.8-1) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../115-libxrender1_1%3a0.9.10-1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../116-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package libxtst6:amd64. Preparing to unpack .../117-libxtst6_2%3a1.2.3-1_amd64.deb ... Unpacking libxtst6:amd64 (2:1.2.3-1) ... Selecting previously unselected package openjdk-11-jre:amd64. Preparing to unpack .../118-openjdk-11-jre_11.0.13+8-1_amd64.deb ... 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Setting up libexpat1:amd64 (2.4.1-3) ... Setting up libpcrecpp0v5:amd64 (2:8.39-13) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up libgraphite2-3:amd64 (1.3.14-1) ... Setting up libsimde-dev (0.7.2-5) ... Setting up liblcms2-2:amd64 (2.12~rc1-2) ... Setting up libpciaccess0:amd64 (0.16-1) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libpsl5:amd64 (0.21.0-1.2) ... Setting up libxcb1:amd64 (1.14-3) ... Setting up libxcb-xfixes0:amd64 (1.14-3) ... Setting up bsdextrautils (2.37.2-4) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libpcre16-3:amd64 (2:8.39-13) ... Setting up java-common (0.72) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive13:amd64 (3.4.3-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.70.0-3) ... No schema files found: doing nothing. Setting up libglvnd0:amd64 (1.3.4-2+b1) ... Setting up libxcb-glx0:amd64 (1.14-3) ... Setting up libdebhelper-perl (13.5.2) ... Setting up libbrotli1:amd64 (1.0.9-2+b2) ... Setting up libsqlite3-0:amd64 (3.36.0-2) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of restart. Setting up libsensors-config (1:3.6.0-7) ... Setting up libnghttp2-14:amd64 (1.43.0-1) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up libxcb-shm0:amd64 (1.14-3) ... Setting up file (1:5.39-3) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1) ... Setting up libxcb-present0:amd64 (1.14-3) ... Setting up libasound2-data (1.2.5.1-1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libuv1:amd64 (1.42.0-1) ... Setting up libjpeg62-turbo:amd64 (1:2.0.6-4) ... Setting up emacsen-common (3.0.4) ... Setting up libx11-data (2:1.7.2-2) ... Setting up libnspr4:amd64 (2:4.32-1) ... Setting up libxcb-sync1:amd64 (1.14-3) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up dh-elpa-helper (2.0.9) ... Setting up libavahi-common-data:amd64 (0.8-5) ... Setting up libllvm12:amd64 (1:12.0.1-15) ... Setting up libncurses6:amd64 (6.2+20210905-1) ... Setting up libdbus-1-3:amd64 (1.12.20-3) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up libpng16-16:amd64 (1.6.37-3) ... Setting up libpcre32-3:amd64 (2:8.39-13) ... Setting up autopoint (0.21-4) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libpcsclite1:amd64 (1.9.4-1) ... Setting up libsensors5:amd64 (1:3.6.0-7) ... Setting up libncursesw6:amd64 (6.2+20210905-1) ... Setting up libglapi-mesa:amd64 (21.2.4-1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2.1) ... Setting up libvulkan1:amd64 (1.2.189.0-2) ... Setting up libjsoncpp24:amd64 (1.9.4-5) ... Setting up libxcb-dri2-0:amd64 (1.14-3) ... Setting up libgif7:amd64 (5.1.9-2) ... Setting up sensible-utils (0.0.17) ... Setting up libxshmfence1:amd64 (1.3-1) ... Setting up librhash0:amd64 (1.4.2-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libasound2:amd64 (1.2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libx11-6:amd64 (2:1.7.2-2+b1) ... Setting up libssh2-1:amd64 (1.10.0-2) ... Setting up cmake-data (3.21.3-5) ... Setting up openssl (1.1.1l-1) ... Setting up libdrm-common (2.4.107-8) ... Setting up libelf1:amd64 (0.185-2) ... Setting up libprocps8:amd64 (2:3.3.17-5) ... Setting up libfile-stripnondeterminism-perl (1.12.0-2) ... Setting up libxcb-dri3-0:amd64 (1.14-3) ... Setting up libx11-xcb1:amd64 (2:1.7.2-2+b1) ... Setting up gettext (0.21-4) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libtool (2.4.6-15) ... Setting up libpcre3-dev:amd64 (2:8.39-13) ... Setting up libavahi-common3:amd64 (0.8-5) ... Setting up libxext6:amd64 (2:1.3.4-1) ... Setting up libldap-2.4-2:amd64 (2.4.59+dfsg-1) ... Setting up m4 (1.4.18-5) ... Setting up libnss3:amd64 (2:3.70-1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libfreetype6:amd64 (2.11.0+dfsg-1) ... Setting up libxfixes3:amd64 (1:5.0.3-2) ... Setting up ucf (3.0043) ... Setting up autoconf (2.71-2) ... Setting up dh-strip-nondeterminism (1.12.0-2) ... Setting up libdrm2:amd64 (2.4.107-8) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-7) ... Setting up procps (2:3.3.17-5) ... Setting up libcurl4:amd64 (7.74.0-1.3+b1) ... Setting up libharfbuzz0b:amd64 (2.7.4-1) ... Setting up libavahi-client3:amd64 (0.8-5) ... Setting up libdrm-amdgpu1:amd64 (2.4.107-8) ... Setting up automake (1:1.16.5-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libdrm-nouveau2:amd64 (2.4.107-8) ... Setting up libxi6:amd64 (2:1.8-1) ... Setting up libdrm-radeon1:amd64 (2.4.107-8) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up libxtst6:amd64 (2:1.2.3-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libdrm-intel1:amd64 (2.4.107-8) ... Setting up libgl1-mesa-dri:amd64 (21.2.4-1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up libcups2:amd64 (2.3.3op2-7) ... Setting up cmake (3.21.3-5) ... Setting up libfontconfig1:amd64 (2.13.1-4.2) ... Setting up libglx-mesa0:amd64 (21.2.4-1) ... Setting up libglx0:amd64 (1.3.4-2+b1) ... Setting up debhelper (13.5.2) ... Setting up libgl1:amd64 (1.3.4-2+b1) ... Setting up ca-certificates-java (20190909) ... head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. Adding debian:Comodo_AAA_Services_root.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:GTS_Root_R1.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:ACCVRAIZ1.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:AffirmTrust_Premium.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:EC-ACC.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:TrustCor_ECA-1.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:Certigna.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:SecureSign_RootCA11.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:ISRG_Root_X1.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:GTS_Root_R2.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:Secure_Global_CA.pem Adding debian:Certigna_Root_CA.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:SecureTrust_CA.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Izenpe.com.pem Adding debian:GTS_Root_R3.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:AffirmTrust_Commercial.pem done. Setting up default-jre-headless (2:1.11-72) ... Processing triggers for libc-bin (2.32-4) ... Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. Setting up openjdk-11-jre-headless:amd64 (11.0.13+8-1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. Setting up openjdk-11-jre:amd64 (11.0.13+8-1) ... Setting up openjdk-11-jdk-headless:amd64 (11.0.13+8-1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jaotc to provide /usr/bin/jaotc (jaotc) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre (2:1.11-72) ... Setting up default-jdk-headless (2:1.11-72) ... Setting up openjdk-11-jdk:amd64 (11.0.13+8-1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up default-jdk (2:1.11-72) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-cloud-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.37-7 dpkg-dev_1.20.9 g++-11_11.2.0-10 gcc-11_11.2.0-10 libc6-dev_2.32-4 libstdc++-11-dev_11.2.0-10 libstdc++6_11.2.0-10 linux-libc-dev_5.14.12-1 Package versions: adduser_3.118 apt_2.3.11 autoconf_2.71-2 automake_1:1.16.5-1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.52 bash_5.1-3+b2 binutils_2.37-7 binutils-common_2.37-7 binutils-x86-64-linux-gnu_2.37-7 bsdextrautils_2.37.2-4 bsdutils_1:2.37.2-4 build-essential_12.9 bzip2_1.0.8-4 ca-certificates_20211016 ca-certificates-java_20190909 clang-13_1:13.0.0-8 cmake_3.21.3-5 cmake-data_3.21.3-5 coreutils_8.32-4+b1 cpp_4:11.2.0-2 cpp-11_11.2.0-10 dash_0.5.11+git20210120+802ebd4-2 debconf_1.5.78 debhelper_13.5.2 debian-archive-keyring_2021.1.1 debianutils_5.5-1 default-jdk_2:1.11-72 default-jdk-headless_2:1.11-72 default-jre_2:1.11-72 default-jre-headless_2:1.11-72 dh-autoreconf_20 dh-elpa-helper_2.0.9 dh-strip-nondeterminism_1.12.0-2 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.4-1 emacsen-common_3.0.4 fakeroot_1.26-1 file_1:5.39-3 findutils_4.8.0-1 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 g++_4:11.2.0-2 g++-11_11.2.0-10 gcc_4:11.2.0-2 gcc-10-base_10.3.0-11 gcc-11_11.2.0-10 gcc-11-base_11.2.0-10 gcc-9-base_9.4.0-3 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 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libdpkg-perl_1.20.9 libdrm-amdgpu1_2.4.107-8 libdrm-common_2.4.107-8 libdrm-intel1_2.4.107-8 libdrm-nouveau2_2.4.107-8 libdrm-radeon1_2.4.107-8 libdrm2_2.4.107-8 libedit2_3.1-20210910-1 libelf1_0.185-2 libexpat1_2.4.1-3 libext2fs2_1.46.4-1 libfakeroot_1.26-1 libffi8_3.4.2-3 libfile-stripnondeterminism-perl_1.12.0-2 libfontconfig1_2.13.1-4.2 libfreetype6_2.11.0+dfsg-1 libgc1_1:8.0.4-3 libgcc-11-dev_11.2.0-10 libgcc-9-dev_9.4.0-3 libgcc-s1_11.2.0-10 libgcrypt20_1.9.4-3+b1 libgdbm-compat4_1.22-1 libgdbm6_1.22-1 libgif7_5.1.9-2 libgl1_1.3.4-2+b1 libgl1-mesa-dri_21.2.4-1 libglapi-mesa_21.2.4-1 libglib2.0-0_2.70.0-3 libglvnd0_1.3.4-2+b1 libglx-mesa0_21.2.4-1 libglx0_1.3.4-2+b1 libgmp10_2:6.2.1+dfsg-2 libgnutls30_3.7.2-2 libgomp1_11.2.0-10 libgpg-error0_1.42-3 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.18.3-7 libharfbuzz0b_2.7.4-1 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.24-2 libitm1_11.2.0-10 libjpeg62-turbo_1:2.0.6-4 libjsoncpp24_1.9.4-5 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 liblcms2-2_2.12~rc1-2 libldap-2.4-2_2.4.59+dfsg-1 libllvm12_1:12.0.1-15 libllvm13_1:13.0.0-8 liblsan0_11.2.0-10 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmd0_1.0.4-1 libmount1_2.37.2-4 libmpc3_1.2.1-1 libmpfr6_4.1.0-3 libncurses6_6.2+20210905-1 libncursesw6_6.2+20210905-1 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnspr4_2:4.32-1 libnss3_2:3.70-1 libobjc-11-dev_11.2.0-10 libobjc-9-dev_9.4.0-3 libobjc4_11.2.0-10 libomp-13-dev_1:13.0.0-8 libomp5-13_1:13.0.0-8 libp11-kit0_0.24.0-5 libpam-modules_1.4.0-10 libpam-modules-bin_1.4.0-10 libpam-runtime_1.4.0-10 libpam0g_1.4.0-10 libpciaccess0_0.16-1 libpcre16-3_2:8.39-13 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libpcre3-dev_2:8.39-13 libpcre32-3_2:8.39-13 libpcrecpp0v5_2:8.39-13 libpcsclite1_1.9.4-1 libperl5.32_5.32.1-6 libpipeline1_1.5.3-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.17-5 libpsl5_0.21.0-1.2 libquadmath0_11.2.0-10 librhash0_1.4.2-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2.1 libsasl2-modules-db_2.1.27+dfsg-2.1 libseccomp2_2.5.2-2 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b2 libsensors-config_1:3.6.0-7 libsensors5_1:3.6.0-7 libsepol1_3.1-1 libsigsegv2_2.13-1 libsimde-dev_0.7.2-5 libsmartcols1_2.37.2-4 libsqlite3-0_3.36.0-2 libss2_1.46.4-1 libssh2-1_1.10.0-2 libssl1.1_1.1.1l-1 libstdc++-11-dev_11.2.0-10 libstdc++6_11.2.0-10 libsub-override-perl_0.09-2 libsystemd0_249.5-1 libtasn1-6_4.17.0-2 libtinfo6_6.2+20210905-1 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libtsan0_11.2.0-10 libubsan1_11.2.0-10 libuchardet0_0.0.7-1 libudev1_249.5-1 libunistring2_0.9.10-6 libuuid1_2.37.2-4 libuv1_1.42.0-1 libvulkan1_1.2.189.0-2 libx11-6_2:1.7.2-2+b1 libx11-data_2:1.7.2-2 libx11-xcb1_2:1.7.2-2+b1 libxau6_1:1.0.9-1 libxcb-dri2-0_1.14-3 libxcb-dri3-0_1.14-3 libxcb-glx0_1.14-3 libxcb-present0_1.14-3 libxcb-shm0_1.14-3 libxcb-sync1_1.14-3 libxcb-xfixes0_1.14-3 libxcb1_1.14-3 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxfixes3_1:5.0.3-2 libxi6_2:1.8-1 libxml2_2.9.12+dfsg-5 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxtst6_2:1.2.3-1 libxxf86vm1_1:1.1.4-1+b2 libxxhash0_0.8.0-2 libz3-4_4.8.12-1+b1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.14.12-1 login_1:4.8.1-1 logsave_1.46.4-1 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.37.2-4 ncurses-base_6.2+20210905-1 ncurses-bin_6.2+20210905-1 openjdk-11-jdk_11.0.13+8-1 openjdk-11-jdk-headless_11.0.13+8-1 openjdk-11-jre_11.0.13+8-1 openjdk-11-jre-headless_11.0.13+8-1 openssl_1.1.1l-1 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-6 perl-base_5.32.1-6 perl-modules-5.32_5.32.1-6 po-debconf_1.0.21+nmu1 procps_2:3.3.17-5 qt5-qmake_5.15.2+dfsg-12 qt5-qmake-bin_5.15.2+dfsg-12 qtchooser_66-2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.00-1 tar_1.34+dfsg-1 tzdata_2021e-1 ucf_3.0043 util-linux_2.37.2-4 x11-common_1:7.7+23 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: plast Binary: plast, plast-example Architecture: any all Version: 2.3.2+dfsg-7 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://plast.inria.fr/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/plast Vcs-Git: https://salsa.debian.org/med-team/plast.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, libpcre3-dev, default-jdk, libsimde-dev Package-List: plast deb science optional arch=any plast-example deb science optional arch=all Checksums-Sha1: 693e7fd60cb7cd41a9843320e1349a7a23d61671 5726436 plast_2.3.2+dfsg.orig.tar.xz 67032927f1175cd89919cf9be6f77634bd13cf82 20116 plast_2.3.2+dfsg-7.debian.tar.xz Checksums-Sha256: db8bcabc66ecc2555d1aeeba68dfc459dd7977251274c1f793e78da092ee9ff1 5726436 plast_2.3.2+dfsg.orig.tar.xz 057d6e2db2fd6f526f9932f5d229ec1f5682817eb352ff66418d82d670c6118d 20116 plast_2.3.2+dfsg-7.debian.tar.xz Files: db86adecf11d4eb4e75280a4da50ce13 5726436 plast_2.3.2+dfsg.orig.tar.xz 631bfcf258a274f276a8e8ff7b82ba43 20116 plast_2.3.2+dfsg-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmAWhakACgkQPCZ2P2xn 5uJ1Hg/+J/LAODj8U4fruOh3dgOaN7JfMkanTL0gXdfszLCBEatDiNv7hlDCXh+O jE4kyfKB4bg52Jx3uAJxUWKXOcaWEs6mD3MHQrWW2YaPmxZLKxgSRwVN3o3zLO4W bpA4cqxlarbJd4V6Cm/S5Hjkw+28eIaSIwx5MFuEJTFTAfQP3jmof+M2NiqCOyJR DCediXipT26CwAFNG2IKNR0MUx/4QyHe58gGp+AYTCiJS6pyFk7ef2MpiixUO8q1 LvHy1Jc7cdSAq3a5g/JQMXuc5RVkAYtseKuhEBsiui1CL6LV4LdhdLYskEJBN7W9 7Ue+Em9l8Eu9Wbs72nPPQR5ukDsD44lMa1skZ0Gh64UwYAYvIF0BwzONZuJOw846 MMljIVJfyYXPMscuLmgRaVYMJAzBNnSRCDhgOuTAInskxlvilR5b0ybMtlYMjRzE 63R/u514zdI9SlVvs0S2cx3JTckT77sFS57Tz1E+uEG+AlsTUr67SK3fWmjYTHY4 I7KQfTbopJy/k4RQd0QBBg3YoddJZKL5FWaG1SgPqfShFDkTpNtQbl87Rtai78Ce G3Xqfr8TdUTh+apMW6/3CmCHzJF0P90/eF6jorGkfeacSpkbtdrIOUgQnOXpjmaI lb9NDd5tX5sWGBk/o24TAFeG1DM9yEzeU4Af7xf/A0ufXKNMh7o= =dNXF -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.wz1fKvpJ/trustedkeys.kbx': General error gpgv: Signature made Sun Jan 31 10:25:45 2021 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./plast_2.3.2+dfsg-7.dsc dpkg-source: info: extracting plast in /<> dpkg-source: info: unpacking plast_2.3.2+dfsg.orig.tar.xz dpkg-source: info: unpacking plast_2.3.2+dfsg-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_pcre.patch dpkg-source: info: applying adapt_auto_test_script.sh dpkg-source: info: applying no_msse3.patch dpkg-source: info: applying reproducible.patch dpkg-source: info: applying simde.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=sid-amd64-sbuild-3f022f27-e4e2-4446-bc33-3a3713458719 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -b -rfakeroot dpkg-buildpackage: info: source package plast dpkg-buildpackage: info: source version 2.3.2+dfsg-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/<>' set -e ; for SIMD in sse3 ; do \ export CXXFLAGS="-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -m${SIMD}" && export CFLAGS="-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -m${SIMD}" && \ dh_auto_configure --builddirectory=obj-${SIMD} ; \ done cd obj-sse3 && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu .. -- The C compiler identification is Clang 13.0.0 -- The CXX compiler identification is Clang 13.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:6 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found JNI: /usr/lib/jvm/default-java/lib/libjawt.so -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /<>/obj-sse3 dh_auto_configure cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu .. -- The C compiler identification is Clang 13.0.0 -- The CXX compiler identification is Clang 13.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:6 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found JNI: /usr/lib/jvm/default-java/lib/libjawt.so -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /<>/obj-x86_64-linux-gnu make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' set -e ; for SIMD in sse3 ; do \ dh_auto_build --builddirectory=obj-${SIMD} ; \ done cd obj-sse3 && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/<>/obj-sse3' /usr/bin/cmake -S/<> -B/<>/obj-sse3 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-sse3/CMakeFiles /<>/obj-sse3//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/obj-sse3' make -f CMakeFiles/plast.dir/build.make CMakeFiles/plast.dir/depend make -f CMakeFiles/PlastLibrary.dir/build.make CMakeFiles/PlastLibrary.dir/depend make[4]: Entering directory '/<>/obj-sse3' cd /<>/obj-sse3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-sse3 /<>/obj-sse3 /<>/obj-sse3/CMakeFiles/plast.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/obj-sse3' cd /<>/obj-sse3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-sse3 /<>/obj-sse3 /<>/obj-sse3/CMakeFiles/PlastLibrary.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/obj-sse3' make -f CMakeFiles/plast.dir/build.make CMakeFiles/plast.dir/build make[4]: Leaving directory '/<>/obj-sse3' make -f CMakeFiles/PlastLibrary.dir/build.make CMakeFiles/PlastLibrary.dir/build make[4]: Entering directory '/<>/obj-sse3' make[4]: Entering directory '/<>/obj-sse3' [ 0%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o [ 0%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o [ 1%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o [ 1%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/AlgorithmPlastn.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -c /<>/src/algo/core/impl/AbstractAlgorithm.cpp /usr/bin/c++ -D__LINUX__ 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/<>/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp [ 7%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o -c /<>/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp [ 8%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/core/impl/DefaultAlgoConfig.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 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CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o -c /<>/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp [ 24%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o -c /<>/src/alignment/visitors/impl/ReverseStrandVisitor.cpp [ 24%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o -c /<>/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp [ 25%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o -c /<>/src/alignment/visitors/impl/SortContainerVisitor.cpp [ 25%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o -c /<>/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp [ 26%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o -c /<>/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp [ 26%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o -c /<>/src/alignment/visitors/impl/XmlOutputVisitor.cpp [ 27%] Building CXX object CMakeFiles/plast.dir/src/database/impl/AbstractSequenceIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/AbstractSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/AbstractSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/AbstractSequenceIterator.cpp.o -c /<>/src/database/impl/AbstractSequenceIterator.cpp [ 27%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BasicSequenceBuilder.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BasicSequenceBuilder.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BasicSequenceBuilder.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BasicSequenceBuilder.cpp.o -c /<>/src/database/impl/BasicSequenceBuilder.cpp [ 27%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o -c /<>/src/algo/hits/hsp/HspExtensionCmd.cpp /<>/src/alignment/visitors/impl/XmlOutputVisitor.cpp:203:26: warning: object backing the pointer will be destroyed at the end of the full-expression [-Wdangling-gsl] const char * seqId = _currentSubject->getIdentifier().c_str(); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 27%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o -c /<>/src/database/impl/BlastdbAsn1HeaderDecoder.cpp [ 28%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o -c /<>/src/database/impl/BlastdbDatabaseQuickReader.cpp 1 warning generated. [ 28%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -c /<>/src/database/impl/BlastdbFileIndexReader.cpp [ 28%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbSequenceIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BlastdbSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BlastdbSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BlastdbSequenceIterator.cpp.o -c /<>/src/database/impl/BlastdbSequenceIterator.cpp [ 28%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o -c /<>/src/algo/hits/hsp/HspGeneratorCmd.cpp [ 29%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o -c /<>/src/database/impl/BufferedCachedSequenceDatabase.cpp [ 29%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -c /<>/src/database/impl/BufferedSequenceDatabase.cpp [ 30%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIterator.cpp.o -c /<>/src/algo/hits/seed/SeedHitIterator.cpp [ 30%] Building CXX object CMakeFiles/plast.dir/src/database/impl/CompositeSequenceDatabase.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/CompositeSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -c /<>/src/database/impl/CompositeSequenceDatabase.cpp [ 31%] Building CXX object CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o -c /<>/src/database/impl/DefaultAlphabet.cpp [ 31%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -c /<>/src/database/impl/FastaDatabaseQuickReader.cpp [ 32%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o -c /<>/src/database/impl/FastaSequenceIterator.cpp [ 32%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o -c /<>/src/algo/hits/seed/SeedHitIteratorCached.cpp /<>/src/database/impl/FastaDatabaseQuickReader.cpp:200:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&magic, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:211:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&len, sizeof(size_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:215:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (buffer, sizeof(char), len, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:231:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_totalSize, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:234:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_dataSize, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:237:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_nbSequences, sizeof(u_int32_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:240:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_dbKind, sizeof(DatabaseKind_e), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:243:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_maxblocksize, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:247:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&nbOffsets, sizeof(size_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:253:13: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&offset, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:373:31: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] u_int64_t magic = 0; fread (&magic, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 32%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o -c /<>/src/database/impl/FastaSequenceOutput.cpp 11 warnings generated. [ 32%] Building CXX object CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -c /<>/src/database/impl/ReadingFrameSequenceDatabase.cpp [ 33%] Building CXX object CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -c /<>/src/database/impl/ReadingFrameSequenceIterator.cpp [ 33%] Building CXX object CMakeFiles/plast.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -c /<>/src/database/impl/ReverseStrandSequenceIterator.cpp [ 33%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o -c /<>/src/algo/hits/ungap/UngapExtendHitIterator.cpp [ 33%] Building CXX object CMakeFiles/plast.dir/src/database/impl/Sequence.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/Sequence.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/Sequence.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/Sequence.cpp.o -c /<>/src/database/impl/Sequence.cpp [ 34%] Building CXX object CMakeFiles/plast.dir/src/database/impl/SequenceTokenizer.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 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34%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/CommandDispatcher.cpp.o [ 35%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/CommandDispatcher.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/CommandDispatcher.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/CommandDispatcher.cpp.o -c /<>/src/designpattern/impl/CommandDispatcher.cpp /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIterator.cpp.o -c /<>/src/algo/hits/ungap/UngapHitIterator.cpp [ 36%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/ConfigFileProperties.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/ConfigFileProperties.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/ConfigFileProperties.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/ConfigFileProperties.cpp.o -c /<>/src/designpattern/impl/ConfigFileProperties.cpp [ 36%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/DirectoryIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/DirectoryIterator.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/DirectoryIterator.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/DirectoryIterator.cpp.o -c /<>/src/designpattern/impl/DirectoryIterator.cpp [ 36%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/FileLineIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/FileLineIterator.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/FileLineIterator.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/FileLineIterator.cpp.o -c /<>/src/designpattern/impl/FileLineIterator.cpp [ 36%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o -c /<>/src/algo/hits/ungap/UngapHitIteratorNull.cpp [ 37%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/Observer.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/Observer.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/Observer.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/Observer.cpp.o -c /<>/src/designpattern/impl/Observer.cpp [ 37%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/Property.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/Property.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/Property.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/Property.cpp.o -c /<>/src/designpattern/impl/Property.cpp [ 38%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/SystemCommand.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/SystemCommand.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/SystemCommand.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/SystemCommand.cpp.o -c /<>/src/designpattern/impl/SystemCommand.cpp [ 38%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/TokenizerIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/TokenizerIterator.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/TokenizerIterator.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/TokenizerIterator.cpp.o -c /<>/src/designpattern/impl/TokenizerIterator.cpp [ 38%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp.o -c /<>/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp /<>/src/designpattern/impl/SystemCommand.cpp:119:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] system (tmp); ^~~~~~ ~~~ 1 warning generated. [ 38%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/WrapperIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/WrapperIterator.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/WrapperIterator.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/WrapperIterator.cpp.o -c /<>/src/designpattern/impl/WrapperIterator.cpp [ 39%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/XmlReader.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/XmlReader.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/XmlReader.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/XmlReader.cpp.o -c /<>/src/designpattern/impl/XmlReader.cpp [ 39%] Building CXX object CMakeFiles/plast.dir/src/index/impl/AbstractDatabaseIndex.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/index/impl/AbstractDatabaseIndex.cpp.o -MF CMakeFiles/plast.dir/src/index/impl/AbstractDatabaseIndex.cpp.o.d -o CMakeFiles/plast.dir/src/index/impl/AbstractDatabaseIndex.cpp.o -c /<>/src/index/impl/AbstractDatabaseIndex.cpp [ 40%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o -c /<>/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp [ 40%] Building CXX object CMakeFiles/plast.dir/src/index/impl/DatabaseIndex.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include 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CMakeFiles/plast.dir/src/index/impl/DatabaseIndexHash.cpp.o.d -o CMakeFiles/plast.dir/src/index/impl/DatabaseIndexHash.cpp.o -c /<>/src/index/impl/DatabaseIndexHash.cpp [ 41%] Building CXX object CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o -MF CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o.d -o CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o -c /<>/src/index/impl/DatabaseNucleotidIndex.cpp [ 41%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/Statistics.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ 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-MD -MT CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o -MF CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o.d -o CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o -c /<>/src/index/impl/DatabaseNucleotidIndexOptim.cpp [ 42%] Building C object CMakeFiles/plast.dir/src/index/impl/retrievall.c.o /usr/bin/cc -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/index/impl/retrievall.c.o -MF CMakeFiles/plast.dir/src/index/impl/retrievall.c.o.d -o CMakeFiles/plast.dir/src/index/impl/retrievall.c.o -c /<>/src/index/impl/retrievall.c [ 42%] Building CXX object CMakeFiles/plast.dir/src/launcher/core/PlastCmd.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/core/PlastCmd.cpp.o -MF CMakeFiles/plast.dir/src/launcher/core/PlastCmd.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/core/PlastCmd.cpp.o -c /<>/src/launcher/core/PlastCmd.cpp [ 43%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o -c /<>/src/algo/stats/impl/StatisticsPlastn.cpp [ 43%] Building CXX object CMakeFiles/plast.dir/src/launcher/core/PlastOptionsParser.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/core/PlastOptionsParser.cpp.o -MF CMakeFiles/plast.dir/src/launcher/core/PlastOptionsParser.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/core/PlastOptionsParser.cpp.o -c /<>/src/launcher/core/PlastOptionsParser.cpp [ 44%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/Helper.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/Helper.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/Helper.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/Helper.cpp.o -c /<>/src/launcher/jni/Helper.cpp /<>/src/algo/stats/impl/StatisticsPlastn.cpp:415:2: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register double innerSum; ^~~~~~~~~ 1 warning generated. [ 44%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/Wrapper.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/Wrapper.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/Wrapper.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/Wrapper.cpp.o -c /<>/src/launcher/jni/Wrapper.cpp [ 44%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsSpouge.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 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CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.cpp [ 45%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp [ 45%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o -c /<>/src/alignment/core/impl/AbstractAlignmentContainer.cpp [ 45%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp [ 46%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp [ 46%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp [ 47%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/Alignment.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/Alignment.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/Alignment.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/Alignment.cpp.o -c /<>/src/alignment/core/impl/Alignment.cpp [ 47%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp:316:1: warning: non-void function does not return a value in all control paths [-Wreturn-type] } ^ [ 48%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o -c /<>/src/launcher/observers/AbstractProgressionObserver.cpp [ 48%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o -c /<>/src/alignment/core/impl/AlignmentContainerFactory.cpp 1 warning generated. [ 48%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o -c /<>/src/launcher/observers/AlgoExecutionObserver.cpp [ 48%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o -c /<>/src/launcher/observers/AlgoHitsResultObserver.cpp [ 49%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/AlgoResultObserver.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/AlgoResultObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/AlgoResultObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/AlgoResultObserver.cpp.o -c /<>/src/launcher/observers/AlgoResultObserver.cpp [ 49%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/BargraphObserver.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/BargraphObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/BargraphObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/BargraphObserver.cpp.o -c /<>/src/launcher/observers/BargraphObserver.cpp [ 49%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o -c /<>/src/alignment/core/impl/BasicAlignmentContainer.cpp /<>/src/launcher/observers/BargraphObserver.cpp:83:35: warning: 'size' argument to memset is '0'; did you mean to transpose the last two arguments? [-Wmemset-transposed-args] memset (_output, _actualSize, 0); ^ /<>/src/launcher/observers/BargraphObserver.cpp:83:35: note: parenthesize the third argument to silence [ 49%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/FileProgressionObserver.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/FileProgressionObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/FileProgressionObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/FileProgressionObserver.cpp.o -c /<>/src/launcher/observers/FileProgressionObserver.cpp 1 warning generated. [ 50%] Building CXX object CMakeFiles/plast.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o -MF CMakeFiles/plast.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o.d -o CMakeFiles/plast.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o -c /<>/src/misc/api/CompleteSubjectDatabaseStats.cpp [ 50%] Building CXX object CMakeFiles/plast.dir/src/misc/impl/ObsfucatedString.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/misc/impl/ObsfucatedString.cpp.o -MF CMakeFiles/plast.dir/src/misc/impl/ObsfucatedString.cpp.o.d -o CMakeFiles/plast.dir/src/misc/impl/ObsfucatedString.cpp.o -c /<>/src/misc/impl/ObsfucatedString.cpp /<>/src/launcher/observers/FileProgressionObserver.cpp:259:17: warning: format specifies type 'long long' but the argument has type 'unsigned long' [-Wformat] _nbAlignments - _lastNbAlign, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/launcher/observers/FileProgressionObserver.cpp:260:17: warning: format specifies type 'long long' but the argument has type 'u_int64_t' (aka 'unsigned long') [-Wformat] _nbAlignments, ^~~~~~~~~~~~~ /<>/src/launcher/observers/FileProgressionObserver.cpp:265:17: warning: format specifies type 'long long' but the argument has type 'u_int64_t' (aka 'unsigned long') [-Wformat] _maxUsedMemory, ^~~~~~~~~~~~~~ /<>/src/launcher/observers/FileProgressionObserver.cpp:266:17: warning: format specifies type 'long long' but the argument has type 'u_int64_t' (aka 'unsigned long') [-Wformat] _totalUsedMemory ^~~~~~~~~~~~~~~~ [ 51%] Building CXX object CMakeFiles/plast.dir/src/misc/impl/OptionsParser.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/misc/impl/OptionsParser.cpp.o -MF CMakeFiles/plast.dir/src/misc/impl/OptionsParser.cpp.o.d -o CMakeFiles/plast.dir/src/misc/impl/OptionsParser.cpp.o -c /<>/src/misc/impl/OptionsParser.cpp 4 warnings generated. [ 51%] Building CXX object CMakeFiles/plast.dir/src/misc/impl/RangeTree.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/misc/impl/RangeTree.cpp.o -MF CMakeFiles/plast.dir/src/misc/impl/RangeTree.cpp.o.d -o CMakeFiles/plast.dir/src/misc/impl/RangeTree.cpp.o -c /<>/src/misc/impl/RangeTree.cpp [ 51%] Building CXX object CMakeFiles/plast.dir/src/os/impl/DefaultOsFactory.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/DefaultOsFactory.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/DefaultOsFactory.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/DefaultOsFactory.cpp.o -c /<>/src/os/impl/DefaultOsFactory.cpp [ 52%] Building CXX object CMakeFiles/plast.dir/src/os/impl/LinuxFile.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/LinuxFile.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/LinuxFile.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/LinuxFile.cpp.o -c /<>/src/os/impl/LinuxFile.cpp [ 53%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/HspContainer.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/HspContainer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/HspContainer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/HspContainer.cpp.o -c /<>/src/alignment/core/impl/HspContainer.cpp /<>/src/os/impl/LinuxFile.cpp:42:13: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] system (ss.str().c_str()); ^~~~~~ ~~~~~~~~~~~~~~~~ [ 53%] Building CXX object CMakeFiles/plast.dir/src/os/impl/LinuxMemory.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/LinuxMemory.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/LinuxMemory.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/LinuxMemory.cpp.o -c /<>/src/os/impl/LinuxMemory.cpp 1 warning generated. [ 53%] Building CXX object CMakeFiles/plast.dir/src/os/impl/LinuxMemoryFile.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/LinuxMemoryFile.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/LinuxMemoryFile.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/LinuxMemoryFile.cpp.o -c /<>/src/os/impl/LinuxMemoryFile.cpp [ 54%] Building CXX object CMakeFiles/plast.dir/src/os/impl/LinuxThread.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/LinuxThread.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/LinuxThread.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/LinuxThread.cpp.o -c /<>/src/os/impl/LinuxThread.cpp /<>/src/os/impl/LinuxMemory.cpp:46:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fgets (buffer, sizeof(buffer), file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. [ 54%] Building CXX object CMakeFiles/plast.dir/src/os/impl/LinuxTime.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/LinuxTime.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/LinuxTime.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/LinuxTime.cpp.o -c /<>/src/os/impl/LinuxTime.cpp [ 54%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o -c /<>/src/alignment/core/impl/ReaderAlignmentContainer.cpp [ 54%] Building CXX object CMakeFiles/plast.dir/src/os/impl/MacOsFile.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/MacOsFile.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/MacOsFile.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/MacOsFile.cpp.o -c /<>/src/os/impl/MacOsFile.cpp [ 55%] Building CXX object CMakeFiles/plast.dir/src/os/impl/MacOsMemory.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/MacOsMemory.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/MacOsMemory.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/MacOsMemory.cpp.o -c /<>/src/os/impl/MacOsMemory.cpp [ 55%] Building CXX object CMakeFiles/plast.dir/src/os/impl/MacOsMemoryFile.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 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-D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/MacOsTime.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/MacOsTime.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/MacOsTime.cpp.o -c /<>/src/os/impl/MacOsTime.cpp [ 56%] Building CXX object CMakeFiles/plast.dir/src/os/impl/WindowsFile.cpp.o /usr/bin/c++ -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/WindowsFile.cpp.o -MF 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-I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/AbstractSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/AbstractSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/AbstractSequenceIterator.cpp.o -c /<>/src/database/impl/AbstractSequenceIterator.cpp [ 71%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BasicSequenceBuilder.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BasicSequenceBuilder.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BasicSequenceBuilder.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BasicSequenceBuilder.cpp.o -c /<>/src/database/impl/BasicSequenceBuilder.cpp [ 71%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o -c /<>/src/database/impl/BlastdbAsn1HeaderDecoder.cpp /<>/src/alignment/visitors/impl/XmlOutputVisitor.cpp:203:26: warning: object backing the pointer will be destroyed at the end of the full-expression [-Wdangling-gsl] const char * seqId = _currentSubject->getIdentifier().c_str(); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o -c /<>/src/database/impl/BlastdbDatabaseQuickReader.cpp 1 warning generated. [ 72%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbFileIndexReader.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbFileIndexReader.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -c /<>/src/database/impl/BlastdbFileIndexReader.cpp [ 72%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbSequenceIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbSequenceIterator.cpp.o -c /<>/src/database/impl/BlastdbSequenceIterator.cpp [ 73%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o -c /<>/src/database/impl/BufferedCachedSequenceDatabase.cpp [ 73%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedSequenceDatabase.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedSequenceDatabase.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -c /<>/src/database/impl/BufferedSequenceDatabase.cpp [ 73%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -c /<>/src/database/impl/CompositeSequenceDatabase.cpp [ 74%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o -c /<>/src/database/impl/DefaultAlphabet.cpp [ 74%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -c /<>/src/database/impl/FastaDatabaseQuickReader.cpp [ 75%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceIterator.cpp.o -c /<>/src/database/impl/FastaSequenceIterator.cpp /<>/src/database/impl/FastaDatabaseQuickReader.cpp:200:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&magic, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:211:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&len, sizeof(size_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:215:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (buffer, sizeof(char), len, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:231:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_totalSize, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:234:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_dataSize, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:237:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_nbSequences, sizeof(u_int32_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:240:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_dbKind, sizeof(DatabaseKind_e), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:243:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&_maxblocksize, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:247:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&nbOffsets, sizeof(size_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:253:13: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fread (&offset, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/database/impl/FastaDatabaseQuickReader.cpp:373:31: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] u_int64_t magic = 0; fread (&magic, sizeof(u_int64_t), 1, file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o -c /<>/src/database/impl/FastaSequenceOutput.cpp [ 75%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -c /<>/src/database/impl/ReadingFrameSequenceDatabase.cpp 11 warnings generated. [ 76%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -c /<>/src/database/impl/ReadingFrameSequenceIterator.cpp [ 76%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -c /<>/src/database/impl/ReverseStrandSequenceIterator.cpp [ 76%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o -c /<>/src/database/impl/Sequence.cpp [ 77%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/SequenceTokenizer.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/SequenceTokenizer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/SequenceTokenizer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/SequenceTokenizer.cpp.o -c /<>/src/database/impl/SequenceTokenizer.cpp [ 77%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/StringSequenceIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/StringSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/StringSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/StringSequenceIterator.cpp.o -c /<>/src/database/impl/StringSequenceIterator.cpp [ 77%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/CommandDispatcher.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/CommandDispatcher.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/CommandDispatcher.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/CommandDispatcher.cpp.o -c /<>/src/designpattern/impl/CommandDispatcher.cpp [ 78%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/ConfigFileProperties.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/ConfigFileProperties.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/ConfigFileProperties.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/ConfigFileProperties.cpp.o -c /<>/src/designpattern/impl/ConfigFileProperties.cpp [ 78%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/DirectoryIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/DirectoryIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/DirectoryIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/DirectoryIterator.cpp.o -c /<>/src/designpattern/impl/DirectoryIterator.cpp [ 78%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o -c /<>/src/designpattern/impl/FileLineIterator.cpp [ 79%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o -c /<>/src/designpattern/impl/Observer.cpp [ 79%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Property.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Property.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Property.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Property.cpp.o -c /<>/src/designpattern/impl/Property.cpp [ 80%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/SystemCommand.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/SystemCommand.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/SystemCommand.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/SystemCommand.cpp.o -c /<>/src/designpattern/impl/SystemCommand.cpp [ 80%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/TokenizerIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/TokenizerIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/TokenizerIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/TokenizerIterator.cpp.o -c /<>/src/designpattern/impl/TokenizerIterator.cpp [ 80%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/WrapperIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/WrapperIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/WrapperIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/WrapperIterator.cpp.o -c /<>/src/designpattern/impl/WrapperIterator.cpp /<>/src/designpattern/impl/SystemCommand.cpp:119:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] system (tmp); ^~~~~~ ~~~ 1 warning generated. [ 81%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/XmlReader.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/XmlReader.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/XmlReader.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/XmlReader.cpp.o -c /<>/src/designpattern/impl/XmlReader.cpp [ 81%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/AbstractDatabaseIndex.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. 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/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o -c /<>/src/index/impl/DatabaseNucleotidIndex.cpp [ 82%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o -c /<>/src/index/impl/DatabaseNucleotidIndexOptim.cpp [ 83%] Building C object CMakeFiles/PlastLibrary.dir/src/index/impl/retrievall.c.o /usr/bin/cc -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/retrievall.c.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/retrievall.c.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/retrievall.c.o -c /<>/src/index/impl/retrievall.c [ 83%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastCmd.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastCmd.cpp.o -c /<>/src/launcher/core/PlastCmd.cpp [ 83%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastOptionsParser.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastOptionsParser.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastOptionsParser.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastOptionsParser.cpp.o -c /<>/src/launcher/core/PlastOptionsParser.cpp [ 84%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/jni/Helper.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/jni/Helper.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/jni/Helper.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/jni/Helper.cpp.o -c /<>/src/launcher/jni/Helper.cpp [ 84%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/jni/Wrapper.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/jni/Wrapper.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/jni/Wrapper.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/jni/Wrapper.cpp.o -c /<>/src/launcher/jni/Wrapper.cpp [ 85%] Building CXX object 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-I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp [ 85%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o [ 86%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 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CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp [ 86%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o -c /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp [ 87%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o -c /<>/src/launcher/observers/AbstractProgressionObserver.cpp /<>/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp:316:1: warning: non-void function does not return a value in all control paths [-Wreturn-type] } ^ [ 87%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o -c /<>/src/launcher/observers/AlgoExecutionObserver.cpp 1 warning generated. [ 87%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o -c /<>/src/launcher/observers/AlgoHitsResultObserver.cpp [ 88%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoResultObserver.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoResultObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoResultObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoResultObserver.cpp.o -c /<>/src/launcher/observers/AlgoResultObserver.cpp [ 88%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/BargraphObserver.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/BargraphObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/BargraphObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/BargraphObserver.cpp.o -c /<>/src/launcher/observers/BargraphObserver.cpp [ 88%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/FileProgressionObserver.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/FileProgressionObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/FileProgressionObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/FileProgressionObserver.cpp.o -c /<>/src/launcher/observers/FileProgressionObserver.cpp /<>/src/launcher/observers/BargraphObserver.cpp:83:35: warning: 'size' argument to memset is '0'; did you mean to transpose the last two arguments? [-Wmemset-transposed-args] memset (_output, _actualSize, 0); ^ /<>/src/launcher/observers/BargraphObserver.cpp:83:35: note: parenthesize the third argument to silence 1 warning generated. [ 89%] Building CXX object CMakeFiles/PlastLibrary.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o -c /<>/src/misc/api/CompleteSubjectDatabaseStats.cpp [ 89%] Building CXX object CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o -c /<>/src/misc/impl/ObsfucatedString.cpp [ 90%] Building CXX object CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o -c /<>/src/misc/impl/OptionsParser.cpp /<>/src/launcher/observers/FileProgressionObserver.cpp:259:17: warning: format specifies type 'long long' but the argument has type 'unsigned long' [-Wformat] _nbAlignments - _lastNbAlign, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/launcher/observers/FileProgressionObserver.cpp:260:17: warning: format specifies type 'long long' but the argument has type 'u_int64_t' (aka 'unsigned long') [-Wformat] _nbAlignments, ^~~~~~~~~~~~~ /<>/src/launcher/observers/FileProgressionObserver.cpp:265:17: warning: format specifies type 'long long' but the argument has type 'u_int64_t' (aka 'unsigned long') [-Wformat] _maxUsedMemory, ^~~~~~~~~~~~~~ /<>/src/launcher/observers/FileProgressionObserver.cpp:266:17: warning: format specifies type 'long long' but the argument has type 'u_int64_t' (aka 'unsigned long') [-Wformat] _totalUsedMemory ^~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o -c /<>/src/misc/impl/RangeTree.cpp [ 90%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o -c /<>/src/os/impl/DefaultOsFactory.cpp 4 warnings generated. [ 91%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o -c /<>/src/os/impl/LinuxFile.cpp [ 91%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o -c /<>/src/os/impl/LinuxMemory.cpp [ 91%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o -c /<>/src/os/impl/LinuxMemoryFile.cpp /<>/src/os/impl/LinuxFile.cpp:42:13: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] system (ss.str().c_str()); ^~~~~~ ~~~~~~~~~~~~~~~~ [ 92%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxThread.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxThread.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxThread.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxThread.cpp.o -c /<>/src/os/impl/LinuxThread.cpp /<>/src/os/impl/LinuxMemory.cpp:46:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fgets (buffer, sizeof(buffer), file); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. [ 92%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxTime.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxTime.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxTime.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxTime.cpp.o -c /<>/src/os/impl/LinuxTime.cpp 1 warning generated. [ 92%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsFile.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsFile.cpp.o -c /<>/src/os/impl/MacOsFile.cpp [ 93%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemory.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemory.cpp.o -c /<>/src/os/impl/MacOsMemory.cpp [ 93%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemoryFile.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemoryFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemoryFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemoryFile.cpp.o -c /<>/src/os/impl/MacOsMemoryFile.cpp [ 93%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsThread.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsThread.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsThread.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsThread.cpp.o -c /<>/src/os/impl/MacOsThread.cpp [ 94%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o -c /<>/src/os/impl/MacOsTime.cpp [ 94%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o -c /<>/src/os/impl/WindowsFile.cpp [ 95%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o -c /<>/src/os/impl/WindowsMemory.cpp [ 95%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o [ 95%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemoryFile.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemoryFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemoryFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemoryFile.cpp.o -c /<>/src/os/impl/WindowsMemoryFile.cpp /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o -c /<>/src/os/impl/WindowsThread.cpp [ 96%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<>/obj-sse3/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o -c /<>/src/os/impl/WindowsTime.cpp [ 96%] Building CXX object 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CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxThread.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxTime.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemory.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemoryFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsThread.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemoryFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/ZlibFile.cpp.o CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedIterator.cpp.o CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o CMakeFiles/PlastLibrary.dir/src/seed/impl/BasicSeedModel.cpp.o CMakeFiles/PlastLibrary.dir/src/seed/impl/SubSeedModel.cpp.o CMakeFiles/PlastLibrary.dir/src/seg/impl/DustMasker.cpp.o CMakeFiles/PlastLibrary.dir/src/seg/impl/dust.c.o CMakeFiles/PlastLibrary.dir/src/seg/impl/genwin.c.o CMakeFiles/PlastLibrary.dir/src/seg/impl/seg.c.o CMakeFiles/PlastLibrary.dir/src/tools/PlastCmd.cpp.o make[4]: Leaving directory '/<>/obj-sse3' [100%] Built target PlastLibrary make[3]: Leaving directory '/<>/obj-sse3' make[2]: *** [Makefile:139: all] Error 2 make[2]: Leaving directory '/<>/obj-sse3' dh_auto_build: error: cd obj-sse3 && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2 make[1]: *** [debian/rules:36: override_dh_auto_build-arch] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:17: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2021-10-26T21:47:56Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: 86528 Build-Time: 61 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 38 Job: plast_2.3.2+dfsg-7 Machine Architecture: amd64 Package: plast Package-Time: 120 Source-Version: 2.3.2+dfsg-7 Space: 86528 Status: attempted Version: 2.3.2+dfsg-7 -------------------------------------------------------------------------------- Finished at 2021-10-26T21:47:56Z Build needed 00:02:00, 86528k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 121.135413579s DC-Time-Estimation: 121.135413579 versus expected 308 (r/m: 1.5426090595640216 ; m: 121.135413579)